CsGy1G025500 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G025500
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 24424224 .. 24425860 (-)
RNA-Seq ExpressionCsGy1G025500
SyntenyCsGy1G025500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCGAGCAGCTCCTCCACCGGAAACGAAAACACCAAGAAGAGACCAGTCTCTTCAGAGGAAGAAGCTCAAGAGGTTGAAGCTGAAGGCTCAAAGAGAAGTTGTCCAAACTCATCTGATCATCTACCAACAGGGTGGGCTAATTAATTAGCTTTCTTTACTTCCTGTTTATATTGGTTGTCGTTATTATTAAGCTTTGAATTCTGCTATGAAATGTGGGTGTTTTTTCCCTTAATAATATTTAGTTTGTTTTTCCAGTTCTGGGTTTCTTACCCCTAGGTCTTTCAAAGCTACTTTGACGATAGAATTTGGACCTGAAAATCCCCAAGAGGAAGTAAAGTTCTATATTTTAATCTAGAATAACAGTAAGAGGATGTCAAGACCTACAATAACATGAGCTGTTTTGTTTTTCCTGGACGCAGACTATCCGCCTTGACTCTCTTCCACCATTACAAAGGTCAATATTTTATCTATACAGGTTGTGTTGTTCTTTGTGTGTTTCTCATTGTACAGTAGCATCATTTTCTCAACAATATTTTATTTTATTTTTTAGCTATGGACCTGAAATAAATCTACTTCAGAGTGTGGTTGGAATATTTGGAGATTCACTCAAAGGTATCGTTGTTAATAAAGAGCCAACATTGGGAAAAAAGCCTCTCCAACAAGTAAGAATACATTTTAGAGTCGGTTTATAAGGTTTTTCCAAGAAGTCATTTTTGTAGCTCTCTATCTGAATATGTAGCATAATTCGATGATATCTAGTGATTGTTGGTTGAATTCAACAAACATAAATATTTGAATAATATCATGACTGTCCATCTTGAAAAGTAGTATGTCGTTGATATCAATTTATGCACCTATTAGACTTTCATTTCAATGAAGACCTATACTCTACACTCAACCCATATCTAGCTAGAAGGGTAAAATAGAATTTTATTAAAATGGTAGGAACAAAATTAAATAGGAAACAAAGAAGAAAGAAAACTAAGACTTGAGATTTTTATGGAGAAAATCTTGTGTAATAATGCAAATCACAACTTTCGTTCAATTAATGATATACATGTGTAGATATATAGGTTATGTTTTCACAGTTTTGTGCTAAAAGTAAAATAAAAATACATCTCAATAATTCAAGTTGCTTTTTCAGGTTATCAAGGACCTAAATAAGAACCTAAATGAGCTTGTACAGAGTCTTCAATCTGTTCCACAAACAGTAAGGTCAGTTTTTTAATGACATGAAGTTCCTATGACATTTGTGTCTATGTCAAGTCATCATCCTATAAGAAAAATGTTTACTTACTACTCTGTGTTGATGATCTAGATCTGCTATTAGTAGGGAGTTATAAAGAAAGATTTAACTCATGTCAAAGATAACTTAAAGAGAGAATTTGATAATTTCGTGACGACTGAACAACTAGCTCATTCTGAAGTTCATAATTACCAAAACCAAAGCGTTGAGGTTAATGATCTATTTCTTTATTGTAGTTTGATGATATATATACAATTAAAAGATTCTACTTTATCTGTCAACTTTAGCTTTTGGGTCGGTTGATATAAATTATGACTCTTTCTATTCATATTATATGCCAAAAAACAGGACGATAATAATAACTTGGCGGGAACTCAACAGCTAG

mRNA sequence

ATGGATCCGAGCAGCTCCTCCACCGGAAACGAAAACACCAAGAAGAGACCAGTCTCTTCAGAGGAAGAAGCTCAAGAGGTTGAAGCTGAAGGCTCAAAGAGAAGTTGTCCAAACTCATCTGATCATCTACCAACAGGTTCTGGGTTTCTTACCCCTAGGTCTTTCAAAGCTACTTTGACGATAGAATTTGGACCTGAAAATCCCCAAGAGGAAACTATCCGCCTTGACTCTCTTCCACCATTACAAAGCTATGGACCTGAAATAAATCTACTTCAGAGTGTGGTTGGAATATTTGGAGATTCACTCAAAGGTATCGTTGTTAATAAAGAGCCAACATTGGGAAAAAAGCCTCTCCAACAAGTTATCAAGGACCTAAATAAGAACCTAAATGAGCTTGTACAGAGTCTTCAATCTGTTCCACAAACAGTAAGGACGATAATAATAACTTGGCGGGAACTCAACAGCTAG

Coding sequence (CDS)

ATGGATCCGAGCAGCTCCTCCACCGGAAACGAAAACACCAAGAAGAGACCAGTCTCTTCAGAGGAAGAAGCTCAAGAGGTTGAAGCTGAAGGCTCAAAGAGAAGTTGTCCAAACTCATCTGATCATCTACCAACAGGTTCTGGGTTTCTTACCCCTAGGTCTTTCAAAGCTACTTTGACGATAGAATTTGGACCTGAAAATCCCCAAGAGGAAACTATCCGCCTTGACTCTCTTCCACCATTACAAAGCTATGGACCTGAAATAAATCTACTTCAGAGTGTGGTTGGAATATTTGGAGATTCACTCAAAGGTATCGTTGTTAATAAAGAGCCAACATTGGGAAAAAAGCCTCTCCAACAAGTTATCAAGGACCTAAATAAGAACCTAAATGAGCTTGTACAGAGTCTTCAATCTGTTCCACAAACAGTAAGGACGATAATAATAACTTGGCGGGAACTCAACAGCTAG

Protein sequence

MDPSSSSTGNENTKKRPVSSEEEAQEVEAEGSKRSCPNSSDHLPTGSGFLTPRSFKATLTIEFGPENPQEETIRLDSLPPLQSYGPEINLLQSVVGIFGDSLKGIVVNKEPTLGKKPLQQVIKDLNKNLNELVQSLQSVPQTVRTIIITWRELNS*
Homology
[Close]
BLAST of CsGy1G025500 vs. NCBI nr
Match: XP_031739444.1 (uncharacterized protein LOC105436285 [Cucumis sativus] >XP_031739447.1 uncharacterized protein LOC105436285 [Cucumis sativus] >KAE8653361.1 hypothetical protein Csa_006970 [Cucumis sativus])

HSP 1 Score: 300 bits (769), Expect = 1.38e-102
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0 

Query: 1   MDPSSSSTGNENTKKRPVSSEEEAQEVEAEGSKRSCPNSSDHLPTGSGFLTPRSFKATLT 60
           MDPSSSSTGNENTKKRPVSSEEEAQEVEAEGSKRSCPNSSDHLPTGSGFLTPRSFKATLT
Sbjct: 1   MDPSSSSTGNENTKKRPVSSEEEAQEVEAEGSKRSCPNSSDHLPTGSGFLTPRSFKATLT 60

Query: 61  IEFGPENPQEETIRLDSLPPLQSYGPEINLLQSVVGIFGDSLKGIVVNKEPTLGKKPLQQ 120
           IEFGPENPQEETIRLDSLPPLQSYGPEINLLQSVVGIFGDSLKGIVVNKEPTLGKKPLQQ
Sbjct: 61  IEFGPENPQEETIRLDSLPPLQSYGPEINLLQSVVGIFGDSLKGIVVNKEPTLGKKPLQQ 120

Query: 121 VIKDLNKNLNELVQSLQSVPQTVRTIIITWRELNS 155
           VIKDLNKNLNELVQSLQSVPQTVRTIIITWRELNS
Sbjct: 121 VIKDLNKNLNELVQSLQSVPQTVRTIIITWRELNS 155

[Close]
BLAST of CsGy1G025500 vs. NCBI nr
Match: KGN66504.2 (hypothetical protein Csa_007037 [Cucumis sativus])

HSP 1 Score: 75.1 bits (183), Expect = 2.49e-12
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = 0 

Query: 1   MDPSSSSTGN-ENTKKRPVSSEEEAQEVEAEGSKRSCPNSSDHLPTGSGFLTPRSFKATL 60
           MDPS+SST N ENTKKR VSSEEEAQEV+  GSKR CP+SS  LPT  G LT R  +  +
Sbjct: 1   MDPSTSSTANNENTKKRSVSSEEEAQEVQ-NGSKRICPDSSP-LPTSFGVLTSRCSEV-I 60

Query: 61  TIEFGP--------ENPQEETIR-LDSLPPLQS-YGPEINLLQSVVGIFGDSLKGIVVNK 120
             E GP        E  +++T   L SLP   S YGP+   L+  +G+    +   +V +
Sbjct: 61  WKEHGPQILLQVLKEMEKKQTFAGLYSLPTSPSCYGPDSTPLELAIGVV---VNRFIVKE 120

Query: 121 EPTLGKKPLQQVIKDLNK 127
            PTL  +  QQV K+LN+
Sbjct: 121 GPTLEHESRQQVSKELNE 132

[Close]
BLAST of CsGy1G025500 vs. ExPASy TrEMBL
Match: A0A0A0LVZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569180 PE=4 SV=1)

HSP 1 Score: 276 bits (706), Expect = 8.60e-92
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 1   MDPSSSSTGNENTKKRPVSSEEEAQEVEAEGSKRSCPNSSDHLPTGSGFLTPRSFKATLT 60
           MDPSSSSTGNENTKKRPVSSEEEAQEVEAEGSKRSCPNSSDHLPTGSGFLTPRSFKATLT
Sbjct: 1   MDPSSSSTGNENTKKRPVSSEEEAQEVEAEGSKRSCPNSSDHLPTGSGFLTPRSFKATLT 60

Query: 61  IEFGPENPQEETIRLDSLPPLQSYGPEINLLQSVVGIFGDSLKGIVVNKEPTLGKKPLQQ 120
           IEFGPENPQEETIRLDSLPPLQSYGPEINLLQSVVGIFGDSLKGIVVNKEPTLGKKPLQQ
Sbjct: 61  IEFGPENPQEETIRLDSLPPLQSYGPEINLLQSVVGIFGDSLKGIVVNKEPTLGKKPLQQ 120

Query: 121 VIKDLNKNLNELVQSLQSVPQTV 143
           VIKDLNKNLNELVQSLQSVPQTV
Sbjct: 121 VIKDLNKNLNELVQSLQSVPQTV 143

[Close]
BLAST of CsGy1G025500 vs. ExPASy TrEMBL
Match: A0A0A0LWC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569160 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.88e-13
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = 0 

Query: 1   MDPSSSSTGN-ENTKKRPVSSEEEAQEVEAEGSKRSCPNSSDHLPTGSGFLTPRSFKATL 60
           MDPS+SST N ENTKKR VSSEEEAQEV+  GSKR CP+SS  LPT  G LT R  +  +
Sbjct: 1   MDPSTSSTANNENTKKRSVSSEEEAQEVQ-NGSKRICPDSSP-LPTSFGVLTSRCSEV-I 60

Query: 61  TIEFGP--------ENPQEETIR-LDSLPPLQS-YGPEINLLQSVVGIFGDSLKGIVVNK 120
             E GP        E  +++T   L SLP   S YGP+   L+  +G+    +   +V +
Sbjct: 61  WKEHGPQILLQVLKEMEKKQTFAGLYSLPTSPSCYGPDSTPLELAIGVV---VNRFIVKE 120

Query: 121 EPTLGKKPLQQVIKDLNK 127
            PTL  +  QQV K+LN+
Sbjct: 121 GPTLEHESRQQVSKELNE 132

The following BLAST results are available for this feature:
BLAST of CsGy1G025500 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G025500 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031739444.11.38e-102100.00uncharacterized protein LOC105436285 [Cucumis sativus] >XP_031739447.1 uncharact... [more]
KGN66504.22.49e-1246.38hypothetical protein Csa_007037 [Cucumis sativus][more]
BLAST of CsGy1G025500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVZ08.60e-92100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569180 PE=4 SV=1[more]
A0A0A0LWC43.88e-1346.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569160 PE=4 SV=1[more]
BLAST of CsGy1G025500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..51

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G025500.2CsGy1G025500.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0016310 phosphorylation
cellular_component GO:0110165 cellular anatomical entity
molecular_function GO:0004396 hexokinase activity