CsGy1G021010 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy1G021010
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr1: 19718941 .. 19719210 (-)
RNA-Seq ExpressionCsGy1G021010
SyntenyCsGy1G021010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGACGATATTAACGAGTTTGAAACTCCTAATGAGGAATATGATTGTTTCGACTCCACTATTGCTACAAATGCAGAGGAGGCTGAAGTAGATGATGATGATAGTGATATAGATTAGCCACCTGCTGAACTATTCGGTGTTCATGATGTTCCTGAAGCCTTCAACCAGATAGATTTGAATGAAATGAATAGTGGCTTCGATAATAATCTTGATGAAGAAAATTCGGGATCTGAGTTTGGAAAACTTATGATGATCTCGATCTTGTAA

mRNA sequence

ATGGTTGACGATATTAACGAGTTTGAAACTCCTAATGAGGAATATGATTGTTTCGACTCCACTATTGCTACAAATGCAGAGGAGGCTGAACCACCTGCTGAACTATTCGGTGTTCATGATGTTCCTGAAGCCTTCAACCAGATAGATTTGAATGAAATGAATAGTGGCTTCGATAATAATCTTGATGAAGAAAATTCGGGATCTGAGTTTGGAAAACTTATGATGATCTCGATCTTGTAA

Coding sequence (CDS)

ATGGTTGACGATATTAACGAGTTTGAAACTCCTAATGAGGAATATGATTGTTTCGACTCCACTATTGCTACAAATGCAGAGGAGGCTGAACCACCTGCTGAACTATTCGGTGTTCATGATGTTCCTGAAGCCTTCAACCAGATAGATTTGAATGAAATGAATAGTGGCTTCGATAATAATCTTGATGAAGAAAATTCGGGATCTGAGTTTGGAAAACTTATGATGATCTCGATCTTGTAA

Protein sequence

MVDDINEFETPNEEYDCFDSTIATNAEEAEPPAELFGVHDVPEAFNQIDLNEMNSGFDNNLDEENSGSEFGKLMMISIL*
Homology
[Close]
BLAST of CsGy1G021010 vs. NCBI nr
Match: KGN65554.1 (hypothetical protein Csa_019630 [Cucumis sativus])

HSP 1 Score: 157 bits (397), Expect = 2.85e-48
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MVDDINEFETPNEEYDCFDSTIATNAEEAEPPAELFGVHDVPEAFNQIDLNEMNSGFDNN 60
          MVDDINEFETPNEEYDCFDSTIATNAEEAEPPAELFGVHDVPEAFNQIDLNEMNSGFDNN
Sbjct: 1  MVDDINEFETPNEEYDCFDSTIATNAEEAEPPAELFGVHDVPEAFNQIDLNEMNSGFDNN 60

Query: 61 LDEENSGSEFGKLMMISIL 79
          LDEENSGSEFGKLMMISIL
Sbjct: 61 LDEENSGSEFGKLMMISIL 79

[Close]
BLAST of CsGy1G021010 vs. NCBI nr
Match: TYK18693.1 (hypothetical protein E5676_scaffold481G00410 [Cucumis melo var. makuwa])

HSP 1 Score: 99.4 bits (246), Expect = 1.85e-24
Identity = 55/80 (68.75%), Postives = 61/80 (76.25%), Query Frame = 0 

Query: 1   MVDDINEFET-PNEEYDCFDSTIATNAEEAE----------PPAELFGVHDVPEAFNQID 60
           ++++ NEF+T  NE+YDCFD TIATN E AE          P AELFGVHDVPEAFN ID
Sbjct: 26  IIEETNEFKTCNNEQYDCFDPTIATNVEVAEVDDDDSDIDQPLAELFGVHDVPEAFNHID 85

Query: 61  LNEMNSGFDNNLDEENSGSE 69
           LNEMNSGFDNNLDEEN GSE
Sbjct: 86  LNEMNSGFDNNLDEENLGSE 105

[Close]
BLAST of CsGy1G021010 vs. NCBI nr
Match: KAA0031959.1 (hypothetical protein E6C27_scaffold134G00410 [Cucumis melo var. makuwa] >TYK16779.1 hypothetical protein E5676_scaffold96G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 2.90e-10
Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 1  MVDDINEFETPNEEYDCFDSTIATNAEEAE----------PPAELFGVHDVPEAFN 46
          M++DIN+FET NEE +CFDSTI   AE+AE          P  ELFGVHDVPEAFN
Sbjct: 1  MIEDINKFETRNEEDNCFDSTITPIAEDAEVDDDGSDLDQPLVELFGVHDVPEAFN 56

[Close]
BLAST of CsGy1G021010 vs. ExPASy TrEMBL
Match: A0A0A0LX24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G446390 PE=4 SV=1)

HSP 1 Score: 157 bits (397), Expect = 1.38e-48
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MVDDINEFETPNEEYDCFDSTIATNAEEAEPPAELFGVHDVPEAFNQIDLNEMNSGFDNN 60
          MVDDINEFETPNEEYDCFDSTIATNAEEAEPPAELFGVHDVPEAFNQIDLNEMNSGFDNN
Sbjct: 1  MVDDINEFETPNEEYDCFDSTIATNAEEAEPPAELFGVHDVPEAFNQIDLNEMNSGFDNN 60

Query: 61 LDEENSGSEFGKLMMISIL 79
          LDEENSGSEFGKLMMISIL
Sbjct: 61 LDEENSGSEFGKLMMISIL 79

[Close]
BLAST of CsGy1G021010 vs. ExPASy TrEMBL
Match: A0A5D3D569 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold481G00410 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 8.95e-25
Identity = 55/80 (68.75%), Postives = 61/80 (76.25%), Query Frame = 0 

Query: 1   MVDDINEFET-PNEEYDCFDSTIATNAEEAE----------PPAELFGVHDVPEAFNQID 60
           ++++ NEF+T  NE+YDCFD TIATN E AE          P AELFGVHDVPEAFN ID
Sbjct: 26  IIEETNEFKTCNNEQYDCFDPTIATNVEVAEVDDDDSDIDQPLAELFGVHDVPEAFNHID 85

Query: 61  LNEMNSGFDNNLDEENSGSE 69
           LNEMNSGFDNNLDEEN GSE
Sbjct: 86  LNEMNSGFDNNLDEENLGSE 105

[Close]
BLAST of CsGy1G021010 vs. ExPASy TrEMBL
Match: A0A5D3D2L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00370 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.40e-10
Identity = 34/56 (60.71%), Postives = 39/56 (69.64%), Query Frame = 0 

Query: 1  MVDDINEFETPNEEYDCFDSTIATNAEEAE----------PPAELFGVHDVPEAFN 46
          M++DIN+FET NEE +CFDSTI   AE+AE          P  ELFGVHDVPEAFN
Sbjct: 1  MIEDINKFETRNEEDNCFDSTITPIAEDAEVDDDGSDLDQPLVELFGVHDVPEAFN 56

The following BLAST results are available for this feature:
BLAST of CsGy1G021010 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy1G021010 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN65554.12.85e-48100.00hypothetical protein Csa_019630 [Cucumis sativus][more]
TYK18693.11.85e-2468.75hypothetical protein E5676_scaffold481G00410 [Cucumis melo var. makuwa][more]
KAA0031959.12.90e-1060.71hypothetical protein E6C27_scaffold134G00410 [Cucumis melo var. makuwa] >TYK1677... [more]
BLAST of CsGy1G021010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LX241.38e-48100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G446390 PE=4 SV=1[more]
A0A5D3D5698.95e-2568.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3D2L71.40e-1060.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CsGy1G021010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G021010.2CsGy1G021010.2mRNA