CsGy1G030910 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCAAAGAATGAGCATTTAAGTCTTTTCCTATCCACCCATTCTCCACCACAATCCACATTTCTTAAATGACTAAAACACCCCTCACATTTGCCGCATCTCTCCCAAATCTCAAGTATAACATCGTAAATCCATCAACCTCCTCCTTCGACGTCTTGTCCTGCAGCAGCTTCGCTTCACTTTCTCCTCCGCCATTTCTGAACCTTTTCCCAATCACTCTCTCTCTTTCTCTTTCTCTCTCTCTTTTCCATGGCTTTACATTTCTCTCTCTCTCCTCCGTCGGTCAGATCGTCGCCGTCGTTTCCCTGCAGTGGAAGGCAGCCGATCGCCACACTTTCCGAATCGAAGAGTGGCTGCTTCAGTTCGAGGAGCTTGAGTCTCTCTAGTAGCAGAAGCATTGGTGTTTCCGGTAGGAATGGGTCCTTCAAGGTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCCAAGTCACTGAGGTCAACAAGGATACTTTCTGGCCCATTGTCAATGCCGCTGGTGATAAAACCGTTGTGCTCGACATGTACACCCAATGGTTTGTGTTTCTATGTCTCCATATGTCTTTGTTTCTTATTTGTGTTGTTTCTAACGTTATTGCATAGAATATGGTTTCGGATATGAATGTTCTTATAATTGTAGATTATTTCTGATTTACTGATTTAATTACGCGATGCTTATAGTAGAGTATGGATCTCGTGGTTTAATAAATTGGAAAGAAACATTGGTTTCATTTAGGCTTCTGTCTGTCAAATGATCAAATTTATTAAAGTAATTCCCCCTACAAGTTGATGCCACTTTTTTTTTTCTTTTACTATTGAGTTTGACTTTGATTAAAAAATTATCATAGGAAGTCAGTTTGTTTTCTTCTTCTCCTTTACACAATAATGAGAACTTGAAAACTGGGTTTATATATATATTTTTCAACTTAATATACGAAAATTTTGGACTTCGGGCGCATAAAGCGCAATAGTTTTTGAACAAGAAGTGTGGGTTTTTTTGTCCTGTGAGGCACATTATATATATAAACATACTACATTAAGAAGGGAAAGAACAGTTGAAGTGGAAATGTGAAAAAGCAGACTTCTAATCCCAAGAAAGTTCTCATTTAGACTTTGGTAAATTCTCTATTTTTTAAATAATAAAAAAAGCCCCCAAGGGAGTGTCTTATTTTGTGAGCCTTGCCTTTTCAAGTAAGCCTTAAGCCTAGGCTCTCCCGGGAGGACATTTGGAGCAATATCAAGAGAAACTGTTTGAGGAGGCACATCTCACATTGAATGATTTTTTTCTAACGTTGCAGTTTTGGGAACAATATACAGTTGTAACATCTGCTAAATAAGTTCGAGACTTTCCAATAATGGGTATTCTAGCTACTGGTTTAGTCAAATTATTTTTTATTGCAAAGTATTTGTCATCAAGTCTATTTTAAACTTTGAAGAAATTATTTGGTTTCACCGCAAGGTGGTTGGCAGTTTTTTTTCCGTTAAATATAGAGTTCATTGGATTATAATTTTTTCAAGAAGTGGGGATGGGGATTCAAACTTGTGGCCTCTTGATGAATGAGATGGATATGCTTTAAGTACAAGCTACGTGATTGCTTGTGTCGTTTCCAATAACTTTGACATAGTTTTAATGTAATGTTTTCTGTCTTAAGCTATTTTGCTTCATCGGGCTGTGCCATTTGGTAACGGTGCCTTCCTAATGGTGATATGGTTTTATCCTGGCGTGGGAGTTTTTAGGAAAGAAAATTTGTAAGAATGAGAAACTGGTTATCTAGAAACACAACAGGATAGCTTGTTTATTTTAGATATAACTTATCTTACCCAAAAAAAAAATACTAGATTTAACATATCAAGTAAAAGAAAAAGTTATCGATTTAACAAACCTCATACAACAACTCAGAATAAACTTATTCGAATAATGTTATGTAACATAACGCAACTAAAATGTGCTTTGCCTCTATGTTATGACCTTTTGATTTTTCTTTTCTTTCCTTTAGCTTTTAAAAAATATTAATTGAGCTCTAGTAAGTTTAATTGGTACAAAAAGAACCTTTGCCTTTGACAGTCTTATTTTCTGGTAGAACTTTTATTTTTGCCTTATTGTTTCTTGTAATAACCCAATCCTCATGACTGTGGTGATTAATTTTAGTTCGAAAAAAACTTTCCTTGTGTTTGCTATATGCAATTTCAGACTGCTTGCGAGACTATGCATTTGTGAAAGTTCTAAGATTCATTATTTATTGTCTCTGTTTTTGGACTCACAAGCTTAACACCTTAATTAACTTTCTTTATTCATCCCTACATGGTACATTAAAGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGATTTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGATTGCAACATAGACAATAAGGTTCATATGGTCCCTAATTTCTTGCTGGAACTTAGGAATGTATTTTCATAATAGTTCATATAAGAAGTAAGAACATTGAATTATCTTTATTTGGCAGCCATTAGCAAAGGAACTTGGGATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAAAAGGTCGTTAAAGAAGTAACTGGAGCAAAGTTTGATGAGTTGGTTCATGCCATTGATGCTGTAAGATCCAGCTGAAAACTCTCCTCTCTTCTCTTCTCTTCTCTTCTCTTCTTTGTAAATTCAAATAATATGATGCAAGGAAGAGTATTCAGGACAGTTATTTATTTTACTCTATTAGTTTAATGATTTTGTGTACTGTCAAGTGTTAAGGAAAAAGCAGTTCAACCATGGGAAATGATTCTGTATATAGATGTGTGTACAATGACAGTTCCTACATATTCCAAAATTTACTTTGCTAAATACATTTTTTTATGAGTGGGTTTGAATGTTTTTATAATGGCTTTGGGTATGTTTCTGATTTCTGGTTTTTGGTTAGATTTTGGGTGACTTTTATTAGGTTTTAGTTGGTTTGTAGTGTCTGTTTGGGATGGCGTGTAAGAAGTGCTTTAAAATAAAGGATACTTG ACCAAAGAATGAGCATTTAAGTCTTTTCCTATCCACCCATTCTCCACCACAATCCACATTTCTTAAATGACTAAAACACCCCTCACATTTGCCGCATCTCTCCCAAATCTCAAGTATAACATCGTAAATCCATCAACCTCCTCCTTCGACGTCTTGTCCTGCAGCAGCTTCGCTTCACTTTCTCCTCCGCCATTTCTGAACCTTTTCCCAATCACTCTCTCTCTTTCTCTTTCTCTCTCTCTTTTCCATGGCTTTACATTTCTCTCTCTCTCCTCCGTCGGTCAGATCGTCGCCGTCGTTTCCCTGCAGTGGAAGGCAGCCGATCGCCACACTTTCCGAATCGAAGAGTGGCTGCTTCAGTTCGAGGAGCTTGAGTCTCTCTAGTAGCAGAAGCATTGGTGTTTCCGGTAGGAATGGGTCCTTCAAGGTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCCAAGTCACTGAGGTCAACAAGGATACTTTCTGGCCCATTGTCAATGCCGCTGGTGATAAAACCGTTGTGCTCGACATGTACACCCAATGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGATTTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGATTGCAACATAGACAATAAGCCATTAGCAAAGGAACTTGGGATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAAAAGGTCGTTAAAGAAGTAACTGGAGCAAAGTTTGATGAGTTGGTTCATGCCATTGATGCTGTAAGATCCAGCTGAAAACTCTCCTCTCTTCTCTTCTCTTCTCTTCTCTTCTTTGTAAATTCAAATAATATGATGCAAGGAAGAGTATTCAGGACAGTTATTTATTTTACTCTATTAGTTTAATGATTTTGTGTACTGTCAAGTGTTAAGGAAAAAGCAGTTCAACCATGGGAAATGATTCTGTATATAGATGTGTGTACAATGACAGTTCCTACATATTCCAAAATTTACTTTGCTAAATACATTTTTTTATGAGTGGGTTTGAATGTTTTTATAATGGCTTTGGGTATGTTTCTGATTTCTGGTTTTTGGTTAGATTTTGGGTGACTTTTATTAGGTTTTAGTTGGTTTGTAGTGTCTGTTTGGGATGGCGTGTAAGAAGTGCTTTAAAATAAAGGATACTTG ATGGCTTTACATTTCTCTCTCTCTCCTCCGTCGGTCAGATCGTCGCCGTCGTTTCCCTGCAGTGGAAGGCAGCCGATCGCCACACTTTCCGAATCGAAGAGTGGCTGCTTCAGTTCGAGGAGCTTGAGTCTCTCTAGTAGCAGAAGCATTGGTGTTTCCGGTAGGAATGGGTCCTTCAAGGTCAATTCAAGCTTGGAGACTGCCGGCGCTACTGTTGGCCAAGTCACTGAGGTCAACAAGGATACTTTCTGGCCCATTGTCAATGCCGCTGGTGATAAAACCGTTGTGCTCGACATGTACACCCAATGGTGTGGACCCTGCAAAGTGATGGCCCCCAAATTTCAAGATTTGTCTGAGAAATATCTTGACGTTGTCTTTCTAAAGCTTGATTGCAACATAGACAATAAGCCATTAGCAAAGGAACTTGGGATAAAAGTGGTGCCAACTTTCAAAATTCTAAAGGATAAAAAGGTCGTTAAAGAAGTAACTGGAGCAAAGTTTGATGAGTTGGTTCATGCCATTGATGCTGTAAGATCCAGCTGA MALHFSLSPPSVRSSPSFPCSGRQPIATLSESKSGCFSSRSLSLSSSRSIGVSGRNGSFKVNSSLETAGATVGQVTEVNKDTFWPIVNAAGDKTVVLDMYTQWCGPCKVMAPKFQDLSEKYLDVVFLKLDCNIDNKPLAKELGIKVVPTFKILKDKKVVKEVTGAKFDELVHAIDAVRSS* Homology
BLAST of CsGy1G030910 vs. ExPASy Swiss-Prot
Match: P29450 (Thioredoxin F-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 2.6e-52 Identity = 118/186 (63.44%), Postives = 140/186 (75.27%), Query Frame = 0
BLAST of CsGy1G030910 vs. ExPASy Swiss-Prot
Match: Q9XFH9 (Thioredoxin F2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g16400 PE=1 SV=1) HSP 1 Score: 200.3 bits (508), Expect = 1.9e-50 Identity = 111/182 (60.99%), Postives = 132/182 (72.53%), Query Frame = 0
BLAST of CsGy1G030910 vs. ExPASy Swiss-Prot
Match: Q9XFH8 (Thioredoxin F1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g02730 PE=1 SV=2) HSP 1 Score: 190.7 bits (483), Expect = 1.5e-47 Identity = 107/175 (61.14%), Postives = 125/175 (71.43%), Query Frame = 0
BLAST of CsGy1G030910 vs. ExPASy Swiss-Prot
Match: O48897 (Thioredoxin F-type, chloroplastic OS=Brassica napus OX=3708 GN=TRXF PE=2 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 2.5e-47 Identity = 107/178 (60.11%), Postives = 130/178 (73.03%), Query Frame = 0
BLAST of CsGy1G030910 vs. ExPASy Swiss-Prot
Match: O81332 (Thioredoxin F-type, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 3.7e-46 Identity = 111/193 (57.51%), Postives = 132/193 (68.39%), Query Frame = 0
BLAST of CsGy1G030910 vs. NCBI nr
Match: XP_004139092.1 (thioredoxin F-type, chloroplastic [Cucumis sativus] >KGN66631.1 hypothetical protein Csa_007307 [Cucumis sativus]) HSP 1 Score: 350 bits (897), Expect = 2.77e-121 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of CsGy1G030910 vs. NCBI nr
Match: XP_008443649.1 (PREDICTED: thioredoxin F-type, chloroplastic-like [Cucumis melo]) HSP 1 Score: 331 bits (848), Expect = 8.19e-114 Identity = 170/180 (94.44%), Postives = 174/180 (96.67%), Query Frame = 0
BLAST of CsGy1G030910 vs. NCBI nr
Match: XP_038878300.1 (thioredoxin F-type, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 317 bits (813), Expect = 1.29e-107 Identity = 163/180 (90.56%), Postives = 170/180 (94.44%), Query Frame = 0
BLAST of CsGy1G030910 vs. NCBI nr
Match: XP_022157062.1 (thioredoxin F-type, chloroplastic-like [Momordica charantia]) HSP 1 Score: 312 bits (800), Expect = 1.70e-106 Identity = 158/180 (87.78%), Postives = 171/180 (95.00%), Query Frame = 0
BLAST of CsGy1G030910 vs. NCBI nr
Match: XP_022988428.1 (thioredoxin F-type, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 309 bits (791), Expect = 4.00e-105 Identity = 159/180 (88.33%), Postives = 168/180 (93.33%), Query Frame = 0
BLAST of CsGy1G030910 vs. ExPASy TrEMBL
Match: A0A0A0M340 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G651650 PE=4 SV=1) HSP 1 Score: 350 bits (897), Expect = 1.34e-121 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
BLAST of CsGy1G030910 vs. ExPASy TrEMBL
Match: A0A1S3B9B3 (thioredoxin F-type, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487196 PE=4 SV=1) HSP 1 Score: 331 bits (848), Expect = 3.97e-114 Identity = 170/180 (94.44%), Postives = 174/180 (96.67%), Query Frame = 0
BLAST of CsGy1G030910 vs. ExPASy TrEMBL
Match: A0A6J1DTK2 (thioredoxin F-type, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111023873 PE=4 SV=1) HSP 1 Score: 312 bits (800), Expect = 8.23e-107 Identity = 158/180 (87.78%), Postives = 171/180 (95.00%), Query Frame = 0
BLAST of CsGy1G030910 vs. ExPASy TrEMBL
Match: A0A6J1JM96 (thioredoxin F-type, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111485679 PE=4 SV=1) HSP 1 Score: 309 bits (791), Expect = 1.94e-105 Identity = 159/180 (88.33%), Postives = 168/180 (93.33%), Query Frame = 0
BLAST of CsGy1G030910 vs. ExPASy TrEMBL
Match: A0A6J1HAM5 (thioredoxin F-type, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461638 PE=4 SV=1) HSP 1 Score: 305 bits (782), Expect = 4.56e-104 Identity = 157/180 (87.22%), Postives = 167/180 (92.78%), Query Frame = 0
BLAST of CsGy1G030910 vs. TAIR 10
Match: AT5G16400.1 (thioredoxin F2 ) HSP 1 Score: 200.3 bits (508), Expect = 1.3e-51 Identity = 111/182 (60.99%), Postives = 132/182 (72.53%), Query Frame = 0
BLAST of CsGy1G030910 vs. TAIR 10
Match: AT3G02730.1 (thioredoxin F-type 1 ) HSP 1 Score: 190.7 bits (483), Expect = 1.1e-48 Identity = 107/175 (61.14%), Postives = 125/175 (71.43%), Query Frame = 0
BLAST of CsGy1G030910 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 ) HSP 1 Score: 75.1 bits (183), Expect = 6.5e-14 Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 0
BLAST of CsGy1G030910 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 ) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12 Identity = 33/89 (37.08%), Postives = 56/89 (62.92%), Query Frame = 0
BLAST of CsGy1G030910 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 ) HSP 1 Score: 69.3 bits (168), Expect = 3.6e-12 Identity = 30/79 (37.97%), Postives = 53/79 (67.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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