CsGy1G030280 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G030280
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 28535808 .. 28536083 (-)
RNA-Seq ExpressionCsGy1G030280
SyntenyCsGy1G030280
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGAGCTCTCCAGTAAAAGGAGGAAGAGAAAATTGGGAACGTTGTTCGATGAGCTGTTCGTATGGAAGTAAATTGCCTTGTCAGGTTGGTTTTGGTGGTTAGAAGGTCTTCTTAAGTTCATCGGGGTTTTATCTGAAGGGATTGATTGGTGGGATAAGATGGTGTACTCAGTAATCTACTTAACTGTCGAGTCTAGCTGTCGAAATTGCTTTTACTATCATCCGAAGGCAGGTGATGATATTGTTGTGCTGCTTGGCAAGTTCTGTCTCTGA

mRNA sequence

ATGGCCGAGCTCTCCAGTTGGTTTTGGTGGTTAGAAGGTCTTCTTAAGTTCATCGGGGTTTTATCTGAAGGGATTGATTGGTGGGATAAGATGGTGTACTCAGTAATCTACTTAACTGTCGAGTCTAGCTGTCGAAATTGCTTTTACTATCATCCGAAGGCAGGTGATGATATTGTTGTGCTGCTTGGCAAGTTCTGTCTCTGA

Coding sequence (CDS)

ATGGCCGAGCTCTCCAGTTGGTTTTGGTGGTTAGAAGGTCTTCTTAAGTTCATCGGGGTTTTATCTGAAGGGATTGATTGGTGGGATAAGATGGTGTACTCAGTAATCTACTTAACTGTCGAGTCTAGCTGTCGAAATTGCTTTTACTATCATCCGAAGGCAGGTGATGATATTGTTGTGCTGCTTGGCAAGTTCTGTCTCTGA

Protein sequence

MAELSSWFWWLEGLLKFIGVLSEGIDWWDKMVYSVIYLTVESSCRNCFYYHPKAGDDIVVLLGKFCL*
Homology
[Close]
BLAST of CsGy1G030280 vs. NCBI nr
Match: KGN66549.1 (hypothetical protein Csa_007171 [Cucumis sativus])

HSP 1 Score: 129 bits (324), Expect = 1.45e-37
Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0 

Query: 1  MAELSSWFWWLEGLLKFIGVLSEGIDWWDKMVYSVIYLTVESSCRNCFYYHPKAGDDIVV 60
          MAELS      +GLLKFIGVLSEGIDWWDKMVYSVIYLTVESSCRNCFYYHPKAGDDIVV
Sbjct: 1  MAELS------KGLLKFIGVLSEGIDWWDKMVYSVIYLTVESSCRNCFYYHPKAGDDIVV 60

Query: 61 LLGKFCL 67
          LLGKFCL
Sbjct: 61 LLGKFCL 61

[Close]
BLAST of CsGy1G030280 vs. ExPASy TrEMBL
Match: A0A0A0LZW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629060 PE=4 SV=1)

HSP 1 Score: 129 bits (324), Expect = 7.01e-38
Identity = 60/67 (89.55%), Postives = 61/67 (91.04%), Query Frame = 0 

Query: 1  MAELSSWFWWLEGLLKFIGVLSEGIDWWDKMVYSVIYLTVESSCRNCFYYHPKAGDDIVV 60
          MAELS      +GLLKFIGVLSEGIDWWDKMVYSVIYLTVESSCRNCFYYHPKAGDDIVV
Sbjct: 1  MAELS------KGLLKFIGVLSEGIDWWDKMVYSVIYLTVESSCRNCFYYHPKAGDDIVV 60

Query: 61 LLGKFCL 67
          LLGKFCL
Sbjct: 61 LLGKFCL 61

The following BLAST results are available for this feature:
BLAST of CsGy1G030280 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G030280 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66549.11.45e-3789.55hypothetical protein Csa_007171 [Cucumis sativus][more]
BLAST of CsGy1G030280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZW17.01e-3889.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629060 PE=4 SV=1[more]
BLAST of CsGy1G030280 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G030280.2CsGy1G030280.2mRNA