CsGy1G023905 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G023905
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 22598733 .. 22599152 (+)
RNA-Seq ExpressionCsGy1G023905
SyntenyCsGy1G023905
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATAAACTACTCGTCCAAGACATATATAAACTCCGCGGGCTATATCAATTCAGCTTCCCAAGCACCACCCTAGTCCTTACATGTGAGGAAAAGGAAATACGAAGAGTCAGATATGCGTCGCAGCTGCACTTAGGAACTTGTAATTGCATTCGCGTTTCTTCGCGCAACAACTACAACAATACAACCCATTTCCCTACGCAATACACCGCCTTTGGCAAGGACGCGCCGTTCTTCGCTGAACAACAATTTCAATCTTCTGATTTCAGGGGGAAGGCAGCGGGCGGCCTATCGCATTCGCAGCAGAACTTCCCCCTTCCTATTCCCGGACTTCCGAACATTCTCCCGGTTTCCACCTCTCATCTCAAATTCCTCAATCCCTCTTTATTTTTCATCTCTGCACTATTCTCCATCAATTGA

mRNA sequence

ATGCATAAACTACTCGTCCAAGACATATATAAACTCCGCGGGCTATATCAATTCAGCTTCCCAAGCACCACCCTAGTCCTTACATGTGAGGAAAAGGAAATACGAAGAGTCAGATATGCGTCGCAGCTGCACTTAGGAACTTGTAATTGCATTCGCGTTTCTTCGCGCAACAACTACAACAATACAACCCATTTCCCTACGCAATACACCGCCTTTGGCAAGGACGCGCCGTTCTTCGCTGAACAACAATTTCAATCTTCTGATTTCAGGGGGAAGGCAGCGGGCGGCCTATCGCATTCGCAGCAGAACTTCCCCCTTCCTATTCCCGGACTTCCGAACATTCTCCCGGTTTCCACCTCTCATCTCAAATTCCTCAATCCCTCTTTATTTTTCATCTCTGCACTATTCTCCATCAATTGA

Coding sequence (CDS)

ATGCATAAACTACTCGTCCAAGACATATATAAACTCCGCGGGCTATATCAATTCAGCTTCCCAAGCACCACCCTAGTCCTTACATGTGAGGAAAAGGAAATACGAAGAGTCAGATATGCGTCGCAGCTGCACTTAGGAACTTGTAATTGCATTCGCGTTTCTTCGCGCAACAACTACAACAATACAACCCATTTCCCTACGCAATACACCGCCTTTGGCAAGGACGCGCCGTTCTTCGCTGAACAACAATTTCAATCTTCTGATTTCAGGGGGAAGGCAGCGGGCGGCCTATCGCATTCGCAGCAGAACTTCCCCCTTCCTATTCCCGGACTTCCGAACATTCTCCCGGTTTCCACCTCTCATCTCAAATTCCTCAATCCCTCTTTATTTTTCATCTCTGCACTATTCTCCATCAATTGA

Protein sequence

MHKLLVQDIYKLRGLYQFSFPSTTLVLTCEEKEIRRVRYASQLHLGTCNCIRVSSRNNYNNTTHFPTQYTAFGKDAPFFAEQQFQSSDFRGKAAGGLSHSQQNFPLPIPGLPNILPVSTSHLKFLNPSLFFISALFSIN*
Homology
[Close]
BLAST of CsGy1G023905 vs. NCBI nr
Match: KGN65863.1 (hypothetical protein Csa_023209 [Cucumis sativus])

HSP 1 Score: 285 bits (729), Expect = 5.22e-97
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0 

Query: 1   MHKLLVQDIYKLRGLYQFSFPSTTLVLTCEEKEIRRVRYASQLHLGTCNCIRVSSRNNYN 60
           MHKLLVQDIYKLRGLYQFSFPSTTLVLTCEEKEIRRVRYASQLHLGTCNCIRVSSRNNYN
Sbjct: 1   MHKLLVQDIYKLRGLYQFSFPSTTLVLTCEEKEIRRVRYASQLHLGTCNCIRVSSRNNYN 60

Query: 61  NTTHFPTQYTAFGKDAPFFAEQQFQSSDFRGKAAGGLSHSQQNFPLPIPGLPNILPVSTS 120
           NTTHFPTQYTAFGKDAPFFAEQQFQSSDFRGKAAGGLSHSQQNFPLPIPGLPNILPVSTS
Sbjct: 61  NTTHFPTQYTAFGKDAPFFAEQQFQSSDFRGKAAGGLSHSQQNFPLPIPGLPNILPVSTS 120

Query: 121 HLKFLNPSLFFISALFSIN 139
           HLKFLNPSLFFISALFSIN
Sbjct: 121 HLKFLNPSLFFISALFSIN 139

[Close]
BLAST of CsGy1G023905 vs. ExPASy TrEMBL
Match: A0A0A0LVP0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533700 PE=4 SV=1)

HSP 1 Score: 285 bits (729), Expect = 2.53e-97
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0 

Query: 1   MHKLLVQDIYKLRGLYQFSFPSTTLVLTCEEKEIRRVRYASQLHLGTCNCIRVSSRNNYN 60
           MHKLLVQDIYKLRGLYQFSFPSTTLVLTCEEKEIRRVRYASQLHLGTCNCIRVSSRNNYN
Sbjct: 1   MHKLLVQDIYKLRGLYQFSFPSTTLVLTCEEKEIRRVRYASQLHLGTCNCIRVSSRNNYN 60

Query: 61  NTTHFPTQYTAFGKDAPFFAEQQFQSSDFRGKAAGGLSHSQQNFPLPIPGLPNILPVSTS 120
           NTTHFPTQYTAFGKDAPFFAEQQFQSSDFRGKAAGGLSHSQQNFPLPIPGLPNILPVSTS
Sbjct: 61  NTTHFPTQYTAFGKDAPFFAEQQFQSSDFRGKAAGGLSHSQQNFPLPIPGLPNILPVSTS 120

Query: 121 HLKFLNPSLFFISALFSIN 139
           HLKFLNPSLFFISALFSIN
Sbjct: 121 HLKFLNPSLFFISALFSIN 139

The following BLAST results are available for this feature:
BLAST of CsGy1G023905 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G023905 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65863.15.22e-97100.00hypothetical protein Csa_023209 [Cucumis sativus][more]
BLAST of CsGy1G023905 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVP02.53e-97100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533700 PE=4 SV=1[more]
BLAST of CsGy1G023905 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G023905.1CsGy1G023905.1mRNA