CsGy2G001410 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy2G001410
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr2: 945109 .. 945363 (-)
RNA-Seq ExpressionCsGy2G001410
SyntenyCsGy2G001410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAAATTAAAGAGATCGTCGTTCTTACAGAGCGAAGAGACACAGCCTTTATCTTGATTGGCGTCTTTGGACATCGTACGTAATGTAAGAGAAATGCTGTTCTTGCGGTGGAAGAACGTGGTACATCCCTTCTTTCTTTCAGTTCCGAAATTGGGAATCTCTGTTTAGGTTTGGCGATGGAAAGTTTAGAGTGTGGAAAAGGATTGAATGGAAGTCGTTGGGCAATTACTATGAGCGAAGAAGAAACCTAA

mRNA sequence

ATGGAAGAAATTAAAGAGATCGTCGTTCTTACAGAGCGAAGAGACACAGCCTTTATCTTGATTGGCGTCTTTGGACATCGTACTTCCGAAATTGGGAATCTCTGTTTAGGTTTGGCGATGGAAAGTTTAGAGTGTGGAAAAGGATTGAATGGAAGTCGTTGGGCAATTACTATGAGCGAAGAAGAAACCTAA

Coding sequence (CDS)

ATGGAAGAAATTAAAGAGATCGTCGTTCTTACAGAGCGAAGAGACACAGCCTTTATCTTGATTGGCGTCTTTGGACATCGTACTTCCGAAATTGGGAATCTCTGTTTAGGTTTGGCGATGGAAAGTTTAGAGTGTGGAAAAGGATTGAATGGAAGTCGTTGGGCAATTACTATGAGCGAAGAAGAAACCTAA

Protein sequence

MEEIKEIVVLTERRDTAFILIGVFGHRTSEIGNLCLGLAMESLECGKGLNGSRWAITMSEEET*
Homology
[Close]
BLAST of CsGy2G001410 vs. NCBI nr
Match: KGN60642.1 (hypothetical protein Csa_019401 [Cucumis sativus])

HSP 1 Score: 99.0 bits (245), Expect = 1.15e-25
Identity = 53/63 (84.13%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 1  MEEIKEIVVLTERRDTAFILIGVFGHRTSEIGNLCLGLAMESLECGKGLNGSRWAITMSE 60
          MEEIKEIVVLTERRDTAFILIGVFGHR          LAMESLECGKGLNGSRWAITMSE
Sbjct: 1  MEEIKEIVVLTERRDTAFILIGVFGHR----------LAMESLECGKGLNGSRWAITMSE 53

Query: 61 EET 63
          EET
Sbjct: 61 EET 53

[Close]
BLAST of CsGy2G001410 vs. ExPASy TrEMBL
Match: A0A0A0LIV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005880 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.56e-26
Identity = 53/63 (84.13%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 1  MEEIKEIVVLTERRDTAFILIGVFGHRTSEIGNLCLGLAMESLECGKGLNGSRWAITMSE 60
          MEEIKEIVVLTERRDTAFILIGVFGHR          LAMESLECGKGLNGSRWAITMSE
Sbjct: 1  MEEIKEIVVLTERRDTAFILIGVFGHR----------LAMESLECGKGLNGSRWAITMSE 53

Query: 61 EET 63
          EET
Sbjct: 61 EET 53

The following BLAST results are available for this feature:
BLAST of CsGy2G001410 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy2G001410 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60642.11.15e-2584.13hypothetical protein Csa_019401 [Cucumis sativus][more]
BLAST of CsGy2G001410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIV55.56e-2684.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G005880 PE=4 SV=1[more]
BLAST of CsGy2G001410 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G001410.2CsGy2G001410.2mRNA