CsGy2G002153 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G002153
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr2: 1444619 .. 1444774 (+)
RNA-Seq Expression	CsGy2G002153
Synteny	CsGy2G002153

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATGAAGAAGAAGAAGAAGAAGGAAGAAGGGAAGAAGATGAAGATGATGATGGTGTAAGCCCTAGATTTCATAGTCATAAGCTTCATGGATTTGAGATATCAACGGCTAGGATTGGAGAATGGGGAGTGACAAACCATTGTGGGCAATGA

mRNA sequence

ATGGAGGATGAAGAAGAAGAAGAAGAAGGAAGAAGGGAAGAAGATGAAGATGATGATGGTGTAAGCCCTAGATTTCATAGTCATAAGCTTCATGGATTTGAGATATCAACGGCTAGGATTGGAGAATGGGGAGTGACAAACCATTGTGGGCAATGA

Coding sequence (CDS)

ATGGAGGATGAAGAAGAAGAAGAAGAAGGAAGAAGGGAAGAAGATGAAGATGATGATGGTGTAAGCCCTAGATTTCATAGTCATAAGCTTCATGGATTTGAGATATCAACGGCTAGGATTGGAGAATGGGGAGTGACAAACCATTGTGGGCAATGA

Protein sequence

MEDEEEEEEGRREEDEDDDGVSPRFHSHKLHGFEISTARIGEWGVTNHCGQ*

Homology

[Close]

BLAST of CsGy2G002153 vs. NCBI nr
Match: KGN60717.1 (hypothetical protein Csa_019340 [Cucumis sativus])

HSP 1 Score: 105 bits (262), Expect = 1.67e-28
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  MEDEEEEEEGRREEDEDDDGVSPRFHSHKLHGFEISTARIGEWGVTNHCGQ 51
          MEDEEEEEEGRREEDEDDDGVSPRFHSHKLHGFEISTARIGEWGVTNHCGQ
Sbjct: 1  MEDEEEEEEGRREEDEDDDGVSPRFHSHKLHGFEISTARIGEWGVTNHCGQ 51

[Close]

BLAST of CsGy2G002153 vs. ExPASy TrEMBL
Match: A0A0A0LJ11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008090 PE=4 SV=1)

HSP 1 Score: 105 bits (262), Expect = 8.08e-29
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 1  MEDEEEEEEGRREEDEDDDGVSPRFHSHKLHGFEISTARIGEWGVTNHCGQ 51
          MEDEEEEEEGRREEDEDDDGVSPRFHSHKLHGFEISTARIGEWGVTNHCGQ
Sbjct: 1  MEDEEEEEEGRREEDEDDDGVSPRFHSHKLHGFEISTARIGEWGVTNHCGQ 51

The following BLAST results are available for this feature:

BLAST of CsGy2G002153 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G002153 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60717.1	1.67e-28	100.00	hypothetical protein Csa_019340 [Cucumis sativus]	[more]

BLAST of CsGy2G002153 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ11	8.08e-29	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008090 PE=4 SV=1	[more]

BLAST of CsGy2G002153 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G002153.1	CsGy2G002153.1	mRNA