CsGy2G005440 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G005440
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Ubiquitin-like protein
Location	Gy14Chr2: 3737338 .. 3740115 (-)
RNA-Seq Expression	CsGy2G005440
Synteny	CsGy2G005440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGTACTTCACATCTATCTATATATCCAGCTGTGTTTAAATTTGAGTGATTCAGACCTTAACCTTGCTACTATACTTTTATTATCATTTTTCTGATTAAACTGGTTTAGTTTATAAGTATAGAGAACTCAAAGCAGGCCTGCAAAATTAATGTTGTTTATTTGTTCTCATCACGAGCAAGTAGCTGTCCTTATTATCTATAACCTTGTAATTATGTACCATTGTATCCATATATTCTTTATTGTCAATGTTTCTTCTAAGCATCAAGGCATAGATTCAACGCGAAATCATTGCACAAGCATGGTGTGTAATGTTGTGTTGGCTAGAACACCTAATGTGTTCTTGTATTCTTGTAAGCATTAATTAAACTGTGTAACAAAACTTTTAACACTTGGTATAAGAGAGGCCAGTTTGATGGTCTAACTGGGAAACTCAATGGCCGCAATGTACACGACAACATGGTGGAGACTATCTTTTGCTACTTTTCCAATAACTCACTTTCATGGTTAATCAGTATGAAGGTGGAGATTATTTCAAAGCAGGATTTATTTTCATCCTACTTGACCAGAAGTTTTATTTTCTCGAAAGACCAAACATCTTTAAAAAAATTATTTAAAAATAAGAAGTACACGCCTTTCTGTGGTTTTGTGATCATATACAATTCACTGCCTCAGAGTTCAGCTTCTTGTTTCAAGTTTGGAAAAAAAAATGCTCTCCTCTCTCCTCCCCTGTGCAGTTCACAACATCTAGTTGTAGAGCTTTATGCAGTGCGCTTTGTCATTACTCTTCTTTCATCGATTTTGTCTAGGCATGCTTTGTAATCTCCATTTGGGGAGAGGACAAATATCTCCTTGGCCTTTGGGTTTTGTGATTATATGTTGAGAAATCAAATATTGACACAATTTTGACCCGGGAAGGATATCAGTAAGCTCTAATTTTTTTATTCTAAGATCGGCCTACCTTTTCTTCCCACTGAGCTACTTGGTCATGATTAGCTGCTGTAGGTGCTTGATGATTTTAATAGGAATATGGTTGACAAAACTTGGTATTTTTGTTCTCTCAACAATTTATAGTGGCTTTTAGAATATAGTAGGAAAATCCAAGGGCATGGAGAATCCAGTTAAGGAATTCATGATGCCACTTTAGTTTGCCCCTTCTCTTGGATTTGACACATACATCTAGATTTTTTCTGACATTTATTCTTACTCATCTTTTGAGGGATCAATTCTACATTTGTTTGCATTTCGTAAGCTTTGTGCCTGTAATCTTTTCTTTGGCTGGTATTGATTGAGTTTTAGTCGCACTATAGCAAACCAAAATATATAAACTGGCTCTTTTCATAAAATGTTATACCATTTGGACGTGATATAAATGCCTTCAATTGGTTTTCAACTTCCATTTGACTGTCTCTATTCATTATGTTTTTTGTGCCATATTTGCATACAATAGGCAATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGTGATCCAATTGAGACAACTTTAAATATCAAGCAAAAATTAGAGTCCCTTATTGACCAACCAGTAGTTGACCAGCGCTTGATCCTAATGGGGAGTGGGGAAGTATTGGAGGATTCAAAGACACTGGCTGATCAGAAGGTAGGTCTTCAATACATTTATTTATTACATTCGGTGATCAGTTATCAGATTTTCTGGAAATATTAAGGTTATGAAAATACAATGGCTACAATTCTGATAACATTTTCTATATATTTTCAGGTTGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAGGTTTTTCCCTACCACCTCCCACAATCTTTTTGTGAACTTCTTGTTCTAGTACTTCTTTTTAGAAGCCTGTCTTCTGATCAAGAACTGAGAGTTATTTATGTGCTTGTACTTGGATTTGGAGTCTTTTTACAGTTATGGTCTTCGTTGTCATTGGATCTGGATTCGGAATATGAAACTAATAGGAACGGTATTGAGGTGTTATTATTAAGAGGGCATTTGGCTCATTGTATGAAGTTAATAAGTCTGAGATTAATATGTTGGATTTAGTAAGTTTGTGTTTGGGTGTAGAGTTGTAAGATTGAGTTCCTCAATAATTGTGAAAAGTAAATTAAGAAAGTAAGATAGAGTTATTTGATCAATGTGAAAAGTAGAGATCGGAAAATTGAGTTATTTGGTAAATGTGGGTGGTATAAAAAACATATAGAAAGATAAAGTTACTCGATAAATTGAGTTGTTAAGCCTAACATTCGTTGAGAGTGTATTAGATAGGGAGGTTATTATGATATTTGGTTATCAATACAGAGTAAGAAGAAATGAGTAGTTTGGCAAAATTTTAGTGAGTGAATCAAAGACTTGAGAGACGTCTCACAAGGGAGGTTTTTAAGTTCCTCGAATTACTCGGTATACTGTCATCCTTTCCCTTTTTAATCCAACCCCTCCCCCCTCCCTCCCTCCTTTTTTGGCTTCTCTATTATTCTAGAGGTACAATTTTCCTGTACTTTGAGTTTTACATCAACAAATTAACAAAGAAGCTTGTCTCCTTTTCAAAAAGAAAAGTTTCTCGAATTACTTTTTATTTCAATATAGTTGGTTGTGTTTTGGTTCCTATAAAAAAAATGTTTTCTCATTGCATGTTTTCTTGATATAACATGCGATTTTTCCCTTTCTTTGTGTAGATGATAATGACTTCGAGGAAATCAACATTGTCCATCCAGACGATTTCTACCAATCACCGATTCTGGCGGTTGGTAAGGACTAA

mRNA sequence

ATGGCAATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGTGATCCAATTGAGACAACTTTAAATATCAAGCAAAAATTAGAGTCCCTTATTGACCAACCAGTAGTTGACCAGCGCTTGATCCTAATGGGGAGTGGGGAAGTATTGGAGGATTCAAAGACACTGGCTGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAGATGATAATGACTTCGAGGAAATCAACATTGTCCATCCAGACGATTTCTACCAATCACCGATTCTGGCGGTTGGTAAGGACTAA

Coding sequence (CDS)

ATGGCAATGTATATCCGAATCAAGCGCCATAAGACAACCTACTTTATCCAGTGTGATCCAATTGAGACAACTTTAAATATCAAGCAAAAATTAGAGTCCCTTATTGACCAACCAGTAGTTGACCAGCGCTTGATCCTAATGGGGAGTGGGGAAGTATTGGAGGATTCAAAGACACTGGCTGATCAGAAGGTTGAAAATGATGCAGTTGTGGCTCTAACGTTGCGAAAAGATGATAATGACTTCGAGGAAATCAACATTGTCCATCCAGACGATTTCTACCAATCACCGATTCTGGCGGTTGGTAAGGACTAA

Protein sequence

MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQKVENDAVVALTLRKDDNDFEEINIVHPDDFYQSPILAVGKD*

Homology

[Close]

BLAST of CsGy2G005440 vs. ExPASy Swiss-Prot
Match: P16709 (viral Ubiquitin OS=Autographa californica nuclear polyhedrosis virus OX=46015 GN=vUbi PE=1 SV=2)

HSP 1 Score: 44.7 bits (104), Expect = 7.6e-04
Identity = 27/75 (36.00%), Postives = 44/75 (58.67%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60
          M ++I+    K T   + +P ET  ++KQK+      PV  QRLI   +G+ LEDSKT+A
Sbjct: 1  MQIFIKTLTGK-TITAETEPAETVADLKQKIADKEGVPVDQQRLIF--AGKQLEDSKTMA 60

Query: 61 DQKVENDAVVALTLR 76
          D  ++ ++ + + LR
Sbjct: 61 DYNIQKESTLHMVLR 72

[Close]

BLAST of CsGy2G005440 vs. NCBI nr
Match: NP_001267513.1 (transcription elongation factor B polypeptide 2-like [Cucumis sativus] >AAL35978.1 ubiquitin-like protein [Cucumis sativus] >KGN61062.1 hypothetical protein Csa_021254 [Cucumis sativus])

HSP 1 Score: 205 bits (522), Expect = 1.36e-66
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNDFEEINIVHPDDFYQSPILAVGKD 103
           DQKVENDAVVALTLRKDDNDFEEINIVHPDDFYQSPILAVGKD
Sbjct: 61  DQKVENDAVVALTLRKDDNDFEEINIVHPDDFYQSPILAVGKD 103

[Close]

BLAST of CsGy2G005440 vs. NCBI nr
Match: XP_008452565.1 (PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo])

HSP 1 Score: 185 bits (469), Expect = 1.66e-58
Identity = 93/95 (97.89%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60
          MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA
Sbjct: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61 DQKVENDAVVALTLRKDDNDFEEINIVHPDDFYQS 95
          DQKVENDAVVALTLRK+DNDFEEINIVHP+DFYQS
Sbjct: 61 DQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQS 95

[Close]

BLAST of CsGy2G005440 vs. NCBI nr
Match: KAA0056118.1 (Ubiquitin [Cucumis melo var. makuwa] >TYJ96399.1 Ubiquitin [Cucumis melo var. makuwa])

HSP 1 Score: 181 bits (459), Expect = 5.23e-57
Identity = 91/93 (97.85%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 3  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQ 62
          MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQ
Sbjct: 1  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQ 60

Query: 63 KVENDAVVALTLRKDDNDFEEINIVHPDDFYQS 95
          KVENDAVVALTLRK+DNDFEEINIVHP+DFYQS
Sbjct: 61 KVENDAVVALTLRKEDNDFEEINIVHPNDFYQS 93

[Close]

BLAST of CsGy2G005440 vs. NCBI nr
Match: XP_038889494.1 (uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida])

HSP 1 Score: 180 bits (457), Expect = 1.12e-56
Identity = 91/102 (89.22%), Postives = 95/102 (93.14%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLIL+GSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILVGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNDFEEINIVHPDDFYQSPILAVGK 102
           DQKVENDAVVALTLRKDDNDFEEI+I+ P+DFYQS     G 
Sbjct: 61  DQKVENDAVVALTLRKDDNDFEEIDIIQPNDFYQSRDADAGN 102

[Close]

BLAST of CsGy2G005440 vs. NCBI nr
Match: XP_016901017.1 (PREDICTED: uncharacterized protein LOC103493547 isoform X2 [Cucumis melo])

HSP 1 Score: 180 bits (456), Expect = 1.55e-56
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60
          MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA
Sbjct: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61 DQKVENDAVVALTLRKDDNDFEEINIVHPDDFYQS 95
          DQKVENDAVVALTLRKD NDFEEINIVHP+DFYQS
Sbjct: 61 DQKVENDAVVALTLRKD-NDFEEINIVHPNDFYQS 94

[Close]

BLAST of CsGy2G005440 vs. ExPASy TrEMBL
Match: Q8VWY0 (Ubiquitin-like protein OS=Cucumis sativus OX=3659 GN=UBI-1 PE=2 SV=1)

HSP 1 Score: 205 bits (522), Expect = 6.60e-67
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60
           MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA
Sbjct: 1   MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61  DQKVENDAVVALTLRKDDNDFEEINIVHPDDFYQSPILAVGKD 103
           DQKVENDAVVALTLRKDDNDFEEINIVHPDDFYQSPILAVGKD
Sbjct: 61  DQKVENDAVVALTLRKDDNDFEEINIVHPDDFYQSPILAVGKD 103

[Close]

BLAST of CsGy2G005440 vs. ExPASy TrEMBL
Match: A0A1S3BTJ1 (uncharacterized protein LOC103493547 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493547 PE=4 SV=1)

HSP 1 Score: 185 bits (469), Expect = 8.04e-59
Identity = 93/95 (97.89%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60
          MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA
Sbjct: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61 DQKVENDAVVALTLRKDDNDFEEINIVHPDDFYQS 95
          DQKVENDAVVALTLRK+DNDFEEINIVHP+DFYQS
Sbjct: 61 DQKVENDAVVALTLRKEDNDFEEINIVHPNDFYQS 95

[Close]

BLAST of CsGy2G005440 vs. ExPASy TrEMBL
Match: A0A5A7UM04 (Ubiquitin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00260 PE=4 SV=1)

HSP 1 Score: 181 bits (459), Expect = 2.53e-57
Identity = 91/93 (97.85%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 3  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQ 62
          MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQ
Sbjct: 1  MYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLADQ 60

Query: 63 KVENDAVVALTLRKDDNDFEEINIVHPDDFYQS 95
          KVENDAVVALTLRK+DNDFEEINIVHP+DFYQS
Sbjct: 61 KVENDAVVALTLRKEDNDFEEINIVHPNDFYQS 93

[Close]

BLAST of CsGy2G005440 vs. ExPASy TrEMBL
Match: A0A1S4DYF9 (uncharacterized protein LOC103493547 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493547 PE=4 SV=1)

HSP 1 Score: 180 bits (456), Expect = 7.49e-57
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60
          MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA
Sbjct: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60

Query: 61 DQKVENDAVVALTLRKDDNDFEEINIVHPDDFYQS 95
          DQKVENDAVVALTLRKD NDFEEINIVHP+DFYQS
Sbjct: 61 DQKVENDAVVALTLRKD-NDFEEINIVHPNDFYQS 94

[Close]

BLAST of CsGy2G005440 vs. ExPASy TrEMBL
Match: A0A6J1HY58 (uncharacterized protein LOC111468551 OS=Cucurbita maxima OX=3661 GN=LOC111468551 PE=4 SV=1)

HSP 1 Score: 174 bits (442), Expect = 1.06e-54
Identity = 88/95 (92.63%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60
          MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQP+VDQRLIL+GSGEVLEDSKTLA
Sbjct: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPIVDQRLILVGSGEVLEDSKTLA 60

Query: 61 DQKVENDAVVALTLRKDDNDFEEINIVHPDDFYQS 95
          DQKVENDAVVALTLRKDDN+FEEI+IV  +DFYQS
Sbjct: 61 DQKVENDAVVALTLRKDDNEFEEIDIVSTNDFYQS 95

[Close]

BLAST of CsGy2G005440 vs. TAIR 10
Match: AT5G57860.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 4.2e-34
Identity = 69/92 (75.00%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60
          MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QPV +QRL+LM + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVENDAVVALTLRKDDNDFEEINIVHPDDF 93
          DQKVENDAVVALTL+KDDN+FE++NI  P DF
Sbjct: 61 DQKVENDAVVALTLKKDDNEFEDVNIAQPTDF 92

[Close]

BLAST of CsGy2G005440 vs. TAIR 10
Match: AT5G57860.3 (Ubiquitin-like superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 4.2e-34
Identity = 69/92 (75.00%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60
          MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QPV +QRL+LM + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVENDAVVALTLRKDDNDFEEINIVHPDDF 93
          DQKVENDAVVALTL+KDDN+FE++NI  P DF
Sbjct: 61 DQKVENDAVVALTLKKDDNEFEDVNIAQPTDF 92

[Close]

BLAST of CsGy2G005440 vs. TAIR 10
Match: AT5G57860.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 4.2e-34
Identity = 69/92 (75.00%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60
          MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QPV +QRL+LM + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVENDAVVALTLRKDDNDFEEINIVHPDDF 93
          DQKVENDAVVALTL+KDDN+FE++NI  P DF
Sbjct: 61 DQKVENDAVVALTLKKDDNEFEDVNIAQPTDF 92

[Close]

BLAST of CsGy2G005440 vs. TAIR 10
Match: AT5G57860.4 (Ubiquitin-like superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 7.0e-21
Identity = 48/66 (72.73%), Postives = 58/66 (87.88%), Query Frame = 0


Query: 1  MAMYIRIKRHKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTLA 60
          MAMYIR+KR KTTYFIQCDP ET L++KQKL +LI+QPV +QRL+LM + EVLEDSK+LA
Sbjct: 1  MAMYIRVKRMKTTYFIQCDPTETVLDVKQKLFALIEQPVNNQRLVLMSTEEVLEDSKSLA 60

Query: 61 DQKVEN 67
          DQKV +
Sbjct: 61 DQKVSH 66

[Close]

BLAST of CsGy2G005440 vs. TAIR 10
Match: AT5G37640.1 (ubiquitin 9 )

HSP 1 Score: 42.7 bits (99), Expect = 2.0e-04
Identity = 27/76 (35.53%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 1  MAMYIRIKR-HKTTYFIQCDPIETTLNIKQKLESLIDQPVVDQRLILMGSGEVLEDSKTL 60
          M+M I  K   + T  I     +T  N+K K++ +   P+  QRLI   SG++L+D +TL
Sbjct: 1  MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIF--SGKLLDDGRTL 60

Query: 61 ADQKVENDAVVALTLR 76
          AD  ++ D+++ L LR
Sbjct: 61 ADYSIQKDSILHLALR 74

The following BLAST results are available for this feature:

BLAST of CsGy2G005440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P16709	7.6e-04	36.00	viral Ubiquitin OS=Autographa californica nuclear polyhedrosis virus OX=46015 GN...	[more]

BLAST of CsGy2G005440 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001267513.1	1.36e-66	100.00	transcription elongation factor B polypeptide 2-like [Cucumis sativus] >AAL35978...	[more]
XP_008452565.1	1.66e-58	97.89	PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo]	[more]
KAA0056118.1	5.23e-57	97.85	Ubiquitin [Cucumis melo var. makuwa] >TYJ96399.1 Ubiquitin [Cucumis melo var. ma...	[more]
XP_038889494.1	1.12e-56	89.22	uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida]	[more]
XP_016901017.1	1.55e-56	97.89	PREDICTED: uncharacterized protein LOC103493547 isoform X2 [Cucumis melo]	[more]

BLAST of CsGy2G005440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q8VWY0	6.60e-67	100.00	Ubiquitin-like protein OS=Cucumis sativus OX=3659 GN=UBI-1 PE=2 SV=1	[more]
A0A1S3BTJ1	8.04e-59	97.89	uncharacterized protein LOC103493547 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UM04	2.53e-57	97.85	Ubiquitin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00260 PE=4...	[more]
A0A1S4DYF9	7.49e-57	97.89	uncharacterized protein LOC103493547 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1HY58	1.06e-54	92.63	uncharacterized protein LOC111468551 OS=Cucurbita maxima OX=3661 GN=LOC111468551...	[more]

BLAST of CsGy2G005440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57860.1	4.2e-34	75.00	Ubiquitin-like superfamily protein	[more]
AT5G57860.3	4.2e-34	75.00	Ubiquitin-like superfamily protein	[more]
AT5G57860.2	4.2e-34	75.00	Ubiquitin-like superfamily protein	[more]
AT5G57860.4	7.0e-21	72.73	Ubiquitin-like superfamily protein	[more]
AT5G37640.1	2.0e-04	35.53	ubiquitin 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 3..75 e-value: 1.1E-10 score: 51.5
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 5..76 e-value: 1.1E-10 score: 41.1
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..79 score: 15.42708
None	No IPR available	GENE3D	3.10.20.90		coord: 1..92 e-value: 2.6E-19 score: 71.1
None	No IPR available	PANTHER	PTHR47725	OS03G0364000 PROTEIN	coord: 1..95
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G005440.2	CsGy2G005440.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding