CsGy1G010655 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy1G010655
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr1: 6716420 .. 6716883 (-)
RNA-Seq Expression	CsGy1G010655
Synteny	CsGy1G010655

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTAACTGAACTTCCTACCATTTTTGTTTAGGAGTTCCTCTGTTTTTGAAAGGCTCTGTTTTAGCAGAGGAAAAACATGAGTGTTTTAATGACAGTAAGGAGAAATGGTGGTTATTCGAAGATGGAGAAGGAAGACCCAGATGAGAAAAAGCATAGACAAGCTCAGTTCTTGATTTACAAGATAATGGAGCAAGCAAGTAATGGCAGTAAGAGAAGACCTTCATGTCTAAGAATCAGAATAAGGAAGTTTAAGTTGAGGATGGGAAGAAGGTGGAAGAAGATGAAGAAGACAATGGCAATGAGTTTTTCAACGGCAAGAATTGGGATTTGCAACCAATTTGGACAGCTTAGAAGTTGTAAAAGTTTGTTTGGAAAAACAAAGGTGGAAACTTTGAACTTTCCTACTGCTTTGGTTGCTTGAGTTGATTAGGATTTTATTCTTTATGTTTGTATTCTTCTCTTT

mRNA sequence

TTCTAACTGAACTTCCTACCATTTTTGTTTAGGAGTTCCTCTGTTTTTGAAAGGCTCTGTTTTAGCAGAGGAAAAACATGAGTGTTTTAATGACAGTAAGGAGAAATGGTGGTTATTCGAAGATGGAGAAGGAAGACCCAGATGAGAAAAAGCATAGACAAGCTCAGTTCTTGATTTACAAGATAATGGAGCAAGCAAGTAATGGCAGTAAGAGAAGACCTTCATGTCTAAGAATCAGAATAAGGAAGTTTAAGTTGAGGATGGGAAGAAGGTGGAAGAAGATGAAGAAGACAATGGCAATGAGTTTTTCAACGGCAAGAATTGGGATTTGCAACCAATTTGGACAGCTTAGAAGTTGTAAAAGTTTGTTTGGAAAAACAAAGGTGGAAACTTTGAACTTTCCTACTGCTTTGGTTGCTTGAGTTGATTAGGATTTTATTCTTTATGTTTGTATTCTTCTCTTT

Coding sequence (CDS)

ATGAGTGTTTTAATGACAGTAAGGAGAAATGGTGGTTATTCGAAGATGGAGAAGGAAGACCCAGATGAGAAAAAGCATAGACAAGCTCAGTTCTTGATTTACAAGATAATGGAGCAAGCAAGTAATGGCAGTAAGAGAAGACCTTCATGTCTAAGAATCAGAATAAGGAAGTTTAAGTTGAGGATGGGAAGAAGGTGGAAGAAGATGAAGAAGACAATGGCAATGAGTTTTTCAACGGCAAGAATTGGGATTTGCAACCAATTTGGACAGCTTAGAAGTTGTAAAAGTTTGTTTGGAAAAACAAAGGTGGAAACTTTGAACTTTCCTACTGCTTTGGTTGCTTGA

Protein sequence

MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKLRMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTKVETLNFPTALVA*

Homology

[Close]

BLAST of CsGy1G010655 vs. NCBI nr
Match: KGN64527.1 (hypothetical protein Csa_013452 [Cucumis sativus])

HSP 1 Score: 224 bits (572), Expect = 7.21e-74
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL
Sbjct: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60

Query: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTKVETLNFPTALVA 114
           RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTKVETLNFPTALVA
Sbjct: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTKVETLNFPTALVA 114

[Close]

BLAST of CsGy1G010655 vs. NCBI nr
Match: KAG6584084.1 (hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 163 bits (412), Expect = 1.69e-49
Identity = 84/110 (76.36%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           MS L+T R+NG YS+MEKEDP+EKKHRQAQFLIYKIMEQA++GS+RR SCLRIRIRKFKL
Sbjct: 1   MSGLVTRRQNG-YSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKL 60

Query: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTKVETLNFPT 110
           R+GRR KK+KKTM+M   TARIGIC QFGQLR+CKSLFG+ K E L FP+
Sbjct: 61  RIGRRLKKLKKTMSMGICTARIGICKQFGQLRTCKSLFGRAKEEALAFPS 109

[Close]

BLAST of CsGy1G010655 vs. NCBI nr
Match: XP_023001322.1 (uncharacterized protein LOC111495486 [Cucurbita maxima])

HSP 1 Score: 161 bits (407), Expect = 9.76e-49
Identity = 83/110 (75.45%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           MS L+T R+NG YS+MEKEDP+EKKHRQAQFLIYKIMEQA++G++RR SCLRIRIRKFKL
Sbjct: 1   MSGLVTRRQNG-YSRMEKEDPEEKKHRQAQFLIYKIMEQANSGTRRRSSCLRIRIRKFKL 60

Query: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTKVETLNFPT 110
           R+GRR KK+KKTM+M F TAR GIC QFGQLR+CKSLFG+ K E L FP+
Sbjct: 61  RIGRRLKKLKKTMSMGFCTARNGICKQFGQLRTCKSLFGRPKEEALAFPS 109

[Close]

BLAST of CsGy1G010655 vs. NCBI nr
Match: KAG7019685.1 (hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 160 bits (405), Expect = 1.97e-48
Identity = 83/110 (75.45%), Postives = 96/110 (87.27%), Query Frame = 0


Query: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           MS L+T R+NG YS+MEKEDP+EKKHRQAQFLIYKIMEQA++GS+RR SCLRIRIRKFKL
Sbjct: 1   MSGLVTRRQNG-YSRMEKEDPEEKKHRQAQFLIYKIMEQANSGSRRRSSCLRIRIRKFKL 60

Query: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTKVETLNFPT 110
           R+GRR KK+KKTM+M   TAR GIC QFGQLR+CKSLFG+ K E L FP+
Sbjct: 61  RIGRRLKKLKKTMSMGICTARNGICKQFGQLRTCKSLFGRAKEEALAFPS 109

[Close]

BLAST of CsGy1G010655 vs. NCBI nr
Match: XP_022140046.1 (uncharacterized protein LOC111010796 [Momordica charantia])

HSP 1 Score: 160 bits (405), Expect = 2.03e-48
Identity = 82/111 (73.87%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           MSV++T R+  GYS+MEKEDP+EKKHR+AQFLIYKIMEQA++GS+RRP+CLRIRIRKFKL
Sbjct: 1   MSVILT-RKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKL 60

Query: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGK-TKVETLNFPT 110
           R+GRR KK++K+M+ S STARIGIC Q GQLR+CKSLFG+  KVETL FP+
Sbjct: 61  RIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPS 110

[Close]

BLAST of CsGy1G010655 vs. ExPASy TrEMBL
Match: A0A0A0LUT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063510 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 3.49e-74
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL
Sbjct: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60

Query: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTKVETLNFPTALVA 114
           RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTKVETLNFPTALVA
Sbjct: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTKVETLNFPTALVA 114

[Close]

BLAST of CsGy1G010655 vs. ExPASy TrEMBL
Match: A0A6J1KG77 (uncharacterized protein LOC111495486 OS=Cucurbita maxima OX=3661 GN=LOC111495486 PE=4 SV=1)

HSP 1 Score: 161 bits (407), Expect = 4.73e-49
Identity = 83/110 (75.45%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           MS L+T R+NG YS+MEKEDP+EKKHRQAQFLIYKIMEQA++G++RR SCLRIRIRKFKL
Sbjct: 1   MSGLVTRRQNG-YSRMEKEDPEEKKHRQAQFLIYKIMEQANSGTRRRSSCLRIRIRKFKL 60

Query: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTKVETLNFPT 110
           R+GRR KK+KKTM+M F TAR GIC QFGQLR+CKSLFG+ K E L FP+
Sbjct: 61  RIGRRLKKLKKTMSMGFCTARNGICKQFGQLRTCKSLFGRPKEEALAFPS 109

[Close]

BLAST of CsGy1G010655 vs. ExPASy TrEMBL
Match: A0A6J1CEK3 (uncharacterized protein LOC111010796 OS=Momordica charantia OX=3673 GN=LOC111010796 PE=4 SV=1)

HSP 1 Score: 160 bits (405), Expect = 9.84e-49
Identity = 82/111 (73.87%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           MSV++T R+  GYS+MEKEDP+EKKHR+AQFLIYKIMEQA++GS+RRP+CLRIRIRKFKL
Sbjct: 1   MSVILT-RKQSGYSRMEKEDPEEKKHREAQFLIYKIMEQANSGSRRRPTCLRIRIRKFKL 60

Query: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGK-TKVETLNFPT 110
           R+GRR KK++K+M+ S STARIGIC Q GQLR+CKSLFG+  KVETL FP+
Sbjct: 61  RIGRRLKKLRKSMSASLSTARIGICKQIGQLRTCKSLFGRGRKVETLAFPS 110

[Close]

BLAST of CsGy1G010655 vs. ExPASy TrEMBL
Match: A0A5A7UTN2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005820 PE=4 SV=1)

HSP 1 Score: 128 bits (321), Expect = 2.15e-36
Identity = 70/114 (61.40%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 1   MSVLMTVRRNGGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKL 60
           M +LMTVR+NGGYS+MEKEDPDEKKHRQAQFLIYKIMEQASNG+                
Sbjct: 1   MGLLMTVRKNGGYSRMEKEDPDEKKHRQAQFLIYKIMEQASNGT---------------- 60

Query: 61  RMGRRWKKMKKTMAMSFSTARIGICNQFGQLRSCKSLFGKTKVETLNFPTALVA 114
                               RIGIC+Q GQLRSCKSLFGK KVETLNFPTALVA
Sbjct: 61  --------------------RIGICSQLGQLRSCKSLFGKAKVETLNFPTALVA 78

[Close]

BLAST of CsGy1G010655 vs. ExPASy TrEMBL
Match: A0A540M3N5 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_021032 PE=4 SV=1)

HSP 1 Score: 106 bits (265), Expect = 1.97e-27
Identity = 57/107 (53.27%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 3   VLMTVRRN-GGYSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRPSCLRIRIRKFKLR 62
           + MT+R++ G YSKM+KEDP+E  HR+AQFLIYK+M+Q     +RRPS LRIR+RK KL+
Sbjct: 1   MAMTIRKSYGAYSKMDKEDPEEVNHRRAQFLIYKVMQQVE--MRRRPSNLRIRVRKLKLK 60

Query: 63  MGRRWKKMKKTMAMSFSTARIGICNQ-FGQLRSCKSLFGKTKVETLN 107
           +GRR KK++K+M +S S AR+ +  Q F QL++CK+LFG+     +N
Sbjct: 61  IGRRLKKLRKSMLLSISAARVCVYKQVFNQLKTCKTLFGRGDQGNIN 105

[Close]

BLAST of CsGy1G010655 vs. TAIR 10
Match: AT1G11655.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 4.9e-07
Identity = 32/90 (35.56%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 13 YSKMEKEDPDEKKHRQAQFLIYKIMEQASNGSKRRP--SCLRIRIRKFKLRMGRRWKKMK 72
          YSKM+KEDP+E   R+A+FLIYK +++A   S+R P  S +R+++   K+++G+R  K++
Sbjct: 10 YSKMDKEDPEEVLSRRAKFLIYKTLQEADLISRRDPHSSFIRLKLYLLKVKIGKRLAKLR 69

Query: 73 KTMAMSFSTARIGICNQFGQ--LRSCKSLF 99
          +++    S  R G   +     +R+ K +F
Sbjct: 70 RSVV---SAVRFGGIRKHSHNGVRALKKMF 96

[Close]

BLAST of CsGy1G010655 vs. TAIR 10
Match: AT4G04745.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G21902.1); Has 32 Blast hits to 32 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.8 bits (120), Expect = 8.3e-07
Identity = 29/67 (43.28%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 13  YSKMEKEDPDEKKHRQAQFLIYKIMEQASNGS-----KRRPS--CLRIRIRKFKLRMGRR 72
           Y+KMEKEDP E  HR+AQFLI K++E+A + +     +RR S   + IR+   ++R+G++
Sbjct: 37  YTKMEKEDPQELIHRRAQFLIQKVLERADSKTRQHQQRRRSSGPLIMIRVVGIRMRIGKK 96

[Close]

BLAST of CsGy1G010655 vs. TAIR 10
Match: AT4G21902.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G04745.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 40.8 bits (94), Expect = 8.6e-04
Identity = 23/70 (32.86%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 13 YSKMEKEDPDEKKHRQAQFLIYKIMEQAS----NGSKRRPSCLRI---RIRKFKLRMGRR 72
          Y+K+EKED +E  HR+AQFLI+KI+++A        ++R + +++   R+   ++++G++
Sbjct: 10 YTKIEKEDLNEIIHRRAQFLIHKILQRADIETLRQQQKRNTTIKLFSFRVVGIRMKIGKK 69

Query: 73 WKKMKKTMAM 76
           +K++K+  M
Sbjct: 70 LRKLRKSCVM 79

The following BLAST results are available for this feature:

BLAST of CsGy1G010655 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy1G010655 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN64527.1	7.21e-74	100.00	hypothetical protein Csa_013452 [Cucumis sativus]	[more]
KAG6584084.1	1.69e-49	76.36	hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023001322.1	9.76e-49	75.45	uncharacterized protein LOC111495486 [Cucurbita maxima]	[more]
KAG7019685.1	1.97e-48	75.45	hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022140046.1	2.03e-48	73.87	uncharacterized protein LOC111010796 [Momordica charantia]	[more]

BLAST of CsGy1G010655 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUT4	3.49e-74	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G063510 PE=4 SV=1	[more]
A0A6J1KG77	4.73e-49	75.45	uncharacterized protein LOC111495486 OS=Cucurbita maxima OX=3661 GN=LOC111495486...	[more]
A0A6J1CEK3	9.84e-49	73.87	uncharacterized protein LOC111010796 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A5A7UTN2	2.15e-36	61.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A540M3N5	1.97e-27	53.27	Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_021032 PE=4 SV=1	[more]

BLAST of CsGy1G010655 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11655.1	4.9e-07	35.56	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G04745.1	8.3e-07	43.28	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G21902.1	8.6e-04	32.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR35687:SF1	OS07G0516700 PROTEIN	coord: 5..103
None	No IPR available	PANTHER	PTHR35687	OS07G0516700 PROTEIN	coord: 5..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G010655.1	CsGy1G010655.1	mRNA