CsGy1G021897 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G021897
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 20658966 .. 20659341 (-)
RNA-Seq ExpressionCsGy1G021897
SyntenyCsGy1G021897
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATATCACGACTGGGGAATGAATACGCGAAGAAATTTGGTTATAAACCAACCCGACTCAGCCCAGGCGGCCCCGACCCGTACCATCATTAGCAACGATCTGATTCAGGGGTGTTTTTCGGTCAGTTGAAGAAAGAACAGCCCCTGGCCCCAAAACACACTTCATTTGAAAATTGGTCATTTCCATTTCTAGATTCATTTGATTCAAGAAATACCGAAAATGCCAATGTGCAGTCATTGCCAAAGCATCAAGATTCAGAGAAGCATTTGGATTCATTTATAGCTGTTTCTTGTTTGGGCCAAGAGAATGGACGACATCATATCAAATGATCTCCAAGGAACGAGCTAAGAAGGTGATCCAGCTTCGATTTTGA

mRNA sequence

ATGAAATATCACGACTGGGGAATGAATACGCGAAGAAATTTGGTTATAAACCAACCCGACTCAGCCCAGGCGGCCCCGACCCGTACCATCATTAGCAACGATCTGATTCAGGGGTGTTTTTCGAAATACCGAAAATGCCAATGTGCAGTCATTGCCAAAGCATCAAGATTCAGAGAAGCATTTGGATTCATTTATAGCTGTTTCTTGTTTGGGCCAAGAGAATGGACGACATCATATCAAATGATCTCCAAGGAACGAGCTAAGAAGGTGATCCAGCTTCGATTTTGA

Coding sequence (CDS)

ATGAAATATCACGACTGGGGAATGAATACGCGAAGAAATTTGGTTATAAACCAACCCGACTCAGCCCAGGCGGCCCCGACCCGTACCATCATTAGCAACGATCTGATTCAGGGGTGTTTTTCGAAATACCGAAAATGCCAATGTGCAGTCATTGCCAAAGCATCAAGATTCAGAGAAGCATTTGGATTCATTTATAGCTGTTTCTTGTTTGGGCCAAGAGAATGGACGACATCATATCAAATGATCTCCAAGGAACGAGCTAAGAAGGTGATCCAGCTTCGATTTTGA

Protein sequence

MKYHDWGMNTRRNLVINQPDSAQAAPTRTIISNDLIQGCFSKYRKCQCAVIAKASRFREAFGFIYSCFLFGPREWTTSYQMISKERAKKVIQLRF*
Homology
[Close]
BLAST of CsGy1G021897 vs. NCBI nr
Match: KGN65650.1 (hypothetical protein Csa_019803 [Cucumis sativus])

HSP 1 Score: 199 bits (507), Expect = 1.48e-64
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MKYHDWGMNTRRNLVINQPDSAQAAPTRTIISNDLIQGCFSKYRKCQCAVIAKASRFREA 60
          MKYHDWGMNTRRNLVINQPDSAQAAPTRTIISNDLIQGCFSKYRKCQCAVIAKASRFREA
Sbjct: 1  MKYHDWGMNTRRNLVINQPDSAQAAPTRTIISNDLIQGCFSKYRKCQCAVIAKASRFREA 60

Query: 61 FGFIYSCFLFGPREWTTSYQMISKERAKKVIQLRF 95
          FGFIYSCFLFGPREWTTSYQMISKERAKKVIQLRF
Sbjct: 61 FGFIYSCFLFGPREWTTSYQMISKERAKKVIQLRF 95

[Close]
BLAST of CsGy1G021897 vs. ExPASy TrEMBL
Match: A0A0A0LUP2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G478580 PE=4 SV=1)

HSP 1 Score: 199 bits (507), Expect = 7.15e-65
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MKYHDWGMNTRRNLVINQPDSAQAAPTRTIISNDLIQGCFSKYRKCQCAVIAKASRFREA 60
          MKYHDWGMNTRRNLVINQPDSAQAAPTRTIISNDLIQGCFSKYRKCQCAVIAKASRFREA
Sbjct: 1  MKYHDWGMNTRRNLVINQPDSAQAAPTRTIISNDLIQGCFSKYRKCQCAVIAKASRFREA 60

Query: 61 FGFIYSCFLFGPREWTTSYQMISKERAKKVIQLRF 95
          FGFIYSCFLFGPREWTTSYQMISKERAKKVIQLRF
Sbjct: 61 FGFIYSCFLFGPREWTTSYQMISKERAKKVIQLRF 95

The following BLAST results are available for this feature:
BLAST of CsGy1G021897 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G021897 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65650.11.48e-64100.00hypothetical protein Csa_019803 [Cucumis sativus][more]
BLAST of CsGy1G021897 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUP27.15e-65100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G478580 PE=4 SV=1[more]
BLAST of CsGy1G021897 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G021897.1CsGy1G021897.1mRNA