|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGCAAAAGGTAAAAACGAACCTGAATCGAGTAGCAATGAAGCTGGAGAAAGTGTTGAATGACAATAATCAATCAAAAACTAAGAACCCCGATTGGGGAATGAAGCTGAAATCGGAAAAATCCGGGGTTGAGATTGTTGAGCAGAAACAGTGAATTGTTTCCCTTATATAAAAAAAGGTGGTGAATGAAGAAACCGAATAGGAAAAGGAATAGAATTTGAAGAAATTCAAAATCAAGGCGTGGGTTCAGTCCCCACAACCAAAAAGTTGATGAATTTATTGAAAGTTCCATTCGAAAAATCGGGGATTTTGATCCTTTGTTCTTTCTGCTCAATGATTTGAAATCTCATTTTTCATGA mRNA sequence ATGCAAAAGGTAAAAACGAACCTGAATCGAGTAGCAATGAAGCTGGAGAAAGTGTTGAATGACAATAATCAATCAAAAACTAAGAACCCCGATTGGGGAATGAAGCTGAAATCGGAAAAATCCGGGGTTGAGATTGTTGAGCAGAAACATCCCCACAACCAAAAAGTTGATGAATTTATTGAAAGTTCCATTCGAAAAATCGGGGATTTTGATCCTTTGTTCTTTCTGCTCAATGATTTGAAATCTCATTTTTCATGA Coding sequence (CDS) ATGCAAAAGGTAAAAACGAACCTGAATCGAGTAGCAATGAAGCTGGAGAAAGTGTTGAATGACAATAATCAATCAAAAACTAAGAACCCCGATTGGGGAATGAAGCTGAAATCGGAAAAATCCGGGGTTGAGATTGTTGAGCAGAAACATCCCCACAACCAAAAAGTTGATGAATTTATTGAAAGTTCCATTCGAAAAATCGGGGATTTTGATCCTTTGTTCTTTCTGCTCAATGATTTGAAATCTCATTTTTCATGA Protein sequence MQKVKTNLNRVAMKLEKVLNDNNQSKTKNPDWGMKLKSEKSGVEIVEQKHPHNQKVDEFIESSIRKIGDFDPLFFLLNDLKSHFS*
Homology
BLAST of CsGy1G028285 vs. NCBI nr
Match: KAE8653467.1 (hypothetical protein Csa_007693 [Cucumis sativus]) HSP 1 Score: 169 bits (427), Expect = 1.16e-52 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 Query: 1 MQKVKTNLNRVAMKLEKVLNDNNQSKTKNPDWGMKLKSEKSGVEIVEQKHPHNQKVDEFI 60 MQKVKTNLNRVAMKLEKVLNDNNQSKTKNPDWGMKLKSEKSGVEIVEQKHPHNQKVDEFI Sbjct: 1 MQKVKTNLNRVAMKLEKVLNDNNQSKTKNPDWGMKLKSEKSGVEIVEQKHPHNQKVDEFI 60
Query: 61 ESSIRKIGDFDPLFFLLNDLKSHFS 85 ESSIRKIGDFDPLFFLLNDLKSHFS Sbjct: 61 ESSIRKIGDFDPLFFLLNDLKSHFS 85
BLAST of CsGy1G028285 vs. ExPASy TrEMBL
Match: A0A0A0LZ59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598350 PE=4 SV=1) HSP 1 Score: 148 bits (373), Expect = 6.86e-45 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 Query: 13 MKLEKVLNDNNQSKTKNPDWGMKLKSEKSGVEIVEQKHPHNQKVDEFIESSIRKIGDFDP 72 MKLEKVLNDNNQSKTKNPDWGMKLKSEKSGVEIVEQKHPHNQKVDEFIESSIRKIGDFDP Sbjct: 1 MKLEKVLNDNNQSKTKNPDWGMKLKSEKSGVEIVEQKHPHNQKVDEFIESSIRKIGDFDP 60
Query: 73 LFFLLNDLKSHFS 85 LFFLLNDLKSHFS Sbjct: 61 LFFLLNDLKSHFS 73
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAE8653467.1 | 1.16e-52 | 100.00 | hypothetical protein Csa_007693 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LZ59 | 6.86e-45 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598350 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
|