CsGy1G000220 (gene) Cucumber (Gy14) v2.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCATTTCCTCCTCCTTCTTCCCTTCACCTTCTTCCCCCATTCCCATTCCTTTCCCTTCCCTTACCTTCTACTCTATTCTTCTCTCTCCAACCCTTCCCTTCCTCCCTCATTAACACCCTCTTCTTACTTCTATCTTAATGGCCGATATTCAACCCCCCGACCCCCAGATCAACGGCGCCCCTCCCCCTCTCGTCGTCTCCTCTGAAACCGTTGGATCCAAACGCCAGCGAAGGCCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTACGATTCTTACCCCCGCCGCACCAATAAACCCTGGAAGTTTTCCTTGGAAAATCGTAAGGACTCCTCCGCTGCCACTGCCAAGAACTCCAAAACTCGCCCTTTGACCAACTTCAGCTCGGCCGACGCCGAAGATAAAGAGAACAATTTGGACACCGTTGCAATTGGCAGTTGGAGATTAAAAGATTCCAAACGGAGAGGCTCCGCTGCCACCAAGAGGGCCAGAACTAATTGGGCATCCTCCAAGCACGACGAAGGCGGCGGAGGTGGGGAAGCAGATGATAAGTATAGCGCCGGCGAAGATGTGGATGAGGGGTACCGGGATTACGACATTGAAAACTCGGAAAGTCCTCTAAAAGAGCAAAGTTCAATGCATTCGCTTGAGAATTTGGCGATGGAAGGTCAGGGGAATGATAGGGAGATGCTTTATCAGGGGAATAGAAGATCTATAAGGTCTAGGGTTTCGGAGGGGAGAGACCACCAAGAGGGGCTCGAATTTTCAGGGCCTTCAGATACTGATGCTAGGAATTGGAAGTGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGGCTGTGTGGGGAAGATGGGGTTAGAGTTTGGCTCAACGGCTTAGGGTTAGGTCGGTATGCTCCAATTTTTGAAATTCACGAGGTGGACGATGAGGTTTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAAGTGCAGTTGGGTCGCGGAGAAAAATGTACTGCGCAATACAGAAGTTAGGGAAAGGATTTTCATGAGTTCTGATCTCAAGAAGATGTATCCAAAATTTCAGCCATGGCAATGTAAGCTGCTGCATGCCTGAATTAATCTTTGAGCATTTTTGCTGCTACATTTTCTCGTATTGGACATTGTAGGTTCTTTTGTTAGTCTTTCATATTTCTGATTTTAGCAACTTACATCTTCATCTTCTTCTATACTGCAATTTTCCCCACAAATCTTTTTTCATATCATTGTGAAATCTATATGGTGAAATAAGAGTACCGATAGTGCTTGCTACAAGATACAAAAGAACCAAAATAAACCATTTATTGCCGCATTCTGGGATTTGACTGAACTCATTCCACTGCCTCTACTATAGCGTTTGACCATTCTGATTTCACAGTAATGTTTCTTGGTCTTACATGGAAAGATTCTGAATTTTGTATTCTCCTCAAAATAGTACAACTACATTAGTCATCTGACAAAGTTTTTCCACTCTGGGAACTGGAAGCTGATGGTGTTAATTGTGGTCTTAAATGTGGTGGCTCTGCTCGTGGGTTTGTTTGCCAAGGAATGCTAGCCCCCCAAGGTAGTCTCCATTTCCCAGAGATACGAAGAAATTAGTTGAGCTACAATCTATACTTCATTTTGAAGATTCAGGCCAGTTTTTGGTTTGCTGAAGATTGAAACCCACTCCTTTGGGAAGATAGTTTCATTTCCCAAATACAAATTGTTGTAGTAACTAGATGTTTGTTTGAGTTGTTGAATCTCTTCAGTATTTTTTTGGTATGTAAACGCTGTGCGCGTCTCCCTCCCTCATTCCCCCCAAATTAGTAGAGGAGAGGGAATGTGGCACTCCCAAATTAATCGATCCCCTAATTCAGCATTTTGTTGGGAACTGAATTTGGCATTTCTGTTAATACAACCGTG CCATTTCCTCCTCCTTCTTCCCTTCACCTTCTTCCCCCATTCCCATTCCTTTCCCTTCCCTTACCTTCTACTCTATTCTTCTCTCTCCAACCCTTCCCTTCCTCCCTCATTAACACCCTCTTCTTACTTCTATCTTAATGGCCGATATTCAACCCCCCGACCCCCAGATCAACGGCGCCCCTCCCCCTCTCGTCGTCTCCTCTGAAACCGTTGGATCCAAACGCCAGCGAAGGCCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTACGATTCTTACCCCCGCCGCACCAATAAACCCTGGAAGTTTTCCTTGGAAAATCGTAAGGACTCCTCCGCTGCCACTGCCAAGAACTCCAAAACTCGCCCTTTGACCAACTTCAGCTCGGCCGACGCCGAAGATAAAGAGAACAATTTGGACACCGTTGCAATTGGCAGTTGGAGATTAAAAGATTCCAAACGGAGAGGCTCCGCTGCCACCAAGAGGGCCAGAACTAATTGGGCATCCTCCAAGCACGACGAAGGCGGCGGAGGTGGGGAAGCAGATGATAAGTATAGCGCCGGCGAAGATGTGGATGAGGGGTACCGGGATTACGACATTGAAAACTCGGAAAGTCCTCTAAAAGAGCAAAGTTCAATGCATTCGCTTGAGAATTTGGCGATGGAAGGTCAGGGGAATGATAGGGAGATGCTTTATCAGGGGAATAGAAGATCTATAAGGTCTAGGGTTTCGGAGGGGAGAGACCACCAAGAGGGGCTCGAATTTTCAGGGCCTTCAGATACTGATGCTAGGAATTGGAAGTGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGGCTGTGTGGGGAAGATGGGGTTAGAGTTTGGCTCAACGGCTTAGGGTTAGGTCGGTATGCTCCAATTTTTGAAATTCACGAGGTGGACGATGAGGTTTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAAGTGCAGTTGGGTCGCGGAGAAAAATGTACTGCGCAATACAGAAGTTAGGGAAAGGATTTTCATGAGTTCTGATCTCAAGAAGATGTATCCAAAATTTCAGCCATGGCAATTACAACTACATTAGTCATCTGACAAAGTTTTTCCACTCTGGGAACTGGAAGCTGATGGTGTTAATTGTGGTCTTAAATGTGGTGGCTCTGCTCGTGGGTTTGTTTGCCAAGGAATGCTAGCCCCCCAAGGTAGTCTCCATTTCCCAGAGATACGAAGAAATTAGTTGAGCTACAATCTATACTTCATTTTGAAGATTCAGGCCAGTTTTTGGTTTGCTGAAGATTGAAACCCACTCCTTTGGGAAGATAGTTTCATTTCCCAAATACAAATTGTTGTAGTAACTAGATGTTTGTTTGAGTTGTTGAATCTCTTCAGTATTTTTTTGGTATGTAAACGCTGTGCGCGTCTCCCTCCCTCATTCCCCCCAAATTAGTAGAGGAGAGGGAATGTGGCACTCCCAAATTAATCGATCCCCTAATTCAGCATTTTGTTGGGAACTGAATTTGGCATTTCTGTTAATACAACCGTG ATGGCCGATATTCAACCCCCCGACCCCCAGATCAACGGCGCCCCTCCCCCTCTCGTCGTCTCCTCTGAAACCGTTGGATCCAAACGCCAGCGAAGGCCCAGCGTCCGATTGGGGGATATCGGCGGCGACCAACCCTACGATTCTTACCCCCGCCGCACCAATAAACCCTGGAAGTTTTCCTTGGAAAATCGTAAGGACTCCTCCGCTGCCACTGCCAAGAACTCCAAAACTCGCCCTTTGACCAACTTCAGCTCGGCCGACGCCGAAGATAAAGAGAACAATTTGGACACCGTTGCAATTGGCAGTTGGAGATTAAAAGATTCCAAACGGAGAGGCTCCGCTGCCACCAAGAGGGCCAGAACTAATTGGGCATCCTCCAAGCACGACGAAGGCGGCGGAGGTGGGGAAGCAGATGATAAGTATAGCGCCGGCGAAGATGTGGATGAGGGGTACCGGGATTACGACATTGAAAACTCGGAAAGTCCTCTAAAAGAGCAAAGTTCAATGCATTCGCTTGAGAATTTGGCGATGGAAGGTCAGGGGAATGATAGGGAGATGCTTTATCAGGGGAATAGAAGATCTATAAGGTCTAGGGTTTCGGAGGGGAGAGACCACCAAGAGGGGCTCGAATTTTCAGGGCCTTCAGATACTGATGCTAGGAATTGGAAGTGCGGGACTAGCGGTGATAGGAATGGGAATGGTGGGAGAGGGCTGTGTGGGGAAGATGGGGTTAGAGTTTGGCTCAACGGCTTAGGGTTAGGTCGGTATGCTCCAATTTTTGAAATTCACGAGGTGGACGATGAGGTTTTGCCAATGTTGACACTCGAGGATCTCAAGGATATGGGAATAAGTGCAGTTGGGTCGCGGAGAAAAATGTACTGCGCAATACAGAAGTTAGGGAAAGGATTTTCATGA MADIQPPDPQINGAPPPLVVSSETVGSKRQRRPSVRLGDIGGDQPYDSYPRRTNKPWKFSLENRKDSSAATAKNSKTRPLTNFSSADAEDKENNLDTVAIGSWRLKDSKRRGSAATKRARTNWASSKHDEGGGGGEADDKYSAGEDVDEGYRDYDIENSESPLKEQSSMHSLENLAMEGQGNDREMLYQGNRRSIRSRVSEGRDHQEGLEFSGPSDTDARNWKCGTSGDRNGNGGRGLCGEDGVRVWLNGLGLGRYAPIFEIHEVDDEVLPMLTLEDLKDMGISAVGSRRKMYCAIQKLGKGFS* Homology
BLAST of CsGy1G000220 vs. ExPASy Swiss-Prot
Match: Q9IA00 (Protein bicaudal C homolog 1-A OS=Xenopus laevis OX=8355 GN=bicc1-a PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.6e-07 Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 0
BLAST of CsGy1G000220 vs. ExPASy Swiss-Prot
Match: Q99MQ1 (Protein bicaudal C homolog 1 OS=Mus musculus OX=10090 GN=Bicc1 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.8e-06 Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0
BLAST of CsGy1G000220 vs. ExPASy Swiss-Prot
Match: Q24009 (Protein bicaudal C OS=Drosophila melanogaster OX=7227 GN=BicC PE=1 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 1.8e-05 Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 0
BLAST of CsGy1G000220 vs. ExPASy Swiss-Prot
Match: Q68DC2 (Ankyrin repeat and SAM domain-containing protein 6 OS=Homo sapiens OX=9606 GN=ANKS6 PE=1 SV=2) HSP 1 Score: 50.1 bits (118), Expect = 5.3e-05 Identity = 30/76 (39.47%), Postives = 40/76 (52.63%), Query Frame = 0
BLAST of CsGy1G000220 vs. ExPASy Swiss-Prot
Match: Q6GQX6 (Ankyrin repeat and SAM domain-containing protein 6 OS=Mus musculus OX=10090 GN=Anks6 PE=1 SV=2) HSP 1 Score: 48.5 bits (114), Expect = 1.5e-04 Identity = 29/76 (38.16%), Postives = 40/76 (52.63%), Query Frame = 0
BLAST of CsGy1G000220 vs. NCBI nr
Match: XP_031738774.1 (uncharacterized protein LOC101208783 [Cucumis sativus] >KGN63447.1 hypothetical protein Csa_013418 [Cucumis sativus]) HSP 1 Score: 599 bits (1545), Expect = 6.21e-216 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of CsGy1G000220 vs. NCBI nr
Match: XP_008464381.1 (PREDICTED: uncharacterized protein LOC103502284 [Cucumis melo] >ADN33866.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0057739.1 Protein bicaudal C-1-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 595 bits (1534), Expect = 2.95e-214 Identity = 301/304 (99.01%), Postives = 303/304 (99.67%), Query Frame = 0
BLAST of CsGy1G000220 vs. NCBI nr
Match: XP_038879043.1 (uncharacterized protein LOC120071081 [Benincasa hispida]) HSP 1 Score: 557 bits (1435), Expect = 4.05e-199 Identity = 290/310 (93.55%), Postives = 297/310 (95.81%), Query Frame = 0
BLAST of CsGy1G000220 vs. NCBI nr
Match: XP_022134986.1 (uncharacterized protein LOC111007101 [Momordica charantia]) HSP 1 Score: 539 bits (1389), Expect = 5.16e-192 Identity = 282/316 (89.24%), Postives = 292/316 (92.41%), Query Frame = 0
BLAST of CsGy1G000220 vs. NCBI nr
Match: KAG6587390.1 (Protein bicaudal C-like 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021373.1 Protein bicaudal C-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 529 bits (1363), Expect = 4.55e-188 Identity = 272/313 (86.90%), Postives = 286/313 (91.37%), Query Frame = 0
BLAST of CsGy1G000220 vs. ExPASy TrEMBL
Match: A0A0A0LRM8 (SAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G000710 PE=4 SV=1) HSP 1 Score: 599 bits (1545), Expect = 3.01e-216 Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of CsGy1G000220 vs. ExPASy TrEMBL
Match: A0A5A7UW08 (Protein bicaudal C-1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00200 PE=4 SV=1) HSP 1 Score: 595 bits (1534), Expect = 1.43e-214 Identity = 301/304 (99.01%), Postives = 303/304 (99.67%), Query Frame = 0
BLAST of CsGy1G000220 vs. ExPASy TrEMBL
Match: E5GBM6 (SAM domain-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 595 bits (1534), Expect = 1.43e-214 Identity = 301/304 (99.01%), Postives = 303/304 (99.67%), Query Frame = 0
BLAST of CsGy1G000220 vs. ExPASy TrEMBL
Match: A0A1S3CLT3 (uncharacterized protein LOC103502284 OS=Cucumis melo OX=3656 GN=LOC103502284 PE=4 SV=1) HSP 1 Score: 595 bits (1534), Expect = 1.43e-214 Identity = 301/304 (99.01%), Postives = 303/304 (99.67%), Query Frame = 0
BLAST of CsGy1G000220 vs. ExPASy TrEMBL
Match: A0A6J1BZB7 (uncharacterized protein LOC111007101 OS=Momordica charantia OX=3673 GN=LOC111007101 PE=4 SV=1) HSP 1 Score: 539 bits (1389), Expect = 2.50e-192 Identity = 282/316 (89.24%), Postives = 292/316 (92.41%), Query Frame = 0
BLAST of CsGy1G000220 vs. TAIR 10
Match: AT3G48800.1 (Sterile alpha motif (SAM) domain-containing protein ) HSP 1 Score: 196.4 bits (498), Expect = 3.2e-50 Identity = 143/331 (43.20%), Postives = 188/331 (56.80%), Query Frame = 0
BLAST of CsGy1G000220 vs. TAIR 10
Match: AT5G23680.1 (Sterile alpha motif (SAM) domain-containing protein ) HSP 1 Score: 163.7 bits (413), Expect = 2.3e-40 Identity = 137/350 (39.14%), Postives = 183/350 (52.29%), Query Frame = 0
BLAST of CsGy1G000220 vs. TAIR 10
Match: AT2G45700.1 (sterile alpha motif (SAM) domain-containing protein ) HSP 1 Score: 48.1 bits (113), Expect = 1.4e-05 Identity = 22/58 (37.93%), Postives = 35/58 (60.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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