Cp4.1LG20g07070 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g07070
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Epidermal patterning factor-like protein
Location	Cp4.1LG20: 5881508 .. 5882398 (-)
RNA-Seq Expression	Cp4.1LG20g07070
Synteny	Cp4.1LG20g07070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGTAAATGAAGAGGGAGGTGGTGACAGCTGAAAATTTAAATTGTAAGTTTAAAAAAGAGGTAGTAGCAGTTGGTCGTATGCTGTGGCTAGCGGCCTCCATAGTAAAAAGAATACACATAAAAGGATAGAGGATTGATAGAGGAAGGAGATGGGTCGGCCACCTACTCGAATTCGTTCATCACTTCGATAGATCTTGGGACGATTGGATAGTGACATACGCATGTGCCACAAGGTAGCTCGCTTAGACCACAGGGTCTAGAGGTGGTGGAGAGTTGACACCATGTCATCCCTTAAGGTACATTTTCAGACATTTCCAATCATTTTTGGGTAGACGTCATTATTAACTAAGGGAGAGAAAACCAATGGAATAAAAAAATTTAAAATAAAAGATAAATAATAGGAGAAAATGTCCTTTTTTAAAAAATTTCCTTCCCTCTTTATAGCATATTTTAAACCTAAACCTAAACCCATCTTCTTCTTATTGTTTTTCATTATCTTCATATTGTCCTCGGACAACACTAGACGTTGCTCATCTACTGAATCCATGCACATATCTAGGTAAATTTATTTTAGTTCCACTATTATAATGGCTTATTCATCACCTTCCTCATATATTTTCTTACAAATACCTATTTTTGCACCCAAAAAATTTAATGCTAATATACTATGCAAGCCCATAACTAATCATGAAGATTAGGAGTTGACCTTGCCAAGAAGAGGATTGGGTGGGCCGGGATCGTCGCCGCCAAACTGCAGCTCAAAGTGTGGGAGCTGCACGCCCTGCACTACTGTTCTTGTGTCGGTGCTGCCGGGACCTCCAGGCATCGATGATGATTTCCCGGAAGTCTGGAGATGCAAATGTGGGAACAAGCTCTACATGCCCTGA

mRNA sequence

ATGGTTGAGTTGACCTTGCCAAGAAGAGGATTGGGTGGGCCGGGATCGTCGCCGCCAAACTGCAGCTCAAAGTGTGGGAGCTGCACGCCCTGCACTACTGTTCTTGTGTCGGTGCTGCCGGGACCTCCAGGCATCGATGATGATTTCCCGGAAGTCTGGAGATGCAAATGTGGGAACAAGCTCTACATGCCCTGA

Coding sequence (CDS)

ATGGTTGAGTTGACCTTGCCAAGAAGAGGATTGGGTGGGCCGGGATCGTCGCCGCCAAACTGCAGCTCAAAGTGTGGGAGCTGCACGCCCTGCACTACTGTTCTTGTGTCGGTGCTGCCGGGACCTCCAGGCATCGATGATGATTTCCCGGAAGTCTGGAGATGCAAATGTGGGAACAAGCTCTACATGCCCTGA

Protein sequence

MVELTLPRRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLYMP

Homology

[Close]

BLAST of Cp4.1LG20g07070 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.7e-17
Identity = 39/57 (68.42%), Postives = 41/57 (71.93%), Query Frame = 0


Query: 8   RRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLYMP 65
           RR L G GSSPP CSSKCG CTPC  V V V PG P   + +PE WRCKCGNKLYMP
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of Cp4.1LG20g07070 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.0e-14
Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 12  GGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLYMP 65
           GGPGSSPP C SKCG C PC  V V + PG     + +PE WRCKCGNKL+MP
Sbjct: 57  GGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of Cp4.1LG20g07070 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.1e-13
Identity = 32/57 (56.14%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 8   RRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLYMP 65
           ++ LGGPGS PP C  KCG C PC  V V + PG     + +PE WRCKCGNKL+MP
Sbjct: 51  QKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of Cp4.1LG20g07070 vs. ExPASy Swiss-Prot
Match: Q9FY19 (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 1.8e-08
Identity = 24/49 (48.98%), Postives = 30/49 (61.22%), Query Frame = 0


Query: 16  SSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLYMP 65
           SSPPNC +KC  C PC   L+ V P  P  +D +P+ W C C NK+Y P
Sbjct: 461 SSPPNCKNKCKGCQPCKPKLIIVHPNQP--EDYYPQRWVCSCHNKIYNP 507

[Close]

BLAST of Cp4.1LG20g07070 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.4e-08
Identity = 24/49 (48.98%), Postives = 29/49 (59.18%), Query Frame = 0


Query: 16  SSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLYMP 65
           SSPPNC +KC  C PC   L+ V P  P   D +P+ W C C NK+Y P
Sbjct: 468 SSPPNCKNKCKGCQPCKPKLIIVHPNKP--QDYYPQKWVCSCHNKIYNP 514

[Close]

BLAST of Cp4.1LG20g07070 vs. NCBI nr
Match: KAG6583315.1 (EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 137 bits (345), Expect = 3.36e-40
Identity = 58/62 (93.55%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 3   ELTLPRRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLY 62
           ELTLPRRGLGGPGSSPPNC+SKCGSCTPCTTVLVSV PGPPGI DDFPEVWRCKCGNK+Y
Sbjct: 51  ELTLPRRGLGGPGSSPPNCASKCGSCTPCTTVLVSVTPGPPGIGDDFPEVWRCKCGNKIY 110

Query: 63  MP 64
           MP
Sbjct: 111 MP 112

[Close]

BLAST of Cp4.1LG20g07070 vs. NCBI nr
Match: KAG6583645.1 (EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 132 bits (333), Expect = 2.27e-38
Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 3   ELTLPRRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLY 62
           ELTLPRRGLGG GSSPPNC+SKCGSCTPCTT+LVSV PGPPG+ DDFPEVWRCKCGNKLY
Sbjct: 51  ELTLPRRGLGGLGSSPPNCTSKCGSCTPCTTILVSVPPGPPGVGDDFPEVWRCKCGNKLY 110

Query: 63  MP 64
           MP
Sbjct: 111 MP 112

[Close]

BLAST of Cp4.1LG20g07070 vs. NCBI nr
Match: KAG6590330.1 (EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 122 bits (307), Expect = 5.97e-35
Identity = 53/62 (85.48%), Postives = 55/62 (88.71%), Query Frame = 0


Query: 3  ELTLPRRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLY 62
          ELTL RRGL G GSSPPNC SKCGSCTPCTTVLVSV PGP G+ DDFP+VWRCKCGNKLY
Sbjct: 8  ELTLSRRGLSGLGSSPPNCDSKCGSCTPCTTVLVSVPPGPSGVGDDFPKVWRCKCGNKLY 67

Query: 63 MP 64
          MP
Sbjct: 68 MP 69

[Close]

BLAST of Cp4.1LG20g07070 vs. NCBI nr
Match: KAG6583319.1 (EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 119 bits (299), Expect = 3.66e-33
Identity = 52/62 (83.87%), Postives = 54/62 (87.10%), Query Frame = 0


Query: 3   ELTLPRRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLY 62
           ELTL RRGL   GSSPPNC SKCGSCTPCTTVLVSV PGP G+ DDFP+VWRCKCGNKLY
Sbjct: 53  ELTLSRRGLSRLGSSPPNCDSKCGSCTPCTTVLVSVPPGPSGVGDDFPKVWRCKCGNKLY 112

Query: 63  MP 64
           MP
Sbjct: 113 MP 114

[Close]

BLAST of Cp4.1LG20g07070 vs. NCBI nr
Match: KAG6583317.1 (EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG6590332.1 EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117 bits (292), Expect = 4.02e-32
Identity = 51/62 (82.26%), Postives = 53/62 (85.48%), Query Frame = 0


Query: 3   ELTLPRRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLY 62
           ELTL  RGL   GSSPPNC SKCGSCTPCTTVLVSV PGP G+ DDFP+VWRCKCGNKLY
Sbjct: 51  ELTLSGRGLSRLGSSPPNCDSKCGSCTPCTTVLVSVPPGPSGVGDDFPKVWRCKCGNKLY 110

Query: 63  MP 64
           MP
Sbjct: 111 MP 112

[Close]

BLAST of Cp4.1LG20g07070 vs. ExPASy TrEMBL
Match: A0A5D3BE35 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00580 PE=3 SV=1)

HSP 1 Score: 105 bits (261), Expect = 8.87e-28
Identity = 44/61 (72.13%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 4   LTLPRRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLYM 63
           + LPRRGLGGPGSSPP C+SKCG CTPCT V V V PG P   + +PE WRCKCGNKLYM
Sbjct: 47  MRLPRRGLGGPGSSPPRCTSKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYM 106

[Close]

BLAST of Cp4.1LG20g07070 vs. ExPASy TrEMBL
Match: A0A0A0LXR9 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G533610 PE=3 SV=1)

HSP 1 Score: 105 bits (261), Expect = 2.60e-27
Identity = 44/61 (72.13%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 4   LTLPRRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLYM 63
           + LPRRGLGGPGSSPP C+SKCG CTPCT V V V PG P   + +PE WRCKCGNKLYM
Sbjct: 85  MRLPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYM 144

[Close]

BLAST of Cp4.1LG20g07070 vs. ExPASy TrEMBL
Match: A0A498K737 (Epidermal patterning factor-like protein OS=Malus domestica OX=3750 GN=DVH24_038363 PE=3 SV=1)

HSP 1 Score: 100 bits (248), Expect = 1.48e-25
Identity = 43/64 (67.19%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 1   MVELTLPRRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNK 60
           M+ L+L RR L GPGSSPP C+SKCG CTPC  V VSV PG P + + +PE WRCKCGNK
Sbjct: 64  MMPLSLARRYLSGPGSSPPRCTSKCGRCTPCKPVHVSVPPGTPVMAEYYPEAWRCKCGNK 123

Query: 61  LYMP 64
           LYMP
Sbjct: 124 LYMP 127

[Close]

BLAST of Cp4.1LG20g07070 vs. ExPASy TrEMBL
Match: A0A5N5FVQ0 (Epidermal patterning factor-like protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_006932 PE=3 SV=1)

HSP 1 Score: 100 bits (248), Expect = 1.48e-25
Identity = 43/64 (67.19%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 1   MVELTLPRRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNK 60
           M+ L+L RR L GPGSSPP C+SKCG CTPC  V VSV PG P + + +PE WRCKCGNK
Sbjct: 64  MMTLSLARRYLSGPGSSPPRCTSKCGRCTPCKPVHVSVPPGTPVMAEYYPEAWRCKCGNK 123

Query: 61  LYMP 64
           LYMP
Sbjct: 124 LYMP 127

[Close]

BLAST of Cp4.1LG20g07070 vs. ExPASy TrEMBL
Match: A0A5N5GSP7 (Epidermal patterning factor-like protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_023260 PE=3 SV=1)

HSP 1 Score: 100 bits (248), Expect = 1.48e-25
Identity = 43/64 (67.19%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 1   MVELTLPRRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNK 60
           M+ L+L RR L GPGSSPP C+SKCG CTPC  V VSV PG P + + +PE WRCKCGNK
Sbjct: 64  MMPLSLARRYLSGPGSSPPRCTSKCGRCTPCKPVHVSVPPGTPVMAEYYPEAWRCKCGNK 123

Query: 61  LYMP 64
           LYMP
Sbjct: 124 LYMP 127

[Close]

BLAST of Cp4.1LG20g07070 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 88.2 bits (217), Expect = 2.6e-18
Identity = 39/57 (68.42%), Postives = 41/57 (71.93%), Query Frame = 0


Query: 8   RRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLYMP 65
           RR L G GSSPP CSSKCG CTPC  V V V PG P   + +PE WRCKCGNKLYMP
Sbjct: 174 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 230

[Close]

BLAST of Cp4.1LG20g07070 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 88.2 bits (217), Expect = 2.6e-18
Identity = 39/57 (68.42%), Postives = 41/57 (71.93%), Query Frame = 0


Query: 8   RRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLYMP 65
           RR L G GSSPP CSSKCG CTPC  V V V PG P   + +PE WRCKCGNKLYMP
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of Cp4.1LG20g07070 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 7.1e-16
Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 12  GGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLYMP 65
           GGPGSSPP C SKCG C PC  V V + PG     + +PE WRCKCGNKL+MP
Sbjct: 57  GGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of Cp4.1LG20g07070 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 76.6 bits (187), Expect = 7.9e-15
Identity = 32/57 (56.14%), Postives = 38/57 (66.67%), Query Frame = 0


Query: 8   RRGLGGPGSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLYMP 65
           ++ LGGPGS PP C  KCG C PC  V V + PG     + +PE WRCKCGNKL+MP
Sbjct: 51  QKRLGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of Cp4.1LG20g07070 vs. TAIR 10
Match: AT2G20875.1 (epidermal patterning factor 1 )

HSP 1 Score: 48.1 bits (113), Expect = 3.0e-06
Identity = 20/48 (41.67%), Postives = 27/48 (56.25%), Query Frame = 0


Query: 15  GSSPPNCSSKCGSCTPCTTVLVSVLPGPPGIDDDFPEVWRCKCGNKLY 63
           GS  P+CS  CGSC+PC  V+VS +       +  P  ++C C NK Y
Sbjct: 54  GSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSY 101

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g07070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1PEY6	3.7e-17	68.42	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q2V3I3	1.0e-14	62.26	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LUH9	1.1e-13	56.14	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9FY19	1.8e-08	48.98	Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1	[more]
Q7M1E7	2.4e-08	48.98	Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1	[more]

BLAST of Cp4.1LG20g07070 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583315.1	3.36e-40	93.55	EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subs...	[more]
KAG6583645.1	2.27e-38	90.32	EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subs...	[more]
KAG6590330.1	5.97e-35	85.48	EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subs...	[more]
KAG6583319.1	3.66e-33	83.87	EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subs...	[more]
KAG6583317.1	4.02e-32	82.26	EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subs...	[more]

BLAST of Cp4.1LG20g07070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BE35	8.87e-28	72.13	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A0A0LXR9	2.60e-27	72.13	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G533...	[more]
A0A498K737	1.48e-25	67.19	Epidermal patterning factor-like protein OS=Malus domestica OX=3750 GN=DVH24_038...	[more]
A0A5N5FVQ0	1.48e-25	67.19	Epidermal patterning factor-like protein OS=Pyrus ussuriensis x Pyrus communis O...	[more]
A0A5N5GSP7	1.48e-25	67.19	Epidermal patterning factor-like protein OS=Pyrus ussuriensis x Pyrus communis O...	[more]

BLAST of Cp4.1LG20g07070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30370.1	2.6e-18	68.42	allergen-related	[more]
AT2G30370.2	2.6e-18	68.42	allergen-related	[more]
AT4G14723.1	7.1e-16	62.26	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);...	[more]
AT3G22820.1	7.9e-15	56.14	allergen-related	[more]
AT2G20875.1	3.0e-06	41.67	epidermal patterning factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 14..64 e-value: 6.2E-19 score: 67.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR33109:SF4	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 6	coord: 6..64
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 6..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g07070.1	Cp4.1LG20g07070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane