CsGy2G004290 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G004290
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr2: 2982972 .. 2984316 (+)
RNA-Seq Expression	CsGy2G004290
Synteny	CsGy2G004290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGCTTCGTTTCTCTGAGCTTCTCCGTTCCACAGCTCACTCTCAAGGTAAATTATGCTTCCCAACGCCTTTCCTCTTATCGCATTTGTAATTGCTGCGGAACCTGCTAGAATATCTACGCGATTATTGCATAATGTTCAACGTAATCGCCATTTGAGATAGCTTGTTTAGGTTTGCTATATTTCACCTCCCTGAATTTTCTTCTACCTTTAAGAAGACGATTGCGTTCTTTTTTTTTTTTTTTTTTTTTTTGGTATATATGCTTTCCGGTGAAACGTTTGGGCTTAAGGAACTATTCTGAAACTTGTTATTTGGTTGGACAATTTTCTACGGATGCTTGGGAAATGTTCGTTGATTATTTTAGCCGAAATGGATTAAGACGCTGAATACTGAATAGTTCGTTATTCTGAAGAGAATATCGTCAGAAAATTAAGTTTATGAGATTATATAAGGATAATTGAGGATGTTATTCTAATTTTGTTGTAAGGATGGATTAGCGAGCAAATTTGTTATGGTTCATACGTAGTGCCATTCATAACTGTAAATTTCTATGCAGCATCATCAAAAAGGTTAGTTCAGATGCTAAAATCATTGCCTGAAGCTCAATCGTTAATCCTGGTTAAAGATATATGAGTTGTTTATTTCTCTAGATTTTAAGGTTTTGATTGCACACTGAATTGTTTTCGATGCGTCAGGAAATCCCACCACGAAAACTGGCTAAAGCTACGGTAGTTTCAAGGCGAGCTGGAACAGGTTTAATTCTCATTCTCTGTATGGTCAATTATTACTGGGATCACCCGCATTTCAACTTAAAATTTTTCTAGTTACATCTTGAGTATGAACGTCTATTAGTCCATGCGTCTACTTGTTACAAAAGACAAACATCCTTATTCCAAAGCATACACATTGAGACGAAAATAGTCTATATTTCTTTACAATATACAGGCTCCACTAATTACATTGATTGAAAATTAGAAAACTACTGCAAAATTGATAAAAACTAGAAAAGTTAATGATTGAATGAATGAAGCATTGTACCTATACCCATGTAATGTAATCCTGTACCCACCATATACTTTCTTGATTAGATTGAGTAAATTTTAGATTGCTGATGATATAAATTGCATTGCAGCTTCGAAGCTTGTGCTACCCTGGTATTCAAAGAAATCCATATCGATTAATTGGGAAAACTTTCAATCTGTACGGTTAACTTCAAGACCTTTTTGGGGCATAGTTTCTTCTAGTTCCAGGAATATGGTACTATTAACTGGCTACTGGGTAGGACCTGATGTTGATGACGGATGGGGATATATAGAAGCTTTTATCGATCGGATTACTTAA

mRNA sequence

ATGGCGAGCTTCGTTTCTCTGAGCTTCTCCGTTCCACAGCTCACTCTCAAGGAAATCCCACCACGAAAACTGGCTAAAGCTACGGTAGTTTCAAGGCGAGCTGGAACAGCTTCGAAGCTTGTGCTACCCTGGTATTCAAAGAAATCCATATCGATTAATTGGGAAAACTTTCAATCTGTACGGTTAACTTCAAGACCTTTTTGGGGCATAGTTTCTTCTAGTTCCAGGAATATGGTACTATTAACTGGCTACTGGGTAGGACCTGATGTTGATGACGGATGGGGATATATAGAAGCTTTTATCGATCGGATTACTTAA

Coding sequence (CDS)

ATGGCGAGCTTCGTTTCTCTGAGCTTCTCCGTTCCACAGCTCACTCTCAAGGAAATCCCACCACGAAAACTGGCTAAAGCTACGGTAGTTTCAAGGCGAGCTGGAACAGCTTCGAAGCTTGTGCTACCCTGGTATTCAAAGAAATCCATATCGATTAATTGGGAAAACTTTCAATCTGTACGGTTAACTTCAAGACCTTTTTGGGGCATAGTTTCTTCTAGTTCCAGGAATATGGTACTATTAACTGGCTACTGGGTAGGACCTGATGTTGATGACGGATGGGGATATATAGAAGCTTTTATCGATCGGATTACTTAA

Protein sequence

MASFVSLSFSVPQLTLKEIPPRKLAKATVVSRRAGTASKLVLPWYSKKSISINWENFQSVRLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT*

Homology

[Close]

BLAST of CsGy2G004290 vs. NCBI nr
Match: KGN60942.1 (hypothetical protein Csa_021351 [Cucumis sativus])

HSP 1 Score: 214 bits (545), Expect = 4.89e-70
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPRKLAKATVVSRRAGTASKLVLPWYSKKSISINWENFQSV 60
           MASFVSLSFSVPQLTLKEIPPRKLAKAT+VSRRAGTASKLVLPWYSKKSISINWENFQSV
Sbjct: 1   MASFVSLSFSVPQLTLKEIPPRKLAKATLVSRRAGTASKLVLPWYSKKSISINWENFQSV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105
           RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105

[Close]

BLAST of CsGy2G004290 vs. NCBI nr
Match: KAA0048017.1 (hypothetical protein E6C27_scaffold385G00850 [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (520), Expect = 3.19e-66
Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPRKLAKATVVSRRAGTASKLVLPWYSKKSISINWENFQSV 60
           MASFVSLSFSVPQLTLKEIPP KLAKATVVSRRAGTASKLVLP YSKKSIS+NWENF+SV
Sbjct: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105
           RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105

[Close]

BLAST of CsGy2G004290 vs. NCBI nr
Match: TYK13803.1 (hypothetical protein E5676_scaffold488G00650 [Cucumis melo var. makuwa])

HSP 1 Score: 202 bits (514), Expect = 2.62e-65
Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPRKLAKATVVSRRAGTASKLVLPWYSKKSISINWENFQSV 60
           MASFVSLSFSVPQLTLKEIPP KLAKATVVSRRAGTA KLVLP YSKKSIS+NWENF+SV
Sbjct: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTALKLVLPCYSKKSISMNWENFRSV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105
           RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105

[Close]

BLAST of CsGy2G004290 vs. NCBI nr
Match: XP_038890542.1 (uncharacterized protein LOC120080060 [Benincasa hispida])

HSP 1 Score: 172 bits (436), Expect = 2.07e-53
Identity = 86/105 (81.90%), Postives = 92/105 (87.62%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPRKLAKATVVSRRAGTASKLVLPWYSKKSISINWENFQSV 60
           MA+FVSLSFSVPQ TLKEIPPRKL++ TVVS RAGTASKLVL   S  SIS+NW+N   V
Sbjct: 1   MATFVSLSFSVPQPTLKEIPPRKLSEVTVVSSRAGTASKLVLSCCSNISISMNWKNCHPV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105
           RLT RPFWGIVSSSSR MVLL+GYWVGPDVDDGWGYIEAFIDRIT
Sbjct: 61  RLTPRPFWGIVSSSSRAMVLLSGYWVGPDVDDGWGYIEAFIDRIT 105

[Close]

BLAST of CsGy2G004290 vs. NCBI nr
Match: XP_022999037.1 (uncharacterized protein LOC111493548 [Cucurbita maxima])

HSP 1 Score: 168 bits (426), Expect = 6.72e-52
Identity = 85/105 (80.95%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPRKLAKATVVSRRAGTASKLVLPWYSKKSISINWENFQSV 60
           MASFVSLSFSVPQ+  KE+PP KLAK TVV RRAGTASK VL   S KSIS+NWEN Q V
Sbjct: 1   MASFVSLSFSVPQVIFKEMPPWKLAKVTVVPRRAGTASKPVLSCCSNKSISMNWENCQPV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105
           RLTSRPFWGIVSSSSRN+VL  GYWVGPDVDDGWGYIEA +DRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNLVL-AGYWVGPDVDDGWGYIEALVDRIT 104

[Close]

BLAST of CsGy2G004290 vs. ExPASy TrEMBL
Match: A0A0A0LJQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G030030 PE=4 SV=1)

HSP 1 Score: 214 bits (545), Expect = 2.37e-70
Identity = 104/105 (99.05%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPRKLAKATVVSRRAGTASKLVLPWYSKKSISINWENFQSV 60
           MASFVSLSFSVPQLTLKEIPPRKLAKAT+VSRRAGTASKLVLPWYSKKSISINWENFQSV
Sbjct: 1   MASFVSLSFSVPQLTLKEIPPRKLAKATLVSRRAGTASKLVLPWYSKKSISINWENFQSV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105
           RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105

[Close]

BLAST of CsGy2G004290 vs. ExPASy TrEMBL
Match: A0A5A7U1B8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00850 PE=4 SV=1)

HSP 1 Score: 204 bits (520), Expect = 1.54e-66
Identity = 101/105 (96.19%), Postives = 103/105 (98.10%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPRKLAKATVVSRRAGTASKLVLPWYSKKSISINWENFQSV 60
           MASFVSLSFSVPQLTLKEIPP KLAKATVVSRRAGTASKLVLP YSKKSIS+NWENF+SV
Sbjct: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTASKLVLPCYSKKSISMNWENFRSV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105
           RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105

[Close]

BLAST of CsGy2G004290 vs. ExPASy TrEMBL
Match: A0A5D3CPK7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00650 PE=4 SV=1)

HSP 1 Score: 202 bits (514), Expect = 1.27e-65
Identity = 100/105 (95.24%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPRKLAKATVVSRRAGTASKLVLPWYSKKSISINWENFQSV 60
           MASFVSLSFSVPQLTLKEIPP KLAKATVVSRRAGTA KLVLP YSKKSIS+NWENF+SV
Sbjct: 1   MASFVSLSFSVPQLTLKEIPPWKLAKATVVSRRAGTALKLVLPCYSKKSISMNWENFRSV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105
           RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105

[Close]

BLAST of CsGy2G004290 vs. ExPASy TrEMBL
Match: A0A6J1K9Q0 (uncharacterized protein LOC111493548 OS=Cucurbita maxima OX=3661 GN=LOC111493548 PE=4 SV=1)

HSP 1 Score: 168 bits (426), Expect = 3.25e-52
Identity = 85/105 (80.95%), Postives = 90/105 (85.71%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPRKLAKATVVSRRAGTASKLVLPWYSKKSISINWENFQSV 60
           MASFVSLSFSVPQ+  KE+PP KLAK TVV RRAGTASK VL   S KSIS+NWEN Q V
Sbjct: 1   MASFVSLSFSVPQVIFKEMPPWKLAKVTVVPRRAGTASKPVLSCCSNKSISMNWENCQPV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105
           RLTSRPFWGIVSSSSRN+VL  GYWVGPDVDDGWGYIEA +DRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNLVL-AGYWVGPDVDDGWGYIEALVDRIT 104

[Close]

BLAST of CsGy2G004290 vs. ExPASy TrEMBL
Match: A0A6J1G3X3 (uncharacterized protein LOC111450562 OS=Cucurbita moschata OX=3662 GN=LOC111450562 PE=4 SV=1)

HSP 1 Score: 164 bits (414), Expect = 2.13e-50
Identity = 84/105 (80.00%), Postives = 89/105 (84.76%), Query Frame = 0


Query: 1   MASFVSLSFSVPQLTLKEIPPRKLAKATVVSRRAGTASKLVLPWYSKKSISINWENFQSV 60
           MASFVSLSFSVPQ+  KE+PP KLAK TVV RRAGTASK VL   + KSIS NWEN   V
Sbjct: 1   MASFVSLSFSVPQVIFKEMPPWKLAKVTVVPRRAGTASKFVLSCCTNKSIS-NWENCHPV 60

Query: 61  RLTSRPFWGIVSSSSRNMVLLTGYWVGPDVDDGWGYIEAFIDRIT 105
           RLTSRPFWGIVSSSSRN+VL  GYWVGPDVDDGWGYIEAF+DRIT
Sbjct: 61  RLTSRPFWGIVSSSSRNLVL-AGYWVGPDVDDGWGYIEAFVDRIT 103

The following BLAST results are available for this feature:

BLAST of CsGy2G004290 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G004290 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60942.1	4.89e-70	99.05	hypothetical protein Csa_021351 [Cucumis sativus]	[more]
KAA0048017.1	3.19e-66	96.19	hypothetical protein E6C27_scaffold385G00850 [Cucumis melo var. makuwa]	[more]
TYK13803.1	2.62e-65	95.24	hypothetical protein E5676_scaffold488G00650 [Cucumis melo var. makuwa]	[more]
XP_038890542.1	2.07e-53	81.90	uncharacterized protein LOC120080060 [Benincasa hispida]	[more]
XP_022999037.1	6.72e-52	80.95	uncharacterized protein LOC111493548 [Cucurbita maxima]	[more]

BLAST of CsGy2G004290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJQ7	2.37e-70	99.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G030030 PE=4 SV=1	[more]
A0A5A7U1B8	1.54e-66	96.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CPK7	1.27e-65	95.24	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1K9Q0	3.25e-52	80.95	uncharacterized protein LOC111493548 OS=Cucurbita maxima OX=3661 GN=LOC111493548...	[more]
A0A6J1G3X3	2.13e-50	80.00	uncharacterized protein LOC111450562 OS=Cucurbita moschata OX=3662 GN=LOC1114505...	[more]

BLAST of CsGy2G004290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G004290.2	CsGy2G004290.2	mRNA