CsGy1G023920 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G023920
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	28S ribosomal protein S29, mitochondrial
Location	Gy14Chr1: 22626289 .. 22631225 (-)
RNA-Seq Expression	CsGy1G023920
Synteny	CsGy1G023920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATACCCATTTGTTAGGAGGTCACCCGCGTTCTGCAGAATACCGTCTTCGTTCCCATCTCCCACCGGCCGAAAATGATGCGGTCAATTCTCAGAGCAACAGCTGCAGCCTCCAAACACCACTTCTCCAATCGAAACCCTTCTCCCATCCTATCTCTTACTTCAAATTACTCAGCTAAGACCACCAAATCCCCCGTCAAGAAAGGAAAGAAGGGCAAGTCCGAGGCCGATGCCAAAGCCGGCGATGACCCCTCCGCCCCTGCTGCTGCTTCCAACGACTTAGATGCGGCTCTTTCTGATGATAAAATCCGCGCCCGCCGTCTTGCTGCCGAGGAAAATGATACCTCACTCGATGTTGGCCCGAATGGCCGCCCACTCTTTACCTCAGCCTCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGAACTTATTTCAAATTAAAGTACGTATGTTTTCTACATTGTTTATGAGTGCATGTTTATTGGGATTTTTATTCATTTCTTTGCGAAATGGAAGTATGGAAGGACTTAATGAGGTACTGCCGGAGGGTTTGCCTATGGGGATGGTCAAGGAGTTTGAGGAGTCTATACGAAGTGCTGTACTTGTGCGGCAGAGTTTCTTGGATCTCCGTGACAATTTCAGGCGGGTGGTTGATCCTTCATTACTGTCTCCGGCTGGTATTACTTTGCTTCTACTCTCATGTCTTCAAATGGTTCTCGTGTTATTTAGTTATATCGAAGATACTGGTAATTTAGGGTGGAGACTGGACTCTTGAACGTCTGAATCTTTGGTCGAACAAATATATTTAGCTGTTCCTATTCAAATGTCCAGGTTCAAAAATTAGAAAACAGATCGTCTTGGATGGTCCAGTTAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCAATGGGCTCGCGAAGAAGGGTGGTTAGTTTTATATGTTCCTAGTGGACGTCGGTGGACACATGGAGGGTTCTTCTTTAAAAACCCTCAAACAGGACTTTGGGACACACCCGTTCAGGCTGAAGATGTTCTGAGAGTGAGGACTTTTTCCTGCTACTTAAGAATTAGATTGAAGTACTGGCGTGTTTTTTTTTTTCAGGATCTTCTAGTGCATTTGTCATGATTATGCAGGTCCAAATTTCAATAGTTTTCTTACTGAAGTCTTTGGGATCGCTACCTCATGTTCTATTTTTCCGTGTTTTCTAACTCTCAAACCTTGCATTTCCATCGGATTTAGACATGTAGTTTAATGCTGTATTTCCTAATTTCATTGATGGATGTTAATTCTTACTAAAGGTTGTTGAGAATCTTGACAAGGGAAATGATCTCTCATGATCATGATTATTCATGGTAGCTGACTGGGAAATGTTTTGCCAAGTGTTCACCGTTTTGTGATGAGCTTTCAGGAGATGATGTGAGGACTTGGGATAAATATATAATACTGAACAGTTGACTTATATACTTTTCTTTCGCGGGCTGGTTTGAACCAGGATTTTGTGAAGTACAATGAGACCCAGTTAAGACAATTGCCATGCCAAATATCTGAACCTATACCGTTGGGAGAGGGCGCTGGTGTTGGGATGGCTAAAGGTGCTGATTCCATGAGGATGCCTGAAGGTTCTACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGTAGCTGTTGGGGTGGTGGTTCGTTTAAGAAAAGAACTATCGCTTGTGAAAGATATTCCTGTGCTCATTGCTATTGATCAAGTGAGACACAAAACTACATCTACCCTTTATTTGATTTCTAAAATTAAGTTTCTTGGACGAATTAAATCTTCCAAAACTAATTTAGTTGCAATAATGATTGTTACTTCTTGTCCAGTATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCCGTGACTGTTCGTTCAACTCGACCAATACATGCTAGAGAACTTGCAATGGTTAGTACTACTTCTTTAGATTGAAAATATTGTGTTCTAGTTAATTCTGTTTATTACAATTCATTGGGCGTTCCTAGGATATCATATCGGTTTTTGTGTCTCGTGCATTTTAGCTAGCCCCTCTACTTCCATCGTTTTTGTAGTCCCTTTGCCTTGAAATTTCAATTTTTGCTTTGAAACTCCTGTCCTTCACTTCTTTACTTATTTTTCTGGTTAGATGTTAGAGACTAAAACACGACAGATAGGGCGATATGATTCAAAAAAGGAAAGTAAAGTTGAAAGAATTATGGAATGAACGATGTTTTTGTGTACACAAGTGAAGAAATATAATAGTTATAGCTTTTTGTGGGAGTCTTTCTGAGTTACTTATAATTTTGCTGCGTGTTTCAAGTTACAACTATGTTTTCTCTTAATCTTTTTTTATTTGATTTTTCCTATCTTTTTCTTTTCCTATTTCCCATTTAGATTAGCTTTGGAAATGCATGGTTCAATTTTATATGAATTTTCTTAGGTTTTGGATTATCCCATAAAAAAGAAAAAAAAAAAAAAGAGGACAAAGAACGGGTTTAAGGCAATGGGGCTCATCAATAGAGTATCAGAATTAGGGAGTACAAATAGATCATCAGGAGAAAGAGAATTGGATGGCTCATTCAATAATATTCTGTCAATGGCACAACTTGACCAGTGAGTTAAAAATGGAAAACCCAAGTTCAACAATAGTTCAGATGTTTGGTTGTAAGTGGTTGGAGGATGTAAAAGTTAGGTTCAAGTACACGTTTGGCTCAAATTTAGTTGTGTGCAGTAGGTTCTTGAAACTTAAAAATTTATAGTTTTTAAATTTTTTATATAGTGTCGGGACTGAAGAAGAATTGAATCATATTCTTTGAAGTTGTGCTTTTGCAACGTGTACTTGGAGTTTATTTATTTCTTCGTGTTTGGTCCATTTAGCCATTGAGATTCAGGGAGATGGTTAAAGAGTTCCTTCCCACCCTACCCTTCTGCGAGAGGGAGAGGTTCCTAATTCCTATGGCAAGTTGGGGTTGGTGCGGAATTTCAGGAGGAGAGGAACAACATATCCTTTAGAGAAGCTGAGAGGGGGTTCTTGTGACATTTGGTTCCTTTGTCAGGTTTCATGTATCTCTTTAGGTGTTGTTGATGAAGTCTTTTTGTAATTGTTTTCTAAGTCTTATTCTTCTTGACTAGAGTAATTTATCTCTTAAAAGAGTTCTCTTTTCTAGCCTTGGTGTTTTTGGATGTCATTGTATTCTTTCAGGGTTGACCCATTTTAATTATTATTATTATTTTATTACTATTACTTTTTTACTTTAATAATGTGTTTGAACTCTGAAAACCAACTGATTAATCTTTGGATTCTCAAGTTCCGTGTGTCTAAATAGGTTTCTAATCTATGAGACGCTATTTAAAGTTCAAAGACTTGTTAGACTCAAAATTAATAACTTAAAGACATTAAAAGCTCTTATCGTTTGGAAATGTGTGATATTTTTAAAGTAAAGGTGCCTTGTACCCATTAAACTCGGCTTTAGAAGTTTCAAACAAAAGATTTTTTTTTTTTCTAATCAATGATGAGAATTTCTAATTTTTGGCAGGTAAAAGCTTTTAGGTCTATGATGCATGACGATATGATGGTTGGTGCTTTCTCCCATTCAACTGCTGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTCTAGGTGCACGTGTTAATTTCCCTCGCTACAGTCTTGATGAAGCGGCTTCTGTTTTCCACTACTACCTCAGGTATGCTTATGTGGTTCTTATTTTGAAAGCAAACTAATTTCACTGAAATAAATTAAGAATTTAATTTTAACTGAAAAAATAAAGGTTACAAAAGATTTGTTTGATCAAGGATTTAGAATAAGCCCCCTATTTTGCTATTAGAGTAGATCAGAGTTTTTAAAAAGATGGTACGCCAACTCCCGTCTTTTGACCTATATTCTAAAAGCTTTCTTATTTCGACGTTCTCAAGTCTTATTGATACTGGATGAACTAGAAAGCTCGTTAATAACAACCAACCTAGGAGAATCGTGTAGGTACAGATTTCTATTAAGAAAAACAACTGTCTTGGAAAACTATCAAAAGTTCCATCAACCCTTGGAAGTTTCGTTGCTGCAGATTAGAGTTTCCTTGGCCAAAACAATAGGTTGTTGCATAATTTTCAGTTGACAAGGTAGGGACACTGCTAACTGCTAAGATTGAGGATCCCTTTTGTAATTGTTTACTGTATACATTAATGACCGTCGTCAAAACCTTAATTGGTGGGAAGGTTGATGAAGTCTAATTGCTTACTGAGTCTTTTCTATGGGTAAGCATTCAGTACATTTGAGGGGATTAATAGTAATGAACAAGATGCGTATTATCTGTAAGATGAATGACGCCTATCTCTTTTTAGTCTAAAATCATTTGCATATATTCGTCTGCTTAGTCGCATACTTACTTGGGCATGATTTTCATTAGCTCACAGCCTGGTTTCTTTGCAAATGTTGCATTGTAGGGTATTGTTTGCTTTAGTTAGTTGTTTGTTTTCTTGACAGACAAAGACTGATACGTCGTGAAGCCTTCTCTGAGGATGGCTGGAAAAAGATATACTATTTGTCGAATGGAAATGGAGCGGAAATGCGGTGGTTGGCACCATTGATGCGTTGACAACAAAGAGGCCGATTTCCTTCCTGCCTGCTCGACTGTGGACTCGGTACCATTGCTTAGTTCTCATGCAGATTCGTTACCTCAGAATCAGATTCCCCTAACCTTCTCACTCAATATTCTACATATCATTGGTTTGCTGCCCTCTAATACGGAGTCCACTGTTTGTATATGTAAGCTAAGGGCCACATCAGAGAAGTAACCTTTGGTAGGGCACAATGTTTAGTCTACATGCCTACACTTCGCTCTTCTTGTTTTTTTTTTTTTTTGTTTTTTTTTTGTTTTTTTTTGTTTTTTTT

mRNA sequence

CTTATACCCATTTGTTAGGAGGTCACCCGCGTTCTGCAGAATACCGTCTTCGTTCCCATCTCCCACCGGCCGAAAATGATGCGGTCAATTCTCAGAGCAACAGCTGCAGCCTCCAAACACCACTTCTCCAATCGAAACCCTTCTCCCATCCTATCTCTTACTTCAAATTACTCAGCTAAGACCACCAAATCCCCCGTCAAGAAAGGAAAGAAGGGCAAGTCCGAGGCCGATGCCAAAGCCGGCGATGACCCCTCCGCCCCTGCTGCTGCTTCCAACGACTTAGATGCGGCTCTTTCTGATGATAAAATCCGCGCCCGCCGTCTTGCTGCCGAGGAAAATGATACCTCACTCGATGTTGGCCCGAATGGCCGCCCACTCTTTACCTCAGCCTCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGAACTTATTTCAAATTAAATATGGAAGGACTTAATGAGGTACTGCCGGAGGGTTTGCCTATGGGGATGGTCAAGGAGTTTGAGGAGTCTATACGAAGTGCTGTACTTGTGCGGCAGAGTTTCTTGGATCTCCGTGACAATTTCAGGCGGGTGGTTGATCCTTCATTACTGTCTCCGGCTGGTTCAAAAATTAGAAAACAGATCGTCTTGGATGGTCCAGTTAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCAATGGGCTCGCGAAGAAGGGTGGTTAGTTTTATATGTTCCTAGTGGACGTCGGTGGACACATGGAGGGTTCTTCTTTAAAAACCCTCAAACAGGACTTTGGGACACACCCGTTCAGGCTGAAGATGTTCTGAGAGATTTTGTGAAGTACAATGAGACCCAGTTAAGACAATTGCCATGCCAAATATCTGAACCTATACCGTTGGGAGAGGGCGCTGGTGTTGGGATGGCTAAAGGTGCTGATTCCATGAGGATGCCTGAAGGTTCTACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGTAGCTGTTGGGGTGGTGGTTCGTTTAAGAAAAGAACTATCGCTTGTGAAAGATATTCCTGTGCTCATTGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCCGTGACTGTTCGTTCAACTCGACCAATACATGCTAGAGAACTTGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGACGATATGATGGTTGGTGCTTTCTCCCATTCAACTGCTGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTCTAGGTGCACGTGTTAATTTCCCTCGCTACAGTCTTGATGAAGCGGCTTCTGTTTTCCACTACTACCTCAGACAAAGACTGATACGTCGTGAAGCCTTCTCTGAGGATGGCTGGAAAAAGATATACTATTTGTCGAATGGAAATGGAGCGGAAATGCGGTGGTTGGCACCATTGATGCGTTGACAACAAAGAGGCCGATTTCCTTCCTGCCTGCTCGACTGTGGACTCGGTACCATTGCTTAGTTCTCATGCAGATTCGTTACCTCAGAATCAGATTCCCCTAACCTTCTCACTCAATATTCTACATATCATTGGTTTGCTGCCCTCTAATACGGAGTCCACTGTTTGTATATGTAAGCTAAGGGCCACATCAGAGAAGTAACCTTTGGTAGGGCACAATGTTTAGTCTACATGCCTACACTTCGCTCTTCTTGTTTTTTTTTTTTTTTGTTTTTTTTTTGTTTTTTTTTGTTTTTTTT

Coding sequence (CDS)

ATGATGCGGTCAATTCTCAGAGCAACAGCTGCAGCCTCCAAACACCACTTCTCCAATCGAAACCCTTCTCCCATCCTATCTCTTACTTCAAATTACTCAGCTAAGACCACCAAATCCCCCGTCAAGAAAGGAAAGAAGGGCAAGTCCGAGGCCGATGCCAAAGCCGGCGATGACCCCTCCGCCCCTGCTGCTGCTTCCAACGACTTAGATGCGGCTCTTTCTGATGATAAAATCCGCGCCCGCCGTCTTGCTGCCGAGGAAAATGATACCTCACTCGATGTTGGCCCGAATGGCCGCCCACTCTTTACCTCAGCCTCTTCACTCTCACAGCTCACTCGCAAGGATGCAGGAACTTATTTCAAATTAAATATGGAAGGACTTAATGAGGTACTGCCGGAGGGTTTGCCTATGGGGATGGTCAAGGAGTTTGAGGAGTCTATACGAAGTGCTGTACTTGTGCGGCAGAGTTTCTTGGATCTCCGTGACAATTTCAGGCGGGTGGTTGATCCTTCATTACTGTCTCCGGCTGGTTCAAAAATTAGAAAACAGATCGTCTTGGATGGTCCAGTTAATTGTGGAAAGAGTATTGCGCTCGCCATGCTCGTTCAATGGGCTCGCGAAGAAGGGTGGTTAGTTTTATATGTTCCTAGTGGACGTCGGTGGACACATGGAGGGTTCTTCTTTAAAAACCCTCAAACAGGACTTTGGGACACACCCGTTCAGGCTGAAGATGTTCTGAGAGATTTTGTGAAGTACAATGAGACCCAGTTAAGACAATTGCCATGCCAAATATCTGAACCTATACCGTTGGGAGAGGGCGCTGGTGTTGGGATGGCTAAAGGTGCTGATTCCATGAGGATGCCTGAAGGTTCTACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGTAGCTGTTGGGGTGGTGGTTCGTTTAAGAAAAGAACTATCGCTTGTGAAAGATATTCCTGTGCTCATTGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAGTATGAAGAACCCGTGACTGTTCGTTCAACTCGACCAATACATGCTAGAGAACTTGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGACGATATGATGGTTGGTGCTTTCTCCCATTCAACTGCTGTAGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCTCTAGGTGCACGTGTTAATTTCCCTCGCTACAGTCTTGATGAAGCGGCTTCTGTTTTCCACTACTACCTCAGACAAAGACTGATACGTCGTGAAGCCTTCTCTGAGGATGGCTGGAAAAAGATATACTATTTGTCGAATGGAAATGGAGCGGAAATGCGGTGGTTGGCACCATTGATGCGTTGA

Protein sequence

MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPSAPAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYFKLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKIRKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTGIKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR*

Homology

[Close]

BLAST of CsGy1G023920 vs. NCBI nr
Match: XP_004145300.3 (28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KAE8653293.1 hypothetical protein Csa_023268 [Cucumis sativus])

HSP 1 Score: 896 bits (2316), Expect = 0.0
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of CsGy1G023920 vs. NCBI nr
Match: XP_011657272.1 (28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KGN47392.1 hypothetical protein Csa_023053 [Cucumis sativus])

HSP 1 Score: 867 bits (2239), Expect = 0.0
Identity = 440/455 (96.70%), Postives = 446/455 (98.02%), Query Frame = 0


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           M+RSILRAT+AASKHH  NRNP+PILSLTSNYSAKTTK PVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A AAAS+DLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K NMEGLNEVLPEGLP+GMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKN QTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDF+KYNE QLRQLPCQI EPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSED WKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of CsGy1G023920 vs. NCBI nr
Match: XP_008457304.1 (PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo] >KAA0059987.1 28S ribosomal protein S29 [Cucumis melo var. makuwa] >TYJ97246.1 28S ribosomal protein S29 [Cucumis melo var. makuwa])

HSP 1 Score: 861 bits (2225), Expect = 1.69e-314
Identity = 437/455 (96.04%), Postives = 443/455 (97.36%), Query Frame = 0


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           M+RSILRATAAASKHHF NRNPSPILS TSNYSAKTTK PVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MLRSILRATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A AA+ N LDAALSDDK RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAASDN-LDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K NMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLV WAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDF+KYNE +LRQLPCQISEPIPLGEG GVGMAKGADSMRMP+GSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTH AVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSE+GWKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454

[Close]

BLAST of CsGy1G023920 vs. NCBI nr
Match: XP_038895729.1 (28S ribosomal protein S29, mitochondrial [Benincasa hispida])

HSP 1 Score: 828 bits (2138), Expect = 3.30e-301
Identity = 419/455 (92.09%), Postives = 433/455 (95.16%), Query Frame = 0


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           M+RSIL+ATAAASK H  NRNP PILSLTSNYSAK TKS +KK KKGKS+AD KAGDD S
Sbjct: 1   MLRSILKATAAASKSHLCNRNPFPILSLTSNYSAKVTKSSIKKAKKGKSKADGKAGDDLS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A AAA++DLDAALSDDK RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAAATDDLDAALSDDKSRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K NMEGLNEVLPEGLP+GMVKEFEES+RSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLV WAR+EGWLVLYVPSGRRWTHGGFFF+NPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFRNPQTGLWDTPV 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVL+DF+KYNET LRQLPCQISEPI LGEG GVGM KGADSM MP+GSTLYDLIDTG
Sbjct: 241 QAEDVLKDFLKYNETCLRQLPCQISEPILLGEGVGVGMMKGADSMTMPDGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTH AVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MV AFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGAR+NFPRYSLDEAASV HYYLRQ
Sbjct: 361 MVNAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARLNFPRYSLDEAASVVHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSEDGWKKIYYLSNGNGAEMRWL PLMR
Sbjct: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLVPLMR 455

[Close]

BLAST of CsGy1G023920 vs. NCBI nr
Match: XP_022154896.1 (28S ribosomal protein S29, mitochondrial [Momordica charantia])

HSP 1 Score: 823 bits (2126), Expect = 2.22e-299
Identity = 415/455 (91.21%), Postives = 430/455 (94.51%), Query Frame = 0


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           M+RS+LRA AAASKHH  NRNPSPILSL+SNYSAKT KS VKK KKGKS ADAKA DDPS
Sbjct: 1   MLRSVLRAAAAASKHHLCNRNPSPILSLSSNYSAKTPKSTVKKTKKGKSNADAKAADDPS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A AAAS+DLDAALSDDK RARRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKD+GTYF
Sbjct: 61  ATAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQLTRKDSGTYF 120

Query: 121 KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K NMEGLNEVLPEGLP+GMVKEFEES+RSAVLVR+SFL+LRDNFRRVVDPSL SP G KI
Sbjct: 121 KFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRKSFLELRDNFRRVVDPSLRSPDGLKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKS ALAMLV WAR+EGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTP+
Sbjct: 181 RKQIVLDGPVNCGKSTALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPI 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDF+KYNET+LRQLPCQISEPIPLGEG GVGM KGADSM MPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTH AVGVV+RLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR IHARELA
Sbjct: 301 IKHTHAAVGVVIRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRTIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAF+ED WKKIYYLSNGNGAEMRWL PLMR
Sbjct: 421 RLIRREAFTEDAWKKIYYLSNGNGAEMRWLVPLMR 455

[Close]

BLAST of CsGy1G023920 vs. ExPASy TrEMBL
Match: A0A0A0LVC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533720 PE=3 SV=1)

HSP 1 Score: 895 bits (2312), Expect = 0.0
Identity = 454/455 (99.78%), Postives = 455/455 (100.00%), Query Frame = 0


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           KLNMEGLNEVLPEGLP+GMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KLNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of CsGy1G023920 vs. ExPASy TrEMBL
Match: A0A0A0KG66 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G310480 PE=3 SV=1)

HSP 1 Score: 867 bits (2239), Expect = 0.0
Identity = 440/455 (96.70%), Postives = 446/455 (98.02%), Query Frame = 0


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           M+RSILRAT+AASKHH  NRNP+PILSLTSNYSAKTTK PVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MLRSILRATSAASKHHICNRNPAPILSLTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A AAAS+DLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAAASDDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K NMEGLNEVLPEGLP+GMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KYNMEGLNEVLPEGLPVGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKN QTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNHQTGLWDTPV 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDF+KYNE QLRQLPCQI EPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIQLRQLPCQIYEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSED WKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEDAWKKIYYLSNGNGAEMRWLAPLMR 455

[Close]

BLAST of CsGy1G023920 vs. ExPASy TrEMBL
Match: A0A5A7UZA8 (28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00370 PE=3 SV=1)

HSP 1 Score: 861 bits (2225), Expect = 8.19e-315
Identity = 437/455 (96.04%), Postives = 443/455 (97.36%), Query Frame = 0


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           M+RSILRATAAASKHHF NRNPSPILS TSNYSAKTTK PVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MLRSILRATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A AA+ N LDAALSDDK RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAASDN-LDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K NMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLV WAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDF+KYNE +LRQLPCQISEPIPLGEG GVGMAKGADSMRMP+GSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTH AVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSE+GWKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454

[Close]

BLAST of CsGy1G023920 vs. ExPASy TrEMBL
Match: A0A1S3C6G8 (28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026 PE=3 SV=1)

HSP 1 Score: 861 bits (2225), Expect = 8.19e-315
Identity = 437/455 (96.04%), Postives = 443/455 (97.36%), Query Frame = 0


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           M+RSILRATAAASKHHF NRNPSPILS TSNYSAKTTK PVKKGKKGKSEADAKAGDDPS
Sbjct: 1   MLRSILRATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKKGKKGKSEADAKAGDDPS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A AA+ N LDAALSDDK RARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF
Sbjct: 61  ASAASDN-LDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120

Query: 121 KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K NMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI
Sbjct: 121 KFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKSIALAMLV WAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV
Sbjct: 181 RKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDF+KYNE +LRQLPCQISEPIPLGEG GVGMAKGADSMRMP+GSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTH AVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA
Sbjct: 301 IKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAFSE+GWKKIYYLSNGNGAEMRWLAPLMR
Sbjct: 421 RLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454

[Close]

BLAST of CsGy1G023920 vs. ExPASy TrEMBL
Match: A0A6J1DQ31 (28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111022041 PE=3 SV=1)

HSP 1 Score: 823 bits (2126), Expect = 1.08e-299
Identity = 415/455 (91.21%), Postives = 430/455 (94.51%), Query Frame = 0


Query: 1   MMRSILRATAAASKHHFSNRNPSPILSLTSNYSAKTTKSPVKKGKKGKSEADAKAGDDPS 60
           M+RS+LRA AAASKHH  NRNPSPILSL+SNYSAKT KS VKK KKGKS ADAKA DDPS
Sbjct: 1   MLRSVLRAAAAASKHHLCNRNPSPILSLSSNYSAKTPKSTVKKTKKGKSNADAKAADDPS 60

Query: 61  APAAASNDLDAALSDDKIRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDAGTYF 120
           A AAAS+DLDAALSDDK RARRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKD+GTYF
Sbjct: 61  ATAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQLTRKDSGTYF 120

Query: 121 KLNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPAGSKI 180
           K NMEGLNEVLPEGLP+GMVKEFEES+RSAVLVR+SFL+LRDNFRRVVDPSL SP G KI
Sbjct: 121 KFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRKSFLELRDNFRRVVDPSLRSPDGLKI 180

Query: 181 RKQIVLDGPVNCGKSIALAMLVQWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPV 240
           RKQIVLDGPVNCGKS ALAMLV WAR+EGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTP+
Sbjct: 181 RKQIVLDGPVNCGKSTALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPI 240

Query: 241 QAEDVLRDFVKYNETQLRQLPCQISEPIPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTG 300
           QAEDVLRDF+KYNET+LRQLPCQISEPIPLGEG GVGM KGADSM MPEGSTLYDLIDTG
Sbjct: 241 QAEDVLRDFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDLIDTG 300

Query: 301 IKHTHVAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHARELA 360
           IKHTH AVGVV+RLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTR IHARELA
Sbjct: 301 IKHTHAAVGVVIRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRTIHARELA 360

Query: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQ 420
           MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRYSLDEAASVFHYYLRQ
Sbjct: 361 MVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHYYLRQ 420

Query: 421 RLIRREAFSEDGWKKIYYLSNGNGAEMRWLAPLMR 455
           RLIRREAF+ED WKKIYYLSNGNGAEMRWL PLMR
Sbjct: 421 RLIRREAFTEDAWKKIYYLSNGNGAEMRWLVPLMR 455

[Close]

BLAST of CsGy1G023920 vs. TAIR 10
Match: AT1G16870.1 (mitochondrial 28S ribosomal protein S29-related )

HSP 1 Score: 578.6 bits (1490), Expect = 4.5e-165
Identity = 289/428 (67.52%), Postives = 338/428 (78.97%), Query Frame = 0


Query: 33  SAKTTKSPVKKGKKGKSEADAKAGDDPSAPAAASNDLDAALSDD--KIRARRLAAEENDT 92
           S+K+TKS + K KK + +     G DP A  A   +  AA  DD    RA+RLA +E   
Sbjct: 53  SSKSTKSSITKTKKSEGKKSKPKGGDPGAAGAEEGEFGAAGGDDLEAGRAKRLADDEKIP 112

Query: 93  SLDVGPNGRPLFT-SASSLSQLTRKDAGTYFKLNMEGLNEVLPEGLPMGMVKEFEESIRS 152
           SLDVGPNGRPLFT   ++LSQLT KD G+YFK +   L  VLPEGL  G+  EF ES R 
Sbjct: 113 SLDVGPNGRPLFTPKDTTLSQLTHKDIGSYFKFDEAALKAVLPEGLASGIEDEFNESWRP 172

Query: 153 AVLVRQSFLDLRDNFRRVVDPSL--LSPAGSKIRKQIVLDGPVNCGKSIALAMLVQWARE 212
           A+LVR+S+L LRDNFRR+ DP +      G K++KQIVLDGPV CGKSIALAMLV WAR+
Sbjct: 173 ALLVRKSYLALRDNFRRIADPPMWPSDSKGVKLQKQIVLDGPVKCGKSIALAMLVHWARD 232

Query: 213 EGWLVLYVPSGRRWTHGGFFFKNPQTGLWDTPVQAEDVLRDFVKYNETQLRQLPCQISEP 272
           EGWLVLY P GR WTHGG+F+KNP TG WDTP+QAE++L+DFVK+NE++LR+L C+I +P
Sbjct: 233 EGWLVLYAPKGRDWTHGGYFYKNPHTGFWDTPLQAENILKDFVKFNESRLRELRCKIHDP 292

Query: 273 IPLGEGAGVGMAKGADSMRMPEGSTLYDLIDTGIKHTHVAVGVVVRLRKELSLVKDIPVL 332
           I LGEGAGVG  KGAD+M +PE STLYDL+  GIK TH AV VVVRLRKELS+VKD+PVL
Sbjct: 293 IVLGEGAGVGYLKGADAMPIPEDSTLYDLVQMGIKSTHAAVNVVVRLRKELSVVKDVPVL 352

Query: 333 IAIDQYNNWFTFSEYEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKL 392
           I IDQYN+WFTFSE+EEPVT RS RPIHAREL  V AFRSMMH+DMMVGAFSHSTAVGKL
Sbjct: 353 IVIDQYNSWFTFSEFEEPVTPRSCRPIHARELTTVNAFRSMMHEDMMVGAFSHSTAVGKL 412

Query: 393 RQDLPDVPLGARVNFPRYSLDEAASVFHYYLRQRLIRREAFSEDGWKKIYYLSNGNGAEM 452
           R+DLPDVP+ AR  FPRYSLDEA +V +YYLRQRL+RRE F+E+ WKKIYYL+NGNGAEM
Sbjct: 413 RKDLPDVPVDARQQFPRYSLDEAEAVCYYYLRQRLVRREVFNEENWKKIYYLANGNGAEM 472

Query: 453 RWLAPLMR 456
           RWLAP MR
Sbjct: 473 RWLAPFMR 480

The following BLAST results are available for this feature:

BLAST of CsGy1G023920 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy1G023920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145300.3	0.0	100.00	28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KAE8653293.1 hypothe...	[more]
XP_011657272.1	0.0	96.70	28S ribosomal protein S29, mitochondrial [Cucumis sativus] >KGN47392.1 hypotheti...	[more]
XP_008457304.1	1.69e-314	96.04	PREDICTED: 28S ribosomal protein S29, mitochondrial [Cucumis melo] >KAA0059987.1...	[more]
XP_038895729.1	3.30e-301	92.09	28S ribosomal protein S29, mitochondrial [Benincasa hispida]	[more]
XP_022154896.1	2.22e-299	91.21	28S ribosomal protein S29, mitochondrial [Momordica charantia]	[more]

BLAST of CsGy1G023920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVC2	0.0	99.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533720 PE=3 SV=1	[more]
A0A0A0KG66	0.0	96.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G310480 PE=3 SV=1	[more]
A0A5A7UZA8	8.19e-315	96.04	28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C6G8	8.19e-315	96.04	28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026...	[more]
A0A6J1DQ31	1.08e-299	91.21	28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of CsGy1G023920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16870.1	4.5e-165	67.52	mitochondrial 28S ribosomal protein S29-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019368	Ribosomal protein S23/S29, mitochondrial	PFAM	PF10236	DAP3	coord: 177..377 e-value: 9.6E-30 score: 103.8
IPR019368	Ribosomal protein S23/S29, mitochondrial	PANTHER	PTHR12810	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29	coord: 5..453
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G023920.2	CsGy1G023920.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome