CsGy1G021450 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G021450
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 20174741 .. 20175375 (-)
RNA-Seq ExpressionCsGy1G021450
SyntenyCsGy1G021450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTTCTCTACCCTCACTGTGCAAGAGATGAATAGCAATGCCCTTAAAAAGAGTCTCAATTTTAAAAAGTTTAAGGTGAGAGTGGTATGTGACTGTATCGAGTCTCTTTTTAGTTCAAGTGGACTTTGAAAAAGGTATGGATGTATCTGATGCTAAAATTTTACTATTCAAAAAAGATTTTAGAAAAGCATCTCATTTTATTATAATTAAAGGGAAGAGAAACAAAATTGAATAGCCAAACTCAGAACTTTGTGGAGACATTAGAAGATGCTCTAAAGCACCCACCCAGCTTTGAGTTCTGTAAATTTGTAGCTTTGGGATCTAATTTTCGACAACTTTTCTTCAAATTTCCATGGAAAGAAGAAGTTCCCATCTTTCATCACCGCTCTCCATTTTCCTCATCTCCTTCCTCTTTTTCTTCTTCATTTCATGTAATGCCTTATCCCCAGATCGCAAATTCAACTCTCCCAGTTCTTATCGTACTTTATCGAGCTTACAGAGAAGGAGAGATCAACAGATCTCTAATTGCGGCGAGAAAGTTTCGGCTTTACAGTGTTCCCAGACCCCCAAATGCCGGTGGTGCCGGAGTGATATCATCGACGATACCTGCTTCACCAGAGCTGAGGCTTTGA

mRNA sequence

ATGGTTTTCTCTACCCTCACTGTGCAAGAGATGAATAGCAATGCCCTTAAAAAGAGTCTCAATTTTAAAAAGTTTAAGGGAAGAGAAACAAAATTGAATAGCCAAACTCAGAACTTTGTGGAGACATTAGAAGATGCTCTAAAGCACCCACCCAGCTTTGAGTTCTGTAAATTTGTAGCTTTGGGATCTAATTTTCGACAACTTTTCTTCAAATTTCCATGGAAAGAAGAAGTTCCCATCTTTCATCACCGCTCTCCATTTTCCTCATCTCCTTCCTCTTTTTCTTCTTCATTTCATGTAATGCCTTATCCCCAGATCGCAAATTCAACTCTCCCAGTTCTTATCGTACTTTATCGAGCTTACAGAGAAGGAGAGATCAACAGATCTCTAATTGCGGCGAGAAAGTTTCGGCTTTACAGTGTTCCCAGACCCCCAAATGCCGGTGGTGCCGGAGTGATATCATCGACGATACCTGCTTCACCAGAGCTGAGGCTTTGA

Coding sequence (CDS)

ATGGTTTTCTCTACCCTCACTGTGCAAGAGATGAATAGCAATGCCCTTAAAAAGAGTCTCAATTTTAAAAAGTTTAAGGGAAGAGAAACAAAATTGAATAGCCAAACTCAGAACTTTGTGGAGACATTAGAAGATGCTCTAAAGCACCCACCCAGCTTTGAGTTCTGTAAATTTGTAGCTTTGGGATCTAATTTTCGACAACTTTTCTTCAAATTTCCATGGAAAGAAGAAGTTCCCATCTTTCATCACCGCTCTCCATTTTCCTCATCTCCTTCCTCTTTTTCTTCTTCATTTCATGTAATGCCTTATCCCCAGATCGCAAATTCAACTCTCCCAGTTCTTATCGTACTTTATCGAGCTTACAGAGAAGGAGAGATCAACAGATCTCTAATTGCGGCGAGAAAGTTTCGGCTTTACAGTGTTCCCAGACCCCCAAATGCCGGTGGTGCCGGAGTGATATCATCGACGATACCTGCTTCACCAGAGCTGAGGCTTTGA

Protein sequence

MVFSTLTVQEMNSNALKKSLNFKKFKGRETKLNSQTQNFVETLEDALKHPPSFEFCKFVALGSNFRQLFFKFPWKEEVPIFHHRSPFSSSPSSFSSSFHVMPYPQIANSTLPVLIVLYRAYREGEINRSLIAARKFRLYSVPRPPNAGGAGVISSTIPASPELRL*
Homology
[Close]
BLAST of CsGy1G021450 vs. NCBI nr
Match: KAE8653205.1 (hypothetical protein Csa_019880 [Cucumis sativus])

HSP 1 Score: 322 bits (825), Expect = 8.47e-111
Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0 

Query: 1   MVFSTLTVQEMNSNALKKSLNFKKFKGRETKLNSQTQNFVETLEDALKHPPSFEFCKFVA 60
           MVFSTLTVQEMNSNALKKSLNFKKFKGRETKLNSQTQNFVETLEDALKHPPSFEFCKFVA
Sbjct: 1   MVFSTLTVQEMNSNALKKSLNFKKFKGRETKLNSQTQNFVETLEDALKHPPSFEFCKFVA 60

Query: 61  LGSNFRQLFFKFPWKEEVPIFHHRSPFSSSPSSFSSSFHVMPYPQIANSTLPVLIVLYRA 120
           LGS FRQLFFKFPWKEEVPIFHHRSPFSSSPSSFSSSFHVMPYPQIANST PVLIVLYRA
Sbjct: 61  LGSKFRQLFFKFPWKEEVPIFHHRSPFSSSPSSFSSSFHVMPYPQIANSTPPVLIVLYRA 120

Query: 121 YREGEINRSLIAARKFRLYSVPRPPNAGGAGVISSTIPASPELRL 165
           YREGEINRSLIAARKFRLYSVPRPPNAGGAGVISSTIPASPELRL
Sbjct: 121 YREGEINRSLIAARKFRLYSVPRPPNAGGAGVISSTIPASPELRL 165

The following BLAST results are available for this feature:
BLAST of CsGy1G021450 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G021450 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8653205.18.47e-11198.79hypothetical protein Csa_019880 [Cucumis sativus][more]
BLAST of CsGy1G021450 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy1G021450 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G021450.2CsGy1G021450.2mRNA