CsGy1G027255 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G027255
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 25645434 .. 25645963 (-)
RNA-Seq ExpressionCsGy1G027255
SyntenyCsGy1G027255
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAATATTCCACGGAATTTCCAACCAGGCAAGATCATACCGAGATAGTTACATTGGGATGGAGAACCAGAGTAGTGTGAATACGATTCTCAAAATCCCATTCACATAACTCCAATTTTTGATCCAGGCCGTTGCGTTCTTATAGGTGGCCTATTCATTGTAAAATAGTTTCCGTTCGTTCTCACCATTCATTTCATTATATATGTTCTTTTTACAAATTGAGTCACACAGTTGTTCTATCAACCCTAAAAGTAATGTAGTTCACAATTTTTTAGTGTATCCAGGCCATTTTCAGTTCATAGAGGCCCAGATGGTGTACAAGATTTGACTTGTTTTTCATAACTCACGCAGCTTGATTTTCGGTCATATCAACTTGGGGAGCTAGGAGCTGTCTCAATGACTTGCAAGGTAATACCTCTGCATTTCCAATTGTTGATGGGTCCAACATCATTGAAATTTATAGCCAAATTGAAAATTGATACTGCTCCCGCTCCCCAAACAAAGGACCCAAAAACTGTTACAAAGTAA

mRNA sequence

ATGCCAATATTCCACGGAATTTCCAACCAGGCAAGATCATACCGAGATAGTTACATTGGGATGGAGAACCAGAGTAGTCTTGATTTTCGGTCATATCAACTTGGGGAGCTAGGAGCTGTCTCAATGACTTGCAAGGTAATACCTCTGCATTTCCAATTGTTGATGGGTCCAACATCATTGAAATTTATAGCCAAATTGAAAATTGATACTGCTCCCGCTCCCCAAACAAAGGACCCAAAAACTGTTACAAAGTAA

Coding sequence (CDS)

ATGCCAATATTCCACGGAATTTCCAACCAGGCAAGATCATACCGAGATAGTTACATTGGGATGGAGAACCAGAGTAGTCTTGATTTTCGGTCATATCAACTTGGGGAGCTAGGAGCTGTCTCAATGACTTGCAAGGTAATACCTCTGCATTTCCAATTGTTGATGGGTCCAACATCATTGAAATTTATAGCCAAATTGAAAATTGATACTGCTCCCGCTCCCCAAACAAAGGACCCAAAAACTGTTACAAAGTAA

Protein sequence

MPIFHGISNQARSYRDSYIGMENQSSLDFRSYQLGELGAVSMTCKVIPLHFQLLMGPTSLKFIAKLKIDTAPAPQTKDPKTVTK*
Homology
[Close]
BLAST of CsGy1G027255 vs. NCBI nr
Match: KGN66225.1 (hypothetical protein Csa_007611 [Cucumis sativus])

HSP 1 Score: 170 bits (430), Expect = 3.75e-53
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MPIFHGISNQARSYRDSYIGMENQSSLDFRSYQLGELGAVSMTCKVIPLHFQLLMGPTSL 60
          MPIFHGISNQARSYRDSYIGMENQSSLDFRSYQLGELGAVSMTCKVIPLHFQLLMGPTSL
Sbjct: 1  MPIFHGISNQARSYRDSYIGMENQSSLDFRSYQLGELGAVSMTCKVIPLHFQLLMGPTSL 60

Query: 61 KFIAKLKIDTAPAPQTKDPKTVTK 84
          KFIAKLKIDTAPAPQTKDPKTVTK
Sbjct: 61 KFIAKLKIDTAPAPQTKDPKTVTK 84

[Close]
BLAST of CsGy1G027255 vs. ExPASy TrEMBL
Match: A0A0A0LWF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G586870 PE=4 SV=1)

HSP 1 Score: 170 bits (430), Expect = 1.82e-53
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 

Query: 1  MPIFHGISNQARSYRDSYIGMENQSSLDFRSYQLGELGAVSMTCKVIPLHFQLLMGPTSL 60
          MPIFHGISNQARSYRDSYIGMENQSSLDFRSYQLGELGAVSMTCKVIPLHFQLLMGPTSL
Sbjct: 1  MPIFHGISNQARSYRDSYIGMENQSSLDFRSYQLGELGAVSMTCKVIPLHFQLLMGPTSL 60

Query: 61 KFIAKLKIDTAPAPQTKDPKTVTK 84
          KFIAKLKIDTAPAPQTKDPKTVTK
Sbjct: 61 KFIAKLKIDTAPAPQTKDPKTVTK 84

The following BLAST results are available for this feature:
BLAST of CsGy1G027255 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G027255 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66225.13.75e-53100.00hypothetical protein Csa_007611 [Cucumis sativus][more]
BLAST of CsGy1G027255 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWF21.82e-53100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G586870 PE=4 SV=1[more]
BLAST of CsGy1G027255 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G027255.1CsGy1G027255.1mRNA