CsGy1G022180 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G022180
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	iron-sulfur assembly protein IscA-like 2, mitochondrial
Location	Gy14Chr1: 20977950 .. 20980325 (+)
RNA-Seq Expression	CsGy1G022180
Synteny	CsGy1G022180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCCTAGATCACTAATTCAGAGGGTAACACCATACTTGGTGGCACGTATCAAGGAGAATCAAAGGCTTCTTAGCTCTTCTGCTTCAGCCTATCAAGAAGCATTGCCTTTGTCTCCATCTCCATCCCCATCTGCCCCTGTTGATACCATTCACATGACTGATAGTTGCATTCGGGTATTCTATATATATATCCTTTTTTGCACATACATTTGGTAGATGAATTCTTCATCCATTTCACTGTTGTCCTCTGGTTTAGTTCTTGATTTTCTGGATTATTCTCTTATGGTGCGCCATCCAGGGCTATAGTTTTTGGGTTTCAGGATCCTAATAAATTGTTGTGCCTTTTAGGTTCTTCAAATTCAATTAATTAAATGAATTTTGAGCATTTCTCTTGTTACCTTAGCAGTTCAACCTATATTGGTGTTCATAGAGCAGTCACGATTTACATTTTTGCTTAGTTTTGACATGCCTTGCAGAGAATGAAAGAATTGCAAGATCCCAAGGAAGAAAAGATGCTTCGCTTGAGTGTAGAAACTGGGGGGTGTTCTGGATTTCAATATGTTTTCAATTTGGATGGAAAAACCAATCCTGATGATAGGTTTGACAAATATTAACTCAGTGATTACTGCTTACTTGGTTTTTCACGTAAAGTTTGTCTCTGATGTTTGATTTTACGTAAAAAAAAGTTTCCTCTATTTTTCATGTTTGCAGGATATATGAGAAAGAGGGAGTTAAATTGGTAGTTGATAACATCTCATACGATTTTGTAAAAGGAGCAACAATTGATTATGTTGAAGAGCTGATTCGTTCTGCTTTTGTTGTAAGTGAAACTTATCTCTCATTGTTGCTGCCTCATTGCTTTTGCTTAGATATGTTTATTTCATACCAATGTGTGGACCATAGCAAATTATAGTTCTATGACATCTATTCAAGTAATGGAGTAATGATAAAGAAAGTTGAAATACTGAAAACAAACTTCCACTAACGCCATCCTTAGAATATTTATCCTTTGACTATTACACCATGCCTTTTATGGAATCTCTCTCCCTTCATAAGGACTGTTTCGGTATCTTATTTAGAGTATTATTTACGTTGAGAAATATACTGAGATGTAAATCCTCCAGCCCTTAGCTGGTAAACTCTTCACACTGTAGATTCTTACCTGATATTTACACTCGATGACCACTCTCGTCTACCTTCCTCATTTTTATGTATGCACTCGACTTCTAACTGTAAGAGGTGGCGTTCTCCATTTTGCTCTTCCTTGAATATATGTGAACTGTAGAATATAACTTAGGAAAAGTTTTCATTGCCTCGTCAGTATGGATACTTCTCTAATTCTTTGTAACTGCTCCAGTTTCGTTTTAGAATGATGTGGGTATAGCAACAATCTAAAATGTTTAGTTCAGAAAATTTTTAGTGTGAACAATAAGTAGATGGTGATACTAAAGAATTCTTAAGAATTTCTCCTCGAAGCTACAGCTTGGCTAAAGAAACATTTTATTGATAGATGAAATCAAAGAACTCCAAAACACCAAAGAAAAGAGACAAAGAAAGGTGTTTACAAAAGAGACTGCCAATTAGTAACTAAGAAAGATAAAAGTATTATGTTTGAAAGGAAAAGAAAGAAAAGAAAAAGCAAAAAGAAAGTGATGTACCCTTGAGCAGTACGATCTACAAGTCGTATTTTATCCAAAACTTCCCTATGGAATCCTATCTAACCCATCTTAGGATCTGTTTAGATTGACTAGAGAAAAAATGTTTTTTCAAAAAGTCATTTTTATCCTAGGTTGGCCGTTGGCGGCAACTGGCGAGAGAGATGGCTGGCGTTGGCAACTGGAAGAGGGTTAGGGCAGAGAGGGTTGGTGGTCTCCTGGGGAGAATCGGAGAAGAGAAGGTGGAGTGCGTGAAGCTTTTCGTTTTAAGAGAATAAGAAAAAAAACCCTAAAAATTATTGCCATTGGGCCGGACTAATGTGCCGTTTCTATGGGTTTTTTTTCCAGCCATGTTAGGACCGTGTTCAAAATTTTAAAAAAATCGACATGCCAGCTGGTGTGTCAGTGTTGGAAACGTGTTCGACACTGATACTTGGCCATCTTAGGAGCGTCGATGCTTCTTAGTTTTTATTTAAACTCTTTTGATAAAAATATTTAAAATAAACTTTAAAAGTGTTTCAAAAGCTATTTTGAGTAGTTGGTAAACTCTTTGGTTTTTCTCCAAATAACTGCAAATTAAGTGATTGGAAAGTGAAAACGAACCCACGTGGGATTATTTGCACTGCAGAAGTTGAATTCTTGTTACGTGCAGGTGAGTACAAATCCAAGTGCCGTTGGTGGGTGTAGTTGTAAAAGTTCTTTCATGGTCAAACAATAA

mRNA sequence

ATGGGCCCTAGATCACTAATTCAGAGGGTAACACCATACTTGGTGGCACGTATCAAGGAGAATCAAAGGCTTCTTAGCTCTTCTGCTTCAGCCTATCAAGAAGCATTGCCTTTGTCTCCATCTCCATCCCCATCTGCCCCTGTTGATACCATTCACATGACTGATAGTTGCATTCGGAGAATGAAAGAATTGCAAGATCCCAAGGAAGAAAAGATGCTTCGCTTGAGTGTAGAAACTGGGGGGTGTTCTGGATTTCAATATGTTTTCAATTTGGATGGAAAAACCAATCCTGATGATAGGATATATGAGAAAGAGGGAGTTAAATTGGTAGTTGATAACATCTCATACGATTTTGTAAAAGGAGCAACAATTGATTATGTTGAAGAGCTGATTCGTTCTGCTTTTGTTGTGAGTACAAATCCAAGTGCCGTTGGTGGGTGTAGTTGTAAAAGTTCTTTCATGGTCAAACAATAA

Coding sequence (CDS)

ATGGGCCCTAGATCACTAATTCAGAGGGTAACACCATACTTGGTGGCACGTATCAAGGAGAATCAAAGGCTTCTTAGCTCTTCTGCTTCAGCCTATCAAGAAGCATTGCCTTTGTCTCCATCTCCATCCCCATCTGCCCCTGTTGATACCATTCACATGACTGATAGTTGCATTCGGAGAATGAAAGAATTGCAAGATCCCAAGGAAGAAAAGATGCTTCGCTTGAGTGTAGAAACTGGGGGGTGTTCTGGATTTCAATATGTTTTCAATTTGGATGGAAAAACCAATCCTGATGATAGGATATATGAGAAAGAGGGAGTTAAATTGGTAGTTGATAACATCTCATACGATTTTGTAAAAGGAGCAACAATTGATTATGTTGAAGAGCTGATTCGTTCTGCTTTTGTTGTGAGTACAAATCCAAGTGCCGTTGGTGGGTGTAGTTGTAAAAGTTCTTTCATGGTCAAACAATAA

Protein sequence

MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPLSPSPSPSAPVDTIHMTDSCIRRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ*

Homology

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BLAST of CsGy1G022180 vs. ExPASy Swiss-Prot
Match: Q8LCY2 (Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g03905 PE=1 SV=2)

HSP 1 Score: 215.3 bits (547), Expect = 4.9e-55
Identity = 110/155 (70.97%), Postives = 128/155 (82.58%), Query Frame = 0


Query: 4   RSLIQRVTPYLVARIKENQRLLS-SSASAYQEALPLSPSPSPSAPVDTIHMTDSCIRRMK 63
           RSL++RV PYL  RI+EN RLL+ SSASA +EA   S S   S+  D +H++D+CIRRMK
Sbjct: 3   RSLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIRRMK 62

Query: 64  ELQDPK-EEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVKG 123
           ELQ  + E+KMLRL VETGGCSGFQY F LD +TNPDDR++EK GVKLVVDN+SYD VKG
Sbjct: 63  ELQSSEPEKKMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDLVKG 122

Query: 124 ATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 157
           ATIDY EELIR+AFVV+ NPSAVGGCSCKSSFMVK
Sbjct: 123 ATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157

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BLAST of CsGy1G022180 vs. ExPASy Swiss-Prot
Match: Q2TBG7 (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Bos taurus OX=9913 GN=ISCA2 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.1e-29
Identity = 75/147 (51.02%), Postives = 94/147 (63.95%), Query Frame = 0


Query: 10  VTPYLVARIKENQRLLSSSASAYQEALPLSPSPSPSAPVDTIHMTDSCIRRMKELQDPKE 69
           VTP+      +  RLL  +AS    AL      SP A    IH+TDSC++R+ E+ +  E
Sbjct: 15  VTPW------QRSRLL--AASRGPRALREVSFSSPEAGEGQIHLTDSCVQRLLEITEGSE 74

Query: 70  EKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVKGATIDYVEE 129
              LRL VE GGCSGFQY F+LD   NPDDR++EK G ++VVD+ S  FVKGA +D+ +E
Sbjct: 75  --FLRLEVEGGGCSGFQYKFSLDTVINPDDRVFEKGGARVVVDSDSLAFVKGAHVDFSQE 134

Query: 130 LIRSAFVVSTNPSAVGGCSCKSSFMVK 157
           LIRS+F V  NP A  GCSC SSF VK
Sbjct: 135 LIRSSFQVLNNPQAQQGCSCGSSFSVK 151

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BLAST of CsGy1G022180 vs. ExPASy Swiss-Prot
Match: Q86U28 (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Homo sapiens OX=9606 GN=ISCA2 PE=1 SV=2)

HSP 1 Score: 126.3 bits (316), Expect = 3.0e-28
Identity = 66/129 (51.16%), Postives = 87/129 (67.44%), Query Frame = 0


Query: 28  SASAYQEALPLSPSPSPSAPVDTIHMTDSCIRRMKELQDPKEEKMLRLSVETGGCSGFQY 87
           +AS   +A   + S SP A    I +TDSC++R+ E+ +  E   LRL VE GGCSGFQY
Sbjct: 27  TASLGPQARREASSSSPEAGEGQIRLTDSCVQRLLEITEGSE--FLRLQVEGGGCSGFQY 86

Query: 88  VFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGC 147
            F+LD   NPDDR++E+ G ++VVD+ S  FVKGA +D+ +ELIRS+F V  NP A  GC
Sbjct: 87  KFSLDTVINPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGC 146

Query: 148 SCKSSFMVK 157
           SC SSF +K
Sbjct: 147 SCGSSFSIK 153

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BLAST of CsGy1G022180 vs. ExPASy Swiss-Prot
Match: Q5R788 (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Pongo abelii OX=9601 GN=ISCA2 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.0e-28
Identity = 66/129 (51.16%), Postives = 87/129 (67.44%), Query Frame = 0


Query: 28  SASAYQEALPLSPSPSPSAPVDTIHMTDSCIRRMKELQDPKEEKMLRLSVETGGCSGFQY 87
           +AS   +A   + S SP A    I +TDSC++R+ E+ +  E   LRL VE GGCSGFQY
Sbjct: 27  AASLGPQARREASSSSPEAGEGQIRLTDSCVQRLLEITEGSE--FLRLQVEGGGCSGFQY 86

Query: 88  VFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGC 147
            F+LD   NPDDR++E+ G ++VVD+ S  FVKGA +D+ +ELIRS+F V  NP A  GC
Sbjct: 87  KFSLDTVINPDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGC 146

Query: 148 SCKSSFMVK 157
           SC SSF +K
Sbjct: 147 SCGSSFSIK 153

[Close]

BLAST of CsGy1G022180 vs. ExPASy Swiss-Prot
Match: Q9DCB8 (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Mus musculus OX=10090 GN=Isca2 PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.5e-27
Identity = 63/116 (54.31%), Postives = 80/116 (68.97%), Query Frame = 0


Query: 41  SPSPSAPVDTIHMTDSCIRRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDR 100
           S  P A    I +TDSC++R+ E+ +  E   LRL VE GGCSGFQY F+LD   NPDDR
Sbjct: 40  SSIPEAGEGQIRLTDSCVQRLLEITEGSE--FLRLQVEGGGCSGFQYKFSLDTVINPDDR 99

Query: 101 IYEKEGVKLVVDNISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 157
           ++E+ G ++VVD+ S  FVKGA +D+ +ELIRS+F V  NP A  GCSC SSF VK
Sbjct: 100 VFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFSVK 153

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BLAST of CsGy1G022180 vs. NCBI nr
Match: XP_004152897.1 (iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucumis sativus] >KGN65682.1 hypothetical protein Csa_019688 [Cucumis sativus])

HSP 1 Score: 311 bits (798), Expect = 6.06e-107
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPLSPSPSPSAPVDTIHMTDSCIRR 60
           MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPLSPSPSPSAPVDTIHMTDSCIRR
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPLSPSPSPSAPVDTIHMTDSCIRR 60

Query: 61  MKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVK 120
           MKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVK
Sbjct: 61  MKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVK 120

Query: 121 GATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157
           GATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 GATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157

[Close]

BLAST of CsGy1G022180 vs. NCBI nr
Match: XP_008457520.2 (PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucumis melo] >XP_008457521.1 PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucumis melo] >XP_008457522.1 PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucumis melo])

HSP 1 Score: 298 bits (762), Expect = 2.01e-101
Identity = 153/159 (96.23%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPLS--PSPSPSAPVDTIHMTDSCI 60
           MGPRSLIQRVTPYLVARIKENQRLLSSSA+AYQEA  LS  PSPSPSAPVDTIHMTDSCI
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSATAYQEASSLSSSPSPSPSAPVDTIHMTDSCI 60

Query: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDF 120
           RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKT PDDRIYEKEGVKLVVDNISYDF
Sbjct: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTTPDDRIYEKEGVKLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157
           VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of CsGy1G022180 vs. NCBI nr
Match: XP_038893859.1 (iron-sulfur assembly protein IscA-like 2, mitochondrial [Benincasa hispida] >XP_038893860.1 iron-sulfur assembly protein IscA-like 2, mitochondrial [Benincasa hispida] >XP_038893861.1 iron-sulfur assembly protein IscA-like 2, mitochondrial [Benincasa hispida])

HSP 1 Score: 273 bits (699), Expect = 7.56e-92
Identity = 137/157 (87.26%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPLSPSPSPSAPVDTIHMTDSCIRR 60
           M  RSLIQRVTPYLVARI+ENQRLLSSS SA+QEA      PSPS  VDTIH+TD+CIRR
Sbjct: 1   MASRSLIQRVTPYLVARIRENQRLLSSSVSAHQEASSSLTCPSPSPSVDTIHLTDNCIRR 60

Query: 61  MKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVK 120
           MKELQDPKEEKMLRLSVETGGCSGFQYVF+LD KTNPDDR+YEKEGVKL+VDNISYDFVK
Sbjct: 61  MKELQDPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVKLIVDNISYDFVK 120

Query: 121 GATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157
           GATIDYVEELIRSAF+VSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 GATIDYVEELIRSAFIVSTNPSAVGGCSCKSSFMVKQ 157

[Close]

BLAST of CsGy1G022180 vs. NCBI nr
Match: XP_022964844.1 (iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucurbita moschata] >XP_023520276.1 iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271 bits (692), Expect = 9.44e-91
Identity = 138/159 (86.79%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPL--SPSPSPSAPVDTIHMTDSCI 60
           M PR LIQR+TP+LVARI+ENQRLLSSS SA+QEA  L  SPSPS S P+DTI MTD+CI
Sbjct: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60

Query: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDF 120
           RRMKELQ PKEEKMLRLSVETGGCSGFQYVF+LD KTNPDDR+YEKEGV+LVVDNISYDF
Sbjct: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157
           VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of CsGy1G022180 vs. NCBI nr
Match: XP_022970473.1 (iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucurbita maxima])

HSP 1 Score: 268 bits (684), Expect = 1.56e-89
Identity = 137/159 (86.16%), Postives = 146/159 (91.82%), Query Frame = 0


Query: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPL--SPSPSPSAPVDTIHMTDSCI 60
           M  R LIQR+TP+LVARI+ENQRLLSSS SA+QEA  L  SPSPS S P+DTI MTD+CI
Sbjct: 1   MASRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60

Query: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDF 120
           RRMKELQ PKEEKMLRLSVETGGCSGFQYVF+LD KTNPDDR+YEKEGV+LVVDNISYDF
Sbjct: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157
           VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of CsGy1G022180 vs. ExPASy TrEMBL
Match: A0A0A0LXX8 (Fe-S_biosyn domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G496290 PE=4 SV=1)

HSP 1 Score: 311 bits (798), Expect = 2.94e-107
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPLSPSPSPSAPVDTIHMTDSCIRR 60
           MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPLSPSPSPSAPVDTIHMTDSCIRR
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPLSPSPSPSAPVDTIHMTDSCIRR 60

Query: 61  MKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVK 120
           MKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVK
Sbjct: 61  MKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVK 120

Query: 121 GATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157
           GATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 GATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157

[Close]

BLAST of CsGy1G022180 vs. ExPASy TrEMBL
Match: A0A1S3C5P3 (iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497193 PE=4 SV=1)

HSP 1 Score: 298 bits (762), Expect = 9.72e-102
Identity = 153/159 (96.23%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPLS--PSPSPSAPVDTIHMTDSCI 60
           MGPRSLIQRVTPYLVARIKENQRLLSSSA+AYQEA  LS  PSPSPSAPVDTIHMTDSCI
Sbjct: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSATAYQEASSLSSSPSPSPSAPVDTIHMTDSCI 60

Query: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDF 120
           RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKT PDDRIYEKEGVKLVVDNISYDF
Sbjct: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTTPDDRIYEKEGVKLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157
           VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of CsGy1G022180 vs. ExPASy TrEMBL
Match: A0A6J1HPD1 (iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111464825 PE=4 SV=1)

HSP 1 Score: 271 bits (692), Expect = 4.57e-91
Identity = 138/159 (86.79%), Postives = 147/159 (92.45%), Query Frame = 0


Query: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPL--SPSPSPSAPVDTIHMTDSCI 60
           M PR LIQR+TP+LVARI+ENQRLLSSS SA+QEA  L  SPSPS S P+DTI MTD+CI
Sbjct: 1   MAPRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60

Query: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDF 120
           RRMKELQ PKEEKMLRLSVETGGCSGFQYVF+LD KTNPDDR+YEKEGV+LVVDNISYDF
Sbjct: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157
           VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of CsGy1G022180 vs. ExPASy TrEMBL
Match: A0A6J1I3Y1 (iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111469443 PE=4 SV=1)

HSP 1 Score: 268 bits (684), Expect = 7.57e-90
Identity = 137/159 (86.16%), Postives = 146/159 (91.82%), Query Frame = 0


Query: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQEALPL--SPSPSPSAPVDTIHMTDSCI 60
           M  R LIQR+TP+LVARI+ENQRLLSSS SA+QEA  L  SPSPS S P+DTI MTD+CI
Sbjct: 1   MASRLLIQRLTPFLVARIRENQRLLSSSVSAHQEASSLLASPSPSSSGPIDTIQMTDNCI 60

Query: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDF 120
           RRMKELQ PKEEKMLRLSVETGGCSGFQYVF+LD KTNPDDR+YEKEGV+LVVDNISYDF
Sbjct: 61  RRMKELQAPKEEKMLRLSVETGGCSGFQYVFDLDDKTNPDDRVYEKEGVRLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157
           VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of CsGy1G022180 vs. ExPASy TrEMBL
Match: A0A6J1DIX6 (iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111020448 PE=4 SV=1)

HSP 1 Score: 261 bits (666), Expect = 4.20e-87
Identity = 131/159 (82.39%), Postives = 145/159 (91.19%), Query Frame = 0


Query: 1   MGPRSLIQRVTPYLVARIKENQRLLSSSASAYQE--ALPLSPSPSPSAPVDTIHMTDSCI 60
           M PR LIQR+TP+ +ARI+ENQRLLSSS SA+QE  +L  SPSPS S  +DTIHMTD+CI
Sbjct: 1   MVPRLLIQRLTPHFIARIRENQRLLSSSVSAHQEVPSLLTSPSPSSSVLIDTIHMTDNCI 60

Query: 61  RRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDF 120
           ++MKELQ+P EEKMLRLSVETGGCSGFQYVFNLD KTNPDDR+YEK+GVKLVVDNISYDF
Sbjct: 61  QKMKELQEPMEEKMLRLSVETGGCSGFQYVFNLDDKTNPDDRVYEKDGVKLVVDNISYDF 120

Query: 121 VKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVKQ 157
           VKGATIDY EELIRSAFVV+TNPSAVGGCSCKSSFMVKQ
Sbjct: 121 VKGATIDYAEELIRSAFVVTTNPSAVGGCSCKSSFMVKQ 159

[Close]

BLAST of CsGy1G022180 vs. TAIR 10
Match: AT5G03905.1 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 215.3 bits (547), Expect = 3.5e-56
Identity = 110/155 (70.97%), Postives = 128/155 (82.58%), Query Frame = 0


Query: 4   RSLIQRVTPYLVARIKENQRLLS-SSASAYQEALPLSPSPSPSAPVDTIHMTDSCIRRMK 63
           RSL++RV PYL  RI+EN RLL+ SSASA +EA   S S   S+  D +H++D+CIRRMK
Sbjct: 3   RSLVKRVAPYLAGRIRENHRLLNFSSASAIKEASSSSSSQPESSSNDVVHLSDNCIRRMK 62

Query: 64  ELQDPK-EEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVDNISYDFVKG 123
           ELQ  + E+KMLRL VETGGCSGFQY F LD +TNPDDR++EK GVKLVVDN+SYD VKG
Sbjct: 63  ELQSSEPEKKMLRLGVETGGCSGFQYKFELDNRTNPDDRVFEKNGVKLVVDNVSYDLVKG 122

Query: 124 ATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFMVK 157
           ATIDY EELIR+AFVV+ NPSAVGGCSCKSSFMVK
Sbjct: 123 ATIDYEEELIRAAFVVAVNPSAVGGCSCKSSFMVK 157

[Close]

BLAST of CsGy1G022180 vs. TAIR 10
Match: AT2G16710.3 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 72.0 bits (175), Expect = 4.8e-13
Identity = 38/117 (32.48%), Postives = 64/117 (54.70%), Query Frame = 0


Query: 44  PSAPVDTIHMTDSCIRRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPD----- 103
           P+     + +TD    R+  L   +++  LRL V+  GC+G  Y  N  GKT+ +     
Sbjct: 16  PALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLNYAGKTSGNDEKGK 75

Query: 104 -DRIYEKEGVKLVVDNISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFM 155
            D + E++GV+++V+  +   V G  +D+V++ +RS FV   NP++ G C C  SFM
Sbjct: 76  FDELVEEKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVF-INPNSQGQCGCGESFM 131

[Close]

BLAST of CsGy1G022180 vs. TAIR 10
Match: AT2G16710.1 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.4e-12
Identity = 35/111 (31.53%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 44  PSAPVDTIHMTDSCIRRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYE 103
           P+     + +TD    R+  L   +++  LRL V+  GC+G  Y  N   +    D + E
Sbjct: 16  PALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLNYADEKGKFDELVE 75

Query: 104 KEGVKLVVDNISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSFM 155
           ++GV+++V+  +   V G  +D+V++ +RS FV   NP++ G C C  SFM
Sbjct: 76  EKGVRILVEPKALMHVIGTKMDFVDDKLRSEFVF-INPNSQGQCGCGESFM 125

[Close]

BLAST of CsGy1G022180 vs. TAIR 10
Match: AT2G36260.1 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 69.3 bits (168), Expect = 3.1e-12
Identity = 36/101 (35.64%), Postives = 60/101 (59.41%), Query Frame = 0


Query: 53  MTDSCIRRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYEKEGVKLVVD 112
           ++D+   R+++L   +++  LRL+VE  GC+G  YV N   +    D + E++GVK++VD
Sbjct: 8   LSDTAAARIRQLLQHQQKPFLRLAVEAKGCNGLSYVLNYAQEKGKFDEVVEEKGVKILVD 67

Query: 113 NISYDFVKGATIDYVEELIRSAFVVSTNPSAVGGCSCKSSF 154
             +   V G  +D+V++ +RS FV   NP+A   C C  SF
Sbjct: 68  PKAVMHVIGTEMDFVDDKLRSEFVF-VNPNAT-KCGCGESF 106

[Close]

BLAST of CsGy1G022180 vs. TAIR 10
Match: AT2G16710.2 (Iron-sulphur cluster biosynthesis family protein )

HSP 1 Score: 52.4 bits (124), Expect = 3.9e-07
Identity = 24/89 (26.97%), Postives = 47/89 (52.81%), Query Frame = 0


Query: 44  PSAPVDTIHMTDSCIRRMKELQDPKEEKMLRLSVETGGCSGFQYVFNLDGKTNPDDRIYE 103
           P+     + +TD    R+  L   +++  LRL V+  GC+G  Y  N   +    D + E
Sbjct: 16  PALRKQVLTLTDEAASRVHHLLQQRQKPFLRLGVKARGCNGLSYTLNYADEKGKFDELVE 75

Query: 104 KEGVKLVVDNISYDFVKGATIDYVEELIR 133
           ++GV+++V+  +   V G  +D+V++ +R
Sbjct: 76  EKGVRILVEPKALMHVIGTKMDFVDDKLR 104

The following BLAST results are available for this feature:

BLAST of CsGy1G022180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LCY2	4.9e-55	70.97	Iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q2TBG7	2.1e-29	51.02	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Bos taurus OX=9913 GN=I...	[more]
Q86U28	3.0e-28	51.16	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Homo sapiens OX=9606 GN...	[more]
Q5R788	3.0e-28	51.16	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Pongo abelii OX=9601 GN...	[more]
Q9DCB8	1.5e-27	54.31	Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Mus musculus OX=10090 G...	[more]

BLAST of CsGy1G022180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152897.1	6.06e-107	100.00	iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucumis sativus] >KGN65...	[more]
XP_008457520.2	2.01e-101	96.23	PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucumis melo...	[more]
XP_038893859.1	7.56e-92	87.26	iron-sulfur assembly protein IscA-like 2, mitochondrial [Benincasa hispida] >XP_...	[more]
XP_022964844.1	9.44e-91	86.79	iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucurbita moschata] >XP...	[more]
XP_022970473.1	1.56e-89	86.16	iron-sulfur assembly protein IscA-like 2, mitochondrial [Cucurbita maxima]	[more]

BLAST of CsGy1G022180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXX8	2.94e-107	100.00	Fe-S_biosyn domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G496290...	[more]
A0A1S3C5P3	9.72e-102	96.23	iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Cucumis melo OX=3656 ...	[more]
A0A6J1HPD1	4.57e-91	86.79	iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Cucurbita moschata OX...	[more]
A0A6J1I3Y1	7.57e-90	86.16	iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Cucurbita maxima OX=3...	[more]
A0A6J1DIX6	4.20e-87	82.39	iron-sulfur assembly protein IscA-like 2, mitochondrial OS=Momordica charantia O...	[more]

BLAST of CsGy1G022180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03905.1	3.5e-56	70.97	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G16710.3	4.8e-13	32.48	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G16710.1	1.4e-12	31.53	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G36260.1	3.1e-12	35.64	Iron-sulphur cluster biosynthesis family protein	[more]
AT2G16710.2	3.9e-07	26.97	Iron-sulphur cluster biosynthesis family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035903	HesB-like domain superfamily	GENE3D	2.60.300.12		coord: 50..157 e-value: 8.2E-34 score: 118.0
IPR035903	HesB-like domain superfamily	SUPERFAMILY	89360	HesB-like domain	coord: 50..143
IPR000361	FeS cluster biogenesis	PFAM	PF01521	Fe-S_biosyn	coord: 51..150 e-value: 3.2E-15 score: 56.3
IPR016092	FeS cluster insertion protein	TIGRFAM	TIGR00049	TIGR00049	coord: 51..155 e-value: 2.9E-33 score: 112.2
None	No IPR available	PANTHER	PTHR43011:SF4	BNACNNG10620D PROTEIN	coord: 4..157
None	No IPR available	PANTHER	PTHR43011	IRON-SULFUR CLUSTER ASSEMBLY 2 HOMOLOG, MITOCHONDRIAL	coord: 4..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G022180.1	CsGy1G022180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0106035	protein maturation by [4Fe-4S] cluster transfer
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding