Cp4.1LG20g05980 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g05980
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription termination factor MTEF18, mitochondrial-like
Location	Cp4.1LG20: 3653355 .. 3655094 (-)
RNA-Seq Expression	Cp4.1LG20g05980
Synteny	Cp4.1LG20g05980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTACCCAGCTCAATCACTTGCTGTTCTTTGCGCCTGTTCTATCTGAAAAAACTATTACTCAAGCTCATAATCCGTCTTTTGTTAGCTTTAAATCTCGATTGTTTTGCAATTATGGATTTGATATTCATCCCAGAGCGTCCCTTATAGAATCACCGCAATCGCCCACTACAGGTGGCCGAGTGTCTCGGTATGCAAGAACAGAGGCCCAGAAAGTGTTATTTGACTATCTGCATTGTACTAGGAGCCTCGGCTTTGCAGATGCTGAACATATAAGCAAGAACTCGCCTCATTTTCTTCAAAATTTGATCATGAAACTTGACAGCGAAAAAGATGTGGCTAGGTCTCTCAGAAAGTATCTTAGATACAATCCCATCAATGAATTCGAGCCATTCTTTGAAAGCCTGGGACTACCCCCATCAGAGCTCCCCTTGTTTCTTCCACGACGCTTGATGTTTTTGAGTGATGATCATCTTATGCTTGAAAACTTCCATGTTTTGTGCAATTATGGTATCCCGCGTAGCAAGATGGGCAAAATGTATAAGGAAGCAAGAGAAATATTTGCTTATGATTATGGTCTATTAGCCTCAAAACTTAGAGCTTATGAGGATTTAGGTCTTGGAATGGGCACACTTATTAAGCTTGTTAGTTGCTGCCCTTCACTTTTGATTGGTCAGATCAAAATGGAGTTCATCAAAGTTCTGGAGAAGCTAAGTAAATTAGGTATTGAAGAAGATTGGATTGGAGGATATATATCTCATAAAAGTACCTATAATTGGAATAGACTGGTTGACACTCTGGACTTTCTAGCTAAAGTAGGTTATACAGAGATACAGATGCACGATCTGTTTAAATCAAATCCCTCATTGCTGCTTGAAGATTCTGGGAAGAAAGTGTATGTATTATTCGTTCGATTAGTCAAGTTGGGTCTTAAGATGGACGAAGCTTATTCGATTTATAAACAAAACCCTGTAATTTTGTCTGGGAAGTATGTTAAAAACATTCTGAGAGCAGTAGATTTTCTCTTTGATATCGGGTTGGGAACAGAGGACATTGCAGGTATAGTATCTCATCAAATTCTGTTACTTGGTTCGTGTACTCTGAAAGGGCCGAAAACTGTCTGTAAAGAACTAAAAGTCGGAAAAGAAGGTTTATGTCTGATCATTCGAGACGACCCGTCCAAGCTGTTTACCTTGGCTTCCAAATCAAAGCTAAAAAGCAGTGAACAGGCTTCTTGCCAAAACCCCGCCAAAGAGATGGAGAAGACTACATTCCTGCTGAAGTTGGGATACGTCGAAAACTCAGATGAGTTGGCAAAGGCGTCGAAACAGTTTCGGGGTCGGGGAGATCAATTACAGGAGAGATTTGATTGCCTGGTAAATGCTGGTTTGGACTGTCATGTGGTGACAAATATAGTCAGACATGCGCCCATGGTTCTAAACCAGAGCAAAGATGTAATCCAAGAGAAGATTGATTGCTTAAGAAACTGTTTAGGTTACCCCTTGCATACAATAGCGGCATTCCCAGTTTATTTATGTTACAACATGGAGAGAATAAACACAAGATTTTCAATGTATAGATGGTTAAGGGATAAGGGTGCTGCAAAACCCAACTTATCATTGAGCACTGTCTTGGCTTGTTCTGATGCAAGATTTGTAAAATATTTTGTGGATGTTCATCCAGAAGGCCCCTCCATGTGGGAAAGTTGTAAAAAACATGGTCTCCATAATCATAGTTAA

mRNA sequence

ATGATTACCCAGCTCAATCACTTGCTGTTCTTTGCGCCTGTTCTATCTGAAAAAACTATTACTCAAGCTCATAATCCGTCTTTTGTTAGCTTTAAATCTCGATTGTTTTGCAATTATGGATTTGATATTCATCCCAGAGCGTCCCTTATAGAATCACCGCAATCGCCCACTACAGGTGGCCGAGTGTCTCGGTATGCAAGAACAGAGGCCCAGAAAGTGTTATTTGACTATCTGCATTGTACTAGGAGCCTCGGCTTTGCAGATGCTGAACATATAAGCAAGAACTCGCCTCATTTTCTTCAAAATTTGATCATGAAACTTGACAGCGAAAAAGATGTGGCTAGGTCTCTCAGAAAGTATCTTAGATACAATCCCATCAATGAATTCGAGCCATTCTTTGAAAGCCTGGGACTACCCCCATCAGAGCTCCCCTTGTTTCTTCCACGACGCTTGATGTTTTTGAGTGATGATCATCTTATGCTTGAAAACTTCCATGTTTTGTGCAATTATGGTATCCCGCGTAGCAAGATGGGCAAAATGTATAAGGAAGCAAGAGAAATATTTGCTTATGATTATGGTCTATTAGCCTCAAAACTTAGAGCTTATGAGGATTTAGGTCTTGGAATGGGCACACTTATTAAGCTTGTTAGTTGCTGCCCTTCACTTTTGATTGGTCAGATCAAAATGGAGTTCATCAAAGTTCTGGAGAAGCTAAGTAAATTAGGTATTGAAGAAGATTGGATTGGAGGATATATATCTCATAAAAGTACCTATAATTGGAATAGACTGGTTGACACTCTGGACTTTCTAGCTAAAGTAGGTTATACAGAGATACAGATGCACGATCTGTTTAAATCAAATCCCTCATTGCTGCTTGAAGATTCTGGGAAGAAAGTGTATGTATTATTCGTTCGATTAGTCAAGTTGGGTCTTAAGATGGACGAAGCTTATTCGATTTATAAACAAAACCCTGTAATTTTGTCTGGGAAGTATGTTAAAAACATTCTGAGAGCAGTAGATTTTCTCTTTGATATCGGGTTGGGAACAGAGGACATTGCAGGTATAGTATCTCATCAAATTCTGTTACTTGGTTCGTGTACTCTGAAAGGGCCGAAAACTGTCTGTAAAGAACTAAAAGTCGGAAAAGAAGGTTTATGTCTGATCATTCGAGACGACCCGTCCAAGCTGTTTACCTTGGCTTCCAAATCAAAGCTAAAAAGCAGTGAACAGGCTTCTTGCCAAAACCCCGCCAAAGAGATGGAGAAGACTACATTCCTGCTGAAGTTGGGATACGTCGAAAACTCAGATGAGTTGGCAAAGGCGTCGAAACAGTTTCGGGGTCGGGGAGATCAATTACAGGAGAGATTTGATTGCCTGGTAAATGCTGGTTTGGACTGTCATGTGGTGACAAATATAGTCAGACATGCGCCCATGGTTCTAAACCAGAGCAAAGATGTAATCCAAGAGAAGATTGATTGCTTAAGAAACTGTTTAGGTTACCCCTTGCATACAATAGCGGCATTCCCAGTTTATTTATGTTACAACATGGAGAGAATAAACACAAGATTTTCAATGTATAGATGGTTAAGGGATAAGGGTGCTGCAAAACCCAACTTATCATTGAGCACTGTCTTGGCTTGTTCTGATGCAAGATTTGTAAAATATTTTGTGGATGTTCATCCAGAAGGCCCCTCCATGTGGGAAAGTTGTAAAAAACATGGTCTCCATAATCATAGTTAA

Coding sequence (CDS)

ATGATTACCCAGCTCAATCACTTGCTGTTCTTTGCGCCTGTTCTATCTGAAAAAACTATTACTCAAGCTCATAATCCGTCTTTTGTTAGCTTTAAATCTCGATTGTTTTGCAATTATGGATTTGATATTCATCCCAGAGCGTCCCTTATAGAATCACCGCAATCGCCCACTACAGGTGGCCGAGTGTCTCGGTATGCAAGAACAGAGGCCCAGAAAGTGTTATTTGACTATCTGCATTGTACTAGGAGCCTCGGCTTTGCAGATGCTGAACATATAAGCAAGAACTCGCCTCATTTTCTTCAAAATTTGATCATGAAACTTGACAGCGAAAAAGATGTGGCTAGGTCTCTCAGAAAGTATCTTAGATACAATCCCATCAATGAATTCGAGCCATTCTTTGAAAGCCTGGGACTACCCCCATCAGAGCTCCCCTTGTTTCTTCCACGACGCTTGATGTTTTTGAGTGATGATCATCTTATGCTTGAAAACTTCCATGTTTTGTGCAATTATGGTATCCCGCGTAGCAAGATGGGCAAAATGTATAAGGAAGCAAGAGAAATATTTGCTTATGATTATGGTCTATTAGCCTCAAAACTTAGAGCTTATGAGGATTTAGGTCTTGGAATGGGCACACTTATTAAGCTTGTTAGTTGCTGCCCTTCACTTTTGATTGGTCAGATCAAAATGGAGTTCATCAAAGTTCTGGAGAAGCTAAGTAAATTAGGTATTGAAGAAGATTGGATTGGAGGATATATATCTCATAAAAGTACCTATAATTGGAATAGACTGGTTGACACTCTGGACTTTCTAGCTAAAGTAGGTTATACAGAGATACAGATGCACGATCTGTTTAAATCAAATCCCTCATTGCTGCTTGAAGATTCTGGGAAGAAAGTGTATGTATTATTCGTTCGATTAGTCAAGTTGGGTCTTAAGATGGACGAAGCTTATTCGATTTATAAACAAAACCCTGTAATTTTGTCTGGGAAGTATGTTAAAAACATTCTGAGAGCAGTAGATTTTCTCTTTGATATCGGGTTGGGAACAGAGGACATTGCAGGTATAGTATCTCATCAAATTCTGTTACTTGGTTCGTGTACTCTGAAAGGGCCGAAAACTGTCTGTAAAGAACTAAAAGTCGGAAAAGAAGGTTTATGTCTGATCATTCGAGACGACCCGTCCAAGCTGTTTACCTTGGCTTCCAAATCAAAGCTAAAAAGCAGTGAACAGGCTTCTTGCCAAAACCCCGCCAAAGAGATGGAGAAGACTACATTCCTGCTGAAGTTGGGATACGTCGAAAACTCAGATGAGTTGGCAAAGGCGTCGAAACAGTTTCGGGGTCGGGGAGATCAATTACAGGAGAGATTTGATTGCCTGGTAAATGCTGGTTTGGACTGTCATGTGGTGACAAATATAGTCAGACATGCGCCCATGGTTCTAAACCAGAGCAAAGATGTAATCCAAGAGAAGATTGATTGCTTAAGAAACTGTTTAGGTTACCCCTTGCATACAATAGCGGCATTCCCAGTTTATTTATGTTACAACATGGAGAGAATAAACACAAGATTTTCAATGTATAGATGGTTAAGGGATAAGGGTGCTGCAAAACCCAACTTATCATTGAGCACTGTCTTGGCTTGTTCTGATGCAAGATTTGTAAAATATTTTGTGGATGTTCATCCAGAAGGCCCCTCCATGTGGGAAAGTTGTAAAAAACATGGTCTCCATAATCATAGTTAA

Protein sequence

MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGGRVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKYLRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSKLGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS

Homology

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BLAST of Cp4.1LG20g05980 vs. ExPASy Swiss-Prot
Match: Q9M219 (Transcription termination factor MTEF18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF18 PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.9e-60
Identity = 151/515 (29.32%), Postives = 262/515 (50.87%), Query Frame = 0


Query: 69  EAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLD-SEKDVARSLRKYLRYNPIN 128
           +AQ+ + DYLH TRSL +  AE I+ N+   ++NLI+KLD S    ++SLRK+L Y+PIN
Sbjct: 36  KAQQAITDYLHTTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKSLRKHLSYHPIN 95

Query: 129 EFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKMYKEAREI 188
           EFE FFES+G+  SE+  FLP +  F S+D  +L+    L  +G P +K+GK+YKE R +
Sbjct: 96  EFEFFFESIGIDYSEVSEFLPEKKFFFSEDRTVLDAAFALSGFGFPWNKLGKLYKEERLV 155

Query: 189 FAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLI--GQIKMEFIKVLEKLSKLGIEE 248
           F    G + S+L  ++D+G     +I      P  L   G++  E   +  KL +L  E 
Sbjct: 156 FVQRPGEIESRLLKFKDIGFSTVAVIGTCLAIPRTLCGGGELGSEIRCLFVKLKRLFDEF 215

Query: 249 DWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFVR 308
           D    ++  ++  +W  +   +     +G    +M +L   N SL LE S + +      
Sbjct: 216 D--SHHLFEENVDSWLAVSRKIRIFYDLGCENEEMWELMCRNKSLFLEYSEEALMNKAGY 275

Query: 309 LVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQILLLGS 368
             + G+  ++A  +  +NP I++    K ++     L   GL  +++  +      + G 
Sbjct: 276 FCRFGVSKEDAALLILRNPAIMNFDLEKPVISVTGMLKHFGLRQDEVDAVAQKYPYVFGR 335

Query: 369 CTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQ------------ASC 428
             LK    V + + +  E +  I+++    L  LAS + +   E              + 
Sbjct: 336 NQLKNLPYVLRAIDL-HERIFDILKNGNHHL--LASYTLMDPDEDLEREYQEGLEELQNS 395

Query: 429 QNPAKEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIV 488
           +     ++K  FL ++G+ EN   + K  +   G   +L +RF  L+N+G+    +  ++
Sbjct: 396 RTKRHNIQKLDFLHEIGFGENGITM-KVLQHVHGTAVELHDRFQILLNSGIIFSKICMLI 455

Query: 489 RHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNME-RINTRFSMYRWLRDK 548
           R AP +LNQ    IQ+K+  L   +G  L  +  FP YLC+++E RI+ RF  ++WL +K
Sbjct: 456 RSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLEVFPAYLCFDLENRISPRFRFHKWLVEK 515

Query: 549 GAAKPNLSLSTVLACSDARFVKYFVDVHPEGPSMW 568
           G ++ + S+++++A S+  F+     +HP  P  W
Sbjct: 516 GFSEKSYSIASIVATSEKAFIARLYGIHPAIPKHW 544

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BLAST of Cp4.1LG20g05980 vs. ExPASy Swiss-Prot
Match: Q9C6A1 (Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF15 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 6.7e-09
Identity = 80/402 (19.90%), Postives = 159/402 (39.55%), Query Frame = 0


Query: 165 HVLCNYGIPRSKMGKMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLI 224
           ++L  YG P S +         +   D       L     L +   +L+ L+S CP++L 
Sbjct: 46  NLLQRYGFPPSSLQHFLSRNNHLLNSDLVETEISLGILLSLKIPQKSLVSLISDCPNVLR 105

Query: 225 GQIKMEFIKVLEKLSKLG-IEEDWIGGYISHKSTYNW--NRLVDTLDFLAKVGYTEIQMH 284
            +   ++   L    K G +    I   + H S      ++  + +  L  +G+ +  + 
Sbjct: 106 SEFLRKWRVPLSNCGKHGVVSSSAIKSVLEHSSRIGIGPDKFNECVRVLKSLGFCDSTVS 165

Query: 285 DLFKSNPSLLLEDSGKKVYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDF 344
            +  S P +LL +   ++      LV +G+  D     +   P +L       +   +D 
Sbjct: 166 RILSSFPGVLLVNE-IEIRRKIEFLVGIGIARDNIERFFHVFPEVLGIGTETRLKPLLDE 225

Query: 345 LFDIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLAS 404
              +G   +D+   ++ +  +LG             L++G+   CL +      + TL  
Sbjct: 226 FMKMGFSKDDVKKEIAREPRVLG-------------LELGELPRCLEL------INTLKC 285

Query: 405 KSKLKSSEQASCQNPAKEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVN 464
           +  ++ S                 ++  G              FR  G +++ R DCL  
Sbjct: 286 REVIRVS-----------------IISEG-------------AFRA-GFEVKLRVDCLCK 345

Query: 465 AGLDCHVVTNIVRHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMER-IN 524
            GL       +V   P V+    + I++KI+ L N +G+ ++ +A  P YL  N+++ I 
Sbjct: 346 YGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIV 396

Query: 525 TRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPE 563
            R+++  +L+ KG    ++ L  ++  S  RF   +V  +PE
Sbjct: 406 PRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPYPE 396

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BLAST of Cp4.1LG20g05980 vs. NCBI nr
Match: XP_023519412.1 (transcription termination factor MTEF18, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1175 bits (3039), Expect = 0.0
Identity = 579/579 (100.00%), Postives = 579/579 (100.00%), Query Frame = 0


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGG 60
           MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGG
Sbjct: 16  MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGG 75

Query: 61  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 120
           RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY
Sbjct: 76  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 135

Query: 121 LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 180
           LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM
Sbjct: 136 LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 195

Query: 181 YKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSK 240
           YKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSK
Sbjct: 196 YKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSK 255

Query: 241 LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 300
           LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY
Sbjct: 256 LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 315

Query: 301 VLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 360
           VLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI
Sbjct: 316 VLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 375

Query: 361 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEM 420
           LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEM
Sbjct: 376 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEM 435

Query: 421 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 480
           EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL
Sbjct: 436 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 495

Query: 481 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 540
           NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS
Sbjct: 496 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 555

Query: 541 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 579
           LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS
Sbjct: 556 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 594

[Close]

BLAST of Cp4.1LG20g05980 vs. NCBI nr
Match: KAG7019433.1 (Transcription termination factor MTEF18, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1163 bits (3009), Expect = 0.0
Identity = 572/579 (98.79%), Postives = 576/579 (99.48%), Query Frame = 0


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGG 60
           MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFD HPRASL+ESPQSPTT G
Sbjct: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDNHPRASLVESPQSPTTTG 60

Query: 61  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 120
           RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY
Sbjct: 61  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 120

Query: 121 LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 180
           LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM
Sbjct: 121 LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 180

Query: 181 YKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSK 240
           YKEAREIFAYDYGLLASKLRAYEDLGLGMGT+IKLVSCCPSLLIGQIKMEFIKVLEKLSK
Sbjct: 181 YKEAREIFAYDYGLLASKLRAYEDLGLGMGTVIKLVSCCPSLLIGQIKMEFIKVLEKLSK 240

Query: 241 LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 300
           LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY
Sbjct: 241 LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 300

Query: 301 VLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 360
           VLF RLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI
Sbjct: 301 VLFGRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 360

Query: 361 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEM 420
           LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAK+M
Sbjct: 361 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKQM 420

Query: 421 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 480
           EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL
Sbjct: 421 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 480

Query: 481 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 540
           NQSKD+IQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS
Sbjct: 481 NQSKDIIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 540

Query: 541 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 579
           LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS
Sbjct: 541 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 579

[Close]

BLAST of Cp4.1LG20g05980 vs. NCBI nr
Match: KAG6583809.1 (Transcription termination factor MTEF18, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1162 bits (3006), Expect = 0.0
Identity = 570/579 (98.45%), Postives = 575/579 (99.31%), Query Frame = 0


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGG 60
           MITQLNHLLFFAPVLSEKTITQAHNPSF+SFKSRLFCNYGFD HPRASL+ESPQSPTT G
Sbjct: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFISFKSRLFCNYGFDNHPRASLVESPQSPTTSG 60

Query: 61  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 120
           RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY
Sbjct: 61  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 120

Query: 121 LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 180
           LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM
Sbjct: 121 LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 180

Query: 181 YKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSK 240
           YKEAREIFAYDYGLLASKLRAYEDLGLGMGT+IKLVSCCPSLLIGQIKMEFIKVLEKLSK
Sbjct: 181 YKEAREIFAYDYGLLASKLRAYEDLGLGMGTVIKLVSCCPSLLIGQIKMEFIKVLEKLSK 240

Query: 241 LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 300
           LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY
Sbjct: 241 LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 300

Query: 301 VLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 360
           VLF R VKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI
Sbjct: 301 VLFGRFVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 360

Query: 361 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEM 420
           LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAK+M
Sbjct: 361 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKQM 420

Query: 421 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 480
           EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL
Sbjct: 421 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 480

Query: 481 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 540
           NQSKD+IQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS
Sbjct: 481 NQSKDIIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 540

Query: 541 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 579
           LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS
Sbjct: 541 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 579

[Close]

BLAST of Cp4.1LG20g05980 vs. NCBI nr
Match: XP_022927279.1 (transcription termination factor MTEF18, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 1153 bits (2983), Expect = 0.0
Identity = 567/579 (97.93%), Postives = 572/579 (98.79%), Query Frame = 0


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGG 60
           MITQLNHLLFFAPVLSEKTITQAHNPSF SFKSRLFCNYGFD HPRASLIESPQSPTT G
Sbjct: 16  MITQLNHLLFFAPVLSEKTITQAHNPSFFSFKSRLFCNYGFDNHPRASLIESPQSPTTSG 75

Query: 61  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 120
           RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY
Sbjct: 76  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 135

Query: 121 LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 180
           LRYNPINEFEPFFESLGLPPSELPLFLPR LMFLSDDHLMLENFHVLCNYGIPRSKMGKM
Sbjct: 136 LRYNPINEFEPFFESLGLPPSELPLFLPRHLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 195

Query: 181 YKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSK 240
           YKEARE+FAYDYGLLASKLRAYEDLGLGMGT+IKLVSCCPSLLIGQIKMEFIKVLEKLSK
Sbjct: 196 YKEAREVFAYDYGLLASKLRAYEDLGLGMGTVIKLVSCCPSLLIGQIKMEFIKVLEKLSK 255

Query: 241 LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 300
           LGIEEDWIGGYISHKSTYNWNRLVDT+DFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY
Sbjct: 256 LGIEEDWIGGYISHKSTYNWNRLVDTVDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 315

Query: 301 VLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 360
           VLF RLVKLGLKM+EAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI
Sbjct: 316 VLFGRLVKLGLKMNEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 375

Query: 361 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEM 420
           LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLF LASKSKLKSSEQASCQNPAK+M
Sbjct: 376 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFALASKSKLKSSEQASCQNPAKQM 435

Query: 421 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 480
           EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL
Sbjct: 436 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 495

Query: 481 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 540
           NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCY MERINTRFSMYRWLRDKGAAKPNLS
Sbjct: 496 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYKMERINTRFSMYRWLRDKGAAKPNLS 555

Query: 541 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 579
           LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS
Sbjct: 556 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 594

[Close]

BLAST of Cp4.1LG20g05980 vs. NCBI nr
Match: XP_023000703.1 (transcription termination factor MTEF18, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 1135 bits (2937), Expect = 0.0
Identity = 557/579 (96.20%), Postives = 569/579 (98.27%), Query Frame = 0


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGG 60
           MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTT G
Sbjct: 16  MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTSG 75

Query: 61  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 120
           RVSR ARTEAQKVLFDYLHCTRSLGFADAE+ISKNSPHFLQ+LI+KLDSEKDVARSL KY
Sbjct: 76  RVSRNARTEAQKVLFDYLHCTRSLGFADAEYISKNSPHFLQDLILKLDSEKDVARSLTKY 135

Query: 121 LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 180
           LRYNPINEFEPFFESLGLPPSELP FLPR LMFLSDDHLMLENFHVLCNYGIPRSK+GKM
Sbjct: 136 LRYNPINEFEPFFESLGLPPSELPSFLPRHLMFLSDDHLMLENFHVLCNYGIPRSKIGKM 195

Query: 181 YKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSK 240
           YKEARE+FAYDYGLLASKLRAYEDLGLGMGT+IKLVSCCPSLLIGQIKMEF KVLEKLSK
Sbjct: 196 YKEAREVFAYDYGLLASKLRAYEDLGLGMGTVIKLVSCCPSLLIGQIKMEFFKVLEKLSK 255

Query: 241 LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 300
           LGIE+DWIGGYIS+KSTYNWNRLVDT+DFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY
Sbjct: 256 LGIEKDWIGGYISYKSTYNWNRLVDTVDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 315

Query: 301 VLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 360
           VLF RLVKLGLKMDEAYSIYKQNPVILSG YVKNILRAVDFLF+IGLGTEDIAGIVSHQI
Sbjct: 316 VLFGRLVKLGLKMDEAYSIYKQNPVILSGNYVKNILRAVDFLFEIGLGTEDIAGIVSHQI 375

Query: 361 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEM 420
           LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAK+M
Sbjct: 376 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKQM 435

Query: 421 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 480
           EKT FLLKLGYVENSDELAKA KQFRGRGDQLQERFDCLVNAGLDCHVVTNI+RHAPMVL
Sbjct: 436 EKTAFLLKLGYVENSDELAKALKQFRGRGDQLQERFDCLVNAGLDCHVVTNIIRHAPMVL 495

Query: 481 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 540
           NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS
Sbjct: 496 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 555

Query: 541 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 579
           LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS
Sbjct: 556 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 594

[Close]

BLAST of Cp4.1LG20g05980 vs. ExPASy TrEMBL
Match: A0A6J1EHL0 (transcription termination factor MTEF18, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111434165 PE=3 SV=1)

HSP 1 Score: 1153 bits (2983), Expect = 0.0
Identity = 567/579 (97.93%), Postives = 572/579 (98.79%), Query Frame = 0


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGG 60
           MITQLNHLLFFAPVLSEKTITQAHNPSF SFKSRLFCNYGFD HPRASLIESPQSPTT G
Sbjct: 16  MITQLNHLLFFAPVLSEKTITQAHNPSFFSFKSRLFCNYGFDNHPRASLIESPQSPTTSG 75

Query: 61  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 120
           RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY
Sbjct: 76  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 135

Query: 121 LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 180
           LRYNPINEFEPFFESLGLPPSELPLFLPR LMFLSDDHLMLENFHVLCNYGIPRSKMGKM
Sbjct: 136 LRYNPINEFEPFFESLGLPPSELPLFLPRHLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 195

Query: 181 YKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSK 240
           YKEARE+FAYDYGLLASKLRAYEDLGLGMGT+IKLVSCCPSLLIGQIKMEFIKVLEKLSK
Sbjct: 196 YKEAREVFAYDYGLLASKLRAYEDLGLGMGTVIKLVSCCPSLLIGQIKMEFIKVLEKLSK 255

Query: 241 LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 300
           LGIEEDWIGGYISHKSTYNWNRLVDT+DFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY
Sbjct: 256 LGIEEDWIGGYISHKSTYNWNRLVDTVDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 315

Query: 301 VLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 360
           VLF RLVKLGLKM+EAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI
Sbjct: 316 VLFGRLVKLGLKMNEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 375

Query: 361 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEM 420
           LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLF LASKSKLKSSEQASCQNPAK+M
Sbjct: 376 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFALASKSKLKSSEQASCQNPAKQM 435

Query: 421 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 480
           EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL
Sbjct: 436 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 495

Query: 481 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 540
           NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCY MERINTRFSMYRWLRDKGAAKPNLS
Sbjct: 496 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYKMERINTRFSMYRWLRDKGAAKPNLS 555

Query: 541 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 579
           LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS
Sbjct: 556 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 594

[Close]

BLAST of Cp4.1LG20g05980 vs. ExPASy TrEMBL
Match: A0A6J1KND2 (transcription termination factor MTEF18, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111495068 PE=3 SV=1)

HSP 1 Score: 1135 bits (2937), Expect = 0.0
Identity = 557/579 (96.20%), Postives = 569/579 (98.27%), Query Frame = 0


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGG 60
           MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTT G
Sbjct: 16  MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTSG 75

Query: 61  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 120
           RVSR ARTEAQKVLFDYLHCTRSLGFADAE+ISKNSPHFLQ+LI+KLDSEKDVARSL KY
Sbjct: 76  RVSRNARTEAQKVLFDYLHCTRSLGFADAEYISKNSPHFLQDLILKLDSEKDVARSLTKY 135

Query: 121 LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 180
           LRYNPINEFEPFFESLGLPPSELP FLPR LMFLSDDHLMLENFHVLCNYGIPRSK+GKM
Sbjct: 136 LRYNPINEFEPFFESLGLPPSELPSFLPRHLMFLSDDHLMLENFHVLCNYGIPRSKIGKM 195

Query: 181 YKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSK 240
           YKEARE+FAYDYGLLASKLRAYEDLGLGMGT+IKLVSCCPSLLIGQIKMEF KVLEKLSK
Sbjct: 196 YKEAREVFAYDYGLLASKLRAYEDLGLGMGTVIKLVSCCPSLLIGQIKMEFFKVLEKLSK 255

Query: 241 LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 300
           LGIE+DWIGGYIS+KSTYNWNRLVDT+DFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY
Sbjct: 256 LGIEKDWIGGYISYKSTYNWNRLVDTVDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 315

Query: 301 VLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 360
           VLF RLVKLGLKMDEAYSIYKQNPVILSG YVKNILRAVDFLF+IGLGTEDIAGIVSHQI
Sbjct: 316 VLFGRLVKLGLKMDEAYSIYKQNPVILSGNYVKNILRAVDFLFEIGLGTEDIAGIVSHQI 375

Query: 361 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEM 420
           LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAK+M
Sbjct: 376 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKQM 435

Query: 421 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 480
           EKT FLLKLGYVENSDELAKA KQFRGRGDQLQERFDCLVNAGLDCHVVTNI+RHAPMVL
Sbjct: 436 EKTAFLLKLGYVENSDELAKALKQFRGRGDQLQERFDCLVNAGLDCHVVTNIIRHAPMVL 495

Query: 481 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 540
           NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS
Sbjct: 496 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 555

Query: 541 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 579
           LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS
Sbjct: 556 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 594

[Close]

BLAST of Cp4.1LG20g05980 vs. ExPASy TrEMBL
Match: A0A6J1CKT4 (transcription termination factor MTEF18, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111012532 PE=3 SV=1)

HSP 1 Score: 1001 bits (2588), Expect = 0.0
Identity = 488/579 (84.28%), Postives = 528/579 (91.19%), Query Frame = 0


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGG 60
           MI QLNHLL FAPV+SEK +T  +NPSFVSFKSR FCN G D  P+ASL+ES QSP T G
Sbjct: 16  MIAQLNHLLLFAPVVSEKVVT--YNPSFVSFKSRFFCNCGIDFQPKASLVESVQSPNTSG 75

Query: 61  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 120
           RVSR ARTEAQ VLFDYLHCTRSL F DAEHISKNSPHFLQNLI+KLD EKDVARSL KY
Sbjct: 76  RVSRIARTEAQDVLFDYLHCTRSLSFTDAEHISKNSPHFLQNLILKLDGEKDVARSLTKY 135

Query: 121 LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 180
           LRYNPINEFEPFFESLGLPPSELPLFLPR LMFLSDDHLMLENFHVLCNYGIPRSKMGKM
Sbjct: 136 LRYNPINEFEPFFESLGLPPSELPLFLPRHLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 195

Query: 181 YKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSK 240
           YKEA+EIF YDYGLLASKLRAYE+LGLG GT+IKLVSCCPSLL G+I MEF KVLEKLS+
Sbjct: 196 YKEAKEIFDYDYGLLASKLRAYENLGLGKGTVIKLVSCCPSLLXGRISMEFFKVLEKLSR 255

Query: 241 LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 300
           LGI +DWIGGYIS ++TYNWNR+++T+DFLAKVGYTEIQMH+LF+SNPSLLLEDSGKKVY
Sbjct: 256 LGIGKDWIGGYISCRNTYNWNRMLNTMDFLAKVGYTEIQMHNLFESNPSLLLEDSGKKVY 315

Query: 301 VLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 360
           VLF RLVKLGLKMDEAYS++ Q+P ILSGK+VKNILRA+DFLFD+GLGTEDI  IVSH I
Sbjct: 316 VLFGRLVKLGLKMDEAYSMFIQHPEILSGKFVKNILRAIDFLFDVGLGTEDITSIVSHHI 375

Query: 361 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEM 420
           LLLGSCTLKGP+TVCKELKVGKE LC IIRDDPSKLFTLASKSKLKSS Q SC +P K +
Sbjct: 376 LLLGSCTLKGPRTVCKELKVGKESLCXIIRDDPSKLFTLASKSKLKSSXQDSCPDPTKRL 435

Query: 421 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 480
           EKTTFLLKLGY+ENSDE+AKA K+FRGRGDQLQERFDCLV AGLDC+VVTNI+R APMVL
Sbjct: 436 EKTTFLLKLGYLENSDEMAKALKRFRGRGDQLQERFDCLVKAGLDCNVVTNIIRQAPMVL 495

Query: 481 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 540
           NQSKDVIQEKIDCLRNCLGYPL TI AFP YLCYNMERINTRFSMYRWLRDKG+AKPNLS
Sbjct: 496 NQSKDVIQEKIDCLRNCLGYPLDTIVAFPAYLCYNMERINTRFSMYRWLRDKGSAKPNLS 555

Query: 541 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKHGLHNHS 579
           LS+VL CSDARFVKYFVDVHPEG +MWE  K+H +HNH+
Sbjct: 556 LSSVLVCSDARFVKYFVDVHPEGHTMWEIFKRHRIHNHN 592

[Close]

BLAST of Cp4.1LG20g05980 vs. ExPASy TrEMBL
Match: A0A2N9ISM1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55025 PE=3 SV=1)

HSP 1 Score: 818 bits (2114), Expect = 8.24e-294
Identity = 400/573 (69.81%), Postives = 469/573 (81.85%), Query Frame = 0


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGG 60
           MI +LNH + F+PV  +K IT+  NPSF+ FK R F       HP+  + ES  S     
Sbjct: 1   MIAKLNHPVLFSPVGYDKVITK-QNPSFIFFKVRCFRTSTLTNHPKVIVTESALSSNFTP 60

Query: 61  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 120
           R SR A+ EAQ VLFDYLHCTRS  F DAEHISKNSPHFLQ L+ K+D++K VA SL K+
Sbjct: 61  RFSRLAKNEAQHVLFDYLHCTRSFSFMDAEHISKNSPHFLQILLSKVDTDKQVAHSLTKF 120

Query: 121 LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 180
           LRYNPINEFEPFFESLGL PSEL + LPR LMFLSDDH+ML+NFHVLCNYGIPRSKMGKM
Sbjct: 121 LRYNPINEFEPFFESLGLSPSELSMLLPRHLMFLSDDHVMLDNFHVLCNYGIPRSKMGKM 180

Query: 181 YKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSK 240
           YKEA+EIF YDYG+LA KL+AYE LGL   T+IKL+SCCPSLLIG +  EF+KVLE+L +
Sbjct: 181 YKEAKEIFGYDYGILALKLQAYEKLGLSKPTVIKLISCCPSLLIGGVNCEFVKVLERLKE 240

Query: 241 LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 300
           L  E DWIGGY+S KSTYNWNR++DT+ FL  VGY+E QM  LF +NP+LL E SGK VY
Sbjct: 241 LRFENDWIGGYLSGKSTYNWNRMLDTVIFLDTVGYSEEQMRYLFNTNPALLFEGSGKNVY 300

Query: 301 VLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 360
           VLF RL+K GLKM+E YS++ QNP ILS K +KN+LRAVDFL +I +GTE IA I+S+ I
Sbjct: 301 VLFGRLLKSGLKMNEIYSLFIQNPNILSVKCIKNLLRAVDFLLEIEMGTEYIASIISNHI 360

Query: 361 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEM 420
            LLGSCTLKGPKTVCKELKVG++GLC II++DP KLF LASKSK+KSSEQAS Q+P+K  
Sbjct: 361 QLLGSCTLKGPKTVCKELKVGRDGLCQIIKEDPLKLFNLASKSKIKSSEQASSQDPSKHQ 420

Query: 421 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 480
           EKTTFL++LGY+ENSDE+ KA KQFRGRGDQLQERFDCLV AGLDC+ VTN+V+ APMVL
Sbjct: 421 EKTTFLMRLGYMENSDEMMKALKQFRGRGDQLQERFDCLVQAGLDCNTVTNMVKQAPMVL 480

Query: 481 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 540
           NQ+KDVI++KIDCLRN L YPL ++ AFP YLCY+MERI+ RFSMY WLR++GAAKP LS
Sbjct: 481 NQTKDVIEKKIDCLRNYLAYPLESVVAFPAYLCYDMERISQRFSMYVWLRERGAAKPTLS 540

Query: 541 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKH 573
           LST+LACSD RFVKYFVDVHPEGP++WE  K H
Sbjct: 541 LSTILACSDTRFVKYFVDVHPEGPALWEKIKNH 572

[Close]

BLAST of Cp4.1LG20g05980 vs. ExPASy TrEMBL
Match: A0A2I4FW18 (transcription termination factor MTEF18, mitochondrial OS=Juglans regia OX=51240 GN=LOC109002514 PE=3 SV=1)

HSP 1 Score: 788 bits (2034), Expect = 1.94e-281
Identity = 382/573 (66.67%), Postives = 461/573 (80.45%), Query Frame = 0


Query: 1   MITQLNHLLFFAPVLSEKTITQAHNPSFVSFKSRLFCNYGFDIHPRASLIESPQSPTTGG 60
           MI +LN+ + F+P++  K  T   +PSF+S K R F  Y        S+ ES Q P    
Sbjct: 16  MIAKLNYHVLFSPIVYVKP-TAKQDPSFISLKVRCFSTYRLSNDANVSVTESSQLPNFTS 75

Query: 61  RVSRYARTEAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLDSEKDVARSLRKY 120
           RVSR ARTEA +VLFDYLHCTR   F DAEHISKNSPHFLQNL+ ++DSEKDVAR+L K+
Sbjct: 76  RVSRIARTEALEVLFDYLHCTRGFSFTDAEHISKNSPHFLQNLLSRIDSEKDVARNLTKF 135

Query: 121 LRYNPINEFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKM 180
           LRYNPINEFEPF ESLGL PSELP+FLPR LMFLSDD +ML+NFH LC+YGIPRS++GK+
Sbjct: 136 LRYNPINEFEPFLESLGLNPSELPMFLPRHLMFLSDDRVMLDNFHALCDYGIPRSRVGKL 195

Query: 181 YKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSK 240
           YKEA EIF YDYG+LA +L+AYE LGL    +IKL++CCPSLLIG +  EF+KVLE+  K
Sbjct: 196 YKEANEIFGYDYGILALRLQAYETLGLSRPIVIKLINCCPSLLIGGVNNEFVKVLERWKK 255

Query: 241 LGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVY 300
            G+E +WIGGY+S K TYNWNR++DT+DFL KVGY+E QM  LF SNPSLL E SGK +Y
Sbjct: 256 FGMENNWIGGYLSGKRTYNWNRMLDTMDFLDKVGYSEEQMRYLFNSNPSLLFEGSGKTIY 315

Query: 301 VLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQI 360
           +LF RL+KLGLKMDE YS++  NP ILSGK +KN+L+A+ FL ++G+  + IA I+S  I
Sbjct: 316 LLFGRLLKLGLKMDEIYSLFTHNPHILSGKRLKNLLQAMYFLLEVGMEPKYIASIISTHI 375

Query: 361 LLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQASCQNPAKEM 420
            LLGSCTLKGPKTVCKELKVG+  LC II++DP KLF+ ASKSK+K+SEQAS Q P+  +
Sbjct: 376 QLLGSCTLKGPKTVCKELKVGRYDLCQIIKEDPLKLFSKASKSKIKNSEQASSQYPSIHI 435

Query: 421 EKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVL 480
           EKTTFLL+LGY ENSDE+ KA KQFRGRGDQLQERFDCLV+AGLDC+VV  IV+ APM+L
Sbjct: 436 EKTTFLLRLGYTENSDEMMKALKQFRGRGDQLQERFDCLVDAGLDCNVVAKIVKQAPMIL 495

Query: 481 NQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLS 540
           NQ+K ++++KIDCLRN LGYPL ++ AFP YLCY+MERI  R SMY WLR++GAAKP LS
Sbjct: 496 NQTKAILEKKIDCLRNYLGYPLDSVVAFPAYLCYDMERIRRRLSMYVWLRERGAAKPTLS 555

Query: 541 LSTVLACSDARFVKYFVDVHPEGPSMWESCKKH 573
           LST+LACSDARFV+YFVDVH EGP+ WES K H
Sbjct: 556 LSTLLACSDARFVRYFVDVHLEGPATWESIKGH 587

[Close]

BLAST of Cp4.1LG20g05980 vs. TAIR 10
Match: AT4G19650.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 577.8 bits (1488), Expect = 9.8e-165
Identity = 280/481 (58.21%), Postives = 363/481 (75.47%), Query Frame = 0


Query: 90  EHISKNSPHFLQNLIMKL-DSEKDVARSLRKYLRYNPINEFEPFFESLGLPPSELPLFLP 149
           EHISKNSP F+  L+ K+ D++KDV++ L K+LRYNPINEFEPFFESLGL P E   FLP
Sbjct: 90  EHISKNSPCFMSTLLSKIDDNQKDVSKGLTKFLRYNPINEFEPFFESLGLCPYEFETFLP 149

Query: 150 RRLMFLSDDHLMLENFHVLCNYGIPRSKMGKMYKEAREIFAYDYGLLASKLRAYEDLGLG 209
           R+LMFLSDD +M ENFH LCNYGIPR K+G+MYKEAREIF Y+ G+LA KLR YE+LGL 
Sbjct: 150 RKLMFLSDDGIMFENFHALCNYGIPRGKIGRMYKEAREIFRYESGMLAMKLRGYENLGLS 209

Query: 210 MGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSKLGIEEDWIGGYISHKSTYNWNRLVDTLD 269
             T+IKLV+ CP LL+G I  EF  V++KL  L +  DW+G Y+S + TY+W R+++T++
Sbjct: 210 KATVIKLVTSCPLLLVGGIDAEFSSVVDKLKGLQVGCDWLGRYLSDRKTYSWRRILETIE 269

Query: 270 FLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFVRLVKLGLKMDEAYSIYKQNPVILS 329
           FL KVG  E ++  L K+ P+L++E SGKK YVLF RL K GL+++E Y ++  NP +LS
Sbjct: 270 FLDKVGCKEEKLSSLLKTYPALVIEGSGKKFYVLFGRLFKAGLQVNEIYRLFIDNPEMLS 329

Query: 330 GKYVKNILRAVDFLFDIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKEGLCLI 389
            K VKNI + +DFL  I + T+ I  I+   + L+GSC+L  P+T C  L V ++ LC I
Sbjct: 330 DKCVKNIQKTLDFLIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLNVKQDELCKI 389

Query: 390 IRDDPSKLFTLASKSKLKSSEQASCQNPAKEMEKTTFLLKLGYVENSDELAKASKQFRGR 449
           ++ +P +LF   S +K + S+  S ++  K +EKT FLL+LGYVENSDE+ KA KQFRGR
Sbjct: 390 LKKEPLRLFCFVSTTKKRKSKPLS-EDSRKYLEKTEFLLRLGYVENSDEMVKALKQFRGR 449

Query: 450 GDQLQERFDCLVNAGLDCHVVTNIVRHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAF 509
           GDQLQERFDCLV AGL+ +VVT I+RHAPM+LN SKDVI++KI  L   LGYP+ ++  F
Sbjct: 450 GDQLQERFDCLVKAGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLVRF 509

Query: 510 PVYLCYNMERINTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPEGPSMWE 569
           P YLCY+M+RI+ RFSMY WLR++ AAKP LS ST+L C DARFVKYFV+VHPEGP++WE
Sbjct: 510 PAYLCYDMQRIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAIWE 569

[Close]

BLAST of Cp4.1LG20g05980 vs. TAIR 10
Match: AT5G45113.1 (mitochondrial transcription termination factor-related / mTERF-related )

HSP 1 Score: 399.1 bits (1024), Expect = 6.3e-111
Identity = 197/413 (47.70%), Postives = 281/413 (68.04%), Query Frame = 0


Query: 160 MLENFHVLCNYGIPRSKMGKMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCC 219
           M ENFHVLC YGIPR K+G++YKEAREIF Y+ G+LASKL  YE L L    +IKLV+CC
Sbjct: 1   MFENFHVLCYYGIPRDKIGRLYKEAREIFVYENGVLASKLEPYEILVLRKAIVIKLVTCC 60

Query: 220 PSLLIGQIKMEFIKVLEKLSKLGIEEDWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQ 279
           P LL+G I  EF+ V+ KL  L +  DW+  Y+S + TYNW R+++T++ L KVG+ E +
Sbjct: 61  PLLLVGGIDCEFVSVVNKLKGLNLGCDWLARYLSVRKTYNWRRILETMELLEKVGFKEKK 120

Query: 280 MHDLFKSNPSLLLEDSGKKVYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAV 339
           + +L K+ P L+ E SG K Y++F +  K+GL+M+E   +   N  +L  K VK IL A+
Sbjct: 121 LSNLLKAYPDLVGETSGNKAYIMFEKFHKVGLQMNEIDKLLIDNSEMLLEKSVKRILEAL 180

Query: 340 DFLFDIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTL 399
            FL  I +  + +   +   +  + S +L  P+ V   LK+ ++ LC II+++P +LF++
Sbjct: 181 KFLKCIRIEKQFVVRFLQCHMKHICSSSLLVPRAVWNRLKIRRDELCQIIKEEPLRLFSI 240

Query: 400 ASKSKLKSSEQASCQNPAKEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCL 459
           ASK+     E  S    ++  EKTTFLLKLGYVENSDE+ +A K+F+GRGD+LQERFDC 
Sbjct: 241 ASKTNKGRIELDSLD--SRNAEKTTFLLKLGYVENSDEMVRALKKFQGRGDELQERFDCF 300

Query: 460 VNAGLDCHVVTNIVRHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMERI 519
           V AGLD +VV+ +V+ AP +LN+ KD+I++KI  L + L YP+ ++   P YLCY+M+RI
Sbjct: 301 VKAGLDYNVVSQLVKRAPHILNRPKDIIEKKIIMLIDYLVYPIESVIESPTYLCYSMKRI 360

Query: 520 NTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPEGPSMWESCKK 573
           + RF+MY WLR++ A  P L+L TV+  S+   V YFV+ HPEGP+ WE+ KK
Sbjct: 361 HQRFTMYIWLRERDAVIPRLTLGTVVGISNTLIVPYFVNTHPEGPATWENIKK 411

[Close]

BLAST of Cp4.1LG20g05980 vs. TAIR 10
Match: AT5G06810.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 396.0 bits (1016), Expect = 5.3e-110
Identity = 217/550 (39.45%), Postives = 319/550 (58.00%), Query Frame = 0


Query: 32   KSRLFCNYGFDIHPRASLIESPQSPTTGGRVSRYARTEAQKVLFDYLHCTRSLGFADAEH 91
            K +L  N  F    RA +         G R     R  AQ  +FDY + TR L F  AE 
Sbjct: 588  KPQLSRNPRFFATQRALVDAEVSGEKWGLRTRNEIRKVAQVAMFDYFYQTRGLQFLVAES 647

Query: 92   ISKNSPHFLQNLIMKL-------DSEKDVARSLRKYLRYNPINEFEPFFESLGLPPSELP 151
            +SKN+P F  NL+ KL       D + D+ +++ ++L ++P+NEFEPF ESLGL PSE  
Sbjct: 648  MSKNAPVFNDNLLKKLNGCDVDVDDDDDIVKAITRFLWFHPVNEFEPFLESLGLKPSEFS 707

Query: 152  LFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKMYKEAREIFAYDYGLLASKLRAYED 211
              +P   MFL++D  +LEN+HV  NYGI R KMGK++KEARE+F Y+ G+LASK+++YED
Sbjct: 708  HLIPCDKMFLNEDAFLLENYHVFWNYGIGREKMGKIFKEAREVFGYETGVLASKIKSYED 767

Query: 212  LGLGMGTLIKLVSCCPSLLIGQIKMEFIKVLEKLSKLGIEEDWIGGYISHKSTYNWNRLV 271
            LG     L KL+ C PS+LIG + +   KV+E L  +G   DW+   +S + +Y+W+ + 
Sbjct: 768  LGFSKLFLSKLIVCSPSILIGDMNVGLAKVMEMLKAIGFGVDWVTENLSEEVSYDWSSMH 827

Query: 272  DTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFVRLVKLGLKMDEAYSIYKQNP 331
              L FL  +   E ++ +L +  P L+ EDSG+   +L     KLG    E  S++++ P
Sbjct: 828  RCLSFLRDLYVDENELCELIRKMPRLIFEDSGEWTLILAGFEAKLGSSRSELSSLFQKFP 887

Query: 332  VILS-GKYVKNILRAVDFLFDIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKE 391
               S GK+V N+     FL DI +  ++I  I     L +G   LK   T+   LK GK 
Sbjct: 888  QCQSLGKFVLNLRHCFLFLKDIEMDDDEIGKIFRLHSLWIGVSRLKQTSTLLINLKGGKG 947

Query: 392  GLCLIIRDDPSKLFTLASKSKLKSSEQASCQ-NPAKEMEKTTFLLKLGYVENSDELAKAS 451
             LC +I+++P ++       +++       + N   +  KT FLL LGY ENS+E+ +A 
Sbjct: 948  RLCQVIQENPEEMKKWIMGLRVQPLPATGYKVNTKSKTMKTQFLLDLGYKENSEEMERAL 1007

Query: 452  KQFRGRGDQLQERFDCLVNAGLDCHVVTNIVRHAPMVLNQSKDVIQEKIDCLRNCLGYPL 511
            K FRG+G +L+ERF+ LV+ GL    V ++V+  P +L Q+ D+++ K++ L   LGYPL
Sbjct: 1008 KNFRGKGSELRERFNVLVSFGLTEKDVKDMVKACPSILTQACDILESKVNYLVKELGYPL 1067

Query: 512  HTIAAFPVYLCYNMERINTRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPE 571
             T+  FP  L Y ++R+  RFSM+ WL+D+G A P L +ST+L CSD  F   FV+ HP+
Sbjct: 1068 STLVTFPTCLKYTLQRMKLRFSMFSWLQDRGKADPKLQVSTILVCSDKFFATRFVNRHPD 1127

Query: 572  GPSMWESCKK 573
            GP   E  KK
Sbjct: 1128 GPKHLEDLKK 1137

[Close]

BLAST of Cp4.1LG20g05980 vs. TAIR 10
Match: AT3G60400.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 233.8 bits (595), Expect = 3.5e-61
Identity = 151/515 (29.32%), Postives = 262/515 (50.87%), Query Frame = 0


Query: 69  EAQKVLFDYLHCTRSLGFADAEHISKNSPHFLQNLIMKLD-SEKDVARSLRKYLRYNPIN 128
           +AQ+ + DYLH TRSL +  AE I+ N+   ++NLI+KLD S    ++SLRK+L Y+PIN
Sbjct: 36  KAQQAITDYLHTTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKSLRKHLSYHPIN 95

Query: 129 EFEPFFESLGLPPSELPLFLPRRLMFLSDDHLMLENFHVLCNYGIPRSKMGKMYKEAREI 188
           EFE FFES+G+  SE+  FLP +  F S+D  +L+    L  +G P +K+GK+YKE R +
Sbjct: 96  EFEFFFESIGIDYSEVSEFLPEKKFFFSEDRTVLDAAFALSGFGFPWNKLGKLYKEERLV 155

Query: 189 FAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLI--GQIKMEFIKVLEKLSKLGIEE 248
           F    G + S+L  ++D+G     +I      P  L   G++  E   +  KL +L  E 
Sbjct: 156 FVQRPGEIESRLLKFKDIGFSTVAVIGTCLAIPRTLCGGGELGSEIRCLFVKLKRLFDEF 215

Query: 249 DWIGGYISHKSTYNWNRLVDTLDFLAKVGYTEIQMHDLFKSNPSLLLEDSGKKVYVLFVR 308
           D    ++  ++  +W  +   +     +G    +M +L   N SL LE S + +      
Sbjct: 216 D--SHHLFEENVDSWLAVSRKIRIFYDLGCENEEMWELMCRNKSLFLEYSEEALMNKAGY 275

Query: 309 LVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDFLFDIGLGTEDIAGIVSHQILLLGS 368
             + G+  ++A  +  +NP I++    K ++     L   GL  +++  +      + G 
Sbjct: 276 FCRFGVSKEDAALLILRNPAIMNFDLEKPVISVTGMLKHFGLRQDEVDAVAQKYPYVFGR 335

Query: 369 CTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLASKSKLKSSEQ------------ASC 428
             LK    V + + +  E +  I+++    L  LAS + +   E              + 
Sbjct: 336 NQLKNLPYVLRAIDL-HERIFDILKNGNHHL--LASYTLMDPDEDLEREYQEGLEELQNS 395

Query: 429 QNPAKEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVNAGLDCHVVTNIV 488
           +     ++K  FL ++G+ EN   + K  +   G   +L +RF  L+N+G+    +  ++
Sbjct: 396 RTKRHNIQKLDFLHEIGFGENGITM-KVLQHVHGTAVELHDRFQILLNSGIIFSKICMLI 455

Query: 489 RHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNME-RINTRFSMYRWLRDK 548
           R AP +LNQ    IQ+K+  L   +G  L  +  FP YLC+++E RI+ RF  ++WL +K
Sbjct: 456 RSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLEVFPAYLCFDLENRISPRFRFHKWLVEK 515

Query: 549 GAAKPNLSLSTVLACSDARFVKYFVDVHPEGPSMW 568
           G ++ + S+++++A S+  F+     +HP  P  W
Sbjct: 516 GFSEKSYSIASIVATSEKAFIARLYGIHPAIPKHW 544

[Close]

BLAST of Cp4.1LG20g05980 vs. TAIR 10
Match: AT1G74120.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 63.9 bits (154), Expect = 4.8e-10
Identity = 80/402 (19.90%), Postives = 159/402 (39.55%), Query Frame = 0


Query: 165 HVLCNYGIPRSKMGKMYKEAREIFAYDYGLLASKLRAYEDLGLGMGTLIKLVSCCPSLLI 224
           ++L  YG P S +         +   D       L     L +   +L+ L+S CP++L 
Sbjct: 46  NLLQRYGFPPSSLQHFLSRNNHLLNSDLVETEISLGILLSLKIPQKSLVSLISDCPNVLR 105

Query: 225 GQIKMEFIKVLEKLSKLG-IEEDWIGGYISHKSTYNW--NRLVDTLDFLAKVGYTEIQMH 284
            +   ++   L    K G +    I   + H S      ++  + +  L  +G+ +  + 
Sbjct: 106 SEFLRKWRVPLSNCGKHGVVSSSAIKSVLEHSSRIGIGPDKFNECVRVLKSLGFCDSTVS 165

Query: 285 DLFKSNPSLLLEDSGKKVYVLFVRLVKLGLKMDEAYSIYKQNPVILSGKYVKNILRAVDF 344
            +  S P +LL +   ++      LV +G+  D     +   P +L       +   +D 
Sbjct: 166 RILSSFPGVLLVNE-IEIRRKIEFLVGIGIARDNIERFFHVFPEVLGIGTETRLKPLLDE 225

Query: 345 LFDIGLGTEDIAGIVSHQILLLGSCTLKGPKTVCKELKVGKEGLCLIIRDDPSKLFTLAS 404
              +G   +D+   ++ +  +LG             L++G+   CL +      + TL  
Sbjct: 226 FMKMGFSKDDVKKEIAREPRVLG-------------LELGELPRCLEL------INTLKC 285

Query: 405 KSKLKSSEQASCQNPAKEMEKTTFLLKLGYVENSDELAKASKQFRGRGDQLQERFDCLVN 464
           +  ++ S                 ++  G              FR  G +++ R DCL  
Sbjct: 286 REVIRVS-----------------IISEG-------------AFRA-GFEVKLRVDCLCK 345

Query: 465 AGLDCHVVTNIVRHAPMVLNQSKDVIQEKIDCLRNCLGYPLHTIAAFPVYLCYNMER-IN 524
            GL       +V   P V+    + I++KI+ L N +G+ ++ +A  P YL  N+++ I 
Sbjct: 346 YGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIV 396

Query: 525 TRFSMYRWLRDKGAAKPNLSLSTVLACSDARFVKYFVDVHPE 563
            R+++  +L+ KG    ++ L  ++  S  RF   +V  +PE
Sbjct: 406 PRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPYPE 396

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g05980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M219	4.9e-60	29.32	Transcription termination factor MTEF18, mitochondrial OS=Arabidopsis thaliana O...	[more]
Q9C6A1	6.7e-09	19.90	Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana ...	[more]

BLAST of Cp4.1LG20g05980 vs. NCBI nr


Match Name	Identity	Description
XP_023519412.1	100.00	transcription termination factor MTEF18, mitochondrial-like [Cucurbita pepo subs...	[more]
KAG7019433.1	98.79	Transcription termination factor MTEF18, mitochondrial, partial [Cucurbita argyr...	[more]
KAG6583809.1	98.45	Transcription termination factor MTEF18, mitochondrial, partial [Cucurbita argyr...	[more]
XP_022927279.1	97.93	transcription termination factor MTEF18, mitochondrial-like [Cucurbita moschata]	[more]
XP_023000703.1	96.20	transcription termination factor MTEF18, mitochondrial-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG20g05980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHL0	0.0	97.93	transcription termination factor MTEF18, mitochondrial-like OS=Cucurbita moschat...	[more]
A0A6J1KND2	0.0	96.20	transcription termination factor MTEF18, mitochondrial-like OS=Cucurbita maxima ...	[more]
A0A6J1CKT4	0.0	84.28	transcription termination factor MTEF18, mitochondrial OS=Momordica charantia OX...	[more]
A0A2N9ISM1	8.24e-294	69.81	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55025 PE=3 SV=1	[more]
A0A2I4FW18	1.94e-281	66.67	transcription termination factor MTEF18, mitochondrial OS=Juglans regia OX=51240...	[more]

BLAST of Cp4.1LG20g05980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G19650.1	9.8e-165	58.21	Mitochondrial transcription termination factor family protein	[more]
AT5G45113.1	6.3e-111	47.70	mitochondrial transcription termination factor-related / mTERF-related	[more]
AT5G06810.1	5.3e-110	39.45	Mitochondrial transcription termination factor family protein	[more]
AT3G60400.1	3.5e-61	29.32	Mitochondrial transcription termination factor family protein	[more]
AT1G74120.1	4.8e-10	19.90	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 317..348 e-value: 1600.0 score: 2.4 coord: 213..244 e-value: 110.0 score: 11.2 coord: 178..208 e-value: 380.0 score: 7.1 coord: 470..501 e-value: 23.0 score: 13.9 coord: 502..535 e-value: 210.0 score: 9.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 450..552 e-value: 5.5E-14 score: 51.8 coord: 238..358 e-value: 2.4E-8 score: 33.3 coord: 267..405 e-value: 1.8E-8 score: 33.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 53..572
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 93..298 e-value: 6.0E-12 score: 47.2
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 299..568 e-value: 5.3E-49 score: 168.7
None	No IPR available	PANTHER	PTHR13068:SF103	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN	coord: 53..572

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g05980.1	Cp4.1LG20g05980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0032502	developmental process
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003690	double-stranded DNA binding