CsGy1G018770 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G018770
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Location	Gy14Chr1: 16983911 .. 16986953 (-)
RNA-Seq Expression	CsGy1G018770
Synteny	CsGy1G018770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGTCTTCCTCTTCAACCCTCACTCCGCCGACCAGACCATCAGACGAACAACCACCGTCGATCTCTGAAAATGTCGTCGACCGTCTCCCAACGTTGTCTATCACTGCAAATCGTCGCCCACTGTCCATCTTTGGAACCAAACGCCCGCCGTCGACGTTGGAGACATTTACTAAGGTTAGGTTTTGTTACTGTCTCTGATTCTTCTTCTTCTTCCTTTCCATTTCTTTCTTTTTGTTTTTTTGTCTCTGTATTAAAACTTATTTGTTGAGGAACACTAGTTTTGATTGAATTTTTTTAGGGTAGATTTTGTTTTCCCAAAGAGATGAACACCAGTCCATATTAAGCCATGAAATTCTTTGATTGTAAAATCTTCACCAAAATTTTTATAATTATTTTTGATGGTGTCATTCCAATTGTTTGTTAGTGCCGATTTCTTTGCAATCTTCAGAATTCTTTTCTTTGTTTTCAAGAATTTGTGTAGGTTGGTAGAGATTTGCACTTGTGAAACAACACAAGATTTTGTTATAGTTTAAATCTATAAAAATTAGAGAATCTAACAAGTGTGATTAACGATAACAATCTGAGGAGCTTGAGAGGGTAATTGCATCCAATGTGTGTGGATCATTATTTAACAAATATGAGGAGCTTTTGATGAGAAGAAATAATTGCATTGTAGTTTTGAAATCTGTTCAACAATCCATGGATTTGCTTGGTCTTCCACAAACTACAAATAAAAGAACCATTGTGAATTTCTATTTTCAGAATGCTTCATTGTTCTTTTGCACGGTTTCAGGTACGTTTAAGTTGTATTTGAAGTCATTAGAGCCATTGAAGGCTTTGGTGATTGATGAAGCAGCACAGTTGAAAGAGTGTGAGTGTGTTATTCCAATGCAACGGGCTGACATAAAGCATGCAATCCTCATAGGTGATGAGTGCCAATTGCCAGCATTGGTTTAGAGCAATGTAAGAAAGTTTCTCCCTTTATTTAATCATATTTGTTTTAACATATATTGACACTTCGATACACATTTGTTAAACATGATAAATACCTTTTGAACACTCACGTACACATATGGATAACCTAAACATTTCATAGACTTAAAATTCTCATACCCTATTTGAGAGGCTAAGCTCATTGGGGCATCCAAAACATCTTCTCAATGTGCAATAAAGAATGCATCCATCCATAAGCCTTTTCCCAAACTCAAAATTCTACTCAAGTCAGATCTCAGATGGTCCTAATGTCAAAGCTAAAGCCTATGAAAAGACGTTTCTTCCCGGACCGATGTTCGATTCGTATTCTTTCATAAACATAAATGGTGCACGAGAAGAAAAGGATGAAATTGGACACAGTTTGAAAAACATGGTAGAGGTTGATGTTGTGCTCAAAATTGTTCATTCTTTGTCTCAAGGTATAATATTTTCTCTATTTGATCTTTGTTTTCAGTTTGGTTACTTATGTGTCAGGTGAAATTTTCTCAAATTGTTATATACATTATTATTTTGCTATTTTTATGTAAATCTCTTTCGTTTTCTTAGAAGCATGAAAGCATTTCAACTTCGTTAGTGTGTCTTTCACATGTGTGTACCATACATATCGAATACTTTAGTTTTCCTACTGCGTTTGACCCTAAGATACTAAAGCCTAAATGTATAAGACCCTTGTTGGTGGAAAAGATTTTATCTCACAGTAGTTGTAGGAAATCAAAATAGTACTAAAATATGTTAGACATATATTTAATGCTTATTTCGTACTAAATAGACCGTAGATAAAATAGCAAAACTAGAGAGTGAAATACATGGTGTGTCAAAGTAAAATTTGAAATATATTGTTAAATTGCAGAACTCATAGACTATAATTTTTCATCTGTAAAACAGTATGTCTTCTAAAAACATGCATGTCCATGTTGTGCCCATGGCGTGTCATCTTGTTTCATGTCGAATCTTTAATACATATATATTTTTTAATATAATATATGTTTGTAGCATGTGTTGACTCAAAAGGAAAGATGAGCATTGGTGTAGTGTCCCCATATTCAGCTCAAGTCGTTACCATTCAACGCAAAATTGGGAAGAAGTACAATTGTAATGGATTTAATGTGAAGGTGAGTTCAGTTGATGGCTTTCAAGGAGGGGTGGAAGATATCATTATTATTTCCACTGTTTGGTGTAATACAGGATCGTCCATCGGGTTTTTGTCGAGTAATCAAAGAACAAATGTCGCACTTACAAGAGCTAGGTAGCTGCTTTCTAGTTTCTGTATGCTTACTCTTTTTTTGTTCCTTTACTTCAACATGTATAATTCAAATTAAATTAAACGCAGGGTGAGTTTCAAGTTGTTTATTTGGAGTGAAAGGAGCTTTTAGCTCATTAACTAAATGAAAACAATTTTCAAAATTAATCATCATATGATGTTTTTCTAATTTATGATTTTTTCCTTTCGATTGACCATTATAATGTATTTGAAAACTAGTCCTTTTCTTTGACTTAAGAGTAGGTACTGTTTGTGGATATTGGGAAACATCAAAACACTGTCAAAGAGTAACTCGGTTTGGGAAGAGTTGGTTATGGATGCCAAGAATCATGGCTGTTTCTTCAATGCTAATGCCAATGCCATAACCAAAGACATCCAACAGATAGTTCCACTACTGGATTATTTCAACTCCAATGATGAAGGAAGAAGCTTGGAGATAATGGAGGGAAAGAACGTAGAAGATCATGAATCCAAGGCCAAGAGGCTGCTGCAGTTGTTGTGGCAAGATTAACTTCATAAAAAATGGAGATGGAGGTATTCTTAAATGCTTATATCCCTAAAAATGACTTCAACACTTCTATTTATGAATTTCATGAGAATTTCATGAAGCCACTGGGCTGATTTTAAATTGCTAGGATGATCAACCTGCTGGGGAAGGTAACATTAATCTTGTTTTGTTTACATTTGAACTACTCAAATTTCTATCACATAAAAATTATCATTCATGAACATAATAAAGTGGATTTTAAAGATGTAGAAAATGACTTTTGTTTAGTGTTTGATTGAACG

mRNA sequence

CCGTCTTCCTCTTCAACCCTCACTCCGCCGACCAGACCATCAGACGAACAACCACCGTCGATCTCTGAAAATGTCGTCGACCGTCTCCCAACGTTGTCTATCACTGCAAATCGTCGCCCACTGTCCATCTTTGGAACCAAACGCCCGCCGTCGACGTTGGAGACATTTACTAAGGTACGTTTAAGTTGTATTTGAAGTCATTAGAGCCATTGAAGGCTTTGGTGATTGATGAAGCAGCACAGTTGAAAGAGTGTGAGTGTGTTATTCCAATGCAACGGGCTGACATAAAGCATGCAATCCTCATAGGTGATGAGTGCCAATTGCCAGCATTGGTTTAGAGCAATATCTCAGATGGTCCTAATGTCAAAGCTAAAGCCTATGAAAAGACGTTTCTTCCCGGACCGATGTTCGATTCGTATTCTTTCATAAACATAAATGGTGCACGAGAAGAAAAGGATGAAATTGGACACAGTTTGAAAAACATGGTAGAGGTTGATGTTGTGCTCAAAATTGTTCATTCTTTGTCTCAAGCATGTGTTGACTCAAAAGGAAAGATGAGCATTGGTGTAGTGTCCCCATATTCAGCTCAAGTCGTTACCATTCAACGCAAAATTGGGAAGAAGTACAATTGTAATGGATTTAATGTGAAGGTGAGTTCAGTTGATGGCTTTCAAGGAGGGGTGGAAGATATCATTATTATTTCCACTGTTTGGTGTAATACAGGATCGTCCATCGGGTTTTTGTCGAGTAATCAAAGAACAAATGTCGCACTTACAAGAGCTAGAGTAGGTACTGTTTGTGGATATTGGGAAACATCAAAACACTGTCAAAGAGTAACTCGGTTTGGGAAGAGTTGGTTATGGATGCCAAGAATCATGGCTGTTTCTTCAATGCTAATGCCAATGCCATAACCAAAGACATCCAACAGATAGTTCCACTACTGGATTATTTCAACTCCAATGATGAAGGAAGAAGCTTGGAGATAATGGAGGGAAAGAACGTAGAAGATCATGAATCCAAGGCCAAGAGGCTGCTGCAGTTGTTGTGGCAAGATTAACTTCATAAAAAATGGAGATGGAGGTATTCTTAAATGCTTATATCCCTAAAAATGACTTCAACACTTCTATTTATGAATTTCATGAGAATTTCATGAAGCCACTGGGCTGATTTTAAATTGCTAGGATGATCAACCTGCTGGGGAAGGTAACATTAATCTTGTTTTGTTTACATTTGAACTACTCAAATTTCTATCACATAAAAATTATCATTCATGAACATAATAAAGTGGATTTTAAAGATGTAGAAAATGACTTTTGTTTAGTGTTTGATTGAACG

Coding sequence (CDS)

ATGTTCGATTCGTATTCTTTCATAAACATAAATGGTGCACGAGAAGAAAAGGATGAAATTGGACACAGTTTGAAAAACATGGTAGAGGTTGATGTTGTGCTCAAAATTGTTCATTCTTTGTCTCAAGCATGTGTTGACTCAAAAGGAAAGATGAGCATTGGTGTAGTGTCCCCATATTCAGCTCAAGTCGTTACCATTCAACGCAAAATTGGGAAGAAGTACAATTGTAATGGATTTAATGTGAAGGTGAGTTCAGTTGATGGCTTTCAAGGAGGGGTGGAAGATATCATTATTATTTCCACTGTTTGGTGTAATACAGGATCGTCCATCGGGTTTTTGTCGAGTAATCAAAGAACAAATGTCGCACTTACAAGAGCTAGAGTAGGTACTGTTTGTGGATATTGGGAAACATCAAAACACTGTCAAAGAGTAACTCGGTTTGGGAAGAGTTGGTTATGGATGCCAAGAATCATGGCTGTTTCTTCAATGCTAATGCCAATGCCATAA

Protein sequence

MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARVGTVCGYWETSKHCQRVTRFGKSWLWMPRIMAVSSMLMPMP*

Homology

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BLAST of CsGy1G018770 vs. ExPASy Swiss-Prot
Match: O94387 (Uncharacterized ATP-dependent helicase C29A10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC29A10.10c PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.2e-12
Identity = 47/124 (37.90%), Postives = 69/124 (55.65%), Query Frame = 0


Query: 5    YSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQVV 64
            Y F N++G   E      SL N+ E   +L +   L Q  ++   +  IGVV+PY +QV 
Sbjct: 1625 YRFFNVHGT--EAFSNSKSLYNVEEASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQ 1684

Query: 65   TIQRKIGKKYNCNGF-NVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVAL 124
             ++ +  +KY    F ++ + +VDGFQG  +DIII S V  +    IGFL   +R NVAL
Sbjct: 1685 QLRSQFQRKYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVAL 1744

Query: 125  TRAR 128
            TRA+
Sbjct: 1745 TRAK 1746

[Close]

BLAST of CsGy1G018770 vs. ExPASy Swiss-Prot
Match: B6SFA4 (Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana OX=3702 GN=MAA3 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.2e-11
Identity = 43/128 (33.59%), Postives = 69/128 (53.91%), Query Frame = 0


Query: 2   FDSYSFININGAREEKDE-IGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 61
           F  + F +I+  +E +      S  N+ EV+ VL I H L     + K    + ++SPY+
Sbjct: 595 FGPFCFFDIHEGKESQHPGATGSRVNLDEVEFVLLIYHRLVTMYPELKSSSQLAIISPYN 654

Query: 62  AQVVTIQRKIGKKYNCNGFN-VKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRT 121
            QV T + +  + +       V +++VDGFQG  +D+ I S V  N    IGFLS+++R 
Sbjct: 655 YQVKTFKDRFKEMFGTEAEKVVDINTVDGFQGREKDVAIFSCVRANENGQIGFLSNSRRM 714

Query: 122 NVALTRAR 128
           NV +TRA+
Sbjct: 715 NVGITRAK 722

[Close]

BLAST of CsGy1G018770 vs. ExPASy Swiss-Prot
Match: Q00416 (Helicase SEN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SEN1 PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 8.0e-11
Identity = 45/128 (35.16%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 5    YSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQAC---VDSKGKMSIGVVSPYSA 64
            Y F +I   R+E++    S  NM E+ V +++V  L +     +D  GK  IG++SPY  
Sbjct: 1697 YKFFDIISGRQEQNAKTMSYTNMEEIRVAIELVDYLFRKFDNKIDFTGK--IGIISPYRE 1756

Query: 65   QVVTIQRKIGKKY-NCNGFNVKVSSVDGFQGGVEDIIIISTVWC-NTGSSIGFLSSNQRT 124
            Q+  ++++  + +      ++  +++DGFQG  ++II+IS V   +T SS+GFL   +R 
Sbjct: 1757 QMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSVGFLKDFRRM 1816

Query: 125  NVALTRAR 128
            NVALTRA+
Sbjct: 1817 NVALTRAK 1822

[Close]

BLAST of CsGy1G018770 vs. ExPASy Swiss-Prot
Match: P34243 (DNA polymerase alpha-associated DNA helicase A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HCS1 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.8e-10
Identity = 46/127 (36.22%), Postives = 71/127 (55.91%), Query Frame = 0


Query: 26  NMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSS 85
           N  E+ +V + + +L    V      SIGV+SPY+AQV  +++ I  +      ++++S+
Sbjct: 545 NEGEIAIVKEHIENLRSFNVPEN---SIGVISPYNAQVSHLKKLIHDELKLT--DIEIST 604

Query: 86  VDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTNVALTRARVG-TVCGYWETSKHCQRV 145
           VDGFQG  +D+II+S V  N    +GFL   +R NVA+TR R    V G  E  + C   
Sbjct: 605 VDGFQGREKDVIILSLVRSNEKFEVGFLKEERRLNVAMTRPRRQLVVVGNIEVLQRCG-- 664

Query: 146 TRFGKSW 152
            ++ KSW
Sbjct: 665 NKYLKSW 664

[Close]

BLAST of CsGy1G018770 vs. ExPASy Swiss-Prot
Match: Q92355 (Helicase sen1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=sen1 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-10
Identity = 48/140 (34.29%), Postives = 72/140 (51.43%), Query Frame = 0


Query: 2    FDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYSA 61
            F  Y   ++ G  +E+     S  N+ EV+ ++ +V  L     D      IGV++PY +
Sbjct: 1484 FTQYRLFDVRG--KERTSNTMSTYNLEEVEYLVNMVDELLNKFPDVNFTGRIGVITPYRS 1543

Query: 62   QVVTIQRKIGKKYNCNGFN-VKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTN 121
            Q+  ++R    KY  +  + + + +VDGFQG  +DII  S V   +   IGFL   +R N
Sbjct: 1544 QLHELRRAFKVKYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVKSYSKHGIGFLRDFRRLN 1603

Query: 122  VALTRARVG-TVCGYWETSK 140
            VALTRAR    + G  ET K
Sbjct: 1604 VALTRARSSLLIIGNMETLK 1621

[Close]

BLAST of CsGy1G018770 vs. NCBI nr
Match: XP_031737586.1 (probable helicase MAGATAMA 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 341 bits (874), Expect = 2.00e-117
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 60
           MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS
Sbjct: 50  MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 109

Query: 61  AQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTN 120
           AQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTN
Sbjct: 110 AQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTN 169

Query: 121 VALTRARVGTVCGYWETSKHCQRVTRFGKSWLWMPRIMAVSSMLMPMP 168
           VALTRARVGTVCGYWETSKHCQRVTRFGKSWLWMPRIMAVSSMLMPMP
Sbjct: 170 VALTRARVGTVCGYWETSKHCQRVTRFGKSWLWMPRIMAVSSMLMPMP 217

[Close]

BLAST of CsGy1G018770 vs. NCBI nr
Match: KAE8645718.1 (hypothetical protein Csa_020459 [Cucumis sativus])

HSP 1 Score: 311 bits (798), Expect = 6.20e-106
Identity = 157/168 (93.45%), Postives = 159/168 (94.64%), Query Frame = 0


Query: 1   MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 60
           MF SYSFININGAREEKDEIGHSLKNMVEVDV+LKIVHSLSQACVDSKGKMSIGVVSPYS
Sbjct: 50  MFGSYSFININGAREEKDEIGHSLKNMVEVDVMLKIVHSLSQACVDSKGKMSIGVVSPYS 109

Query: 61  AQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTN 120
           AQVVTIQ KIGKKYNCNGFNVKVSSVDGFQGG EDIIIISTVWCNTGSSIGFLSSNQRTN
Sbjct: 110 AQVVTIQHKIGKKYNCNGFNVKVSSVDGFQGGEEDIIIISTVWCNTGSSIGFLSSNQRTN 169

Query: 121 VALTRARVGTVCGYWETSKHCQRVTRFGKSWLWMPRIMAVSSMLMPMP 168
           VALTRAR      YWETSKHCQRVTRFGKSWLWMPRI+AVSSMLMPMP
Sbjct: 170 VALTRAR------YWETSKHCQRVTRFGKSWLWMPRIVAVSSMLMPMP 211

[Close]

BLAST of CsGy1G018770 vs. NCBI nr
Match: XP_031737582.1 (uncharacterized ATP-dependent helicase C29A10.10c isoform X1 [Cucumis sativus])

HSP 1 Score: 253 bits (645), Expect = 7.04e-82
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0


Query: 1   MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 60
           MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS
Sbjct: 50  MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 109

Query: 61  AQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTN 120
           AQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTN
Sbjct: 110 AQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTN 169

Query: 121 VALTRAR 127
           VALTRAR
Sbjct: 170 VALTRAR 176

[Close]

BLAST of CsGy1G018770 vs. NCBI nr
Match: KAE8653090.1 (hypothetical protein Csa_019804 [Cucumis sativus])

HSP 1 Score: 235 bits (599), Expect = 4.22e-76
Identity = 125/168 (74.40%), Postives = 132/168 (78.57%), Query Frame = 0


Query: 1   MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 60
           MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS
Sbjct: 38  MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 97

Query: 61  AQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTN 120
           AQVVTIQRKIGKKYNCNGFNVK     GF   +++                     Q ++
Sbjct: 98  AQVVTIQRKIGKKYNCNGFNVK-DRPSGFCRVIKE---------------------QMSH 157

Query: 121 VALTRARVGTVCGYWETSKHCQRVTRFGKSWLWMPRIMAVSSMLMPMP 168
           +      +GTVCGYWETSKHCQRVTRFGKSWLWMPRIMAVSSMLMPMP
Sbjct: 158 LQ----ELGTVCGYWETSKHCQRVTRFGKSWLWMPRIMAVSSMLMPMP 179

[Close]

BLAST of CsGy1G018770 vs. NCBI nr
Match: XP_031736106.1 (helicase sen1 isoform X3 [Cucumis sativus] >KAE8653666.1 hypothetical protein Csa_007501 [Cucumis sativus])

HSP 1 Score: 236 bits (603), Expect = 1.84e-75
Identity = 122/127 (96.06%), Postives = 122/127 (96.06%), Query Frame = 0


Query: 1   MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 60
           MF SYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS
Sbjct: 50  MFGSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 109

Query: 61  AQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRTN 120
           AQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGG EDIIIISTV CNTGSSI FL SNQRTN
Sbjct: 110 AQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGEEDIIIISTVPCNTGSSIWFLLSNQRTN 169

Query: 121 VALTRAR 127
           VALTRAR
Sbjct: 170 VALTRAR 176

[Close]

BLAST of CsGy1G018770 vs. ExPASy TrEMBL
Match: A0A6J1CTS8 (LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like OS=Momordica charantia OX=3673 GN=LOC111014153 PE=3 SV=1)

HSP 1 Score: 184 bits (467), Expect = 3.62e-51
Identity = 98/129 (75.97%), Postives = 109/129 (84.50%), Query Frame = 0


Query: 1   MFDSYSFININGAREEK-DEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPY 60
           MF SYSFI+IN  REEK D +GHS +NM EV +VLKI+H+LS+ACV SK K+SIGVVSPY
Sbjct: 418 MFGSYSFIDINHGREEKRDGMGHSWRNMAEVHIVLKILHTLSKACVRSKEKISIGVVSPY 477

Query: 61  SAQVVTIQRKIGKKYN-CNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQR 120
           SAQV  IQ K+G+KYN C GF VKVSSVDGFQGG EDIIIISTV  N+GSSIGFLSSNQR
Sbjct: 478 SAQVAAIQHKVGRKYNNCGGFTVKVSSVDGFQGGEEDIIIISTVRSNSGSSIGFLSSNQR 537

Query: 121 TNVALTRAR 127
            NVALTRAR
Sbjct: 538 ANVALTRAR 546

[Close]

BLAST of CsGy1G018770 vs. ExPASy TrEMBL
Match: A0A5B7AXI3 (Putative helicase MAGATAMA 3 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_030858 PE=4 SV=1)

HSP 1 Score: 165 bits (417), Expect = 3.10e-48
Identity = 89/128 (69.53%), Postives = 103/128 (80.47%), Query Frame = 0


Query: 1   MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 60
           MF  YSFINI G +EE  ++GHS +N+VE+ VVLKIVH+L +A   SK K+SIGVVSPY+
Sbjct: 56  MFGPYSFINIVGGKEELADVGHSRRNLVELAVVLKIVHNLYKAWNGSKKKLSIGVVSPYA 115

Query: 61  AQVVTIQRKIGKKY-NCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRT 120
           AQVVTIQ K+GKKY N + F VKV S+DGFQGG EDIIIISTV  NTG  +GFLSS QRT
Sbjct: 116 AQVVTIQDKLGKKYENLDKFIVKVKSIDGFQGGEEDIIIISTVRANTGGFVGFLSSPQRT 175

Query: 121 NVALTRAR 127
           NVALTRAR
Sbjct: 176 NVALTRAR 183

[Close]

BLAST of CsGy1G018770 vs. ExPASy TrEMBL
Match: A0A0A0LU39 (AAA_12 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G325370 PE=4 SV=1)

HSP 1 Score: 155 bits (392), Expect = 2.47e-46
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 51  MSIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSI 110
           MSIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSI
Sbjct: 1   MSIGVVSPYSAQVVTIQRKIGKKYNCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSI 60

Query: 111 GFLSSNQRTNVALTRAR 127
           GFLSSNQRTNVALTRAR
Sbjct: 61  GFLSSNQRTNVALTRAR 77

[Close]

BLAST of CsGy1G018770 vs. ExPASy TrEMBL
Match: A0A5D3CGE7 (Regulator of nonsense transcripts 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5463G00100 PE=4 SV=1)

HSP 1 Score: 166 bits (420), Expect = 4.28e-46
Identity = 92/131 (70.23%), Postives = 102/131 (77.86%), Query Frame = 0


Query: 1   MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSL---SQACVDSKGKMSIGVVS 60
           MF SYSF++IN  REEKD I  S KNM EVDVVL+I+H L   +  CVDS  K+SIGVVS
Sbjct: 218 MFGSYSFMDINEGREEKDGITQSWKNMAEVDVVLQIIHKLYNKATTCVDSNEKISIGVVS 277

Query: 61  PYSAQVVTIQRKIGKKYN-CNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSN 120
           PYSAQV  I+ K+G+ YN  N F V+VSSVDGFQGG EDIIIISTV  N  SSIGFLSSN
Sbjct: 278 PYSAQVAAIEYKLGRNYNNSNIFKVRVSSVDGFQGGEEDIIIISTVRSNRSSSIGFLSSN 337

Query: 121 QRTNVALTRAR 127
           QRTNVALTRAR
Sbjct: 338 QRTNVALTRAR 348

[Close]

BLAST of CsGy1G018770 vs. ExPASy TrEMBL
Match: A0A6J1CRP9 (uncharacterized protein LOC111014151 OS=Momordica charantia OX=3673 GN=LOC111014151 PE=4 SV=1)

HSP 1 Score: 169 bits (427), Expect = 3.34e-45
Identity = 91/128 (71.09%), Postives = 101/128 (78.91%), Query Frame = 0


Query: 1   MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 60
           MF  YSFINI   REEKD+IGHS KNM+EV V LKIV +L +    SK K+SIGV+SPYS
Sbjct: 683 MFGPYSFINIKYGREEKDDIGHSRKNMLEVAVALKIVRNLYKVWTSSKEKLSIGVISPYS 742

Query: 61  AQVVTIQRKIGKKY-NCNGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRT 120
           AQV TI+ KIG KY N +GF VKV SVDGFQGG EDIIIISTV  N GSS+GFLS +QRT
Sbjct: 743 AQVSTIKEKIGHKYDNLDGFKVKVKSVDGFQGGEEDIIIISTVRSNRGSSVGFLSCDQRT 802

Query: 121 NVALTRAR 127
           NVALTRAR
Sbjct: 803 NVALTRAR 810

[Close]

BLAST of CsGy1G018770 vs. TAIR 10
Match: AT4G05540.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 132.1 bits (331), Expect = 4.2e-31
Identity = 75/130 (57.69%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 1   MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 60
           MF S+SFIN+   +EE  + GHS KNMVE+ VV +I+ +L +   ++K KMS+GV+SPY 
Sbjct: 543 MFGSFSFINVGLGKEEFGD-GHSPKNMVEIAVVSEILTNLLKVSSETKTKMSVGVISPYK 602

Query: 61  AQVVTIQRKIGKKYNC---NGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQ 120
           AQV  IQ +IG KY     N F + V SVDGFQGG EDIIIISTV  N   +IGFLS+ Q
Sbjct: 603 AQVSAIQERIGDKYTSVSDNLFTLNVRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQ 662

Query: 121 RTNVALTRAR 128
           R NVALTRAR
Sbjct: 663 RANVALTRAR 671

[Close]

BLAST of CsGy1G018770 vs. TAIR 10
Match: AT5G37160.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 131.7 bits (330), Expect = 5.4e-31
Identity = 71/131 (54.20%), Postives = 89/131 (67.94%), Query Frame = 0


Query: 1   MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 60
           MF ++SFIN+   +EE  + GHS KNMVEV V+ KI+ +L +     K KMS+GV+SPY 
Sbjct: 672 MFGTFSFINVGRGKEEFGD-GHSPKNMVEVAVISKIISNLFKVSSQRKQKMSVGVISPYK 731

Query: 61  AQVVTIQRKIGKKYNCNG----FNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSN 120
            QV  IQ ++G KYN       F + V SVDGFQGG  D+IIISTV CN   ++GFLS+ 
Sbjct: 732 GQVRAIQERVGDKYNSLSVDQLFTLNVQSVDGFQGGEVDVIIISTVRCNVNGNVGFLSNR 791

Query: 121 QRTNVALTRAR 128
           QR NVALTRAR
Sbjct: 792 QRANVALTRAR 801

[Close]

BLAST of CsGy1G018770 vs. TAIR 10
Match: AT1G65810.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 7.1e-31
Identity = 76/128 (59.38%), Postives = 89/128 (69.53%), Query Frame = 0


Query: 1   MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 60
           M+  YSFINI   RE+  E G+S KN+VEV VV +IV  L      +   +S+GV+SPY 
Sbjct: 665 MYGPYSFINIAYGREQFGE-GYSSKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYK 724

Query: 61  AQVVTIQRKIGKKYNCNG-FNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRT 120
           AQV  IQ +IG+KYN  G F V V SVDGFQGG EDIIIISTV  N   +IGFLS+ QRT
Sbjct: 725 AQVFAIQERIGEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRT 784

Query: 121 NVALTRAR 128
           NVALTRAR
Sbjct: 785 NVALTRAR 791

[Close]

BLAST of CsGy1G018770 vs. TAIR 10
Match: AT1G65810.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 7.1e-31
Identity = 76/128 (59.38%), Postives = 89/128 (69.53%), Query Frame = 0


Query: 1   MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 60
           M+  YSFINI   RE+  E G+S KN+VEV VV +IV  L      +   +S+GV+SPY 
Sbjct: 665 MYGPYSFINIAYGREQFGE-GYSSKNLVEVSVVAEIVSKLYSVSRKTGRTISVGVISPYK 724

Query: 61  AQVVTIQRKIGKKYNCNG-FNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQRT 120
           AQV  IQ +IG+KYN  G F V V SVDGFQGG EDIIIISTV  N   +IGFLS+ QRT
Sbjct: 725 AQVFAIQERIGEKYNTEGTFTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRT 784

Query: 121 NVALTRAR 128
           NVALTRAR
Sbjct: 785 NVALTRAR 791

[Close]

BLAST of CsGy1G018770 vs. TAIR 10
Match: AT5G52090.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 128.3 bits (321), Expect = 6.0e-30
Identity = 71/130 (54.62%), Postives = 90/130 (69.23%), Query Frame = 0


Query: 1   MFDSYSFININGAREEKDEIGHSLKNMVEVDVVLKIVHSLSQACVDSKGKMSIGVVSPYS 60
           MFDS+SFIN+   +EE  + GHS KNMVEV V+ +I+ +L +   + + K+S+GVVSPY 
Sbjct: 476 MFDSFSFINVGRGKEEFGD-GHSPKNMVEVAVISEIISNLYKVSCERRMKVSVGVVSPYK 535

Query: 61  AQVVTIQRKIGKKYNC---NGFNVKVSSVDGFQGGVEDIIIISTVWCNTGSSIGFLSSNQ 120
            Q+  IQ KIG KY+      F + V SVDGFQGG EDIIIISTV  N    +GFL++ Q
Sbjct: 536 GQMRAIQEKIGDKYSSLSGQQFTLNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQ 595

Query: 121 RTNVALTRAR 128
           R NVALTRAR
Sbjct: 596 RANVALTRAR 604

The following BLAST results are available for this feature:

BLAST of CsGy1G018770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O94387	3.2e-12	37.90	Uncharacterized ATP-dependent helicase C29A10.10c OS=Schizosaccharomyces pombe (...	[more]
B6SFA4	1.2e-11	33.59	Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana OX=3702 GN=MAA3 PE=2 SV=1	[more]
Q00416	8.0e-11	35.16	Helicase SEN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292...	[more]
P34243	1.8e-10	36.22	DNA polymerase alpha-associated DNA helicase A OS=Saccharomyces cerevisiae (stra...	[more]
Q92355	2.3e-10	34.29	Helicase sen1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 G...	[more]

BLAST of CsGy1G018770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737586.1	2.00e-117	100.00	probable helicase MAGATAMA 3 isoform X2 [Cucumis sativus]	[more]
KAE8645718.1	6.20e-106	93.45	hypothetical protein Csa_020459 [Cucumis sativus]	[more]
XP_031737582.1	7.04e-82	100.00	uncharacterized ATP-dependent helicase C29A10.10c isoform X1 [Cucumis sativus]	[more]
KAE8653090.1	4.22e-76	74.40	hypothetical protein Csa_019804 [Cucumis sativus]	[more]
XP_031736106.1	1.84e-75	96.06	helicase sen1 isoform X3 [Cucumis sativus] >KAE8653666.1 hypothetical protein Cs...	[more]

BLAST of CsGy1G018770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTS8	3.62e-51	75.97	LOW QUALITY PROTEIN: ATP-dependent helicase NAM7-like OS=Momordica charantia OX=...	[more]
A0A5B7AXI3	3.10e-48	69.53	Putative helicase MAGATAMA 3 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_0...	[more]
A0A0A0LU39	2.47e-46	100.00	AAA_12 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G325370 PE=4...	[more]
A0A5D3CGE7	4.28e-46	70.23	Regulator of nonsense transcripts 1-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1CRP9	3.34e-45	71.09	uncharacterized protein LOC111014151 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]

BLAST of CsGy1G018770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05540.1	4.2e-31	57.69	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G37160.1	5.4e-31	54.20	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G65810.1	7.1e-31	59.38	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT1G65810.2	7.1e-31	59.38	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G52090.1	6.0e-30	54.62	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..151 e-value: 7.9E-34 score: 118.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 5..136
IPR041679	DNA2/NAM7 helicase-like, C-terminal	PFAM	PF13087	AAA_12	coord: 4..128 e-value: 4.7E-31 score: 108.0
IPR041679	DNA2/NAM7 helicase-like, C-terminal	CDD	cd18808	SF1_C_Upf1	coord: 1..127 e-value: 7.67024E-36 score: 121.187
IPR045055	DNA2/NAM7-like helicase	PANTHER	PTHR10887	DNA2/NAM7 HELICASE FAMILY	coord: 2..128
None	No IPR available	PANTHER	PTHR10887:SF474	OS04G0582700 PROTEIN	coord: 2..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G018770.2	CsGy1G018770.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007015	actin filament organization
biological_process	GO:0009860	pollen tube growth
biological_process	GO:0030050	vesicle transport along actin filament
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016459	myosin complex
cellular_component	GO:0031982	vesicle
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0000146	microfilament motor activity