CsGy2G000230 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G000230
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr2: 147618 .. 149943 (+)
RNA-Seq Expression	CsGy2G000230
Synteny	CsGy2G000230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACTCTGGTTGTTTGCGAGTTGCGAGCCTTCAAGGTCGTCATTTATTTTTCTTGCAAGCTTCAGGTTGGCTTTCTGGATTTTTTTTTTTTATTATAGAATTTAGGTTTATTGTTAAGGCTTTTAGGTAGAAAACCCTTTGTTTGTTTCTATCGTATCCTCAATGCTTATGCCACCGAAAATAACCCAATCCCCCAATCCCAAACTCATATGGATTTCCTCTTCTTTTTTTTTTCCCAAATATCCTCCTCTCCGATCATTATCAATTCCAATCACTCCCCAACTTTCTAAATCCTAAATAAGAAATCAGGTTACTCTTTAAAATCTATTTTATTTCTACATTTTGTTGGATGTCAAAATCTAAACATAAAAAATGTATTTAATAGGATAATAATGGGGTCTATTGCATTCATATCTCCATTATGTTTAAGTAGGAATCAATAATCTTAGAAAATTCCTTTCTATTGTTAAAGAATTTGACATGATGTAGTGCATTCATTTCAATTGTCAAAATTCCTCAAAGAAAAAAAAAAATCAATTTAGTTGTCATTTTGAAGGAAGTTTATTAATCTACACCTCTCCTCATAGTATTGCCAAATTTCTTCCAAATATAATTAATGACGAGAAGTGAGAGAGCGTCAAAATTGAAGTTTTAGTACATTCCAATAATAAGGAAACGAACTAAGAGAGAAAATAAAATCGTAATTTTTTTTGTGTAAATGGTAAATGTTTGAAAGTAAGAAAAAAGTAAAGTAGTTTCCCTTGGTTTAGTGAAGAAGACAATTAAAGAAAGCCAAACAACTTTTCTATTTTTTTCCTTTTGCAAAAACAGATATTACAAACAAATGCAATAAATTTTAGAGAAATTTTGAATTTGAATCATATTCCACGTGGCGAATATACAAGTGTTTGGGAAAGTCAAGATTTGGATCTCAAATATATATAATATAAAAACATAGAACCAATCCCCTCCTAATTTCATGAATGCAGCAGAAATGGAAATAATAAATAGGAAATAACAGATGGGGATATTTCATTATTAAATTTTCAATATTATTTTAGGGGTCCGTCTACAAGCGTGACTGTCAAATCTATATATTCTCTCTCTCTCTCTCACTGTTTTTATTATTATTATTATTATTTTGTTAATTAGTTTATTTATTTGTCCATCTCTTTCTCCTACTCTCTATCTAGATTTCTCAGAAGAGGTGTCTGCTCCTGAGATTCGATTTAATCGGCGATCTTTTTCCACTGCTCCTCGTGAATCAGACTCCTCTTCCTCCTTCTCTCCCTACAATATAATGTTCCAGATTTTCAAGGTACATCTTTTCTTTTATTTTCAGACCTTTCGAATTTTGTAATTATTACATAATAATCAAACTCAACAACACCACTCTTTTCTTCCCCTTCCCTTATAAATTATATGTATATATATATATAAAAAAAAACTGTGAGTGTCTGTGTTTTTGTTTGTAGTTTTTCTTAGTTGTACATATACGTTAAGATCTTCTATTTTAGATAGTTTTGGAAAAGAAAATAATTAATTAACTTTGGTGTCCCCAGGTAGCGCCTGCAGTCATTAAATTATCTTCCCCTTTTAGTCCTTTATTGTTGTGAAAAGAATTTGAGATTGTTCTTTGATTATTTCTTCTGCTTTGTCTCAATTTGAAGTAATACAGTACCCATTCATATTTTGTTTAAATTAAATGGGGGATTCTCTCTGTTTTTGTTTCTTTTTTAAATAAACATACTAGTTTGTTTATATGTTTATGAATTTCATTCAAATATATTTAATTAGAAATATAGAATATTGGATGAATAATGGTGTGGGTGTCTGTAGCCTTAGCTTCTCTGCATCATTGACTGGGTTTTTTAGTACTGCTTGGAGAGATTCTGAGCTCTAGGTGGGTATTCTCTCAGTACATTAAAAAAAAAGGTTCCTTTTTATGGAAATGAGATTGGGATCTGCTTTTTCTTTCTACATCTCATTATCAAGTAATAATAAAATCTTTTTTTTTTATTTGTTTACATAAATAATAATTTATCTCCTCTCATCATCCATGGAAATGGAGGTGATGATTTCTGCTACAGTTCTTGTCTCATGTGCAGAAATCCGTTTTTTTTTTTTTTTCCCTCCTCAGTTTGGGGGTCATGTTAGTGAAAGGTTGTACAGATAAAGAAGATATGATTATGGTCGTTCATTATTATTATTTTTTAAAAAGGAAACATGCATATGTTGAATTAAGTTATGCAAATTGTAACTAAAAAACTCATCTTTTTATTTTTATTCATTTAAAAAAGGATTGTTATTGGGGAAGTGATTGA

mRNA sequence

ATGCACTCTGGTTGTTTGCGAGTTGCGAGCCTTCAAGGTCGTCATTTATTTTTCTTGCAAGCTTCAGATTTCTCAGAAGAGGTGTCTGCTCCTGAGATTCGATTTAATCGGCGATCTTTTTCCACTGCTCCTCGTGAATCAGACTCCTCTTCCTCCTTCTCTCCCTACAATATAATGTTCCAGATTTTCAAGGATTGTTATTGGGGAAGTGATTGA

Coding sequence (CDS)

ATGCACTCTGGTTGTTTGCGAGTTGCGAGCCTTCAAGGTCGTCATTTATTTTTCTTGCAAGCTTCAGATTTCTCAGAAGAGGTGTCTGCTCCTGAGATTCGATTTAATCGGCGATCTTTTTCCACTGCTCCTCGTGAATCAGACTCCTCTTCCTCCTTCTCTCCCTACAATATAATGTTCCAGATTTTCAAGGATTGTTATTGGGGAAGTGATTGA

Protein sequence

MHSGCLRVASLQGRHLFFLQASDFSEEVSAPEIRFNRRSFSTAPRESDSSSSFSPYNIMFQIFKDCYWGSD*

Homology

[Close]

BLAST of CsGy2G000230 vs. NCBI nr
Match: KGN60511.1 (hypothetical protein Csa_019415 [Cucumis sativus])

HSP 1 Score: 149 bits (376), Expect = 2.60e-45
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MHSGCLRVASLQGRHLFFLQASDFSEEVSAPEIRFNRRSFSTAPRESDSSSSFSPYNIMF 60
          MHSGCLRVASLQGRHLFFLQASDFSEEVSAPEIRFNRRSFSTAPRESDSSSSFSPYNIMF
Sbjct: 1  MHSGCLRVASLQGRHLFFLQASDFSEEVSAPEIRFNRRSFSTAPRESDSSSSFSPYNIMF 60

Query: 61 QIFKDCYWGSD 71
          QIFKDCYWGSD
Sbjct: 61 QIFKDCYWGSD 71

[Close]

BLAST of CsGy2G000230 vs. ExPASy TrEMBL
Match: A0A0A0LKL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000200 PE=4 SV=1)

HSP 1 Score: 149 bits (376), Expect = 1.26e-45
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0


Query: 1  MHSGCLRVASLQGRHLFFLQASDFSEEVSAPEIRFNRRSFSTAPRESDSSSSFSPYNIMF 60
          MHSGCLRVASLQGRHLFFLQASDFSEEVSAPEIRFNRRSFSTAPRESDSSSSFSPYNIMF
Sbjct: 1  MHSGCLRVASLQGRHLFFLQASDFSEEVSAPEIRFNRRSFSTAPRESDSSSSFSPYNIMF 60

Query: 61 QIFKDCYWGSD 71
          QIFKDCYWGSD
Sbjct: 61 QIFKDCYWGSD 71

The following BLAST results are available for this feature:

BLAST of CsGy2G000230 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy2G000230 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN60511.1	2.60e-45	100.00	hypothetical protein Csa_019415 [Cucumis sativus]	[more]

BLAST of CsGy2G000230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKL4	1.26e-45	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000200 PE=4 SV=1	[more]

BLAST of CsGy2G000230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G000230.2	CsGy2G000230.2	mRNA