CsGy1G028655 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G028655
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	protochlorophyllide-dependent translocon component 52, chloroplastic-like
Location	Gy14Chr1: 26776344 .. 26779048 (+)
RNA-Seq Expression	CsGy1G028655
Synteny	CsGy1G028655

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGTTGAAAAGTTGAAAGCAGATGGTTTTGTTGGCAAAGACGAAACGCTCCGTCACAAATTTTTTGCACCTTGTGTCTATTATTACTTCACTGATCCAGAGCTGGTTCAAGGAAATGTAGAGAGCAAGAAGGATGGATCTGTATCGTCAACTGCAAATGTAAAGGTATATTAGCATCATCATTACTGCATTTCCATGTCTCTCGCTGATGATTTCTTACATCATCCATCAAGTCAAAAATTTATGCATGATTGACTACAATAAATTGAATTATATCAATAATTCAATACTTTAGAATGTGTTGATTCTTGAATCTGTCATCTGACACTCCAAACGACCCACTCTAGTGAAGCGTCAAGGCAATGCCCCCCAAAGCCTAATTTATATTCGTATTTATGCTATTCACACTATTTACATTTTTTTGCACAATATAAACTCCCCAACTCTACTAGCACCTCTGAGTCTGTAATATGATATTTTCTCTCTTACAATAAACTAATCTCTCTCTGCTTGTAAACGTAGCTAATGTACTGTTAGTGAACTATGTAAATCTTACGTTGATTTCGTCGTTCTTTACAATTTCTTTCTAAAAAGCACGGACACGGATACGAGACACGAATACGACACGAAACGCTATCCAAACTAAAGTGTCTGTGCATCTTAGTTTTCTTGCTTTGTTTGGTTGTTGATTTCCCCACACTTCTCCTCATGCTAAATCACCGGTCAACCCTCATATGTGAGGTTGAAGTTTTATAGAGGTTCAATTATAGGATCTTGTGCATTTATAACATGCTAAATCACTGATCAACCTAAAAACTTAAGCGGATAGGTTACGACCAATTTCATTTAAAGCAATACTTCAACAGCAATCTAGACTTGGATTCTTAAACTGCATTTTCTTGTTTTTTCTTCTTTTTGCTGGTGATTCGATCTGATTGATGAAAAGTTTTGTTGGTTTAGAAACCGCCAACTGAAATCTCGAGAAGAACATTCTTGGCTTTTTTCTGCATCCCGGTTAGTCCAGGTAAAAGCAGATTGATCTGGGCCTTCCCTATTAACTTGGATAAATGGGTACATTTTATTGTCCCACGATGGATTTTTCATATAGTACAGAACTTGATTCTAGATTCAGACATGTATCTTCTTCATGTTGAGGTAAGACGTTCATTTTGTTTGTTGATATTTTCTTCGCCTGTCGAATACAGTTCCTAATGAAGTTTGTTCTGAATTTTAGGAGCATAAATATGAGGAAATAGGCACTTCCAATTGGCATAAAGCTTGTTATGTGCCAGTAAAATCAGATGCTTTCGTTGTTGGATTTAGAAGATGGTTGAACAAGTATGCTGGTGGTCAAGTTGATTGGGGAGGCAAATATTCTGGCTCCCTTCCTTCACTTTCTCCTAGAGCACTAGTGTTAGAAAGGTATCCTCTGATTTCTAAAACTCATCTTCCCTACTATTTTTAGAGGGTAAATTTAGTCTGCCTACCATAAGGATTTGGTTTTTAGTTTTCATGTTTTCGAAATTTTTGTTTCTTTTCTCCTAAATTTCATGATATGCCTTTTACATTTCTAGAAGAAAAACTTGAATTGTTAGTCAAATTATAGAACCAGAACAAGTTTTTGGAAACTAATTTTTATGGTTTGGCTTTTGAAAATATTGGTGAATATTGGATAACGAAATAAAAAACATGGTGATTGCAATGTATTGAGACAATTTAAAAGAATTGCAAATCTAGCAACATTTTGATCTAGGGACTTCAAAGTGGGCTTCCTAATCACAACTGTTATCGGTCAGATTTTGTGTTTCACTTGATACATGGAGATGGATTGTTGACCCCTCTTCATCTTTTAACGTAAAATCTCTCGTGGATCATTCGATGAATTTTGAGAATCCTTCTAAGTGTTGTCAATTCTACTGATTGTCTTCAATGTCGTATGCCTTATATGTGTATCTCTTCATCTTGGTGTGTTACGTGACAGAACCATTTTGAATCCCCTACTCATCTGCTTATGCATTGTTGCTTGCCTCCTAAATCAGAATACTATTTTAGGGTCTTTACCCCTAACTCATCTGCTTTTGATTGGTCTTTAGCCTACTCTTGACAATAGTTTTGACATTTCGGCTTCCATTTTAGTGGGCCATCCACTTCATGGTAATAAAGACTTTTTCGCTGTCCATTTCGTGTGCTTTGTTCTCGACATTATAGGATGAGTGTAATAAGCGTCTCTTTAAAGATTCATCTTCTTGTTTTGATCATAGTTTTATGAATTTAATTTTGTCCTACTAGGTTGCACTGGTCCAAAACTAGCACCCATTTACAAACTTGGATCTTTCTTATTTAGTTTCCAACTAGAAATCTCTTTTGTCATCACTTAGAGGTGTTCGGAGTGTCTCCTTATTTCATTTATTCAACGAAACGTTTCTTCTCTGAAAAAAAAAATCAGGTACTGGAGCCATGTGGTGAATTGCAAGAGCTGCAATGGAGCATATAAAGCTCTAAATAAAGCTGAGGTGAGTCTTCAGGTGATCTCCATAGCTGCAATTGGAGTTTTGGCATTGACACAAAATGGAGTAATTTCAGCAAAAGTTAGAGCCACCATTTTCATCATTGCAATAGTCTGTTTTGCTGCTTCAAAGTGGTTATCCCATTTCATTCAAGAAACTTTCCGCTTCCGTGACTACATTCATGCCTTGGTTTGA

mRNA sequence

ATGGTCGTTGAAAAGTTGAAAGCAGATGGTTTTGTTGGCAAAGACGAAACGCTCCGTCACAAATTTTTTGCACCTTGTGTCTATTATTACTTCACTGATCCAGAGCTGGTTCAAGGAAATGTAGAGAGCAAGAAGGATGGATCTGTATCGTCAACTGCAAATGTAAAGAAACCGCCAACTGAAATCTCGAGAAGAACATTCTTGGCTTTTTTCTGCATCCCGGTTAGTCCAGGTAAAAGCAGATTGATCTGGGCCTTCCCTATTAACTTGGATAAATGGGTACATTTTATTGTCCCACGATGGATTTTTCATATAGTACAGAACTTGATTCTAGATTCAGACATGTATCTTCTTCATGTTGAGGAGCATAAATATGAGGAAATAGGCACTTCCAATTGGCATAAAGCTTGTTATGTGCCAGTAAAATCAGATGCTTTCGTTGTTGGATTTAGAAGATGGTTGAACAAGTATGCTGGTGGTCAAGTTGATTGGGGAGGCAAATATTCTGGCTCCCTTCCTTCACTTTCTCCTAGAGCACTAGTGTTAGAAAGGTACTGGAGCCATGTGGTGAATTGCAAGAGCTGCAATGGAGCATATAAAGCTCTAAATAAAGCTGAGGTGAGTCTTCAGGTGATCTCCATAGCTGCAATTGGAGTTTTGGCATTGACACAAAATGGAGTAATTTCAGCAAAAGTTAGAGCCACCATTTTCATCATTGCAATAGTCTGTTTTGCTGCTTCAAAGTGGTTATCCCATTTCATTCAAGAAACTTTCCGCTTCCGTGACTACATTCATGCCTTGGTTTGA

Coding sequence (CDS)

ATGGTCGTTGAAAAGTTGAAAGCAGATGGTTTTGTTGGCAAAGACGAAACGCTCCGTCACAAATTTTTTGCACCTTGTGTCTATTATTACTTCACTGATCCAGAGCTGGTTCAAGGAAATGTAGAGAGCAAGAAGGATGGATCTGTATCGTCAACTGCAAATGTAAAGAAACCGCCAACTGAAATCTCGAGAAGAACATTCTTGGCTTTTTTCTGCATCCCGGTTAGTCCAGGTAAAAGCAGATTGATCTGGGCCTTCCCTATTAACTTGGATAAATGGGTACATTTTATTGTCCCACGATGGATTTTTCATATAGTACAGAACTTGATTCTAGATTCAGACATGTATCTTCTTCATGTTGAGGAGCATAAATATGAGGAAATAGGCACTTCCAATTGGCATAAAGCTTGTTATGTGCCAGTAAAATCAGATGCTTTCGTTGTTGGATTTAGAAGATGGTTGAACAAGTATGCTGGTGGTCAAGTTGATTGGGGAGGCAAATATTCTGGCTCCCTTCCTTCACTTTCTCCTAGAGCACTAGTGTTAGAAAGGTACTGGAGCCATGTGGTGAATTGCAAGAGCTGCAATGGAGCATATAAAGCTCTAAATAAAGCTGAGGTGAGTCTTCAGGTGATCTCCATAGCTGCAATTGGAGTTTTGGCATTGACACAAAATGGAGTAATTTCAGCAAAAGTTAGAGCCACCATTTTCATCATTGCAATAGTCTGTTTTGCTGCTTCAAAGTGGTTATCCCATTTCATTCAAGAAACTTTCCGCTTCCGTGACTACATTCATGCCTTGGTTTGA

Protein sequence

MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPTEISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHVEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPRALVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIAIVCFAASKWLSHFIQETFRFRDYIHALV*

Homology

[Close]

BLAST of CsGy1G028655 vs. ExPASy Swiss-Prot
Match: Q8W496 (Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTC52 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.3e-68
Identity = 136/267 (50.94%), Postives = 166/267 (62.17%), Query Frame = 0


Query: 3   VEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPTEI 62
           V+KL   GF  K E     F APCVY   TDP L +   E     +    A  K      
Sbjct: 301 VKKLDNKGFFSKQEWGYSNFIAPCVYRSSTDP-LPEQEHEYPAPAASDKAALSK------ 360

Query: 63  SRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHVEE 122
            RR  L F CIPVSPG+SRLIW FP N   ++  IVPRW+FHI QN ILDSD++LLHVEE
Sbjct: 361 -RRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQNTILDSDLHLLHVEE 420

Query: 123 HKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSG-SLPSLSPRALV 182
            K  E G  NW KAC++P KSDA VV FRRW NKY+  +VDW GK+    LP   PR  +
Sbjct: 421 RKILERGPENWQKACFIPTKSDANVVTFRRWFNKYSEARVDWRGKFDPFLLPPTPPREQL 480

Query: 183 LERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIAI 242
            +RYWSHV NC SC  A+K LN  EV LQ+ S+A IGV+A+ +   +S   R  + + A+
Sbjct: 481 FDRYWSHVENCSSCKKAHKYLNALEVILQIASVAMIGVMAVLKQTTMSNVARIAVLVAAV 540

Query: 243 VCFAASKWLSHFIQETFRFRDYIHALV 269
           + FAASKWLSHFI +TF + DY HA+V
Sbjct: 541 LSFAASKWLSHFIYKTFHYHDYNHAVV 559

[Close]

BLAST of CsGy1G028655 vs. ExPASy Swiss-Prot
Match: Q0DV66 (Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PAO PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.5e-19
Identity = 70/217 (32.26%), Postives = 102/217 (47.00%), Query Frame = 0


Query: 67  FLAFFCIPVSPGKSRLI-------WAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLH 126
           ++  F IP++PGK+R I       + F +    W   +VPRW  H   NL+ D DM +L 
Sbjct: 317 WICSFNIPMAPGKTRSIVCSARNFFQFSMPGKAWWQ-LVPRWYEHWTSNLVYDGDMIVLQ 376

Query: 127 VEEHKYEEIG-------TSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGS- 186
            +E  +              + K  + P ++D FV+ FR WL K+   Q DW G  S   
Sbjct: 377 GQEKIFLSASKESSADINQQYTKITFTPTQADRFVLAFRAWLRKFGNSQPDWFGNPSQEV 436

Query: 187 LPS--LSPRALVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVIS 246
           LPS  LS R + L+RY  H + C SC GAY A      +LQ + + A      T      
Sbjct: 437 LPSTVLSKREM-LDRYEQHTLKCSSCKGAYNAFQ----TLQKVFMGATVAFCATAGIPAD 496

Query: 247 AKVRATIFIIAIVCFAASKWLSHFIQETFRFRDYIHA 267
            + R  +   A+V  AA  +  + +Q+ F F DY+HA
Sbjct: 497 VQFRLLLAAAALVS-AAVAYAFYTLQKNFVFVDYVHA 526

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BLAST of CsGy1G028655 vs. ExPASy Swiss-Prot
Match: O49931 (Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07
Identity = 51/183 (27.87%), Postives = 78/183 (42.62%), Query Frame = 0


Query: 70  FFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHVEEH--KYEE 129
           F C P   GKS LI  F       +  + P W FH   + + + DM  L  +      E+
Sbjct: 333 FLCRPTGQGKSMLIVRFGATKRSPLIKLFPEWYFHQNASKVFEQDMGFLSSQNEILLKEK 392

Query: 130 IGTSNWHKACYVPVK-SDAFVVGFRRWLNKYAGGQVDWGGKYSGSLP------SLSPRAL 189
           + T    K  Y+ +K SD +V  +R+W++K   G     G  + SLP        +P  L
Sbjct: 393 VPT----KELYLNLKSSDTWVAEYRKWMDKVGHGMPYHFGHSTISLPEEPAVVEHAPAGL 452

Query: 190 V---------------------LERYWSHVVNCKSCNGAYKALN--KAEVSLQVISIAAI 221
           V                       RY+ HV++CK C+ A KA    K  +S  V+++AA+
Sbjct: 453 VAGLSASSPAKGGIGTMHAPNLANRYFRHVIHCKGCSSAIKAFQIWKNVLSGVVVALAAL 511

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BLAST of CsGy1G028655 vs. NCBI nr
Match: KGN66706.2 (hypothetical protein Csa_007259 [Cucumis sativus])

HSP 1 Score: 549 bits (1414), Expect = 1.71e-193
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPT 60
           MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPT
Sbjct: 236 MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPT 295

Query: 61  EISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHV 120
           EISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHV
Sbjct: 296 EISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHV 355

Query: 121 EEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPRAL 180
           EEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPRAL
Sbjct: 356 EEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPRAL 415

Query: 181 VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIA 240
           VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIA
Sbjct: 416 VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIA 475

Query: 241 IVCFAASKWLSHFIQETFRFRDYIHALV 268
           IVCFAASKWLSHFIQETFRFRDYIHALV
Sbjct: 476 IVCFAASKWLSHFIQETFRFRDYIHALV 503

[Close]

BLAST of CsGy1G028655 vs. NCBI nr
Match: XP_011660063.2 (protochlorophyllide-dependent translocon component 52, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 549 bits (1414), Expect = 5.95e-193
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPT 60
           MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPT
Sbjct: 272 MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPT 331

Query: 61  EISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHV 120
           EISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHV
Sbjct: 332 EISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHV 391

Query: 121 EEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPRAL 180
           EEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPRAL
Sbjct: 392 EEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPRAL 451

Query: 181 VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIA 240
           VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIA
Sbjct: 452 VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIA 511

Query: 241 IVCFAASKWLSHFIQETFRFRDYIHALV 268
           IVCFAASKWLSHFIQETFRFRDYIHALV
Sbjct: 512 IVCFAASKWLSHFIQETFRFRDYIHALV 539

[Close]

BLAST of CsGy1G028655 vs. NCBI nr
Match: XP_031741410.1 (protochlorophyllide-dependent translocon component 52, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 549 bits (1414), Expect = 8.98e-193
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPT 60
           MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPT
Sbjct: 284 MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPT 343

Query: 61  EISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHV 120
           EISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHV
Sbjct: 344 EISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHV 403

Query: 121 EEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPRAL 180
           EEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPRAL
Sbjct: 404 EEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPRAL 463

Query: 181 VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIA 240
           VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIA
Sbjct: 464 VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIA 523

Query: 241 IVCFAASKWLSHFIQETFRFRDYIHALV 268
           IVCFAASKWLSHFIQETFRFRDYIHALV
Sbjct: 524 IVCFAASKWLSHFIQETFRFRDYIHALV 551

[Close]

BLAST of CsGy1G028655 vs. NCBI nr
Match: KAA0055706.1 (protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa])

HSP 1 Score: 507 bits (1306), Expect = 6.06e-177
Identity = 249/270 (92.22%), Postives = 255/270 (94.44%), Query Frame = 0


Query: 1   MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVES--KKDGSVSSTANVKKP 60
           MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVES  K DGS+SSTANVKKP
Sbjct: 243 MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDGSLSSTANVKKP 302

Query: 61  PTEISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLL 120
           PTEISRRTFLAFFCIPVSPGKSRLIWAFP N DKWVH IVPRW+FHIVQNLILDSDMYLL
Sbjct: 303 PTEISRRTFLAFFCIPVSPGKSRLIWAFPNNFDKWVHSIVPRWMFHIVQNLILDSDMYLL 362

Query: 121 HVEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPR 180
            VEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLP L PR
Sbjct: 363 RVEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPPLPPR 422

Query: 181 ALVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFI 240
             VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIG LALT++GV SAKVRATIFI
Sbjct: 423 EQVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGALALTKSGVSSAKVRATIFI 482

Query: 241 IAIVCFAASKWLSHFIQETFRFRDYIHALV 268
           IAI+CFAASKWLSHFI +TFRF DYIHALV
Sbjct: 483 IAILCFAASKWLSHFIHKTFRFHDYIHALV 512

[Close]

BLAST of CsGy1G028655 vs. NCBI nr
Match: XP_008451032.1 (PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-like [Cucumis melo])

HSP 1 Score: 507 bits (1306), Expect = 1.51e-176
Identity = 249/270 (92.22%), Postives = 255/270 (94.44%), Query Frame = 0


Query: 1   MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVES--KKDGSVSSTANVKKP 60
           MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVES  K DGS+SSTANVKKP
Sbjct: 270 MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDGSLSSTANVKKP 329

Query: 61  PTEISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLL 120
           PTEISRRTFLAFFCIPVSPGKSRLIWAFP N DKWVH IVPRW+FHIVQNLILDSDMYLL
Sbjct: 330 PTEISRRTFLAFFCIPVSPGKSRLIWAFPNNFDKWVHSIVPRWMFHIVQNLILDSDMYLL 389

Query: 121 HVEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPR 180
            VEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLP L PR
Sbjct: 390 RVEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPPLPPR 449

Query: 181 ALVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFI 240
             VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIG LALT++GV SAKVRATIFI
Sbjct: 450 EQVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGALALTKSGVSSAKVRATIFI 509

Query: 241 IAIVCFAASKWLSHFIQETFRFRDYIHALV 268
           IAI+CFAASKWLSHFI +TFRF DYIHALV
Sbjct: 510 IAILCFAASKWLSHFIHKTFRFHDYIHALV 539

[Close]

BLAST of CsGy1G028655 vs. ExPASy TrEMBL
Match: A0A0A0LZS1 (PaO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600170 PE=4 SV=1)

HSP 1 Score: 546 bits (1408), Expect = 1.41e-196
Identity = 267/268 (99.63%), Postives = 267/268 (99.63%), Query Frame = 0


Query: 1   MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPT 60
           MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPT
Sbjct: 1   MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPT 60

Query: 61  EISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHV 120
           EISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHV
Sbjct: 61  EISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHV 120

Query: 121 EEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPRAL 180
           EEHKYEEIG SNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPRAL
Sbjct: 121 EEHKYEEIGPSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPRAL 180

Query: 181 VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIA 240
           VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIA
Sbjct: 181 VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIA 240

Query: 241 IVCFAASKWLSHFIQETFRFRDYIHALV 268
           IVCFAASKWLSHFIQETFRFRDYIHALV
Sbjct: 241 IVCFAASKWLSHFIQETFRFRDYIHALV 268

[Close]

BLAST of CsGy1G028655 vs. ExPASy TrEMBL
Match: A0A5A7UN46 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00880 PE=4 SV=1)

HSP 1 Score: 507 bits (1306), Expect = 2.94e-177
Identity = 249/270 (92.22%), Postives = 255/270 (94.44%), Query Frame = 0


Query: 1   MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVES--KKDGSVSSTANVKKP 60
           MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVES  K DGS+SSTANVKKP
Sbjct: 243 MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDGSLSSTANVKKP 302

Query: 61  PTEISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLL 120
           PTEISRRTFLAFFCIPVSPGKSRLIWAFP N DKWVH IVPRW+FHIVQNLILDSDMYLL
Sbjct: 303 PTEISRRTFLAFFCIPVSPGKSRLIWAFPNNFDKWVHSIVPRWMFHIVQNLILDSDMYLL 362

Query: 121 HVEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPR 180
            VEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLP L PR
Sbjct: 363 RVEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPPLPPR 422

Query: 181 ALVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFI 240
             VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIG LALT++GV SAKVRATIFI
Sbjct: 423 EQVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGALALTKSGVSSAKVRATIFI 482

Query: 241 IAIVCFAASKWLSHFIQETFRFRDYIHALV 268
           IAI+CFAASKWLSHFI +TFRF DYIHALV
Sbjct: 483 IAILCFAASKWLSHFIHKTFRFHDYIHALV 512

[Close]

BLAST of CsGy1G028655 vs. ExPASy TrEMBL
Match: A0A1S3BRB5 (protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103492438 PE=4 SV=1)

HSP 1 Score: 507 bits (1306), Expect = 7.32e-177
Identity = 249/270 (92.22%), Postives = 255/270 (94.44%), Query Frame = 0


Query: 1   MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVES--KKDGSVSSTANVKKP 60
           MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVES  K DGS+SSTANVKKP
Sbjct: 270 MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESSSKNDGSLSSTANVKKP 329

Query: 61  PTEISRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLL 120
           PTEISRRTFLAFFCIPVSPGKSRLIWAFP N DKWVH IVPRW+FHIVQNLILDSDMYLL
Sbjct: 330 PTEISRRTFLAFFCIPVSPGKSRLIWAFPNNFDKWVHSIVPRWMFHIVQNLILDSDMYLL 389

Query: 121 HVEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSPR 180
            VEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLP L PR
Sbjct: 390 RVEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPPLPPR 449

Query: 181 ALVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFI 240
             VLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIG LALT++GV SAKVRATIFI
Sbjct: 450 EQVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGALALTKSGVSSAKVRATIFI 509

Query: 241 IAIVCFAASKWLSHFIQETFRFRDYIHALV 268
           IAI+CFAASKWLSHFI +TFRF DYIHALV
Sbjct: 510 IAILCFAASKWLSHFIHKTFRFHDYIHALV 539

[Close]

BLAST of CsGy1G028655 vs. ExPASy TrEMBL
Match: A0A5A7UKJ8 (Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00860 PE=4 SV=1)

HSP 1 Score: 447 bits (1150), Expect = 6.11e-157
Identity = 222/271 (81.92%), Postives = 239/271 (88.19%), Query Frame = 0


Query: 1   MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVES--KKDGSVSSTANVKKP 60
           +VVEKLKADGFVG+ E +RHKFFAPCVYY+F+DPELVQGNVES  K D +VSSTANVKKP
Sbjct: 18  LVVEKLKADGFVGRHERIRHKFFAPCVYYFFSDPELVQGNVESSSKNDEAVSSTANVKKP 77

Query: 61  PTEIS-RRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYL 120
           PTEIS RR+FL F+CIPVSPGKSRLIWAFP N  KW+++IVPRW+FHI QNLILDSDMY 
Sbjct: 78  PTEISQRRSFLVFYCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQNLILDSDMYF 137

Query: 121 LHVEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSP 180
           L VEEHK EEIG SNWHKACYVPVKSDA VVGFRRWLNKYAGG+VDWGGKYSGSLP L P
Sbjct: 138 LRVEEHKLEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGRVDWGGKYSGSLPPLPP 197

Query: 181 RALVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIF 240
           R  V ERY SHVVNCKSCNGAYKALN AEVSLQ ISIAAIG LALT+NGVISA VRATI 
Sbjct: 198 REEVFERYRSHVVNCKSCNGAYKALNIAEVSLQAISIAAIGALALTKNGVISATVRATIV 257

Query: 241 IIAIVCFAASKWLSHFIQETFRFRDYIHALV 268
            IAI+CFAASKWLSHFI +TF F+DY HALV
Sbjct: 258 TIAILCFAASKWLSHFIHKTFHFQDYNHALV 288

[Close]

BLAST of CsGy1G028655 vs. ExPASy TrEMBL
Match: A0A0A0LX74 (Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600180 PE=4 SV=1)

HSP 1 Score: 449 bits (1154), Expect = 1.36e-153
Identity = 220/271 (81.18%), Postives = 239/271 (88.19%), Query Frame = 0


Query: 1   MVVEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVES--KKDGSVSSTANVKKP 60
           +VVEKLKADGFVG+ E LRHKFFAPCVYY+FTDPELVQGNVES  K D +VSSTANVKKP
Sbjct: 284 LVVEKLKADGFVGRHERLRHKFFAPCVYYFFTDPELVQGNVESSTKNDEAVSSTANVKKP 343

Query: 61  PTEIS-RRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYL 120
           PTEIS RR+FL FFCIPVSPGKSRLIWAFP N  KW+++IVPRW+FHI QNLILDSDMY 
Sbjct: 344 PTEISQRRSFLVFFCIPVSPGKSRLIWAFPRNFGKWMNYIVPRWMFHIGQNLILDSDMYF 403

Query: 121 LHVEEHKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSGSLPSLSP 180
           L VEEHKYEEIG SNWHKACYVPVKSDA VVGFRRWLNKYAGG+VDWGGKYSGSLP + P
Sbjct: 404 LRVEEHKYEEIGPSNWHKACYVPVKSDALVVGFRRWLNKYAGGRVDWGGKYSGSLPPIPP 463

Query: 181 RALVLERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIF 240
           R  V ERYWSHVVNCKSCNGAYKALN AEVSLQ IS+AAIG LAL ++GV+SA VRATI 
Sbjct: 464 REQVFERYWSHVVNCKSCNGAYKALNIAEVSLQAISMAAIGALALIKHGVLSATVRATIV 523

Query: 241 IIAIVCFAASKWLSHFIQETFRFRDYIHALV 268
            +AI+CFAASKWLSHFI +TF F+ Y HALV
Sbjct: 524 TVAILCFAASKWLSHFIHKTFHFQVYNHALV 554

[Close]

BLAST of CsGy1G028655 vs. TAIR 10
Match: AT4G25650.1 (ACD1-like )

HSP 1 Score: 261.2 bits (666), Expect = 9.5e-70
Identity = 136/267 (50.94%), Postives = 166/267 (62.17%), Query Frame = 0


Query: 3   VEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPTEI 62
           V+KL   GF  K E     F APCVY   TDP L +   E     +    A  K      
Sbjct: 278 VKKLDNKGFFSKQEWGYSNFIAPCVYRSSTDP-LPEQEHEYPAPAASDKAALSK------ 337

Query: 63  SRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHVEE 122
            RR  L F CIPVSPG+SRLIW FP N   ++  IVPRW+FHI QN ILDSD++LLHVEE
Sbjct: 338 -RRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQNTILDSDLHLLHVEE 397

Query: 123 HKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSG-SLPSLSPRALV 182
            K  E G  NW KAC++P KSDA VV FRRW NKY+  +VDW GK+    LP   PR  +
Sbjct: 398 RKILERGPENWQKACFIPTKSDANVVTFRRWFNKYSEARVDWRGKFDPFLLPPTPPREQL 457

Query: 183 LERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIAI 242
            +RYWSHV NC SC  A+K LN  EV LQ+ S+A IGV+A+ +   +S   R  + + A+
Sbjct: 458 FDRYWSHVENCSSCKKAHKYLNALEVILQIASVAMIGVMAVLKQTTMSNVARIAVLVAAV 517

Query: 243 VCFAASKWLSHFIQETFRFRDYIHALV 269
           + FAASKWLSHFI +TF + DY HA+V
Sbjct: 518 LSFAASKWLSHFIYKTFHYHDYNHAVV 536

[Close]

BLAST of CsGy1G028655 vs. TAIR 10
Match: AT4G25650.2 (ACD1-like )

HSP 1 Score: 261.2 bits (666), Expect = 9.5e-70
Identity = 136/267 (50.94%), Postives = 166/267 (62.17%), Query Frame = 0


Query: 3   VEKLKADGFVGKDETLRHKFFAPCVYYYFTDPELVQGNVESKKDGSVSSTANVKKPPTEI 62
           V+KL   GF  K E     F APCVY   TDP L +   E     +    A  K      
Sbjct: 301 VKKLDNKGFFSKQEWGYSNFIAPCVYRSSTDP-LPEQEHEYPAPAASDKAALSK------ 360

Query: 63  SRRTFLAFFCIPVSPGKSRLIWAFPINLDKWVHFIVPRWIFHIVQNLILDSDMYLLHVEE 122
            RR  L F CIPVSPG+SRLIW FP N   ++  IVPRW+FHI QN ILDSD++LLHVEE
Sbjct: 361 -RRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQNTILDSDLHLLHVEE 420

Query: 123 HKYEEIGTSNWHKACYVPVKSDAFVVGFRRWLNKYAGGQVDWGGKYSG-SLPSLSPRALV 182
            K  E G  NW KAC++P KSDA VV FRRW NKY+  +VDW GK+    LP   PR  +
Sbjct: 421 RKILERGPENWQKACFIPTKSDANVVTFRRWFNKYSEARVDWRGKFDPFLLPPTPPREQL 480

Query: 183 LERYWSHVVNCKSCNGAYKALNKAEVSLQVISIAAIGVLALTQNGVISAKVRATIFIIAI 242
            +RYWSHV NC SC  A+K LN  EV LQ+ S+A IGV+A+ +   +S   R  + + A+
Sbjct: 481 FDRYWSHVENCSSCKKAHKYLNALEVILQIASVAMIGVMAVLKQTTMSNVARIAVLVAAV 540

Query: 243 VCFAASKWLSHFIQETFRFRDYIHALV 269
           + FAASKWLSHFI +TF + DY HA+V
Sbjct: 541 LSFAASKWLSHFIYKTFHYHDYNHAVV 559

The following BLAST results are available for this feature:

BLAST of CsGy1G028655 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W496	1.3e-68	50.94	Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidop...	[more]
Q0DV66	2.5e-19	32.26	Pheophorbide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]
O49931	1.0e-07	27.87	Protein TIC 55, chloroplastic OS=Pisum sativum OX=3888 GN=TIC55 PE=1 SV=1	[more]

BLAST of CsGy1G028655 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN66706.2	1.71e-193	100.00	hypothetical protein Csa_007259 [Cucumis sativus]	[more]
XP_011660063.2	5.95e-193	100.00	protochlorophyllide-dependent translocon component 52, chloroplastic isoform X2 ...	[more]
XP_031741410.1	8.98e-193	100.00	protochlorophyllide-dependent translocon component 52, chloroplastic isoform X1 ...	[more]
KAA0055706.1	6.06e-177	92.22	protochlorophyllide-dependent translocon component 52 [Cucumis melo var. makuwa]	[more]
XP_008451032.1	1.51e-176	92.22	PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic-...	[more]

BLAST of CsGy1G028655 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZS1	1.41e-196	99.63	PaO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600170 PE=4 SV...	[more]
A0A5A7UN46	2.94e-177	92.22	Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuw...	[more]
A0A1S3BRB5	7.32e-177	92.22	protochlorophyllide-dependent translocon component 52, chloroplastic-like OS=Cuc...	[more]
A0A5A7UKJ8	6.11e-157	81.92	Protochlorophyllide-dependent translocon component 52 OS=Cucumis melo var. makuw...	[more]
A0A0A0LX74	1.36e-153	81.18	Rieske domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G600180 PE=4...	[more]

BLAST of CsGy1G028655 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25650.1	9.5e-70	50.94	ACD1-like	[more]
AT4G25650.2	9.5e-70	50.94	ACD1-like	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.380.10		coord: 6..162 e-value: 1.2E-5 score: 27.2
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 60..266
None	No IPR available	PANTHER	PTHR21266:SF43	SUBFAMILY NOT NAMED	coord: 60..266
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 61..163
IPR013626	Pheophorbide a oxygenase	PFAM	PF08417	PaO	coord: 22..129 e-value: 3.9E-26 score: 91.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G028655.1	CsGy1G028655.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031967	organelle envelope
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity
molecular_function	GO:0046872	metal ion binding