CsGy1G025065 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G025065
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Descriptionoligopeptide transporter 6-like
LocationGy14Chr1: 24052373 .. 24052795 (+)
RNA-Seq ExpressionCsGy1G025065
SyntenyCsGy1G025065
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCAGTTGAGACCAACTAGTTGCCGGAATAAGTTGAGTTCACCCCCAAAAAAACTGCAAGGTTTGGAATTCTTGGCTAACATTGATGGTCATGGGGAGTGTGTTCAGGCTAGGACGACAAAAGAGTAAGACAAAGGGGTTGCAGAAGGGCCTTGAACTCCGCGCTTACCTCTTTCTTCAAGCTTTGTTGGTTTGATTCCATCTCTTTTACTTGAGCTCGGCTCTTTTGGTCAACAATTTCATCTTACATCAAAAGTTCCCCTTGCTAGCTCCCGGTTTGCCACTGCTGGCGCTTGTTCTTCTAATGTTCGTGCCATGACACCCCTTAGTTATCGTTTCAATGTGTATGGAGCCAAAAGGTTTCCCATATATTTAAGCATCCTTTTCGTGGTGAATGGCCACAAGTACAATCAATTTTAA

mRNA sequence

ATGTTGCAGTTGAGACCAACTAGTTGCCGGAATAAGTTGAGTTCACCCCCAAAAAAACTGCAAGGTTTGGAATTCTTGGCTAACATTGATGGTCATGGGGAGTGTGTTCAGGCTAGGACGACAAAAGACTTTGTTGGTTTGATTCCATCTCTTTTACTTGAGCTCGGCTCTTTTGGTCAACAATTTCATCTTACATCAAAAGTTCCCCTTGCTAGCTCCCGGTTTGCCACTGCTGGCGCTTGTTCTTCTAATGTTCGTGCCATGACACCCCTTAGTTATCGTTTCAATGTGTATGGAGCCAAAAGGTTTCCCATATATTTAAGCATCCTTTTCGTGGTGAATGGCCACAAGTACAATCAATTTTAA

Coding sequence (CDS)

ATGTTGCAGTTGAGACCAACTAGTTGCCGGAATAAGTTGAGTTCACCCCCAAAAAAACTGCAAGGTTTGGAATTCTTGGCTAACATTGATGGTCATGGGGAGTGTGTTCAGGCTAGGACGACAAAAGACTTTGTTGGTTTGATTCCATCTCTTTTACTTGAGCTCGGCTCTTTTGGTCAACAATTTCATCTTACATCAAAAGTTCCCCTTGCTAGCTCCCGGTTTGCCACTGCTGGCGCTTGTTCTTCTAATGTTCGTGCCATGACACCCCTTAGTTATCGTTTCAATGTGTATGGAGCCAAAAGGTTTCCCATATATTTAAGCATCCTTTTCGTGGTGAATGGCCACAAGTACAATCAATTTTAA

Protein sequence

MLQLRPTSCRNKLSSPPKKLQGLEFLANIDGHGECVQARTTKDFVGLIPSLLLELGSFGQQFHLTSKVPLASSRFATAGACSSNVRAMTPLSYRFNVYGAKRFPIYLSILFVVNGHKYNQF*
Homology
[Close]
BLAST of CsGy1G025065 vs. ExPASy Swiss-Prot
Match: Q9FJD1 (Oligopeptide transporter 8 OS=Arabidopsis thaliana OX=3702 GN=OPT8 PE=2 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 6.8e-04
Identity = 29/72 (40.28%), Postives = 38/72 (52.78%), Query Frame = 0 

Query: 53  LELGSFGQQFHLTSKV---PLASSRFATAGACSSNVRAM---TPLSYRFNVYGAKRFPIY 112
           L +GSFG  +   +     PLAS  FA+A   +     M   TPL Y  ++Y AK FPIY
Sbjct: 257 LGIGSFGLDWSTIASYLGSPLASPFFASANIAAGFFLVMYVITPLCYYLDLYNAKTFPIY 316

Query: 113 LSILFVVNGHKY 119
              LFV +G +Y
Sbjct: 317 SGKLFVASGKEY 328

[Close]
BLAST of CsGy1G025065 vs. NCBI nr
Match: KGN66000.1 (hypothetical protein Csa_007484 [Cucumis sativus])

HSP 1 Score: 246 bits (629), Expect = 2.44e-82
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MLQLRPTSCRNKLSSPPKKLQGLEFLANIDGHGECVQARTTKDFVGLIPSLLLELGSFGQ 60
           MLQLRPTSCRNKLSSPPKKLQGLEFLANIDGHGECVQARTTKDFVGLIPSLLLELGSFGQ
Sbjct: 1   MLQLRPTSCRNKLSSPPKKLQGLEFLANIDGHGECVQARTTKDFVGLIPSLLLELGSFGQ 60

Query: 61  QFHLTSKVPLASSRFATAGACSSNVRAMTPLSYRFNVYGAKRFPIYLSILFVVNGHKYNQ 120
           QFHLTSKVPLASSRFATAGACSSNVRAMTPLSYRFNVYGAKRFPIYLSILFVVNGHKYNQ
Sbjct: 61  QFHLTSKVPLASSRFATAGACSSNVRAMTPLSYRFNVYGAKRFPIYLSILFVVNGHKYNQ 120

[Close]
BLAST of CsGy1G025065 vs. NCBI nr
Match: KGN62864.1 (hypothetical protein Csa_022373 [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 7.36e-10
Identity = 40/73 (54.79%), Postives = 44/73 (60.27%), Query Frame = 0 

Query: 53  LELGSFGQQFHLTSKV---PLASSRFATAGACSSNV---RAMTPLSYRFNVYGAKRFPIY 112
           L LG+FG  +   S     PLAS  FATA      V     MTPLSY  NVYGAKRFPIY
Sbjct: 262 LGLGAFGIDWSTISSYLGSPLASPWFATANVAVGFVIVMYVMTPLSYWLNVYGAKRFPIY 321

Query: 113 LSILFVVNGHKYN 119
            S LF+ NGH+YN
Sbjct: 322 SSSLFMANGHEYN 334

[Close]
BLAST of CsGy1G025065 vs. NCBI nr
Match: XP_008445079.1 (PREDICTED: oligopeptide transporter 6-like [Cucumis melo] >XP_008445080.1 PREDICTED: oligopeptide transporter 6-like [Cucumis melo])

HSP 1 Score: 66.6 bits (161), Expect = 7.36e-10
Identity = 40/73 (54.79%), Postives = 44/73 (60.27%), Query Frame = 0 

Query: 53  LELGSFGQQFHLTSKV---PLASSRFATAGACSSNV---RAMTPLSYRFNVYGAKRFPIY 112
           L LG+FG  +   S     PLAS  FATA      V     MTPLSY  NVYGAKRFPIY
Sbjct: 264 LGLGAFGIDWSTISSYLGSPLASPWFATANVAVGFVIVMYVMTPLSYWLNVYGAKRFPIY 323

Query: 113 LSILFVVNGHKYN 119
            S LF+ NGH+YN
Sbjct: 324 SSSLFMANGHEYN 336

[Close]
BLAST of CsGy1G025065 vs. NCBI nr
Match: XP_031736858.1 (LOW QUALITY PROTEIN: oligopeptide transporter 6 [Cucumis sativus])

HSP 1 Score: 66.6 bits (161), Expect = 7.39e-10
Identity = 40/73 (54.79%), Postives = 44/73 (60.27%), Query Frame = 0 

Query: 53  LELGSFGQQFHLTSKV---PLASSRFATAGACSSNV---RAMTPLSYRFNVYGAKRFPIY 112
           L LG+FG  +   S     PLAS  FATA      V     MTPLSY  NVYGAKRFPIY
Sbjct: 296 LGLGAFGIDWSTISSYLGSPLASPWFATANVAVGFVIVMYVMTPLSYWLNVYGAKRFPIY 355

Query: 113 LSILFVVNGHKYN 119
            S LF+ NGH+YN
Sbjct: 356 SSSLFMANGHEYN 368

[Close]
BLAST of CsGy1G025065 vs. NCBI nr
Match: KAA0065000.1 (oligopeptide transporter 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 66.2 bits (160), Expect = 1.00e-09
Identity = 40/73 (54.79%), Postives = 44/73 (60.27%), Query Frame = 0 

Query: 53  LELGSFGQQFHLTSKV---PLASSRFATAGACSSNVRAM---TPLSYRFNVYGAKRFPIY 112
           L LG+FG  +   S     PLAS  FATA      V  M   TPLSY  NVYGAKRFPIY
Sbjct: 264 LGLGAFGIDWSTISSYLGSPLASPWFATANVAVGFVIVMYIMTPLSYWLNVYGAKRFPIY 323

Query: 113 LSILFVVNGHKYN 119
            S LF+ NGH+YN
Sbjct: 324 SSSLFMANGHEYN 336

[Close]
BLAST of CsGy1G025065 vs. ExPASy TrEMBL
Match: A0A0A0LVW4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560820 PE=4 SV=1)

HSP 1 Score: 246 bits (629), Expect = 1.18e-82
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MLQLRPTSCRNKLSSPPKKLQGLEFLANIDGHGECVQARTTKDFVGLIPSLLLELGSFGQ 60
           MLQLRPTSCRNKLSSPPKKLQGLEFLANIDGHGECVQARTTKDFVGLIPSLLLELGSFGQ
Sbjct: 1   MLQLRPTSCRNKLSSPPKKLQGLEFLANIDGHGECVQARTTKDFVGLIPSLLLELGSFGQ 60

Query: 61  QFHLTSKVPLASSRFATAGACSSNVRAMTPLSYRFNVYGAKRFPIYLSILFVVNGHKYNQ 120
           QFHLTSKVPLASSRFATAGACSSNVRAMTPLSYRFNVYGAKRFPIYLSILFVVNGHKYNQ
Sbjct: 61  QFHLTSKVPLASSRFATAGACSSNVRAMTPLSYRFNVYGAKRFPIYLSILFVVNGHKYNQ 120

[Close]
BLAST of CsGy1G025065 vs. ExPASy TrEMBL
Match: A0A0A0LPB3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G377985 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.56e-10
Identity = 40/73 (54.79%), Postives = 44/73 (60.27%), Query Frame = 0 

Query: 53  LELGSFGQQFHLTSKV---PLASSRFATAGACSSNV---RAMTPLSYRFNVYGAKRFPIY 112
           L LG+FG  +   S     PLAS  FATA      V     MTPLSY  NVYGAKRFPIY
Sbjct: 262 LGLGAFGIDWSTISSYLGSPLASPWFATANVAVGFVIVMYVMTPLSYWLNVYGAKRFPIY 321

Query: 113 LSILFVVNGHKYN 119
            S LF+ NGH+YN
Sbjct: 322 SSSLFMANGHEYN 334

[Close]
BLAST of CsGy1G025065 vs. ExPASy TrEMBL
Match: A0A1S3BBT9 (oligopeptide transporter 6-like OS=Cucumis melo OX=3656 GN=LOC103488225 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.56e-10
Identity = 40/73 (54.79%), Postives = 44/73 (60.27%), Query Frame = 0 

Query: 53  LELGSFGQQFHLTSKV---PLASSRFATAGACSSNV---RAMTPLSYRFNVYGAKRFPIY 112
           L LG+FG  +   S     PLAS  FATA      V     MTPLSY  NVYGAKRFPIY
Sbjct: 264 LGLGAFGIDWSTISSYLGSPLASPWFATANVAVGFVIVMYVMTPLSYWLNVYGAKRFPIY 323

Query: 113 LSILFVVNGHKYN 119
            S LF+ NGH+YN
Sbjct: 324 SSSLFMANGHEYN 336

[Close]
BLAST of CsGy1G025065 vs. ExPASy TrEMBL
Match: A0A5A7VCT2 (Oligopeptide transporter 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003240 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.86e-10
Identity = 40/73 (54.79%), Postives = 44/73 (60.27%), Query Frame = 0 

Query: 53  LELGSFGQQFHLTSKV---PLASSRFATAGACSSNVRAM---TPLSYRFNVYGAKRFPIY 112
           L LG+FG  +   S     PLAS  FATA      V  M   TPLSY  NVYGAKRFPIY
Sbjct: 264 LGLGAFGIDWSTISSYLGSPLASPWFATANVAVGFVIVMYIMTPLSYWLNVYGAKRFPIY 323

Query: 113 LSILFVVNGHKYN 119
            S LF+ NGH+YN
Sbjct: 324 SSSLFMANGHEYN 336

[Close]
BLAST of CsGy1G025065 vs. ExPASy TrEMBL
Match: A0A6J1HU24 (oligopeptide transporter 6 OS=Cucurbita maxima OX=3661 GN=LOC111467469 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.11e-08
Identity = 37/73 (50.68%), Postives = 43/73 (58.90%), Query Frame = 0 

Query: 53  LELGSFGQQFHLTSKV---PLASSRFATAGACSSNVRAM---TPLSYRFNVYGAKRFPIY 112
           L LG+FG  +   S     PLAS  FATA      V  M   TPL+Y  NVYGAK+FPIY
Sbjct: 260 LGLGAFGIDWTTISSYLGSPLASPWFATANIAVGFVLVMYVMTPLTYWLNVYGAKKFPIY 319

Query: 113 LSILFVVNGHKYN 119
            S LF+ NG +YN
Sbjct: 320 SSALFMSNGQRYN 332

[Close]
BLAST of CsGy1G025065 vs. TAIR 10
Match: AT5G53520.1 (oligopeptide transporter 8 )

HSP 1 Score: 45.1 bits (105), Expect = 4.8e-05
Identity = 29/72 (40.28%), Postives = 38/72 (52.78%), Query Frame = 0 

Query: 53  LELGSFGQQFHLTSKV---PLASSRFATAGACSSNVRAM---TPLSYRFNVYGAKRFPIY 112
           L +GSFG  +   +     PLAS  FA+A   +     M   TPL Y  ++Y AK FPIY
Sbjct: 257 LGIGSFGLDWSTIASYLGSPLASPFFASANIAAGFFLVMYVITPLCYYLDLYNAKTFPIY 316

Query: 113 LSILFVVNGHKY 119
              LFV +G +Y
Sbjct: 317 SGKLFVASGKEY 328

[Close]
BLAST of CsGy1G025065 vs. TAIR 10
Match: AT4G27730.1 (oligopeptide transporter 1 )

HSP 1 Score: 43.5 bits (101), Expect = 1.4e-04
Identity = 29/73 (39.73%), Postives = 38/73 (52.05%), Query Frame = 0 

Query: 53  LELGSFGQQFHLTSKV---PLASSRFATAGACSSNVRAM---TPLSYRFNVYGAKRFPIY 112
           L +GS G  +   S     PLAS  FA+       V  M   TP+ Y  N+Y AK FPI+
Sbjct: 258 LGIGSIGFDWVTISAYLGSPLASPLFASVNVAIGFVLVMYIVTPVCYWLNIYDAKTFPIF 317

Query: 113 LSILFVVNGHKYN 120
            S LF+ NG +Y+
Sbjct: 318 SSQLFMGNGSRYD 330

[Close]
BLAST of CsGy1G025065 vs. TAIR 10
Match: AT4G10770.1 (oligopeptide transporter 7 )

HSP 1 Score: 40.8 bits (94), Expect = 9.1e-04
Identity = 29/73 (39.73%), Postives = 36/73 (49.32%), Query Frame = 0 

Query: 53  LELGSFGQQFHLTSKV---PLASSRFATAGACSSNV---RAMTPLSYRFNVYGAKRFPIY 112
           L +G+ G  +   S     PLAS  FATA      V     + P+ Y  +VY AK FPI+
Sbjct: 294 LGVGAIGLDWSTISSYLGSPLASPWFATANVGVGFVLVIYVLVPICYWLDVYKAKTFPIF 353

Query: 113 LSILFVVNGHKYN 120
            S LF   G KYN
Sbjct: 354 SSSLFSSQGSKYN 366

The following BLAST results are available for this feature:
BLAST of CsGy1G025065 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FJD16.8e-0440.28Oligopeptide transporter 8 OS=Arabidopsis thaliana OX=3702 GN=OPT8 PE=2 SV=1[more]
BLAST of CsGy1G025065 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66000.12.44e-82100.00hypothetical protein Csa_007484 [Cucumis sativus][more]
KGN62864.17.36e-1054.79hypothetical protein Csa_022373 [Cucumis sativus][more]
XP_008445079.17.36e-1054.79PREDICTED: oligopeptide transporter 6-like [Cucumis melo] >XP_008445080.1 PREDIC... [more]
XP_031736858.17.39e-1054.79LOW QUALITY PROTEIN: oligopeptide transporter 6 [Cucumis sativus][more]
KAA0065000.11.00e-0954.79oligopeptide transporter 6-like [Cucumis melo var. makuwa][more]
BLAST of CsGy1G025065 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVW41.18e-82100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G560820 PE=4 SV=1[more]
A0A0A0LPB33.56e-1054.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G377985 PE=3 SV=1[more]
A0A1S3BBT93.56e-1054.79oligopeptide transporter 6-like OS=Cucumis melo OX=3656 GN=LOC103488225 PE=3 SV=... [more]
A0A5A7VCT24.86e-1054.79Oligopeptide transporter 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A6J1HU245.11e-0850.68oligopeptide transporter 6 OS=Cucurbita maxima OX=3661 GN=LOC111467469 PE=3 SV=1[more]
BLAST of CsGy1G025065 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G53520.14.8e-0540.28oligopeptide transporter 8 [more]
AT4G27730.11.4e-0439.73oligopeptide transporter 1 [more]
AT4G10770.19.1e-0439.73oligopeptide transporter 7 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G025065.1CsGy1G025065.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane