Cp4.1LG20g06920 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g06920
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	AB hydrolase-1 domain-containing protein
Location	Cp4.1LG20: 5324371 .. 5326228 (-)
RNA-Seq Expression	Cp4.1LG20g06920
Synteny	Cp4.1LG20g06920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTTGAAGGCGGTGGGTCTTTTGGGACTGGTTTATTGCGCCACGCAACTGCCTTCTCCACAAAACACTAAGAATCACAACTTAGAATGTTATGGAAGCTCTAAGGATATGAATGTTATGGCCACTCAGGTATGGATTCTGACCCCAACTTACAATCACAACTTGTATTACTAAGAACTATGTTGCCTTGCTTCTAAACTGGATTATGGGGTATATTAATATGGAATTCATTGTATGTTTAAAAGTCTATGGTTTTAACTTGTGAATTCTACCCAAGAGTTCCCGTGCCAATGGTGTTGTTTTTTTTTTTTACATTTACTCAAGATCTTCCTTCAAATGGTTGAGCTACAGTCCTTCCACTCGATACCGTCGGATCACTAAAGCCGACTTTCGTTCCTGCTCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTCCCTTGCACTCGAGGGTCTATCTCCGTCTGGCGTGACGAAACCTTTGCAGGCCTCCGTTACCTTTTGGGAGACTTACACCCAATAGAAACTGTCTACCTGAGACTATCCATTGGCCCGTAGATCCTGACACAAGGTTAGAATTCTAGCTCTTTTAGAGTGGTATCTCATTGATGACTCAGGCCCTCCCGGAAGGGAGCCTTCTTCGCCCTCCACCTAAACTGCACAGGAAATGCCCAAAGCTAATCCCAGGGAACAGTGAAGCTTCATAGGGTCTTTCTATCCAAGTGCACGTAGTCTGCATCTTCACAGACATATCTATTTCACCGAGCCTCTCTCCGAAATAGTGTCTAGATCGTTACGCCTTTCGTGCGGGTCGAAACTTACCCAACAAAGAATTTCGCTACCTTAAGACCGTTATAGTTACGACCGCCATTCACTGGGGCTCCAGTCTCTAACTTAGGAGAAACCGGTTTACTTTCCAAAATGATAAAGCTAAGGGTGAAAATGTTGAGAAGTTTCATGCCTAAACTCACATTGTTTTACTTTTGATCATCTCGTACAAATGTAGATGTTATTGTCATATATATACTTGATAACCATCCATCTCACAAAAATATGATATTATCTACTTTAAGCATAATCTTTCATAATTTTGCTTTTAGTTTTTCCAAAAGGTCTCGGGTAGTAGAGATGTATTTTTTACTTATAAACCTATGATTATCCTCTTAATTAGCCGATGTAGGACTCCTCTCTAAAAAATTCTCAACAATCCTCCCCTCGAACAAAGTGCCACCATAGAGCCTTCCCTGAGGCCTATGGAGCCCTCGAACAGCCTCTCCTTAATCGAGACTCAACTTCTTCTCTGGAGCCCTCGAACAAAGTACACCCTTTGTTCGACACTTGAGTCACTTTTGACTACTCTTTTGAGTCTCACAACTTTATTTTACATTTGAGGATTCTATTGACATGGCTCAAATACCATATACCATGTTAAAAACTACGAATCTCCACAATGGTATGATATTGTCTCAATAAAAGCTAATCATCACAGTTAGTGTGCTAAAATGTTGTTTGCTGATAGGATAAATTACGGGAAAGAGGTGTTTTTGACACCCTTCGCCGTGACTTCATGGTAGCGTTCCGCGAAAGGGGGTTCGATCCTATGCATGTAAGCAATCCTTTCCCTGAAAATGGAAGTCTAATGCACATATGGCAGGGTTATGAAGACAGGATTGTGCCGTTTGAACTTCAGAGATATGTTTATGGGAAGGTGGCATGGATTGAGTATCATGAAGTTCCTGATGGAGGCCATTTGATTGTGCATTATAAAGGTTTGTTTGAGACTATATCAAGGGCCCTTCTGCTTGGAGAACAATCTTATTCTTATCCCAAACCAAAGTTATCCAATATTGTAGCTTGA

mRNA sequence

ATGATTTTGAAGGCGGTGGGTCTTTTGGGACTGGTTTATTGCGCCACGCAACTGCCTTCTCCACAAAACACTAAGAATCACAACTTAGAATGTTATGGAAGCTCTAAGGATATGAATGTTATGGCCACTCAGGATAAATTACGGGAAAGAGGTGTTTTTGACACCCTTCGCCGTGACTTCATGGTAGCGTTCCGCGAAAGGGGGTTCGATCCTATGCATGTAAGCAATCCTTTCCCTGAAAATGGAAGTCTAATGCACATATGGCAGGGTTATGAAGACAGGATTGTGCCGTTTGAACTTCAGAGATATGTTTATGGGAAGGTGGCATGGATTGAGTATCATGAAGTTCCTGATGGAGGCCATTTGATTGTGCATTATAAAGGTTTGTTTGAGACTATATCAAGGGCCCTTCTGCTTGGAGAACAATCTTATTCTTATCCCAAACCAAAGTTATCCAATATTGTAGCTTGA

Coding sequence (CDS)

ATGATTTTGAAGGCGGTGGGTCTTTTGGGACTGGTTTATTGCGCCACGCAACTGCCTTCTCCACAAAACACTAAGAATCACAACTTAGAATGTTATGGAAGCTCTAAGGATATGAATGTTATGGCCACTCAGGATAAATTACGGGAAAGAGGTGTTTTTGACACCCTTCGCCGTGACTTCATGGTAGCGTTCCGCGAAAGGGGGTTCGATCCTATGCATGTAAGCAATCCTTTCCCTGAAAATGGAAGTCTAATGCACATATGGCAGGGTTATGAAGACAGGATTGTGCCGTTTGAACTTCAGAGATATGTTTATGGGAAGGTGGCATGGATTGAGTATCATGAAGTTCCTGATGGAGGCCATTTGATTGTGCATTATAAAGGTTTGTTTGAGACTATATCAAGGGCCCTTCTGCTTGGAGAACAATCTTATTCTTATCCCAAACCAAAGTTATCCAATATTGTAGCTTGA

Protein sequence

MILKAVGLLGLVYCATQLPSPQNTKNHNLECYGSSKDMNVMATQDKLRERGVFDTLRRDFMVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFELQRYVYGKVAWIEYHEVPDGGHLIVHYKGLFETISRALLLGEQSYSYPKPKLSNIVA

Homology

[Close]

BLAST of Cp4.1LG20g06920 vs. NCBI nr
Match: XP_023520280.1 (uncharacterized protein LOC111783588 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274 bits (700), Expect = 5.43e-92
Identity = 128/133 (96.24%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 1   MILKAVGLLGLVYCATQLPSPQNTKNHNLECYGSSKDMNVMATQDKLRERGVFDTLRRDF 60
           MILKAVGLLGLVYCATQLPSPQNTKNHNLECYGSSKDMNVMATQDKLRERGVFDTLRRDF
Sbjct: 1   MILKAVGLLGLVYCATQLPSPQNTKNHNLECYGSSKDMNVMATQDKLRERGVFDTLRRDF 60

Query: 61  MVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFELQRYVYGKVAWIEYHEVPDGG 120
           MVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFELQRYVYGKVAWIEYHEVPDGG
Sbjct: 61  MVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFELQRYVYGKVAWIEYHEVPDGG 120

Query: 121 HLIVHYKGLFETI 133
           HLIVHYK L+ ++
Sbjct: 121 HLIVHYKALWLSV 133

[Close]

BLAST of Cp4.1LG20g06920 vs. NCBI nr
Match: KAG6583655.1 (hypothetical protein SDJN03_19587, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 197 bits (501), Expect = 1.41e-62
Identity = 93/96 (96.88%), Postives = 93/96 (96.88%), Query Frame = 0


Query: 61  MVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFELQRYVYGKVAWIEYHEVPDGG 120
           MVAF ERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFELQRYVYGKVAWIEYHEVPD G
Sbjct: 1   MVAFGERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFELQRYVYGKVAWIEYHEVPDRG 60

Query: 121 HLIVHYKGLFETISRALLLGEQSYSYPKPKLSNIVA 156
           HLIVHYKGLFETISRALLL EQSYSYPKPKLSNIVA
Sbjct: 61  HLIVHYKGLFETISRALLLEEQSYSYPKPKLSNIVA 96

[Close]

BLAST of Cp4.1LG20g06920 vs. NCBI nr
Match: XP_038894680.1 (uncharacterized protein LOC120083151 [Benincasa hispida])

HSP 1 Score: 200 bits (508), Expect = 4.59e-60
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 41  MATQDKLRERGVFDTLRRDFMVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFEL 100
           M TQ+KLRERGVFDTLRRDFMVAF E GFDPM +SNPFPENGS +HIWQGYEDR+VPF+L
Sbjct: 251 MLTQNKLRERGVFDTLRRDFMVAFGEWGFDPMSLSNPFPENGSSVHIWQGYEDRVVPFQL 310

Query: 101 QRYVYGKVAWIEYHEVPDGGHLIVHYKGLFETISRALLLGEQSYSYPKPKLSNIV 155
           QRYV GK+ WI+YHEVPDGGHLIVHY+GLFE I RALL+GE+  +YPKP LSNI+
Sbjct: 311 QRYVSGKLPWIQYHEVPDGGHLIVHYRGLFEAILRALLVGEEFCTYPKPNLSNII 365

[Close]

BLAST of Cp4.1LG20g06920 vs. NCBI nr
Match: XP_008461575.1 (PREDICTED: uncharacterized protein LOC103500141 [Cucumis melo])

HSP 1 Score: 195 bits (496), Expect = 2.07e-58
Identity = 91/115 (79.13%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 41  MATQDKLRERGVFDTLRRDFMVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFEL 100
           M TQ+KLRERGVFDTLR DFMVAF E GFDPMH++NPFPENGS +HIWQGYEDR+VPF+L
Sbjct: 238 MFTQNKLRERGVFDTLRHDFMVAFGEWGFDPMHLNNPFPENGSSVHIWQGYEDRVVPFQL 297

Query: 101 QRYVYGKVAWIEYHEVPDGGHLIVHYKGLFETISRALLLGEQSYSYPKPKLSNIV 155
           QRYV  K+ WI+YHEVPDGGHLIVHY+GLF TI RALLLGE+  S PKP LSNIV
Sbjct: 298 QRYVSRKLPWIQYHEVPDGGHLIVHYRGLFATILRALLLGEEFCSDPKPNLSNIV 352

[Close]

BLAST of Cp4.1LG20g06920 vs. NCBI nr
Match: XP_011654395.1 (uncharacterized protein LOC101208945 [Cucumis sativus] >XP_031736281.1 uncharacterized protein LOC101208945 [Cucumis sativus])

HSP 1 Score: 193 bits (490), Expect = 2.32e-57
Identity = 90/115 (78.26%), Postives = 99/115 (86.09%), Query Frame = 0


Query: 41  MATQDKLRERGVFDTLRRDFMVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFEL 100
           M  Q+KLRERGVFDTLR DFMVAF E GFDPM +SNPFPENGS +HIWQGYEDR+VPF+L
Sbjct: 251 MLAQNKLRERGVFDTLRHDFMVAFGEWGFDPMRLSNPFPENGSSVHIWQGYEDRVVPFQL 310

Query: 101 QRYVYGKVAWIEYHEVPDGGHLIVHYKGLFETISRALLLGEQSYSYPKPKLSNIV 155
           QRYV GK+ WI+YHEVPDGGHLIVHY+GLF TI RALLLGE+  S PKP LSN V
Sbjct: 311 QRYVSGKLPWIQYHEVPDGGHLIVHYRGLFATILRALLLGEEFCSDPKPNLSNTV 365

[Close]

BLAST of Cp4.1LG20g06920 vs. ExPASy TrEMBL
Match: A0A1S3CGB0 (uncharacterized protein LOC103500141 OS=Cucumis melo OX=3656 GN=LOC103500141 PE=4 SV=1)

HSP 1 Score: 195 bits (496), Expect = 1.00e-58
Identity = 91/115 (79.13%), Postives = 101/115 (87.83%), Query Frame = 0


Query: 41  MATQDKLRERGVFDTLRRDFMVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFEL 100
           M TQ+KLRERGVFDTLR DFMVAF E GFDPMH++NPFPENGS +HIWQGYEDR+VPF+L
Sbjct: 238 MFTQNKLRERGVFDTLRHDFMVAFGEWGFDPMHLNNPFPENGSSVHIWQGYEDRVVPFQL 297

Query: 101 QRYVYGKVAWIEYHEVPDGGHLIVHYKGLFETISRALLLGEQSYSYPKPKLSNIV 155
           QRYV  K+ WI+YHEVPDGGHLIVHY+GLF TI RALLLGE+  S PKP LSNIV
Sbjct: 298 QRYVSRKLPWIQYHEVPDGGHLIVHYRGLFATILRALLLGEEFCSDPKPNLSNIV 352

[Close]

BLAST of Cp4.1LG20g06920 vs. ExPASy TrEMBL
Match: A0A0A0LY77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G161590 PE=4 SV=1)

HSP 1 Score: 193 bits (490), Expect = 2.69e-58
Identity = 90/115 (78.26%), Postives = 99/115 (86.09%), Query Frame = 0


Query: 41  MATQDKLRERGVFDTLRRDFMVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFEL 100
           M  Q+KLRERGVFDTLR DFMVAF E GFDPM +SNPFPENGS +HIWQGYEDR+VPF+L
Sbjct: 198 MLAQNKLRERGVFDTLRHDFMVAFGEWGFDPMRLSNPFPENGSSVHIWQGYEDRVVPFQL 257

Query: 101 QRYVYGKVAWIEYHEVPDGGHLIVHYKGLFETISRALLLGEQSYSYPKPKLSNIV 155
           QRYV GK+ WI+YHEVPDGGHLIVHY+GLF TI RALLLGE+  S PKP LSN V
Sbjct: 258 QRYVSGKLPWIQYHEVPDGGHLIVHYRGLFATILRALLLGEEFCSDPKPNLSNTV 312

[Close]

BLAST of Cp4.1LG20g06920 vs. ExPASy TrEMBL
Match: A0A2P5DU42 (Alpha/beta hydrolase fold OS=Parasponia andersonii OX=3476 GN=PanWU01x14_031380 PE=4 SV=1)

HSP 1 Score: 166 bits (421), Expect = 1.28e-47
Identity = 78/115 (67.83%), Postives = 91/115 (79.13%), Query Frame = 0


Query: 41  MATQDKLRERGVFDTLRRDFMVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFEL 100
           M T D+LRE+GVFDTLR DF+V F    FDPM +SNPFP+N S +HIWQGYED++VPFEL
Sbjct: 226 MLTPDRLREKGVFDTLRDDFVVGFGNWEFDPMDLSNPFPQNQSSVHIWQGYEDKVVPFEL 285

Query: 101 QRYVYGKVAWIEYHEVPDGGHLIVHYKGLFETISRALLLGEQSYSYPKPKLSNIV 155
           QRYV  K+ WI YHEVPDGGHLI+HY GL+ETI RALLLGE+   Y +P L  IV
Sbjct: 286 QRYVSSKLPWIRYHEVPDGGHLIMHYNGLWETILRALLLGEEPLQY-RPNLRKIV 339

[Close]

BLAST of Cp4.1LG20g06920 vs. ExPASy TrEMBL
Match: A0A6P5RI97 (uncharacterized protein LOC110746769 isoform X2 OS=Prunus avium OX=42229 GN=LOC110746769 PE=4 SV=1)

HSP 1 Score: 162 bits (409), Expect = 2.67e-47
Identity = 81/154 (52.60%), Postives = 105/154 (68.18%), Query Frame = 0


Query: 11  LVYCATQLPSPQNTKNHNLECYGSSKDMNVMAT--------QDKLRERGVFDTLRRDFMV 70
           L +  TQ   P  +       + +S+D+ V+ T        Q+KLR++GVFDTL  DF +
Sbjct: 62  LRWWVTQKWLPSTSVLERNPVFFNSRDIEVLKTIPGFPMLSQEKLRQKGVFDTLHHDFKL 121

Query: 71  AFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFELQRYVYGKVAWIEYHEVPDGGHL 130
           AF    FDPM +SNPFP+N S +HIWQGYED++VPF+LQRY+  K+ WI+YHEVPDGGHL
Sbjct: 122 AFSRWDFDPMDLSNPFPQNQSSVHIWQGYEDKVVPFQLQRYISCKLPWIQYHEVPDGGHL 181

Query: 131 IVHYKGLFETISRALLLGEQSYSYPKPKLSNIVA 156
           IVHY GL E I RALLLGE+   Y KP ++ IV+
Sbjct: 182 IVHYAGLCEAILRALLLGEEHLHY-KPTIAKIVS 214

[Close]

BLAST of Cp4.1LG20g06920 vs. ExPASy TrEMBL
Match: A0A660KM12 (AB hydrolase-1 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_010020 PE=4 SV=1)

HSP 1 Score: 166 bits (419), Expect = 3.49e-47
Identity = 85/148 (57.43%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 10  GLVYC-ATQ--LPSPQNTKNHNLECYGSSKDMNV--------MATQDKLRERGVFDTLRR 69
           GLVY  ATQ  LPS    + + L  + + +D+++        M T+DKLRERGVFDTLRR
Sbjct: 199 GLVYWWATQKWLPSTSGLERNPL--FFNDRDIDILKTISGFPMLTKDKLRERGVFDTLRR 258

Query: 70  DFMVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFELQRYVYGKVAWIEYHEVPD 129
           DFM+AF + GFDPM +SNP+P+N S +HIWQGYED++VPF+LQR+V GK+ WI YHEVPD
Sbjct: 259 DFMLAFGKWGFDPMDLSNPYPQNESSVHIWQGYEDKVVPFQLQRFVSGKLPWIRYHEVPD 318

Query: 130 GGHLIVHYKGLFETISRALLLGEQSYSY 146
           GGHL+V+Y  + E I RALLL E+  SY
Sbjct: 319 GGHLLVYYSSVCEAILRALLLREEPVSY 344

[Close]

BLAST of Cp4.1LG20g06920 vs. TAIR 10
Match: AT3G44510.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 1.7e-31
Identity = 66/114 (57.89%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 41  MATQDKLRERGVFDTLRRDFMVAFRERGFDPMHVSNPF---PENG-SLMHIWQGYEDRIV 100
           M T++KLRERGVF TLR DF+VAF +  FDP  + +P    PE G S +HIWQGYED+++
Sbjct: 100 MLTKEKLRERGVFGTLRSDFLVAFGDWDFDPADLPDPSLSGPEKGSSSVHIWQGYEDKVM 159

Query: 101 PFELQRYVYGKVAWIEYHEVPDGGHLIVHYKGLFETISRALLLGEQSYSYPKPK 151
           PF+LQR +  K+ WI YHEVP GGHLIVHY G+ + I ++LLLGE    Y KPK
Sbjct: 160 PFQLQRCLCRKLPWIRYHEVPKGGHLIVHYDGICDAILKSLLLGEDLPMY-KPK 212

[Close]

BLAST of Cp4.1LG20g06920 vs. TAIR 10
Match: AT3G44510.2 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 1.7e-31
Identity = 66/114 (57.89%), Postives = 83/114 (72.81%), Query Frame = 0


Query: 41  MATQDKLRERGVFDTLRRDFMVAFRERGFDPMHVSNPF---PENG-SLMHIWQGYEDRIV 100
           M T++KLRERGVF TLR DF+VAF +  FDP  + +P    PE G S +HIWQGYED+++
Sbjct: 206 MLTKEKLRERGVFGTLRSDFLVAFGDWDFDPADLPDPSLSGPEKGSSSVHIWQGYEDKVM 265

Query: 101 PFELQRYVYGKVAWIEYHEVPDGGHLIVHYKGLFETISRALLLGEQSYSYPKPK 151
           PF+LQR +  K+ WI YHEVP GGHLIVHY G+ + I ++LLLGE    Y KPK
Sbjct: 266 PFQLQRCLCRKLPWIRYHEVPKGGHLIVHYDGICDAILKSLLLGEDLPMY-KPK 318

[Close]

BLAST of Cp4.1LG20g06920 vs. TAIR 10
Match: AT1G08310.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 9.8e-27
Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 41  MATQDKLRERGVFDTLRRDFMVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFEL 100
           M T++KLRER VFDTLR DFMV F +  F+P  +S       S +HIW G ED++VPF+L
Sbjct: 209 MLTKEKLRERNVFDTLRDDFMVCFGQWDFEPADLS---ISTKSYIHIWHGKEDKVVPFQL 268

Query: 101 QRYVYGKVAWIEYHEVPDGGHLIVHYKGLFETISRALLLGEQ 143
           QR +  K   I YHE+P GGHLIVHY G+ +TI RALLL E+
Sbjct: 269 QRCILQKQPLINYHEIPQGGHLIVHYDGICDTILRALLLKEE 307

[Close]

BLAST of Cp4.1LG20g06920 vs. TAIR 10
Match: AT1G08310.2 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 9.8e-27
Identity = 57/102 (55.88%), Postives = 71/102 (69.61%), Query Frame = 0


Query: 41  MATQDKLRERGVFDTLRRDFMVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFEL 100
           M T++KLRER VFDTLR DFMV F +  F+P  +S       S +HIW G ED++VPF+L
Sbjct: 212 MLTKEKLRERNVFDTLRDDFMVCFGQWDFEPADLS---ISTKSYIHIWHGKEDKVVPFQL 271

Query: 101 QRYVYGKVAWIEYHEVPDGGHLIVHYKGLFETISRALLLGEQ 143
           QR +  K   I YHE+P GGHLIVHY G+ +TI RALLL E+
Sbjct: 272 QRCILQKQPLINYHEIPQGGHLIVHYDGICDTILRALLLKEE 310

[Close]

BLAST of Cp4.1LG20g06920 vs. TAIR 10
Match: AT3G48410.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 102.8 bits (255), Expect = 2.5e-22
Identity = 42/99 (42.42%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 47  LRERGVFDTLRRDFMVAFRERGFDPMHVSNPFPENGSLMHIWQGYEDRIVPFELQRYVYG 106
           +R++G + +L RD  VAF    FDP+ + +PFP N   +H+W G ED+ VP +LQRYV  
Sbjct: 280 IRQQGEYVSLHRDLNVAFSSWEFDPLDLQDPFPNNNGSVHVWNGDEDKFVPVKLQRYVAS 339

Query: 107 KVAWIEYHEVPDGGHLIVHYKGLFETISRALLLGEQSYS 146
           K+ WI YHE+   GH +   +G+ + I ++LL+GE+  S
Sbjct: 340 KLPWIRYHEISGSGHFVPFVEGMTDKIIKSLLVGEEDVS 378

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g06920 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG20g06920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520280.1	5.43e-92	96.24	uncharacterized protein LOC111783588 [Cucurbita pepo subsp. pepo]	[more]
KAG6583655.1	1.41e-62	96.88	hypothetical protein SDJN03_19587, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038894680.1	4.59e-60	79.13	uncharacterized protein LOC120083151 [Benincasa hispida]	[more]
XP_008461575.1	2.07e-58	79.13	PREDICTED: uncharacterized protein LOC103500141 [Cucumis melo]	[more]
XP_011654395.1	2.32e-57	78.26	uncharacterized protein LOC101208945 [Cucumis sativus] >XP_031736281.1 uncharact...	[more]

BLAST of Cp4.1LG20g06920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CGB0	1.00e-58	79.13	uncharacterized protein LOC103500141 OS=Cucumis melo OX=3656 GN=LOC103500141 PE=...	[more]
A0A0A0LY77	2.69e-58	78.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G161590 PE=4 SV=1	[more]
A0A2P5DU42	1.28e-47	67.83	Alpha/beta hydrolase fold OS=Parasponia andersonii OX=3476 GN=PanWU01x14_031380 ...	[more]
A0A6P5RI97	2.67e-47	52.60	uncharacterized protein LOC110746769 isoform X2 OS=Prunus avium OX=42229 GN=LOC1...	[more]
A0A660KM12	3.49e-47	57.43	AB hydrolase-1 domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972...	[more]

BLAST of Cp4.1LG20g06920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44510.1	1.7e-31	57.89	alpha/beta-Hydrolases superfamily protein	[more]
AT3G44510.2	1.7e-31	57.89	alpha/beta-Hydrolases superfamily protein	[more]
AT1G08310.1	9.8e-27	55.88	alpha/beta-Hydrolases superfamily protein	[more]
AT1G08310.2	9.8e-27	55.88	alpha/beta-Hydrolases superfamily protein	[more]
AT3G48410.1	2.5e-22	42.42	alpha/beta-Hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820	alpha/beta hydrolase	coord: 29..127 e-value: 4.0E-5 score: 25.4
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 52..127
None	No IPR available	PANTHER	PTHR45763:SF28	ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN	coord: 21..146
None	No IPR available	PANTHER	PTHR45763	HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED	coord: 21..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g06920.1	Cp4.1LG20g06920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0033388	putrescine biosynthetic process from arginine
molecular_function	GO:0050126	N-carbamoylputrescine amidase activity