Cp4.1LG20g06460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g06460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Structural maintenance of chromosomes protein
Location	Cp4.1LG20: 4160662 .. 4164015 (+)
RNA-Seq Expression	Cp4.1LG20g06460
Synteny	Cp4.1LG20g06460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCCGAACACAGAGCTGCAGAAGCTGCCACGTGTTCACTCCAACGCAGAATCGAACCTTCGTCCCTTTTTTTTTTGAAAAAAACCAATCTCTTCGCTTCATCTTCTCCAACTCGAAGAACAAAAGCCCTAAAAATGCGCTGAATCAAACATTGCCAAAATCTTAGTTTTTCTTCGAAGATTTGTGCGTGTAATTGAATCTTTCATTGTCAAGATCTCGAGCTTTTCATCTATGGCGAAAGTGATCAAGCCCTCTTCGCGCTACTGTTCCTACGATGTGCGATCTTCTACTTCCTCCCATTTCTCCGATCCTTCTTCTTCCTCTGAGTTCAAGCTCAAGTCTCCAATGGCTGCGAAATCATCGTCTTCGCGCGCTCTTGTTCAAATCAAGGCGTCTGATTTGGCTAGGACTAAGGCGAAGCCGTCGGATCAGAACTTGACGGCGATGGTGAAGAAATTCATGGAGAAGCGGTCTGGTTCGAAACCGAAGGCGGTGAAGCAGGCGGCGGGGTTGGTGATTCCGTCGGTTTTAATTGCGGAGGATTTGAAGAAGACGGCGAGGAAGGGGACGAACTTTGGAGGGCTGCATAAGAAGCTGTTTGGGAAGGGATCGGTGGAGAAGAAGGAGAAGGAGAAGGAGGTGAAGGCGTTGACGGAGGTTAAAGGGAATACGAGGACATTGGCGATGGTGCTGAGGAGTGAAAGAGAGCTTTTGGGTTTGAATAAGGAGCAGGAGTTGGAGATCACTGAGCTCAAATTAGTTCTGGAGGAGAAGTACAGAGAGGTGAGGATTGAGTATACACTACAATTGTAGTCATTACTTTTTTAACTAGAAAAATACTACTTTTTACTCTCCGTTCTAAATTATACTACAAAGTTTAGATTGCATGTTTAGAATCATTCGATTCCAATCTCAAACAAGTGTTCTTGCTTTGAGATATTCGATCAACAAAGTAATCCGTTCTAAAGCTTTCCCATGAGGTGATTCCTTATCATTAGTGCACTTGTGTTAAATTTTTGTTCTTCCTGAAAGATTGACGACGAGTCCGGATAAGAATATTGTTGTAGTTGAAGTTTTTTGGTCATGTTAGAGGCTCTTTATTCTTGAGCTAAATATGGCATTCTCATTATTAAGTTCGGATCTTTCTCTATTATGTTCGATTTTTTTGGGCGAAATCGTTTCGTGATTCGATTGTGGTACTTATGGTTGAATTTTGTGTTATGATTAGGGAGTAATGTGCCTGTCATTTTGCACATATTGTTTGTTAACACAACACTGTTTCTTATTGTTGTTGGTATCAGATTGAGAAGTTGAAAGATTTATGTTTGAAGCAAAGAGAAGAAATAAAGTCATTGAAGAATGCAATATTGTTCCCAGATGTTATGAACTCGCAGCTTCAAGATATTCTTGAAAAGCAGGGTTCAGAGTTGAAGCAAGCCAAACACATCATCCCCACTCTACAAAAGCAGGTCACCACTCTCACTGGCCAGCTTCATTCCCTCGCCGAGGACCTAGCCGAGGTATGAAAGAAAGCAATACTATTTACAATGATATATATCATTACAACTAAGACCTGAAACGTAGGAAAACTCTGTTTGACCGATTACCAAAGGGTATGATATTGTCCACTTTGAGCATAAGTTCTCGTGGTTTTACTTTTGATCCAAAAGGCCTCATTTTATGGAGATAGTGTTCCTTGCTTATAAACTCATGATCTTCCTCTTAATTAGCTAACGTGGGACTACTCCTTTCAATAATCCTCAACAATCCTCCTCTCGAACAAAGTATACCATAGAGCCTCCCTTGAGGCCTATAGAGCCCTCGAACAGTATCCCCTTAATCAAGACTCAACTTCTTTCTCTGGAACCCACAAACAAAGTACATTATTTGTTCAACACTTGAGATACTTTTGACTACACCTTCGAGGCTCACAATTTCTTTGTTCGATATTTAAGGATTATATTGACATGGCTAAGTTAAGGGCATGATTCTTATACCATGTTAGGAACCACAAACTCCACAATAGTATGATATTGTCTACTTTGAGCATAAGCTCTCATGGTTTTGCTTTTGGTTTCTCCAAAAGACCTCATGCCAATGGAGATAGTGTTTTTTACTTATAAACTTATGATCTTCCTCAACAGAGCTGGCTGTTGAATTGAGCAGCTTTTAACTATAGGATGATCCAATTTAGCTCTAGCCTCTGAAAGCTTTCATTTCTTTGATATGGGCTATGAAAGTACGACCGCTTAAAAGCTAAAAGAGCCTCTAATGAAATTTGGATGTTTCGTGATATGATTCTGATACCGAATAGCTGCTATTGTATGGGTATTCGTTGCTTCCTCTGTGGCAATTGATTTAGCTCATAGTACAATTGACATTTTATTTTGTGCAGGTAAAGGCTGATAAATATTCAGGAAAGTCTTGGTTACAAGGTAGTAGTTCTCCTCACACACCAACATATGATCATCACGAGGATGCTTCTAACTCATTGGTAAGCACAAAAGATACCCTTCATCTTCATGTCCATCATTTTAATGTTGGTTCATACCAATCCTGTCACGATTGCCCTGTTTGCTCAAATGAGCAAAGCTCTAGAGTATGGTTAGTAGTAGGGCCCTATTATTAATCATCTAGGACTTTGCTGCACCAAAGCATAGTCTATTTATCTACTAGATGTTAAATCACTCATCCAGCATTTGTGTAACTCAGGAGTTCAGTGACTGTGATCCAACGTCCCCAGGCAGTCCGGATGACTTTTTGTTGAAGGATGTGAATCCCTGTCTAACACCCTATTATGCAACTAAATCCAAGGTTTAACTGCCTATTTCTGCTGTTAATTTCTCACACCCCAAGAGTGTTCATTTATCAAACTAATCAACTGAACTCGTTCCCACAGGAGTTTGAGGCAATGGGATACGAAATTTCATCCCATAACAGAATTGAATCAGGTTTTGAATCTTGTTCCAGGAAGTTGTCCAAAAGTTCTGATTGCAGACAGAATTCCAACAAAGCAAACGTTACGAAAACAGCCCGGAGATCCGACGAGGCTAAATATACGTATGGAAAGACAATGCATAAATTTTACTGAACCTCAGTTCTTCCACCCAGGTTCGCATTCTTCATCCTTCTACATACCATTTTGTACTTTGTCACCTACTGTCACTGTATGAACCATTTTATATTGGATCTGATCCAACAACTGGACATATATATGCCAGGCGTTCTTCTTTGTTTATTATTGCTTGGGTGAAGAATAGTCCATTATTTTGAGCTTTAGGGCGTGTAATACCATCGTGTGCATGCTATACTTGTAAAGCTCATCAATAATAGTAAATGGTCCTATTTCTTTGAG

mRNA sequence

CGCCGAACACAGAGCTGCAGAAGCTGCCACGTGTTCACTCCAACGCAGAATCGAACCTTCGTCCCTTTTTTTTTTGAAAAAAACCAATCTCTTCGCTTCATCTTCTCCAACTCGAAGAACAAAAGCCCTAAAAATGCGCTGAATCAAACATTGCCAAAATCTTAGTTTTTCTTCGAAGATTTGTGCGTGTAATTGAATCTTTCATTGTCAAGATCTCGAGCTTTTCATCTATGGCGAAAGTGATCAAGCCCTCTTCGCGCTACTGTTCCTACGATGTGCGATCTTCTACTTCCTCCCATTTCTCCGATCCTTCTTCTTCCTCTGAGTTCAAGCTCAAGTCTCCAATGGCTGCGAAATCATCGTCTTCGCGCGCTCTTGTTCAAATCAAGGCGTCTGATTTGGCTAGGACTAAGGCGAAGCCGTCGGATCAGAACTTGACGGCGATGGTGAAGAAATTCATGGAGAAGCGGTCTGGTTCGAAACCGAAGGCGGTGAAGCAGGCGGCGGGGTTGGTGATTCCGTCGGTTTTAATTGCGGAGGATTTGAAGAAGACGGCGAGGAAGGGGACGAACTTTGGAGGGCTGCATAAGAAGCTGTTTGGGAAGGGATCGGTGGAGAAGAAGGAGAAGGAGAAGGAGGTGAAGGCGTTGACGGAGGTTAAAGGGAATACGAGGACATTGGCGATGGTGCTGAGGAGTGAAAGAGAGCTTTTGGGTTTGAATAAGGAGCAGGAGTTGGAGATCACTGAGCTCAAATTAGTTCTGGAGGAGAAGTACAGAGAGATTGAGAAGTTGAAAGATTTATGTTTGAAGCAAAGAGAAGAAATAAAGTCATTGAAGAATGCAATATTGTTCCCAGATGTTATGAACTCGCAGCTTCAAGATATTCTTGAAAAGCAGGGTTCAGAGTTGAAGCAAGCCAAACACATCATCCCCACTCTACAAAAGCAGGTCACCACTCTCACTGGCCAGCTTCATTCCCTCGCCGAGGACCTAGCCGAGGTAAAGGCTGATAAATATTCAGGAAAGTCTTGGTTACAAGGTAGTAGTTCTCCTCACACACCAACATATGATCATCACGAGGATGCTTCTAACTCATTGGAGTTCAGTGACTGTGATCCAACGTCCCCAGGCAGTCCGGATGACTTTTTGTTGAAGGATGTGAATCCCTGTCTAACACCCTATTATGCAACTAAATCCAAGGAGTTTGAGGCAATGGGATACGAAATTTCATCCCATAACAGAATTGAATCAGGTTTTGAATCTTGTTCCAGGAAGTTGTCCAAAAGTTCTGATTGCAGACAGAATTCCAACAAAGCAAACGTTACGAAAACAGCCCGGAGATCCGACGAGGCTAAATATACGTATGGAAAGACAATGCATAAATTTTACTGAACCTCAGTTCTTCCACCCAGGTTCGCATTCTTCATCCTTCTACATACCATTTTGTACTTTGTCACCTACTGTCACTGTATGAACCATTTTATATTGGATCTGATCCAACAACTGGACATATATATGCCAGGCGTTCTTCTTTGTTTATTATTGCTTGGGTGAAGAATAGTCCATTATTTTGAGCTTTAGGGCGTGTAATACCATCGTGTGCATGCTATACTTGTAAAGCTCATCAATAATAGTAAATGGTCCTATTTCTTTGAG

Coding sequence (CDS)

ATGGCGAAAGTGATCAAGCCCTCTTCGCGCTACTGTTCCTACGATGTGCGATCTTCTACTTCCTCCCATTTCTCCGATCCTTCTTCTTCCTCTGAGTTCAAGCTCAAGTCTCCAATGGCTGCGAAATCATCGTCTTCGCGCGCTCTTGTTCAAATCAAGGCGTCTGATTTGGCTAGGACTAAGGCGAAGCCGTCGGATCAGAACTTGACGGCGATGGTGAAGAAATTCATGGAGAAGCGGTCTGGTTCGAAACCGAAGGCGGTGAAGCAGGCGGCGGGGTTGGTGATTCCGTCGGTTTTAATTGCGGAGGATTTGAAGAAGACGGCGAGGAAGGGGACGAACTTTGGAGGGCTGCATAAGAAGCTGTTTGGGAAGGGATCGGTGGAGAAGAAGGAGAAGGAGAAGGAGGTGAAGGCGTTGACGGAGGTTAAAGGGAATACGAGGACATTGGCGATGGTGCTGAGGAGTGAAAGAGAGCTTTTGGGTTTGAATAAGGAGCAGGAGTTGGAGATCACTGAGCTCAAATTAGTTCTGGAGGAGAAGTACAGAGAGATTGAGAAGTTGAAAGATTTATGTTTGAAGCAAAGAGAAGAAATAAAGTCATTGAAGAATGCAATATTGTTCCCAGATGTTATGAACTCGCAGCTTCAAGATATTCTTGAAAAGCAGGGTTCAGAGTTGAAGCAAGCCAAACACATCATCCCCACTCTACAAAAGCAGGTCACCACTCTCACTGGCCAGCTTCATTCCCTCGCCGAGGACCTAGCCGAGGTAAAGGCTGATAAATATTCAGGAAAGTCTTGGTTACAAGGTAGTAGTTCTCCTCACACACCAACATATGATCATCACGAGGATGCTTCTAACTCATTGGAGTTCAGTGACTGTGATCCAACGTCCCCAGGCAGTCCGGATGACTTTTTGTTGAAGGATGTGAATCCCTGTCTAACACCCTATTATGCAACTAAATCCAAGGAGTTTGAGGCAATGGGATACGAAATTTCATCCCATAACAGAATTGAATCAGGTTTTGAATCTTGTTCCAGGAAGTTGTCCAAAAGTTCTGATTGCAGACAGAATTCCAACAAAGCAAACGTTACGAAAACAGCCCGGAGATCCGACGAGGCTAAATATACGTATGGAAAGACAATGCATAAATTTTACTGA

Protein sequence

MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLARTKAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGLHKKLFGKGSVEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEEKYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQVTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSPGSPDDFLLKDVNPCLTPYYATKSKEFEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNSNKANVTKTARRSDEAKYTYGKTMHKFY

Homology

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BLAST of Cp4.1LG20g06460 vs. NCBI nr
Match: XP_023520379.1 (uncharacterized protein LOC111783692 [Cucurbita pepo subsp. pepo] >XP_023520380.1 uncharacterized protein LOC111783692 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 725 bits (1872), Expect = 5.46e-263
Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0


Query: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60
           MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART
Sbjct: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60

Query: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGLHK 120
           KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGLHK
Sbjct: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGLHK 120

Query: 121 KLFGKGSVEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE 180
           KLFGKGSVEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE
Sbjct: 121 KLFGKGSVEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE 180

Query: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ 240
           KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ
Sbjct: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ 240

Query: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP 300
           VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP
Sbjct: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP 300

Query: 301 GSPDDFLLKDVNPCLTPYYATKSKEFEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNS 360
           GSPDDFLLKDVNPCLTPYYATKSKEFEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNS
Sbjct: 301 GSPDDFLLKDVNPCLTPYYATKSKEFEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNS 360

Query: 361 NKANVTKTARRSDEAKYTYGKTMHKFY 387
           NKANVTKTARRSDEAKYTYGKTMHKFY
Sbjct: 361 NKANVTKTARRSDEAKYTYGKTMHKFY 387

[Close]

BLAST of Cp4.1LG20g06460 vs. NCBI nr
Match: XP_022927051.1 (uncharacterized protein LOC111433994 [Cucurbita moschata])

HSP 1 Score: 710 bits (1832), Expect = 6.31e-257
Identity = 381/387 (98.45%), Postives = 382/387 (98.71%), Query Frame = 0


Query: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60
           MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART
Sbjct: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60

Query: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGLHK 120
           KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQA GLVIPS LIAEDLKKTARKGTNFGGLHK
Sbjct: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAVGLVIPSDLIAEDLKKTARKGTNFGGLHK 120

Query: 121 KLFGKGSVEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE 180
           KLFGKGSVEKKEKE  VKALTEV+GNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE
Sbjct: 121 KLFGKGSVEKKEKE--VKALTEVRGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE 180

Query: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ 240
           KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQ KHIIPTLQKQ
Sbjct: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQTKHIIPTLQKQ 240

Query: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP 300
           VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP
Sbjct: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP 300

Query: 301 GSPDDFLLKDVNPCLTPYYATKSKEFEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNS 360
           GSPDDFLLKDVNPCLTPYYATKSKEFEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNS
Sbjct: 301 GSPDDFLLKDVNPCLTPYYATKSKEFEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNS 360

Query: 361 NKANVTKTARRSDEAKYTYGKTMHKFY 387
           NKANVTKTARRSDEAKYTYGKTMHKFY
Sbjct: 361 NKANVTKTARRSDEAKYTYGKTMHKFY 385

[Close]

BLAST of Cp4.1LG20g06460 vs. NCBI nr
Match: XP_023001589.1 (uncharacterized protein LOC111495672 [Cucurbita maxima] >XP_023001590.1 uncharacterized protein LOC111495672 [Cucurbita maxima])

HSP 1 Score: 704 bits (1818), Expect = 8.57e-255
Identity = 379/387 (97.93%), Postives = 381/387 (98.45%), Query Frame = 0


Query: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60
           MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART
Sbjct: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60

Query: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGLHK 120
           KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPS LIAEDLKKTARKGTNFGGLHK
Sbjct: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSDLIAEDLKKTARKGTNFGGLHK 120

Query: 121 KLFGKGSVEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE 180
           KLFGKGSVEKKEKE  VKALTEVKGNTRTLAMVLRSERELLGLNKEQELEI ELKLVLEE
Sbjct: 121 KLFGKGSVEKKEKE--VKALTEVKGNTRTLAMVLRSERELLGLNKEQELEINELKLVLEE 180

Query: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ 240
           KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ
Sbjct: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ 240

Query: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP 300
           VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP
Sbjct: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP 300

Query: 301 GSPDDFLLKDVNPCLTPYYATKSKEFEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNS 360
           GSPDDFLLKDVNPCLTPYYATKSKEF+AMGYEISSHNRIES FESCSRKLSKSSDCRQNS
Sbjct: 301 GSPDDFLLKDVNPCLTPYYATKSKEFKAMGYEISSHNRIESSFESCSRKLSKSSDCRQNS 360

Query: 361 NKANVTKTARRSDEAKYTYGKTMHKFY 387
           +KANVTKTARRSDEAKYTYGK MHKFY
Sbjct: 361 DKANVTKTARRSDEAKYTYGKAMHKFY 385

[Close]

BLAST of Cp4.1LG20g06460 vs. NCBI nr
Match: KAG6583743.1 (Protein NAR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 672 bits (1733), Expect = 1.04e-233
Identity = 373/413 (90.31%), Postives = 374/413 (90.56%), Query Frame = 0


Query: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60
           MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART
Sbjct: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60

Query: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGLHK 120
           KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPS LIAEDLKKTARKGTNFGGLHK
Sbjct: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSDLIAEDLKKTARKGTNFGGLHK 120

Query: 121 KLFGKGSVEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE 180
           KLFGKGSVEKKEKE  VKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE
Sbjct: 121 KLFGKGSVEKKEKE--VKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE 180

Query: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ 240
           KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ
Sbjct: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ 240

Query: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSL---------- 300
           VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSP TPTYDHHEDASNSL          
Sbjct: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPRTPTYDHHEDASNSLVSTKDTLRSS 300

Query: 301 -------------------------EFSDCDPTSPGSPDDFLLKDVNPCLTPYYATKSKE 360
                                    EFSDCDPTSPGSPDDFLLKDVNPCLTPYYATKSKE
Sbjct: 301 YPSFNVGSCQSCHDCPVCSNEQSSREFSDCDPTSPGSPDDFLLKDVNPCLTPYYATKSKE 360

Query: 361 FEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNSNKANVTKTARRSDEAKYT 378
           FEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNS+KANVTKTARRSDEAKYT
Sbjct: 361 FEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNSDKANVTKTARRSDEAKYT 411

[Close]

BLAST of Cp4.1LG20g06460 vs. NCBI nr
Match: XP_038895034.1 (uncharacterized protein LOC120083373 [Benincasa hispida])

HSP 1 Score: 638 bits (1646), Expect = 1.58e-228
Identity = 352/391 (90.03%), Postives = 362/391 (92.58%), Query Frame = 0


Query: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60
           MAKV+KPSSRY SYDVRSSTSSHFSDPSSS EF LKSP+ A SSSSRALV+ K SDLAR 
Sbjct: 1   MAKVMKPSSRYSSYDVRSSTSSHFSDPSSSCEFNLKSPLPANSSSSRALVKTKPSDLARA 60

Query: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGLHK 120
           KAKPSDQNLTAMVKKFMEKRSGSKPK VKQAAGLVIPS LIAEDLKKTARKGTNFGGLHK
Sbjct: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKTVKQAAGLVIPSDLIAEDLKKTARKGTNFGGLHK 120

Query: 121 KLFGKGSVEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE 180
           KLFGKG+VEKKE  KEVKALTEVKGNTRTLAMVLRSERELL LNKEQELEITELKL+LEE
Sbjct: 121 KLFGKGTVEKKE-VKEVKALTEVKGNTRTLAMVLRSERELLSLNKEQELEITELKLILEE 180

Query: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ 240
           KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQ++LEKQ SELKQAK IIPTLQKQ
Sbjct: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQNMLEKQDSELKQAKQIIPTLQKQ 240

Query: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP 300
           VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGS SPHTPTYD  EDASNSLEFS CDPTSP
Sbjct: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSISPHTPTYDQ-EDASNSLEFSACDPTSP 300

Query: 301 GSPDDFLLKDVNPCLTPYYATKSKEFEAMGY-----EISSHNRIESGFESCSRKLSKSSD 360
           GSPDDFLLKDVNPCLTPYYATKSKEFEAMGY     EI SHNR+E GF+SCSRKLSKSSD
Sbjct: 301 GSPDDFLLKDVNPCLTPYYATKSKEFEAMGYDSPRDEILSHNRMEFGFKSCSRKLSKSSD 360

Query: 361 CRQNSNKANVTKTARRSDEAKYTYGKTMHKF 386
           CRQNS+KAN TKTARRSDEAKY YGK MHKF
Sbjct: 361 CRQNSDKANTTKTARRSDEAKYMYGKPMHKF 389

[Close]

BLAST of Cp4.1LG20g06460 vs. ExPASy TrEMBL
Match: A0A6J1EGL4 (uncharacterized protein LOC111433994 OS=Cucurbita moschata OX=3662 GN=LOC111433994 PE=4 SV=1)

HSP 1 Score: 710 bits (1832), Expect = 3.05e-257
Identity = 381/387 (98.45%), Postives = 382/387 (98.71%), Query Frame = 0


Query: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60
           MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART
Sbjct: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60

Query: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGLHK 120
           KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQA GLVIPS LIAEDLKKTARKGTNFGGLHK
Sbjct: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAVGLVIPSDLIAEDLKKTARKGTNFGGLHK 120

Query: 121 KLFGKGSVEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE 180
           KLFGKGSVEKKEKE  VKALTEV+GNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE
Sbjct: 121 KLFGKGSVEKKEKE--VKALTEVRGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE 180

Query: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ 240
           KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQ KHIIPTLQKQ
Sbjct: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQTKHIIPTLQKQ 240

Query: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP 300
           VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP
Sbjct: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP 300

Query: 301 GSPDDFLLKDVNPCLTPYYATKSKEFEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNS 360
           GSPDDFLLKDVNPCLTPYYATKSKEFEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNS
Sbjct: 301 GSPDDFLLKDVNPCLTPYYATKSKEFEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNS 360

Query: 361 NKANVTKTARRSDEAKYTYGKTMHKFY 387
           NKANVTKTARRSDEAKYTYGKTMHKFY
Sbjct: 361 NKANVTKTARRSDEAKYTYGKTMHKFY 385

[Close]

BLAST of Cp4.1LG20g06460 vs. ExPASy TrEMBL
Match: A0A6J1KN61 (uncharacterized protein LOC111495672 OS=Cucurbita maxima OX=3661 GN=LOC111495672 PE=4 SV=1)

HSP 1 Score: 704 bits (1818), Expect = 4.15e-255
Identity = 379/387 (97.93%), Postives = 381/387 (98.45%), Query Frame = 0


Query: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60
           MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART
Sbjct: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60

Query: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGLHK 120
           KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPS LIAEDLKKTARKGTNFGGLHK
Sbjct: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSDLIAEDLKKTARKGTNFGGLHK 120

Query: 121 KLFGKGSVEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE 180
           KLFGKGSVEKKEKE  VKALTEVKGNTRTLAMVLRSERELLGLNKEQELEI ELKLVLEE
Sbjct: 121 KLFGKGSVEKKEKE--VKALTEVKGNTRTLAMVLRSERELLGLNKEQELEINELKLVLEE 180

Query: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ 240
           KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ
Sbjct: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ 240

Query: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP 300
           VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP
Sbjct: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP 300

Query: 301 GSPDDFLLKDVNPCLTPYYATKSKEFEAMGYEISSHNRIESGFESCSRKLSKSSDCRQNS 360
           GSPDDFLLKDVNPCLTPYYATKSKEF+AMGYEISSHNRIES FESCSRKLSKSSDCRQNS
Sbjct: 301 GSPDDFLLKDVNPCLTPYYATKSKEFKAMGYEISSHNRIESSFESCSRKLSKSSDCRQNS 360

Query: 361 NKANVTKTARRSDEAKYTYGKTMHKFY 387
           +KANVTKTARRSDEAKYTYGK MHKFY
Sbjct: 361 DKANVTKTARRSDEAKYTYGKAMHKFY 385

[Close]

BLAST of Cp4.1LG20g06460 vs. ExPASy TrEMBL
Match: A0A1S3CL74 (uncharacterized protein LOC103501712 OS=Cucumis melo OX=3656 GN=LOC103501712 PE=4 SV=1)

HSP 1 Score: 634 bits (1636), Expect = 2.55e-227
Identity = 348/391 (89.00%), Postives = 363/391 (92.84%), Query Frame = 0


Query: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60
           MAKV+KPSSRY SYDVRSSTSSHFSDPSSSS+FK+KSP+ A SSSSRALV+ K +DLAR 
Sbjct: 1   MAKVMKPSSRYSSYDVRSSTSSHFSDPSSSSDFKIKSPLPANSSSSRALVKTKPTDLARA 60

Query: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGLHK 120
           K KPSDQNLTAMVKKFMEKRSGSKPKAVK AAGLVIPS LIAEDLKKTARKGT+FGGLHK
Sbjct: 61  KMKPSDQNLTAMVKKFMEKRSGSKPKAVKHAAGLVIPSDLIAEDLKKTARKGTSFGGLHK 120

Query: 121 KLFGKGSVEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE 180
           KLFGKG++EKK+  KEVKALTEVKGNTRTLAMVLRSERELL LNKEQELEITELKLVLEE
Sbjct: 121 KLFGKGTMEKKD-AKEVKALTEVKGNTRTLAMVLRSERELLSLNKEQELEITELKLVLEE 180

Query: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ 240
           KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQ++LEKQ SELKQAK IIPTLQKQ
Sbjct: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQNMLEKQDSELKQAKQIIPTLQKQ 240

Query: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP 300
           VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGS SPHTPTYDH EDASNSLEFS CDPTSP
Sbjct: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSISPHTPTYDH-EDASNSLEFSVCDPTSP 300

Query: 301 GSPDDFLLKDVNPCLTPYYATKSKEFEAMGY-----EISSHNRIESGFESCSRKLSKSSD 360
           GSPDDFLLKDVNPCLTPYYATKSKEFEAMGY     E  S NR+ESGF+SCSRKLSKSSD
Sbjct: 301 GSPDDFLLKDVNPCLTPYYATKSKEFEAMGYDSPRGETVSQNRMESGFKSCSRKLSKSSD 360

Query: 361 CRQNSNKANVTKTARRSDEAKYTYGKTMHKF 386
           CRQNSNKAN TKT R+SDEAKYTYGK MHKF
Sbjct: 361 CRQNSNKANTTKTGRQSDEAKYTYGKPMHKF 389

[Close]

BLAST of Cp4.1LG20g06460 vs. ExPASy TrEMBL
Match: A0A6J1EHN1 (uncharacterized protein LOC111432624 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432624 PE=4 SV=1)

HSP 1 Score: 626 bits (1615), Expect = 4.03e-224
Identity = 347/392 (88.52%), Postives = 354/392 (90.31%), Query Frame = 0


Query: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART 60
           MAKVI PSSRY SYDVRSS SSHFSDPSSSSEFKLKSPM A SSSSRA+V+ KA+DL R 
Sbjct: 1   MAKVINPSSRYSSYDVRSSGSSHFSDPSSSSEFKLKSPMKADSSSSRAIVKSKAADLPRA 60

Query: 61  KAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGLHK 120
           K KPSDQNLTAMVKKFMEKRSG KPK VK A GLVIPS LIAEDLKKTARKGTNFGGLHK
Sbjct: 61  KTKPSDQNLTAMVKKFMEKRSGLKPKTVKHATGLVIPSDLIAEDLKKTARKGTNFGGLHK 120

Query: 121 KLFGKGSVEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEE 180
           KLFGKG VEKKEKE  VKALTEVKGNTRTLAMVLRSERELL LNKEQELEITELKLVLEE
Sbjct: 121 KLFGKGMVEKKEKE--VKALTEVKGNTRTLAMVLRSERELLSLNKEQELEITELKLVLEE 180

Query: 181 KYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQ 240
           KY EIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQ ILEKQ SELKQAK IIPTLQKQ
Sbjct: 181 KYGEIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQGILEKQDSELKQAKQIIPTLQKQ 240

Query: 241 VTTLTGQLHSLAEDLAEVKADKYSGKSWLQGSSSPHTPTYDHHEDASNSLEFSDCDPTSP 300
           VTTLTGQL+SLAEDLAEVKADKYSGK WLQGSSSPHTPTYDH EDASN LEFS CDPTSP
Sbjct: 241 VTTLTGQLYSLAEDLAEVKADKYSGKGWLQGSSSPHTPTYDH-EDASNPLEFSACDPTSP 300

Query: 301 GSPDDFLLKDVNPCLTPYYATKSKEFEAMGY-----EISSHNRIESGFESCSRKLSKSSD 360
             PDD+LLKDVNPCLTPYYATKSK+FEAMGY     EI SHNR+ESGF SCSRKLSKSSD
Sbjct: 301 SRPDDYLLKDVNPCLTPYYATKSKDFEAMGYDSPRDEILSHNRMESGFTSCSRKLSKSSD 360

Query: 361 CRQNSNKANVTKTARRSDEAKYTYGKTMHKFY 387
           CRQNSNKA  TKTARRSDEAKYTYGK MHKFY
Sbjct: 361 CRQNSNKAKTTKTARRSDEAKYTYGKPMHKFY 389

[Close]

BLAST of Cp4.1LG20g06460 vs. ExPASy TrEMBL
Match: A0A6J1CNL5 (inner centromere protein A OS=Momordica charantia OX=3673 GN=LOC111012662 PE=4 SV=1)

HSP 1 Score: 624 bits (1610), Expect = 3.01e-223
Identity = 350/397 (88.16%), Postives = 361/397 (90.93%), Query Frame = 0


Query: 1   MAKVIKPSSRYCSYDVRSSTSSHFSDPSSSSEFKLKSPMAAKSSSS--RALVQIKASDLA 60
           MA VIKPSSRY SYDVRSSTSSHFSDPS+SSEFKLKSPMAA SSSS  RALV+ KASDLA
Sbjct: 1   MASVIKPSSRYSSYDVRSSTSSHFSDPSTSSEFKLKSPMAANSSSSSSRALVKSKASDLA 60

Query: 61  RTKAKPSDQNLTAMVKKFMEKRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGL 120
           R K+KPSDQNLTAMVKKFMEKRS SKPK  K A GLVIPS LIAEDLKKTARKGTNFGGL
Sbjct: 61  RAKSKPSDQNLTAMVKKFMEKRSASKPKTAKHATGLVIPSDLIAEDLKKTARKGTNFGGL 120

Query: 121 HKKLFGKGS--VEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKL 180
           HKKLFGKGS  VEKKEK++EVKALTEVKGNTRTLAMVLRSERELL LNKEQELEITELKL
Sbjct: 121 HKKLFGKGSAAVEKKEKKEEVKALTEVKGNTRTLAMVLRSERELLSLNKEQELEITELKL 180

Query: 181 VLEEKYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPT 240
           VLEEKYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQ++LEKQ SELKQAK IIPT
Sbjct: 181 VLEEKYREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQEMLEKQDSELKQAKQIIPT 240

Query: 241 LQKQVTTLTGQLHSLAEDLAEVKADKYSGKSWLQG-SSSPHTPTYDHHEDASNSLEFSDC 300
           LQKQVT LTGQLHSLAEDLAEVKADKYSGK+WLQ  SSSPHTPTYD  EDASNSLEFS C
Sbjct: 241 LQKQVTXLTGQLHSLAEDLAEVKADKYSGKAWLQNNSSSPHTPTYDD-EDASNSLEFSAC 300

Query: 301 DPTSPGSPDDFLLKDVNPCLTPYYATKSKEFEAMGY-----EISSHNRIESGFESCSRKL 360
           DPTSPGSPDDFLLKDVNPCLTPYYATKSKEFEAMGY     EI SHNR ESGFESCSRKL
Sbjct: 301 DPTSPGSPDDFLLKDVNPCLTPYYATKSKEFEAMGYDSPRDEILSHNRKESGFESCSRKL 360

Query: 361 SKSSDCRQNSNKANVTKTARRSDEAKYTYGKTMHKFY 387
           S+SSDCRQ SN+ N T+TARRSDEAKY YGK MHKFY
Sbjct: 361 SRSSDCRQKSNETNTTRTARRSDEAKYMYGKPMHKFY 396

[Close]

BLAST of Cp4.1LG20g06460 vs. TAIR 10
Match: AT4G17240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; Has 1142 Blast hits to 1055 proteins in 252 species: Archae - 22; Bacteria - 318; Metazoa - 248; Fungi - 96; Plants - 59; Viruses - 3; Other Eukaryotes - 396 (source: NCBI BLink). )

HSP 1 Score: 251.1 bits (640), Expect = 1.4e-66
Identity = 194/388 (50.00%), Postives = 238/388 (61.34%), Query Frame = 0


Query: 8   SSRYCSYDVRSS-TSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART----KA 67
           +SRY SYD RSS TSS  SD SSS+EFK   P+     SS+A+V+ K+S L +T    K 
Sbjct: 2   ASRYNSYDSRSSVTSSIHSDLSSSAEFKSNKPI-----SSKAIVRSKSSYLTKTTKPIKP 61

Query: 68  KPSDQNLTAMVKKFME-KRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGLHKK 127
             +  NLT M+KK ME K+S SK K V+    LVIP  L   D  K   K T  G L +K
Sbjct: 62  DSNPGNLTNMMKKLMEMKKSNSKSKRVE----LVIPEELKKIDTGKGGGKST-LGTLQRK 121

Query: 128 LFGKGSVEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEEK 187
           LFGK         ++VKALTEVK NTRTL+MVLRSERELLG+NK+QE+EI ELK  LEEK
Sbjct: 122 LFGK---------EKVKALTEVKSNTRTLSMVLRSERELLGMNKDQEVEIAELKFQLEEK 181

Query: 188 YREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQV 247
            RE+EKLKDLCLKQREEIKSLK+A+LFPD MNSQ+      Q  EL QA+ IIP LQKQV
Sbjct: 182 NREVEKLKDLCLKQREEIKSLKSAVLFPDSMNSQI-----NQMQELNQAREIIPNLQKQV 241

Query: 248 TTLTGQLHSLAEDLAEVKADKYSGKS--WLQGSSSPHTPTYDHHEDASNSLEFSDCDPTS 307
            +L GQL  +A+DLAEVKA+KY  +S  W        T +YD       SLEFS      
Sbjct: 242 ISLNGQLQCIAQDLAEVKANKYLSESCYW-----QAQTSSYD-------SLEFSS----- 301

Query: 308 PGSPDDFLLKDVNPCLTPYYATKSKEFEAMGYEISSHNRIESGFESCSRKLS-------- 367
            GSPD   L+D+NPCLTPY   K KE+E          R++S  ES S + +        
Sbjct: 302 -GSPDGLALEDLNPCLTPYTKKKPKEYE----------RVDSAEESLSGRSTITTTGGKV 337

Query: 368 KSSDCRQNSNKANVTKTARRSDEAKYTY 380
           KSS      ++++  K  +RS+E+K  Y
Sbjct: 362 KSSSRSVKMSRSSEGKAGQRSEESKGWY 337

[Close]

BLAST of Cp4.1LG20g06460 vs. TAIR 10
Match: AT4G17240.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages. )

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-50
Identity = 172/388 (44.33%), Postives = 219/388 (56.44%), Query Frame = 0


Query: 8   SSRYCSYDVRSS-TSSHFSDPSSSSEFKLKSPMAAKSSSSRALVQIKASDLART----KA 67
           +SRY SYD RSS TSS  SD SSS+EFK   P+     SS+A+V+ K+S L +T    K 
Sbjct: 2   ASRYNSYDSRSSVTSSIHSDLSSSAEFKSNKPI-----SSKAIVRSKSSYLTKTTKPIKP 61

Query: 68  KPSDQNLTAMVKKFME-KRSGSKPKAVKQAAGLVIPSVLIAEDLKKTARKGTNFGGLHKK 127
             +  NLT M+KK ME K+S SK K V+    LVIP  L   D  K   K T  G L +K
Sbjct: 62  DSNPGNLTNMMKKLMEMKKSNSKSKRVE----LVIPEELKKIDTGKGGGKST-LGTLQRK 121

Query: 128 LFGKGSVEKKEKEKEVKALTEVKGNTRTLAMVLRSERELLGLNKEQELEITELKLVLEEK 187
           LFGK         ++VKALTEVK NTRTL+M+            E+     ++K+ L   
Sbjct: 122 LFGK---------EKVKALTEVKSNTRTLSMI-----------HERLAVCNQIKVFL--- 181

Query: 188 YREIEKLKDLCLKQREEIKSLKNAILFPDVMNSQLQDILEKQGSELKQAKHIIPTLQKQV 247
             ++EKLKDLCLKQREEIKSLK+A+LFPD MNSQ+      Q  EL QA+ IIP LQKQV
Sbjct: 182 --QVEKLKDLCLKQREEIKSLKSAVLFPDSMNSQI-----NQMQELNQAREIIPNLQKQV 241

Query: 248 TTLTGQLHSLAEDLAEVKADKYSGKS--WLQGSSSPHTPTYDHHEDASNSLEFSDCDPTS 307
            +L GQL  +A+DLAEVKA+KY  +S  W        T +YD       SLEFS      
Sbjct: 242 ISLNGQLQCIAQDLAEVKANKYLSESCYW-----QAQTSSYD-------SLEFSS----- 301

Query: 308 PGSPDDFLLKDVNPCLTPYYATKSKEFEAMGYEISSHNRIESGFESCSRKLS-------- 367
            GSPD   L+D+NPCLTPY   K KE+E          R++S  ES S + +        
Sbjct: 302 -GSPDGLALEDLNPCLTPYTKKKPKEYE----------RVDSAEESLSGRSTITTTGGKV 321

Query: 368 KSSDCRQNSNKANVTKTARRSDEAKYTY 380
           KSS      ++++  K  +RS+E+K  Y
Sbjct: 362 KSSSRSVKMSRSSEGKAGQRSEESKGWY 321

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g06460 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG20g06460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023520379.1	5.46e-263	100.00	uncharacterized protein LOC111783692 [Cucurbita pepo subsp. pepo] >XP_023520380....	[more]
XP_022927051.1	6.31e-257	98.45	uncharacterized protein LOC111433994 [Cucurbita moschata]	[more]
XP_023001589.1	8.57e-255	97.93	uncharacterized protein LOC111495672 [Cucurbita maxima] >XP_023001590.1 uncharac...	[more]
KAG6583743.1	1.04e-233	90.31	Protein NAR1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038895034.1	1.58e-228	90.03	uncharacterized protein LOC120083373 [Benincasa hispida]	[more]

BLAST of Cp4.1LG20g06460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EGL4	3.05e-257	98.45	uncharacterized protein LOC111433994 OS=Cucurbita moschata OX=3662 GN=LOC1114339...	[more]
A0A6J1KN61	4.15e-255	97.93	uncharacterized protein LOC111495672 OS=Cucurbita maxima OX=3661 GN=LOC111495672...	[more]
A0A1S3CL74	2.55e-227	89.00	uncharacterized protein LOC103501712 OS=Cucumis melo OX=3656 GN=LOC103501712 PE=...	[more]
A0A6J1EHN1	4.03e-224	88.52	uncharacterized protein LOC111432624 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1CNL5	3.01e-223	88.16	inner centromere protein A OS=Momordica charantia OX=3673 GN=LOC111012662 PE=4 S...	[more]

BLAST of Cp4.1LG20g06460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G17240.1	1.4e-66	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G17240.2	1.1e-50	44.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 164..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	PANTHER	PTHR35493:SF1	STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN	coord: 3..385
None	No IPR available	PANTHER	PTHR35493	STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN	coord: 3..385

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g06460.1	Cp4.1LG20g06460.1	mRNA