CsGy2G004875 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G004875
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	homeobox protein knotted-1-like 1
Location	Gy14Chr2: 3352944 .. 3357002 (-)
RNA-Seq Expression	CsGy2G004875
Synteny	CsGy2G004875

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGTGCCTCACACTGCGATATTATAGTGGAGCCTTGATGAGGAAATCTTGCGAAATCATAGCATACTACTTTGTAACATCAAAATGAGATTTAAAATAAACGATAAGACAATAATATTCTCTACGTTGTAAGCAGAAAGTTTTTAACCTTGAGTCACTTCACATGTATTTTGTATAAAAATCTCTAATACAAACTGAGTTCCAATTATTAAATTATAACAAAGAAAAGTTGAAAAATTTTATACTCTTACTACGGTCATACTTTTACCATCCAGTATTAAACACATCATCAGTTTACATACCATGTTATACGATGAATGAAGATGGCATGATATACATATATAATATATATAATATATATTTTCAGCAAAAGGGTTTGTTAAATATTCAACAAAAAGAAGCCTACAAACACTCCATGTTAAGTTCAGAATGAGAATTATGACAAAAATGGAATCCCCCCCTTAAATTTAGCTGGCTGATAACAATATTTCTTAGTATCATCATTATTATATCAGTATCTTCTTTTTCTTTTTTTCTTTTTTTTTTCCCCTTTTTATAACCTAAACTTTCCTCTCACTTAACAGTCATGATTCCAGTTTCTCTCTAGGGGTTTTTTAAAGTTTAAGATAGAGAAAAATTCAACCTTTCAAGCTTAGGAATTTTGAGGAAATGGAAGAGTTTTACAGGCTTAACAACCCTGTTATAACCTCATATTCTAATGGTGTTGTTGGAAGTGAAGCCATTGCAAGTACAAGCTGTGGAGAGATTCATGAAGCTTTAATGGTGGATGATGATATGCTTCAGCTTGAGGCTGAGGTTACAACTGGTTTGAACATGTCTGACATGATCAAAACTCAAATTGTCAACCATCCCCTTTATCCCAAACTTGTTTCTGCTTACATTGAATGCCAAAAAGTTTGTAAATTTTCTTGTTTTTACCCATCTCTTTATGAATCATGTGTTTAGGTGCGTTTGAGGTTGTTACGTTCTTTAATGTTGATGTGTTTTTTAAGGTTGGAGCTCCACCACAAGTGGCTTCTCTTCTTGAAGAAATTGGTCGTGAAAATCACCCTTCTAGATCCTCTATTGAGTTGGGAGCTGATCCTCAACTAGACAACTTCATGGTACTTTTTGTTTGTTTGTTTGCTTTAATTTCCTGTTGTAATTTTCTGGGTCTTTAGAAACATTCTTGACAAGAAAATCAAAAAACAACTTGTACTTTAGATCTGCAAGTTGGGAACTATGTTTTATTTTAGTTTCTAAACTACTAGATTAATGTTGCTTTTCCACTTACAAGACTAACGACAGTTAAAAACCGTCAACTGCTCGAGTTTAGATCGATACCAAAAAGCTTAGTTGACAAAGACTAGTGATGGCGGAAACTGTTAAGGGATTTGAATCATTGCACTATCATTTGTTTTTGTTAATGTTCTAATGTTGCTGTTTTCATTAAGGTGCTTATGATAATGTACAAGAAACCATCAACGGCTCAACCTTAGATTAATACGGGACATCTTAATTTGACAAAGACTAATGGGGGTAAAAACTGTCAAGGAATTGAGATCATTGAACTAACAACAGTTACAAACTGCCTACGGCTCGATCCTAGTTTGATATGGGATAGGTCAATTGGCAGAGACTAACGATGGTGAAACCAATTCGAATCATTGCACTATCAATTGTCTGTGTTAATGATCTAATGTTGCAGTTTTCATTAGGGTAGTTATAAATTCTTACAGGAGTAATGACGGTTAAAAACTGTCAACAGCTAGACCTTAGTTCAATATGGAGAATCTTAGTTGACAAAGACTAATGGTGGTGAAAACCGCAAGAGATTCGAATCATTGCACTCTCAATTGTCTTTGTCAGTGATATATTGTTGCAGTTTTCGTGTTCATTTCCATTATGGTTCTTCTGATTAATTTATGTATGGAAAACTGAACTTGTTTGAAGTTTGAAGCATGGAAATAATATATTCTTGTTTTCTGTTTTTCTTTGATTGAAAATTGAGTTCTTTCTGACTTTCTCCTTGTTTGTTTTCTTCTGAAGGAATCATATTGTGAGGTTCTTCATCAATATAAGAATGAGCTATCCAAACCATTTGATGAAGCAACTATGTTCTTGACCAACATTGAATTGGAGCTAAGCAATTTGTGTAAAGGATCGTTTACCATGATGTCGGATTCTCGCTCCGCCATGAATGGTACTTTCTTCTTCCATTTATTTATTTCTACTTTGCAATCAGTGCCCCATCTGATAACGATTTCATTTTCGGTTTCTGTTTTTGAAAGTTATGCTTGTTACTATACATCAAATCTTTTTGTTAAGTTTTTTTTACCTTCATTCAAAATGTATTTGAATTATAAACCAAATTTACAAACAAAAATCCAAGTTCTTAAAACTACTTTCTTTATTCTCAGAATCCGATTGTCTTTTCATTGAAAAACGTTTTTGAAAGGCATTACGAAAAAGGTAGATGAGAGTAGTGCTTGTAGGTTTATTTTCAATAAAGGAAAACAGAATGGCAATGCAATAGGCCTAAGGAAAAGAATAGTTTGTAAGAATTCAATATATCAATACAATGATTCGAAGGAGCGTTCGATATCGTTTTTTGAGTAGATATCAAGAACATCTGGAAGTTGAAGCAAAGCCATAGCAGAAAGTTGTTTGCAACTTGGTTCCTTAAGCTTTGACAGTCATTTATAAACATTTTGATGCCAAAAGTTGTCTATGAATGTGATATAACTGTTCCCAACTTACCTCTATATTCTTCATTCTCCTCCTGTTCCTCTCTCTCTCTCTTCTGATCTACATGTTTGTAGATGAAGTATCCGGGACTCCAGAGGAAGAACCAAGCAGCTACGAGGAGGTGGAAATGCCGAGGAATCACGAGCCGTTCTGCATACGAAAAACAAACCAAGACCTCAAAGAAATGCTGCTGAAGAAATACAGTGGCTATCTCAGCAGTTTGAAAAAGGAATTCTTGAAGAAAAGAAAGAAAGAAAAGCTACCAAAAGATGCAAGAATGGCTTTACTTGACTGGTGGAATACTCATTACAAATGGCCTTATCCTACAGTAAATTTCCTCTCTTCTCAATTCAAAAACATTGCATAATCAAAAAGGAAAATAAAACCAACTTGATAACTTCTTCTATTTGTTTTCTTTTATAGATAATTACAACGGTTAATACTTTGAGAACTAACAATTACGTGTATCTAGTGACTATTTTGTGAAGAAATGCAATTATAGCAAATCATATCGTTGATAGTATTCAATTAGCGATATGGTTCTATAAACTATAGACTCTTAAAGTTTACTCTGAAGTTTGCTATATTTACAAATTCTCTTATATATTATGCTATCTTTTACAAATATTTTAGGACTAATCGTTATATTTACAATTGTTCGGTTTTGTTATTGGTTTGACAGGAAGAGGAAAAATCAAAACTATCTGTTACTACTGGTCTAGACCAAAAGCAAATTAATAACTGGTTCATAAACCAGAGAAAGCGACATTGGAAGCCACCCGAAGACATGCGATTTGTGCTCATGGACGGAGTCGGGGCCGGGGAATGCATGAAAGGATCAAATTTTTATGACAATGGAGAAACTGGAAGCCATGTAATTTGACATATTGATTTAGGTTCTTGTCTAGTTTCACAAATTTTAGCTGCTTTTGAGTTTCTTTGTGTACATTTTCTCTTCTTCCTTTTTTCCCCCCTTCTTTGGTTAGACTTGGAATCGCTTTTTAAGTTAGACAGAAACACATGAGTATATAGATATTACTTTTGTTCATGTGCAATGACAAAAGATTATCATCAAATTTGAGGAATATTTGTATAACGAGGTACTATCAATTTTTCAAACGTAAAAAGTACTTTTTCTGAAAATTATTATTTGTGTTAGTGCTGAAAAGTTTAAGTTCATGATTTTTCACTTTAGAAGTGAGATGTTTGAATTTTCTTACCCCTCGTCGTTATTGTATGCATACTAATGGTAATGTTTTTGTAGGGAATTGTTGAAAGTTGAGAGAGATTTGAAATAAAGTATGAAGTTTAG

mRNA sequence

AGGTGCCTCACACTGCGATATTATAGTGGAGCCTTGATGAGGAAATCTTGCGAAATCATAGCATACTACTTTGTAACATCAAAATGAGATTTAAAATAAACGATAAGACAATAATATTCTCTACGTTGTAAGCAGAAAGTTTTTAACCTTGAGTCACTTCACATGTATTTTGTATAAAAATCTCTAATACAAACTGAGTTCCAATTATTAAATTATAACAAAGAAAAGTTGAAAAATTTTATACTCTTACTACGGTCATACTTTTACCATCCAGTATTAAACACATCATCAGTTTACATACCATGTTATACGATGAATGAAGATGGCATGATATACATATATAATATATATAATATATATTTTCAGCAAAAGGGTTTGTTAAATATTCAACAAAAAGAAGCCTACAAACACTCCATGTTAAGTTCAGAATGAGAATTATGACAAAAATGGAATCCCCCCCTTAAATTTAGCTGGCTGATAACAATATTTCTTAGTATCATCATTATTATATCAGTATCTTCTTTTTCTTTTTTTCTTTTTTTTTTCCCCTTTTTATAACCTAAACTTTCCTCTCACTTAACAGTCATGATTCCAGTTTCTCTCTAGGGGTTTTTTAAAGTTTAAGATAGAGAAAAATTCAACCTTTCAAGCTTAGGAATTTTGAGGAAATGGAAGAGTTTTACAGGCTTAACAACCCTGTTATAACCTCATATTCTAATGGTGTTGTTGGAAGTGAAGCCATTGCAAGTACAAGCTGTGGAGAGATTCATGAAGCTTTAATGGTGGATGATGATATGCTTCAGCTTGAGGCTGAGGTTACAACTGGTTTGAACATGTCTGACATGATCAAAACTCAAATTGTCAACCATCCCCTTTATCCCAAACTTGTTTCTGCTTACATTGAATGCCAAAAAGTTGGAGCTCCACCACAAGTGGCTTCTCTTCTTGAAGAAATTGGTCGTGAAAATCACCCTTCTAGATCCTCTATTGAGTTGGGAGCTGATCCTCAACTAGACAACTTCATGGAATCATATTGTGAGGTTCTTCATCAATATAAGAATGAGCTATCCAAACCATTTGATGAAGCAACTATGTTCTTGACCAACATTGAATTGGAGCTAAGCAATTTGTGTAAAGGATCGTTTACCATGATGTCGGATTCTCGCTCCGCCATGAATGATGAAGTATCCGGGACTCCAGAGGAAGAACCAAGCAGCTACGAGGAGGTGGAAATGCCGAGGAATCACGAGCCGTTCTGCATACGAAAAACAAACCAAGACCTCAAAGAAATGCTGCTGAAGAAATACAGTGGCTATCTCAGCAGTTTGAAAAAGGAATTCTTGAAGAAAAGAAAGAAAGAAAAGCTACCAAAAGATGCAAGAATGGCTTTACTTGACTGGTGGAATACTCATTACAAATGGCCTTATCCTACAGAAGAGGAAAAATCAAAACTATCTGTTACTACTGGTCTAGACCAAAAGCAAATTAATAACTGGTTCATAAACCAGAGAAAGCGACATTGGAAGCCACCCGAAGACATGCGATTTGTGCTCATGGACGGAGTCGGGGCCGGGGAATGCATGAAAGGATCAAATTTTTATGACAATGGAGAAACTGGAAGCCATGTAATTTGACATATTGATTTAGGTTCTTGTCTAGTTTCACAAATTTTAGCTGCTTTTGAGTTTCTTTGTGTACATTTTCTCTTCTTCCTTTTTTCCCCCCTTCTTTGGTTAGACTTGGAATCGCTTTTTAAGTTAGACAGAAACACATGAGTATATAGATATTACTTTTGTTCATGTGCAATGACAAAAGATTATCATCAAATTTGAGGAATATTTGTATAACGAGGTACTATCAATTTTTCAAACGTAAAAAGTACTTTTTCTGAAAATTATTATTTGTGTTAGTGCTGAAAAGTTTAAGTTCATGATTTTTCACTTTAGAAGTGAGATGTTTGAATTTTCTTACCCCTCGTCGTTATTGTATGCATACTAATGGTAATGTTTTTGTAGGGAATTGTTGAAAGTTGAGAGAGATTTGAAATAAAGTATGAAGTTTAG

Coding sequence (CDS)

ATGGAAGAGTTTTACAGGCTTAACAACCCTGTTATAACCTCATATTCTAATGGTGTTGTTGGAAGTGAAGCCATTGCAAGTACAAGCTGTGGAGAGATTCATGAAGCTTTAATGGTGGATGATGATATGCTTCAGCTTGAGGCTGAGGTTACAACTGGTTTGAACATGTCTGACATGATCAAAACTCAAATTGTCAACCATCCCCTTTATCCCAAACTTGTTTCTGCTTACATTGAATGCCAAAAAGTTGGAGCTCCACCACAAGTGGCTTCTCTTCTTGAAGAAATTGGTCGTGAAAATCACCCTTCTAGATCCTCTATTGAGTTGGGAGCTGATCCTCAACTAGACAACTTCATGGAATCATATTGTGAGGTTCTTCATCAATATAAGAATGAGCTATCCAAACCATTTGATGAAGCAACTATGTTCTTGACCAACATTGAATTGGAGCTAAGCAATTTGTGTAAAGGATCGTTTACCATGATGTCGGATTCTCGCTCCGCCATGAATGATGAAGTATCCGGGACTCCAGAGGAAGAACCAAGCAGCTACGAGGAGGTGGAAATGCCGAGGAATCACGAGCCGTTCTGCATACGAAAAACAAACCAAGACCTCAAAGAAATGCTGCTGAAGAAATACAGTGGCTATCTCAGCAGTTTGAAAAAGGAATTCTTGAAGAAAAGAAAGAAAGAAAAGCTACCAAAAGATGCAAGAATGGCTTTACTTGACTGGTGGAATACTCATTACAAATGGCCTTATCCTACAGAAGAGGAAAAATCAAAACTATCTGTTACTACTGGTCTAGACCAAAAGCAAATTAATAACTGGTTCATAAACCAGAGAAAGCGACATTGGAAGCCACCCGAAGACATGCGATTTGTGCTCATGGACGGAGTCGGGGCCGGGGAATGCATGAAAGGATCAAATTTTTATGACAATGGAGAAACTGGAAGCCATGTAATTTGA

Protein sequence

MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMIKTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFMESYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEEPSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVGAGECMKGSNFYDNGETGSHVI*

Homology

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BLAST of CsGy2G004875 vs. ExPASy Swiss-Prot
Match: A2Y007 (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica OX=39946 GN=OSH71 PE=2 SV=2)

HSP 1 Score: 298.5 bits (763), Expect = 9.0e-80
Identity = 151/276 (54.71%), Postives = 192/276 (69.57%), Query Frame = 0


Query: 48  AEVTTGLNMSDMIKTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENH----PS 107
           A      ++++++K QI  HP YP L+SAYIEC+KVGAPP+V +LLEEIGRE       +
Sbjct: 43  ATTAAAADLTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGA 102

Query: 108 RSSIELGADPQLDNFMESYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMS 167
            +  E+G DP+LD FME+YC VL +YK EL++PFDEA  FLT I  +L++LC G+     
Sbjct: 103 TAGGEIGLDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTD 162

Query: 168 DSRSAMNDEVSGTPEEEPSS--YEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLK 227
           +S     DE+ G+ E+EP S   +  +  + H     R  + +LKEMLLKKYSG LS L+
Sbjct: 163 NS-----DEMVGSSEDEPCSGDADAADFGQEHSS---RLADHELKEMLLKKYSGCLSRLR 222

Query: 228 KEFLKKRKKEKLPKDARMALLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQR 287
            EFLKKRKK KLPKDAR AL+DWWNTHY+WPYPTEE+K +L+  TGLD KQINNWFINQR
Sbjct: 223 SEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQR 282

Query: 288 KRHWKPPEDMRFVLMDGVGAGECMKGSNFYDNGETG 318
           KRHWKP EDMRF LM+GV  G     + ++D G  G
Sbjct: 283 KRHWKPSEDMRFALMEGVTGGSSSGTTLYFDTGTIG 310

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BLAST of CsGy2G004875 vs. ExPASy Swiss-Prot
Match: Q7GDL5 (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH71 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 9.0e-80
Identity = 151/276 (54.71%), Postives = 192/276 (69.57%), Query Frame = 0


Query: 48  AEVTTGLNMSDMIKTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENH----PS 107
           A      ++++++K QI  HP YP L+SAYIEC+KVGAPP+V +LLEEIGRE       +
Sbjct: 43  ATTAAAADLTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVTTLLEEIGREGRGGGGGA 102

Query: 108 RSSIELGADPQLDNFMESYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMS 167
            +  E+G DP+LD FME+YC VL +YK EL++PFDEA  FLT I  +L++LC G+     
Sbjct: 103 TAGGEIGLDPELDEFMETYCRVLERYKEELTRPFDEAASFLTGIHTQLASLCGGAPPPTD 162

Query: 168 DSRSAMNDEVSGTPEEEPSS--YEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLK 227
           +S     DE+ G+ E+EP S   +  +  + H     R  + +LKEMLLKKYSG LS L+
Sbjct: 163 NS-----DEMVGSSEDEPCSGDADAADFGQEHSS---RLADHELKEMLLKKYSGCLSRLR 222

Query: 228 KEFLKKRKKEKLPKDARMALLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQR 287
            EFLKKRKK KLPKDAR AL+DWWNTHY+WPYPTEE+K +L+  TGLD KQINNWFINQR
Sbjct: 223 SEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQR 282

Query: 288 KRHWKPPEDMRFVLMDGVGAGECMKGSNFYDNGETG 318
           KRHWKP EDMRF LM+GV  G     + ++D G  G
Sbjct: 283 KRHWKPSEDMRFALMEGVTGGSSSGTTLYFDTGTIG 310

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BLAST of CsGy2G004875 vs. ExPASy Swiss-Prot
Match: Q9FP29 (Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH6 PE=2 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 6.5e-78
Identity = 151/267 (56.55%), Postives = 193/267 (72.28%), Query Frame = 0


Query: 55  NMSDMIKTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHP---SRSSIELGA 114
           ++++++K QI  HP YP L+SAYIEC+KVGAPP+VASLL+EIGRE         + ++G 
Sbjct: 38  DLTELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLLKEIGRERRAGGGGGGAGQIGV 97

Query: 115 DPQLDNFMESYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMND 174
           DP+LD FME+YC VL +YK ELS+PFDEA  FL++I+ +LSNLC G+ T    + +  +D
Sbjct: 98  DPELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSGA-TSPPATTATHSD 157

Query: 175 EVSGTPEEEPSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKE 234
           E+ G+ +E+  S  E +M    +    R  + +LKEMLLKKYSG LS L+ EFLKKRKK 
Sbjct: 158 EMVGSSDEDQCS-GETDMLDIGQEQSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKG 217

Query: 235 KLPKDARMALLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDM 294
           KLPKDAR ALL+WWNTHY+WPYPTEE+K +L+  TGLD KQINNWFINQRKRHWKP + M
Sbjct: 218 KLPKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKRHWKPSDGM 277

Query: 295 RFVLMDGVGAGECMKGSNFY-DNGETG 318
           RF LM+GV  G    G+  Y D G  G
Sbjct: 278 RFALMEGVAGGS--SGTTLYFDTGTIG 300

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BLAST of CsGy2G004875 vs. ExPASy Swiss-Prot
Match: P46640 (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 SV=3)

HSP 1 Score: 261.9 bits (668), Expect = 9.4e-69
Identity = 134/289 (46.37%), Postives = 191/289 (66.09%), Query Frame = 0


Query: 13  TSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMIKTQIVNHPLYPK 72
           T  +  + GS+ +A+    E+   +   +D   L            +IK++I +HPLYP+
Sbjct: 33  TGDNQRLFGSDELATALSSELLPRIRKAEDNFSL-----------SVIKSKIASHPLYPR 92

Query: 73  LVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIE----LGADPQLDNFMESYCEVLHQ 132
           L+  YI+CQKVGAP ++A +LEEI RENH  +  +      GADP+LD FME+YC++L +
Sbjct: 93  LLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCFGADPELDEFMETYCDILVK 152

Query: 133 YKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEEPSSYEEVE 192
           YK +L++PFDEAT F+  IE++L NLC G       S +A++D+ + + +EE    +++ 
Sbjct: 153 YKTDLARPFDEATTFINKIEMQLQNLCTG-----PASATALSDDGAVSSDEELREDDDIA 212

Query: 193 MPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLDWWNTH 252
              + +    R  ++DLK+ LL+K+  ++SSLK EF KK+KK KLP++AR ALLDWWN H
Sbjct: 213 ADDSQQ----RSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVH 272

Query: 253 YKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMD 298
            KWPYPTE +K  L+  TGLDQKQINNWFINQRKRHWKP E+M F +MD
Sbjct: 273 NKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMD 301

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BLAST of CsGy2G004875 vs. ExPASy Swiss-Prot
Match: Q84JS6 (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.8e-67
Identity = 131/243 (53.91%), Postives = 169/243 (69.55%), Query Frame = 0


Query: 59  MIKTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIE----LGADPQ 118
           +IK +I  HP YP+L+ AYI+CQKVGAPP++A LLEEI RE+   +  +      GADP+
Sbjct: 84  VIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQEVVPSSCFGADPE 143

Query: 119 LDNFMESYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVS 178
           LD FME+YC++L +YK++L++PFDEAT FL  IE++L NLC G    +  +R    D V 
Sbjct: 144 LDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTG----VESARGVSEDGVI 203

Query: 179 GTPEEEPSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLP 238
            + EE      EV      E    R  ++DLK+ LL+K+   +S+LK EF KK+KK KLP
Sbjct: 204 SSDEELSGGDHEVA-----EDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLP 263

Query: 239 KDARMALLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFV 298
           ++AR ALLDWWN HYKWPYPTE +K  L+  TGLDQKQINNWFINQRKRHWKP E+M F 
Sbjct: 264 REARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPFA 317

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BLAST of CsGy2G004875 vs. NCBI nr
Match: XP_004144749.1 (homeobox protein knotted-1-like 1 [Cucumis sativus] >KGN61003.1 hypothetical protein Csa_021166 [Cucumis sativus])

HSP 1 Score: 659 bits (1701), Expect = 3.85e-239
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60
           MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI
Sbjct: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60

Query: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120
           KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME
Sbjct: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEE 180
           SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEE 180

Query: 181 PSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240
           PSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA
Sbjct: 181 PSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300
           LLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG
Sbjct: 241 LLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300

Query: 301 AGECMKGSNFYDNGETGSHVI 321
           AGECMKGSNFYDNGETGSHVI
Sbjct: 301 AGECMKGSNFYDNGETGSHVI 321

[Close]

BLAST of CsGy2G004875 vs. NCBI nr
Match: XP_008453416.1 (PREDICTED: homeobox protein knotted-1-like 1 isoform X1 [Cucumis melo] >KAA0048072.1 homeobox protein knotted-1-like 1 isoform X1 [Cucumis melo var. makuwa] >TYJ96464.1 homeobox protein knotted-1-like 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 655 bits (1689), Expect = 2.60e-237
Identity = 318/321 (99.07%), Postives = 319/321 (99.38%), Query Frame = 0


Query: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60
           MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI
Sbjct: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60

Query: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120
           KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME
Sbjct: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEE 180
           SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMM DSRSAMNDEVSGTPEEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMLDSRSAMNDEVSGTPEEE 180

Query: 181 PSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240
           PSSYEEVEMPRNHEPFC RKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA
Sbjct: 181 PSSYEEVEMPRNHEPFCTRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300
           LLDWWNTHYKWPYPTEEEKSKLS+TTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG
Sbjct: 241 LLDWWNTHYKWPYPTEEEKSKLSITTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300

Query: 301 AGECMKGSNFYDNGETGSHVI 321
           AGECMKGSNFYDNGETGSHVI
Sbjct: 301 AGECMKGSNFYDNGETGSHVI 321

[Close]

BLAST of CsGy2G004875 vs. NCBI nr
Match: XP_038889741.1 (homeobox protein knotted-1-like 1 [Benincasa hispida])

HSP 1 Score: 610 bits (1573), Expect = 1.25e-219
Identity = 295/321 (91.90%), Postives = 303/321 (94.39%), Query Frame = 0


Query: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60
           MEEFYRLNN VI SYSN VVG EAIASTSCG IHEALMVDDDML LEAE TTG NMS+MI
Sbjct: 1   MEEFYRLNNSVIASYSNSVVGGEAIASTSCGGIHEALMVDDDMLHLEAEATTGSNMSNMI 60

Query: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120
           KTQIVNHPLYPKLVSAY+ECQKVGAPPQVASLLEEIGRENHP RSSIELGADPQLDNFME
Sbjct: 61  KTQIVNHPLYPKLVSAYVECQKVGAPPQVASLLEEIGRENHPPRSSIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEE 180
           SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFT+ SDS S MNDEV+GTPEEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTVTSDSHSTMNDEVAGTPEEE 180

Query: 181 PSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240
           PSSY +V+MP NHE FC+RKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA
Sbjct: 181 PSSYGQVKMPGNHESFCMRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300
           LLDWWNTHYKWPYPTEEEKSKLSV TGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG
Sbjct: 241 LLDWWNTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300

Query: 301 AGECMKGSNFYDNGETGSHVI 321
            GEC+KGSNFYDNGETG HVI
Sbjct: 301 VGECIKGSNFYDNGETGGHVI 321

[Close]

BLAST of CsGy2G004875 vs. NCBI nr
Match: KAG6599184.1 (Homeobox protein knotted-1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 569 bits (1467), Expect = 1.48e-203
Identity = 277/313 (88.50%), Postives = 292/313 (93.29%), Query Frame = 0


Query: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60
           M+EFYRLNNPV++SYSNGV+G EAIASTSCG+IHEALMVDD++L LEAE TTGLNMSDMI
Sbjct: 1   MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMI 60

Query: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120
           KTQI+NHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRS IELGADPQLDNFME
Sbjct: 61  KTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSCIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEE 180
           SYCEVLHQYKNELSKPFDEA MFLTNIELELSNLCKGSFT  S+SRSA+NDEV+GTPEEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAINDEVAGTPEEE 180

Query: 181 PSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240
           PSSY EVE   NHEPF  RKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA
Sbjct: 181 PSSYGEVETTGNHEPFSTRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300
           LL+WW+THYKWPYPTEEEKSKLSV TGLDQKQINNWFINQRKRHWKPPEDMRF+LMDG G
Sbjct: 241 LLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG 300

Query: 301 AG----ECMKGSN 309
            G    EC+KG N
Sbjct: 301 VGDGDGECIKGLN 313

[Close]

BLAST of CsGy2G004875 vs. NCBI nr
Match: XP_023545300.1 (homeobox protein knotted-1-like 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 566 bits (1458), Expect = 3.49e-202
Identity = 276/313 (88.18%), Postives = 290/313 (92.65%), Query Frame = 0


Query: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60
           M+EFYRLNNPV+ SYSNGV+G EAIASTSCG+IHEALMVDD++L LEAE TTGLNMSDMI
Sbjct: 1   MDEFYRLNNPVMASYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMI 60

Query: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120
           KTQI+NHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRS IELGADPQLDNFME
Sbjct: 61  KTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSCIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEE 180
           SYCEVLHQYKNELSKPFDEA MFLTNIELELSNLCKGSFT  S+SRS +NDEV+ TPEEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSVINDEVAKTPEEE 180

Query: 181 PSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240
           PSSY EVE   NHEPF  RKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA
Sbjct: 181 PSSYGEVETTGNHEPFSTRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300
           LL+WW+THYKWPYPTEEEKSKLSV TGLDQKQINNWFINQRKRHWKPPEDMRF+LMDG G
Sbjct: 241 LLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG 300

Query: 301 AG----ECMKGSN 309
           AG    EC+KG N
Sbjct: 301 AGVGDGECIKGLN 313

[Close]

BLAST of CsGy2G004875 vs. ExPASy TrEMBL
Match: A0A0A0LGZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034560 PE=3 SV=1)

HSP 1 Score: 659 bits (1701), Expect = 1.86e-239
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60
           MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI
Sbjct: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60

Query: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120
           KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME
Sbjct: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEE 180
           SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEE 180

Query: 181 PSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240
           PSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA
Sbjct: 181 PSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300
           LLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG
Sbjct: 241 LLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300

Query: 301 AGECMKGSNFYDNGETGSHVI 321
           AGECMKGSNFYDNGETGSHVI
Sbjct: 301 AGECMKGSNFYDNGETGSHVI 321

[Close]

BLAST of CsGy2G004875 vs. ExPASy TrEMBL
Match: A0A5D3BBX6 (Homeobox protein knotted-1-like 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001080 PE=3 SV=1)

HSP 1 Score: 655 bits (1689), Expect = 1.26e-237
Identity = 318/321 (99.07%), Postives = 319/321 (99.38%), Query Frame = 0


Query: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60
           MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI
Sbjct: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60

Query: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120
           KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME
Sbjct: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEE 180
           SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMM DSRSAMNDEVSGTPEEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMLDSRSAMNDEVSGTPEEE 180

Query: 181 PSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240
           PSSYEEVEMPRNHEPFC RKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA
Sbjct: 181 PSSYEEVEMPRNHEPFCTRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300
           LLDWWNTHYKWPYPTEEEKSKLS+TTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG
Sbjct: 241 LLDWWNTHYKWPYPTEEEKSKLSITTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300

Query: 301 AGECMKGSNFYDNGETGSHVI 321
           AGECMKGSNFYDNGETGSHVI
Sbjct: 301 AGECMKGSNFYDNGETGSHVI 321

[Close]

BLAST of CsGy2G004875 vs. ExPASy TrEMBL
Match: A0A1S3BVM4 (homeobox protein knotted-1-like 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494133 PE=3 SV=1)

HSP 1 Score: 655 bits (1689), Expect = 1.26e-237
Identity = 318/321 (99.07%), Postives = 319/321 (99.38%), Query Frame = 0


Query: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60
           MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI
Sbjct: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60

Query: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120
           KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME
Sbjct: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEE 180
           SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMM DSRSAMNDEVSGTPEEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMLDSRSAMNDEVSGTPEEE 180

Query: 181 PSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240
           PSSYEEVEMPRNHEPFC RKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA
Sbjct: 181 PSSYEEVEMPRNHEPFCTRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300
           LLDWWNTHYKWPYPTEEEKSKLS+TTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG
Sbjct: 241 LLDWWNTHYKWPYPTEEEKSKLSITTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300

Query: 301 AGECMKGSNFYDNGETGSHVI 321
           AGECMKGSNFYDNGETGSHVI
Sbjct: 301 AGECMKGSNFYDNGETGSHVI 321

[Close]

BLAST of CsGy2G004875 vs. ExPASy TrEMBL
Match: A0A6J1G3R0 (homeobox protein knotted-1-like 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450478 PE=3 SV=1)

HSP 1 Score: 565 bits (1457), Expect = 2.99e-202
Identity = 277/319 (86.83%), Postives = 292/319 (91.54%), Query Frame = 0


Query: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60
           M+EFYRLNNPV++SYSNGV+G EAIASTSCG+IHEALMVDD++L LEAE TTGLNMSDMI
Sbjct: 1   MDEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMI 60

Query: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120
           KTQI+NHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRS IELGADPQLDNFME
Sbjct: 61  KTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSCIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEE 180
           SYCEVLHQYKNELSKPFDEA MFLTNIELELSNLCKGSFT  S+SRSA+NDEV+GT EEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAINDEVAGTSEEE 180

Query: 181 PSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240
           PSSY EVE   NHEPF  RKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA
Sbjct: 181 PSSYGEVETTGNHEPFSTRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300
           LL+WW+THYKWPYPTEEEKSKLSV TGLDQKQINNWFINQRKRHWKPPEDMRF+LMDG G
Sbjct: 241 LLEWWSTHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG 300

Query: 301 AG----------ECMKGSN 309
           AG          EC+KG N
Sbjct: 301 AGVGDGDGDGDGECIKGLN 319

[Close]

BLAST of CsGy2G004875 vs. ExPASy TrEMBL
Match: A0A6J1KHG4 (homeobox protein knotted-1-like 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493897 PE=3 SV=1)

HSP 1 Score: 564 bits (1453), Expect = 1.13e-201
Identity = 275/317 (86.75%), Postives = 291/317 (91.80%), Query Frame = 0


Query: 1   MEEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMI 60
           MEEFYRLNNPV++SYSNGV+G EAIASTSCG+IHEALMVDD++L LEAE TTGLNMSDMI
Sbjct: 1   MEEFYRLNNPVMSSYSNGVLGGEAIASTSCGDIHEALMVDDELLHLEAEPTTGLNMSDMI 60

Query: 61  KTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIELGADPQLDNFME 120
           KTQI+NHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRS IELGADPQLDNFME
Sbjct: 61  KTQIINHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSCIELGADPQLDNFME 120

Query: 121 SYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEE 180
           SYCEVLHQYKNELSKPFDEA MFLTNIELELSNLCKGSFT  S+SRSA++DEV+GTPEEE
Sbjct: 121 SYCEVLHQYKNELSKPFDEAAMFLTNIELELSNLCKGSFTATSESRSAIDDEVAGTPEEE 180

Query: 181 PSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240
           PSSY EVE   NHEPF  RKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA
Sbjct: 181 PSSYGEVETSGNHEPFSTRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMA 240

Query: 241 LLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMDGVG 300
           LL+WW+ HYKWPYPTEEEKSKLSV TGLDQKQINNWFINQRKRHWKPPEDMRF+LMDG G
Sbjct: 241 LLEWWSAHYKWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRHWKPPEDMRFMLMDGAG 300

Query: 301 AGE--------CMKGSN 309
            G+        C+KG N
Sbjct: 301 VGDGDGDGDGGCIKGLN 317

[Close]

BLAST of CsGy2G004875 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 261.9 bits (668), Expect = 6.6e-70
Identity = 134/289 (46.37%), Postives = 191/289 (66.09%), Query Frame = 0


Query: 13  TSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDMIKTQIVNHPLYPK 72
           T  +  + GS+ +A+    E+   +   +D   L            +IK++I +HPLYP+
Sbjct: 33  TGDNQRLFGSDELATALSSELLPRIRKAEDNFSL-----------SVIKSKIASHPLYPR 92

Query: 73  LVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIE----LGADPQLDNFMESYCEVLHQ 132
           L+  YI+CQKVGAP ++A +LEEI RENH  +  +      GADP+LD FME+YC++L +
Sbjct: 93  LLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDVAPLSCFGADPELDEFMETYCDILVK 152

Query: 133 YKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVSGTPEEEPSSYEEVE 192
           YK +L++PFDEAT F+  IE++L NLC G       S +A++D+ + + +EE    +++ 
Sbjct: 153 YKTDLARPFDEATTFINKIEMQLQNLCTG-----PASATALSDDGAVSSDEELREDDDIA 212

Query: 193 MPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLPKDARMALLDWWNTH 252
              + +    R  ++DLK+ LL+K+  ++SSLK EF KK+KK KLP++AR ALLDWWN H
Sbjct: 213 ADDSQQ----RSNDRDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVH 272

Query: 253 YKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFVLMD 298
            KWPYPTE +K  L+  TGLDQKQINNWFINQRKRHWKP E+M F +MD
Sbjct: 273 NKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSENMPFDMMD 301

[Close]

BLAST of CsGy2G004875 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 257.7 bits (657), Expect = 1.3e-68
Identity = 131/243 (53.91%), Postives = 169/243 (69.55%), Query Frame = 0


Query: 59  MIKTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIE----LGADPQ 118
           +IK +I  HP YP+L+ AYI+CQKVGAPP++A LLEEI RE+   +  +      GADP+
Sbjct: 84  VIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQEVVPSSCFGADPE 143

Query: 119 LDNFMESYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVS 178
           LD FME+YC++L +YK++L++PFDEAT FL  IE++L NLC G    +  +R    D V 
Sbjct: 144 LDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTG----VESARGVSEDGVI 203

Query: 179 GTPEEEPSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLP 238
            + EE      EV      E    R  ++DLK+ LL+K+   +S+LK EF KK+KK KLP
Sbjct: 204 SSDEELSGGDHEVA-----EDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLP 263

Query: 239 KDARMALLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFV 298
           ++AR ALLDWWN HYKWPYPTE +K  L+  TGLDQKQINNWFINQRKRHWKP E+M F 
Sbjct: 264 REARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPFA 317

[Close]

BLAST of CsGy2G004875 vs. TAIR 10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 252.7 bits (644), Expect = 4.0e-67
Identity = 131/245 (53.47%), Postives = 169/245 (68.98%), Query Frame = 0


Query: 59  MIKTQIVNHPLYPKLVSAYIECQK--VGAPPQVASLLEEIGRENHPSRSSIE----LGAD 118
           +IK +I  HP YP+L+ AYI+CQK  VGAPP++A LLEEI RE+   +  +      GAD
Sbjct: 84  VIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACLLEEIQRESDVYKQEVVPSSCFGAD 143

Query: 119 PQLDNFMESYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDE 178
           P+LD FME+YC++L +YK++L++PFDEAT FL  IE++L NLC G    +  +R    D 
Sbjct: 144 PELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTG----VESARGVSEDG 203

Query: 179 VSGTPEEEPSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEK 238
           V  + EE      EV      E    R  ++DLK+ LL+K+   +S+LK EF KK+KK K
Sbjct: 204 VISSDEELSGGDHEVA-----EDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGK 263

Query: 239 LPKDARMALLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMR 298
           LP++AR ALLDWWN HYKWPYPTE +K  L+  TGLDQKQINNWFINQRKRHWKP E+M 
Sbjct: 264 LPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMP 319

[Close]

BLAST of CsGy2G004875 vs. TAIR 10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor )

HSP 1 Score: 245.4 bits (625), Expect = 6.4e-65
Identity = 129/245 (52.65%), Postives = 171/245 (69.80%), Query Frame = 0


Query: 57  SDMIKTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGRENHPSRSSIE----LGAD 116
           S  +K +I+ HP Y +L++AY+ CQKVGAPP+V + LEE       + +S+     LG D
Sbjct: 118 SASVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGED 177

Query: 117 PQLDNFMESYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDE 176
           P LD FME+YCE+L +Y+ ELSKPF EA +FL  +E +  +L     ++ S S  +   E
Sbjct: 178 PGLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSL-----SLSSPSSFSGYGE 237

Query: 177 VSGTPEEEPSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEK 236
            +       SS EEV+M  N+E    +  +++LK  LL+KYSGYL SLK+EF+KKRKK K
Sbjct: 238 TAIDRNNNGSSEEEVDM--NNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGK 297

Query: 237 LPKDARMALLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMR 296
           LPK+AR  LLDWW+ HYKWPYP+E++K  L+ +TGLDQKQINNWFINQRKRHWKP EDM+
Sbjct: 298 LPKEARQQLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQ 355

Query: 297 FVLMD 298
           FV+MD
Sbjct: 358 FVVMD 355

[Close]

BLAST of CsGy2G004875 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 240.0 bits (611), Expect = 2.7e-63
Identity = 136/305 (44.59%), Postives = 193/305 (63.28%), Query Frame = 0


Query: 2   EEFYRLNNPVITSYSNGVVGSEAIASTSCGEIHEALMVDDDMLQLEAEVTTGLNMSDM-- 61
           E  +R ++    + +N  V SEA +S      H ++++       EA      N+SD+  
Sbjct: 77  ENCFRSDHDQPNNNNNPSVKSEASSSRI---NHYSMLMRAIHNTQEANNNNNDNVSDVEA 136

Query: 62  IKTQIVNHPLYPKLVSAYIECQKVGAPPQVASLLEEIGR--ENHPSRSSIELGA---DPQ 121
           +K +I+ HP Y  L+ AY++CQK+GAPP V   +    +  E    RS+  + A   DP+
Sbjct: 137 MKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSRDPE 196

Query: 122 LDNFMESYCEVLHQYKNELSKPFDEATMFLTNIELELSNLCKGSFTMMSDSRSAMNDEVS 181
           LD FME+YC++L +Y+ EL++P  EA  F+  IE +LS LC+    ++++     ++  S
Sbjct: 197 LDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSPIHILNNPDGKSDNMGS 256

Query: 182 GTPEEEPSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSSLKKEFLKKRKKEKLP 241
              E+E +S  E E+P   +P   R  +++LK  LLKKYSGYLSSLK+E  KK+KK KLP
Sbjct: 257 SDEEQENNSGGETELP-EIDP---RAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLP 316

Query: 242 KDARMALLDWWNTHYKWPYPTEEEKSKLSVTTGLDQKQINNWFINQRKRHWKPPEDMRFV 300
           K+AR  LL WW  HYKWPYP+E EK  L+ +TGLDQKQINNWFINQRKRHWKP EDM+F+
Sbjct: 317 KEARQKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFM 374

The following BLAST results are available for this feature:

BLAST of CsGy2G004875 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2Y007	9.0e-80	54.71	Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica OX=39946 GN=OSH...	[more]
Q7GDL5	9.0e-80	54.71	Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]
Q9FP29	6.5e-78	56.55	Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OS...	[more]
P46640	9.4e-69	46.37	Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 ...	[more]
Q84JS6	1.8e-67	53.91	Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 ...	[more]

BLAST of CsGy2G004875 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144749.1	3.85e-239	100.00	homeobox protein knotted-1-like 1 [Cucumis sativus] >KGN61003.1 hypothetical pro...	[more]
XP_008453416.1	2.60e-237	99.07	PREDICTED: homeobox protein knotted-1-like 1 isoform X1 [Cucumis melo] >KAA00480...	[more]
XP_038889741.1	1.25e-219	91.90	homeobox protein knotted-1-like 1 [Benincasa hispida]	[more]
KAG6599184.1	1.48e-203	88.50	Homeobox protein knotted-1-like 1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023545300.1	3.49e-202	88.18	homeobox protein knotted-1-like 1 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy2G004875 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGZ6	1.86e-239	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034560 PE=3 SV=1	[more]
A0A5D3BBX6	1.26e-237	99.07	Homeobox protein knotted-1-like 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3BVM4	1.26e-237	99.07	homeobox protein knotted-1-like 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1G3R0	2.99e-202	86.83	homeobox protein knotted-1-like 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1KHG4	1.13e-201	86.75	homeobox protein knotted-1-like 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of CsGy2G004875 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70510.1	6.6e-70	46.37	KNOTTED-like from Arabidopsis thaliana 2	[more]
AT1G23380.1	1.3e-68	53.91	KNOTTED1-like homeobox gene 6	[more]
AT1G23380.2	4.0e-67	53.47	KNOTTED1-like homeobox gene 6	[more]
AT1G62360.1	6.4e-65	52.65	KNOX/ELK homeobox transcription factor	[more]
AT4G08150.1	2.7e-63	44.59	KNOTTED-like from Arabidopsis thaliana	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 226..291 e-value: 1.5E-11 score: 54.3
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 224..287 score: 12.503195
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 236..287 e-value: 1.26929E-12 score: 59.9497
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 58..102 e-value: 1.1E-21 score: 88.1
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 60..101 e-value: 6.3E-21 score: 73.9
IPR005539	ELK domain	SMART	SM01188	ELK_2	coord: 204..225 e-value: 5.9E-6 score: 35.8
IPR005539	ELK domain	PFAM	PF03789	ELK	coord: 204..225 e-value: 3.1E-9 score: 36.7
IPR005539	ELK domain	PROSITE	PS51213	ELK	coord: 204..224 score: 10.946777
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 105..156 e-value: 1.8E-21 score: 87.4
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 109..155 e-value: 3.6E-21 score: 74.4
None	No IPR available	GENE3D	1.10.10.60		coord: 222..293 e-value: 1.9E-24 score: 87.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..189
None	No IPR available	PANTHER	PTHR11850:SF221	HOMEOBOX PROTEIN KNOTTED-1-LIKE 10	coord: 1..298
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 1..298
IPR008422	Homeobox KN domain	PFAM	PF05920	Homeobox_KN	coord: 244..283 e-value: 3.8E-17 score: 61.9
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 262..285
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 226..296

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G004875.1	CsGy2G004875.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding