Homology
BLAST of Cp4.1LG20g05810 vs. ExPASy Swiss-Prot
Match:
Q9SA76 (Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2279 PE=3 SV=1)
HSP 1 Score: 728.4 bits (1879), Expect = 1.0e-208
Identity = 414/861 (48.08%), Postives = 561/861 (65.16%), Query Frame = 0
Query: 62 GHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNKM 121
G A+K S GES + + + F+ + S EY R ++ R + D+ + +
Sbjct: 172 GESSVALKLSKSGESSVTVPE----DESFRKRYSKQEYHRSSDTSRGIERGSRGDELDLV 231
Query: 122 KENASAKSAESTSISNIVTDVQGNMDVKKKVICVDQEDLFDNSERITRKIDLSGNKFDSK 181
E + I D + + ++ + V + ++S +T D S + SK
Sbjct: 232 --------VEERRVQRIAKDARWSKS-RESSVAVKWSNSGESS--VTMPKDESFRRRYSK 291
Query: 182 RKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHDKRLHFKANTLD 241
++ RS D +G S+ ++ + V + E +V R D R +L
Sbjct: 292 QEH-HRSSDTSRGIAR--GSKGDELELVVE---------ERRVQRIAKDVRWSKSDESLV 351
Query: 242 VKSESHGVRYGSSMKISEKIWADDDTKRTKDVLKVGKYGVQLEGNYIPGDKVGRKKTE-- 301
SE R G+ + + DT R + G G+ L +++ ++ E
Sbjct: 352 PVSEDESFRRGNPKQEMVRYQRVSDTSRGIERGSKGD-GLDLLAEERRIERLANERHEIR 411
Query: 302 -QSYRGLSKSGKQFHEFTEESSLEVEHAAFN-SCDAEDIMDKPRVSKMEMEERIQMLSKR 361
G + G + ++ ++S +E AF S ++ DI+DKP S++EME+RI+ L+K
Sbjct: 412 SSKLSGTRRIGAKRNDDDDDSLFAMETPAFRFSDESSDIVDKPATSRVEMEDRIEKLAKV 471
Query: 362 LNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKS 421
LNGADI+MPEW F++ +RSAKIRY+D++++R+I LGKLGNW+RVLQVIEWLQ ++R+KS
Sbjct: 472 LNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQRQDRYKS 531
Query: 422 HKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELF 481
+K+R IYTTAL+VLGK+RRPVEALNVFHAM SSYPD+VAY SIAVTLGQAG+++ELF
Sbjct: 532 NKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELF 591
Query: 482 DVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQG 541
VID+MRSPPKKKFK LEKWDPRL+PD+V+YNAVLNACV+RK WEGAFWVLQ+LK++G
Sbjct: 592 YVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRG 651
Query: 542 LQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVL 601
+PS TYGL+MEVML C KYNLVHEFFRK+QKSSIPNAL Y+VLVNTLWKEGK+DEAV
Sbjct: 652 QKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVH 711
Query: 602 AIQTMEKRGIVGSAALYYDFARCLCSAGRCKEAL-------------------------- 661
++ ME RGIVGSAALYYD ARCLCSAGRC E L
Sbjct: 712 TVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHT 771
Query: 662 --MQMEKICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKG 721
Q++KIC+VANKPLVVTYTGLIQAC+DS N+++A YIF+ MK CSPNLVTCNI+LK
Sbjct: 772 IQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKA 831
Query: 722 YLDHGMFDEAKELFQNMSENGRNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHF 781
YL G+F+EA+ELFQ MSE+G +I SD+ RVLPD YTFNTMLD +++WDDF +
Sbjct: 832 YLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYA 891
Query: 782 YNQMLLYGYHFNPKRHLRMIMEAARGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLA 841
Y +ML +GYHFN KRHLRM++EA+R GK+E++E TW+H+ +++R P PLIKERF L
Sbjct: 892 YREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLE 951
Query: 842 RGDYSEALSCIS----KHHSSDEHHFSKSAWLNLLKEKRFPKDSVIELIHKVSMLL-ARN 886
+GD+ A+S ++ K ++ FS SAW +L RF +DSV+ L+ V+ L +R+
Sbjct: 952 KGDHISAISSLADLNGKIEETELRAFSTSAWSRVL--SRFEQDSVLRLMDDVNRRLGSRS 1002
BLAST of Cp4.1LG20g05810 vs. ExPASy Swiss-Prot
Match:
Q9FJW6 (Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DG1 PE=1 SV=2)
HSP 1 Score: 410.2 bits (1053), Expect = 6.0e-113
Identity = 221/557 (39.68%), Postives = 339/557 (60.86%), Query Frame = 0
Query: 349 ERIQMLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEW 408
E +++L RL+G +I+ W F +MM + +++++ +L+++ LG+ +WK+ V+ W
Sbjct: 183 EAVRVLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHW 242
Query: 409 LQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLG 468
+ ++ K + RF+YT L VLG ARRP EAL +F+ M YPD+ AYH IAVTLG
Sbjct: 243 VYSDKKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLG 302
Query: 469 QAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFW 528
QAG ++EL VI+ MR P K K + WDP L+PD+V+YNA+LNACV W+ W
Sbjct: 303 QAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSW 362
Query: 529 VLQELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKS-SIPNALTYKVLVNTLW 588
V EL++ GL+P+ TYGL MEVML+ GK++ VH+FFRK++ S P A+TYKVLV LW
Sbjct: 363 VFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALW 422
Query: 589 KEGKTDEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVAN-KPLV 648
+EGK +EAV A++ ME++G++G+ ++YY+ A CLC+ GR +A++++ ++ ++ N +PL
Sbjct: 423 REGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLE 482
Query: 649 VTYTGLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNM 708
+T+TGLI A L+ ++ + IF +MK C PN+ T N++LK Y + MF EAKELF+ +
Sbjct: 483 ITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEI 542
Query: 709 SENGRNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHL 768
VS ++P+ YT++ ML+AS +W+ F H Y M+L GY + +H
Sbjct: 543 ---------VSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHA 602
Query: 769 RMIMEAARGGKDELLETTWKHLAQADRTLPPPL-IKERFCIMLARGDYSEALSCISKHHS 828
M++EA+R GK LLE + + + D +P PL E C A+GD+ A++ I+ +
Sbjct: 603 SMLIEASRAGKWSLLEHAFDAVLE-DGEIPHPLFFTELLCHATAKGDFQRAITLINT-VA 662
Query: 829 SDEHHFSKSAWLNLLKEKR--FPKDSVIELIHKVSMLLARND-SPNPVLQNLLLSGKEFC 888
S+ W +L +E + +D+ +HK+S L D P + NL S K C
Sbjct: 663 LASFQISEEEWTDLFEEHQDWLTQDN----LHKLSDHLIECDYVSEPTVSNLSKSLKSRC 722
Query: 889 RSRISVADPRLEEVVCT 900
S S A P L V T
Sbjct: 723 GSSSSSAQPLLAVDVTT 724
BLAST of Cp4.1LG20g05810 vs. ExPASy Swiss-Prot
Match:
Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 7.5e-23
Identity = 103/477 (21.59%), Postives = 198/477 (41.51%), Query Frame = 0
Query: 354 LSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRE 413
LS L G D +F M++S + + R+ + K ++ VL + + QM
Sbjct: 60 LSSGLVGIKADDAVDLFRDMIQSRPLP-TVIDFNRLFSAIAKTKQYELVLALCK--QMES 119
Query: 414 RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 473
+ +H + + + ++ + R+ A + + + PD V ++++ L +
Sbjct: 120 KGIAHSI-YTLSIMINCFCRCRKLSYAFSTMGKIMK-LGYEPDTVIFNTLLNGLCLECRV 179
Query: 474 RELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQEL 533
E +++D M K P ++ N ++N A ++ +
Sbjct: 180 SEALELVDRMVEMGHK---------------PTLITLNTLVNGLCLNGKVSDAVVLIDRM 239
Query: 534 KEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIP-NALTYKVLVNTLWKEGKT 593
E G QP+ TYG V+ VM + G+ L E RK+++ +I +A+ Y ++++ L K+G
Sbjct: 240 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 299
Query: 594 DEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGL 653
D A ME +G Y C+AGR + + + K P VVT++ L
Sbjct: 300 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 359
Query: 654 IQACLDSKNLQSAVYIFNH-MKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGR 713
I + + L+ A + M+ +PN +T N L+ G+ +EA ++ M G
Sbjct: 360 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 419
Query: 714 NISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIME 773
+ PDI TFN +++ R DD + +M L G N + ++
Sbjct: 420 D------------PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 479
Query: 774 AARGGKDELLETTWKHLAQADRTLPPPLIKERFCI--MLARGDYSEALSCISKHHSS 827
+ GK E+ + ++ + R + P ++ + + + G+ +AL K S
Sbjct: 480 FCQSGKLEVAKKLFQEM--VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
BLAST of Cp4.1LG20g05810 vs. ExPASy Swiss-Prot
Match:
Q0WPZ6 (Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX=3702 GN=At2g17140 PE=2 SV=1)
HSP 1 Score: 107.8 bits (268), Expect = 6.4e-22
Identity = 58/215 (26.98%), Postives = 107/215 (49.77%), Query Frame = 0
Query: 501 PRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQPSTTTYGLVMEVMLQCGKYNL 560
P +P + +YN +L +C+K + E W+ +++ G+ P T T+ L++ + +
Sbjct: 106 PENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDA 165
Query: 561 VHEFFRKV-QKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQTMEKRGIVGSAALYYDFAR 620
E F ++ +K PN T+ +LV K G TD+ + + ME G++ + +Y
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 621 CLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHMK-----A 680
C GR ++ +EK+ + P +VT+ I A + A IF+ M+
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 681 FCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSEN 710
PN +T N++LKG+ G+ ++AK LF+++ EN
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320
BLAST of Cp4.1LG20g05810 vs. ExPASy Swiss-Prot
Match:
Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)
HSP 1 Score: 107.1 bits (266), Expect = 1.1e-21
Identity = 79/321 (24.61%), Postives = 140/321 (43.61%), Query Frame = 0
Query: 424 YTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVIDSM 483
Y+ +D L K R +EA +F +M + P++ Y ++ G + E+ ++D M
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKR-GLKPEITTYGTLLQGYATKGALVEMHGLLDLM 363
Query: 484 RSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQPSTT 543
+ G + PD +++ ++ A K+ + A V ++++QGL P+
Sbjct: 364 -------VRNG--------IHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAV 423
Query: 544 TYGLVMEVMLQCGKYNLVHEFFRK-VQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQTM 603
TYG V+ ++ + G+ +F + + + P + Y L++ L K + A I M
Sbjct: 424 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 483
Query: 604 EKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQA-CLDSKN 663
RGI + + C GR E+ E + ++ KP V+TY LI CL K
Sbjct: 484 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 543
Query: 664 LQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYRD 723
++ + + PN VT + L+ GY ++A LF+ M +G
Sbjct: 544 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG----------- 596
Query: 724 RVLPDIYTFNTMLDASFAEKR 743
V PDI T+N +L F +R
Sbjct: 604 -VSPDIITYNIILQGLFQTRR 596
BLAST of Cp4.1LG20g05810 vs. NCBI nr
Match:
XP_023519692.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1822 bits (4719), Expect = 0.0
Identity = 910/910 (100.00%), Postives = 910/910 (100.00%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALHCTQNSHYLLGFSFFTSSVSGSGLNSGSAKSRVLRH 60
MVGVIMANANLCIPCCEGNGFPALHCTQNSHYLLGFSFFTSSVSGSGLNSGSAKSRVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFPALHCTQNSHYLLGFSFFTSSVSGSGLNSGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RGHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK
Sbjct: 61 RGHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 MKENASAKSAESTSISNIVTDVQGNMDVKKKVICVDQEDLFDNSERITRKIDLSGNKFDS 180
MKENASAKSAESTSISNIVTDVQGNMDVKKKVICVDQEDLFDNSERITRKIDLSGNKFDS
Sbjct: 121 MKENASAKSAESTSISNIVTDVQGNMDVKKKVICVDQEDLFDNSERITRKIDLSGNKFDS 180
Query: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHDKRLHFKANTL 240
KRKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHDKRLHFKANTL
Sbjct: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHDKRLHFKANTL 240
Query: 241 DVKSESHGVRYGSSMKISEKIWADDDTKRTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
DVKSESHGVRYGSSMKISEKIWADDDTKRTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ
Sbjct: 241 DVKSESHGVRYGSSMKISEKIWADDDTKRTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
Query: 301 SYRGLSKSGKQFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
SYRGLSKSGKQFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLSKRLNG
Sbjct: 301 SYRGLSKSGKQFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
Query: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL
Sbjct: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
Query: 421 RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI
Sbjct: 421 RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
Query: 481 DSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
DSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP
Sbjct: 481 DSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
Query: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ
Sbjct: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
Query: 601 TMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
TMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSK
Sbjct: 601 TMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
Query: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR
Sbjct: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
Query: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL
Sbjct: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
Query: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL
Sbjct: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
Query: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN
Sbjct: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
Query: 901 EFQSAAVMHV 910
EFQSAAVMHV
Sbjct: 901 EFQSAAVMHV 910
BLAST of Cp4.1LG20g05810 vs. NCBI nr
Match:
KAG7019446.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1779 bits (4609), Expect = 0.0
Identity = 888/910 (97.58%), Postives = 897/910 (98.57%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALHCTQNSHYLLGFSFFTSSVSGSGLNSGSAKSRVLRH 60
MVGVIMANANLCIPCCEGNGFPAL+CTQNSHYLLGFSFF SSVSGSGLN GSAKSRVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RGHKCGAIKASSKGESDI+LASGNLLE DFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 MKENASAKSAESTSISNIVTDVQGNMDVKKKVICVDQEDLFDNSERITRKIDLSGNKFDS 180
MKENASAKSAESTSISNIVTDVQGNMDVK KV+CVD EDLFDNSE+ITRK DLSGNKFDS
Sbjct: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS 180
Query: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHDKRLHFKANTL 240
KRKGVTRSKDELKGKVTPFDSQVNDKQH EKRNGNWSNYIEPK TRSNHDKRLHFKANTL
Sbjct: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
Query: 241 DVKSESHGVRYGSSMKISEKIWADDDTKRTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
DVKSESHGVRYGSSMKIS+KIWADDDTK TKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ
Sbjct: 241 DVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
Query: 301 SYRGLSKSGKQFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
SYRGLSKSGK+FHEFTEESSLEVEHAAFNS DAEDIMDKPRVSKMEMEERIQMLSKRLNG
Sbjct: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSFDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
Query: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL
Sbjct: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
Query: 421 RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
RFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQAGYMRELFDVI
Sbjct: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
Query: 481 DSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
DSMRSPPKKKFKTGA EKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP
Sbjct: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
Query: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ
Sbjct: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
Query: 601 TMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
TMEKRGIVGSAALYYDFARCLCSAGRC+EALMQMEKICKVANKPLVVTYTGLIQACLDSK
Sbjct: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
Query: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR
Sbjct: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
Query: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL
Sbjct: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
Query: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL
Sbjct: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
Query: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRI+VADPRLEEVVCTN
Sbjct: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRITVADPRLEEVVCTN 900
Query: 901 EFQSAAVMHV 910
E QSA VMHV
Sbjct: 901 ESQSATVMHV 910
BLAST of Cp4.1LG20g05810 vs. NCBI nr
Match:
XP_022927392.1 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucurbita moschata])
HSP 1 Score: 1775 bits (4597), Expect = 0.0
Identity = 885/910 (97.25%), Postives = 895/910 (98.35%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALHCTQNSHYLLGFSFFTSSVSGSGLNSGSAKSRVLRH 60
MVGVIMANANLCIPCCEGNGFPAL+CTQNSHYLLGFS F SSVSGSGLN GSAKSRVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSVFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RGHKCGAIKASSKGESDI+LASGNLLE DFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 MKENASAKSAESTSISNIVTDVQGNMDVKKKVICVDQEDLFDNSERITRKIDLSGNKFDS 180
MKENASAKSAEST ISNIVTDVQGNMDVK KV+CVD EDLFDNSE+ITRK DLSGNKFDS
Sbjct: 121 MKENASAKSAESTFISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS 180
Query: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHDKRLHFKANTL 240
KRKGVTRSKDELKGKVTPF+SQVNDKQH EKRNGNWSNYIEPK TRSNHDKRLHFKANTL
Sbjct: 181 KRKGVTRSKDELKGKVTPFESQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
Query: 241 DVKSESHGVRYGSSMKISEKIWADDDTKRTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
DVKSESHGVRYGSSMKIS+KIWADDD+K TKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ
Sbjct: 241 DVKSESHGVRYGSSMKISDKIWADDDSKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
Query: 301 SYRGLSKSGKQFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
SYRGLSKSGK+FHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLS RLNG
Sbjct: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLSNRLNG 360
Query: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL
Sbjct: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
Query: 421 RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
RFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQAGYMRELFDVI
Sbjct: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
Query: 481 DSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
DSMRSPPKKKFKTGA EKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP
Sbjct: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
Query: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ
Sbjct: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
Query: 601 TMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
TMEKRGIVGSAALYYDFARCLCSAGRC+EALMQMEKICKVANKPLVVTYTGLIQACLDSK
Sbjct: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
Query: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR
Sbjct: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
Query: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL
Sbjct: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
Query: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL
Sbjct: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
Query: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN
Sbjct: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
Query: 901 EFQSAAVMHV 910
E QSA VMHV
Sbjct: 901 ESQSATVMHV 910
BLAST of Cp4.1LG20g05810 vs. NCBI nr
Match:
XP_023000737.1 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucurbita maxima])
HSP 1 Score: 1764 bits (4570), Expect = 0.0
Identity = 883/910 (97.03%), Postives = 893/910 (98.13%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALHCTQNSHYLLGFSFFTSSVSGSGLNSGSAKSRVLRH 60
MVGVIMANANLCIPCCEGNGF AL+CTQNSHYLLG SFF SSVSGSGLN GSAKSRVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFSALYCTQNSHYLLGLSFFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RGHKCGAIKASSKGESDI+LASGNLLE DFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 MKENASAKSAESTSISNIVTDVQGNMDVKKKVICVDQEDLFDNSERITRKIDLSGNKFDS 180
MKENASAKSAESTSISNIVTDVQGNMDVK KV+ VD EDLFDNSERITRK DLSGNKFDS
Sbjct: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVYVDGEDLFDNSERITRKTDLSGNKFDS 180
Query: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHDKRLHFKANTL 240
KRKGVTRSKDELKGKVTPFDSQ+NDKQH EKRNGNWSNYIEPKVTRSNHDKRLHFKANTL
Sbjct: 181 KRKGVTRSKDELKGKVTPFDSQINDKQHEEKRNGNWSNYIEPKVTRSNHDKRLHFKANTL 240
Query: 241 DVKSESHGVRYGSSMKISEKIWADDDTKRTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
DVKSESHGVRYGSSMKISEKIWADDD K TKDVLKVGKYGVQL+GNYIPGDKVGRKKTEQ
Sbjct: 241 DVKSESHGVRYGSSMKISEKIWADDDIKPTKDVLKVGKYGVQLKGNYIPGDKVGRKKTEQ 300
Query: 301 SYRGLSKSGKQFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
SYRGLSKSGK+FHEFTEESSLEVEHAAFNSCDA DIMDKPRVSKMEMEERIQMLSKRLNG
Sbjct: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSCDAADIMDKPRVSKMEMEERIQMLSKRLNG 360
Query: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL
Sbjct: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
Query: 421 RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
RFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQAGYMRELFDVI
Sbjct: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
Query: 481 DSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
DSMRSPPKKKFKTGA EKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP
Sbjct: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
Query: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ
Sbjct: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
Query: 601 TMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
TMEKRGIVGSAALYYDFARCLCSAGR +EALMQMEKICKVANKPLVVTYTGLIQACLDSK
Sbjct: 601 TMEKRGIVGSAALYYDFARCLCSAGRWEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
Query: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMF+EAKELFQNMSENGRNISAVSDYR
Sbjct: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFNEAKELFQNMSENGRNISAVSDYR 720
Query: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL
Sbjct: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
Query: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
LETTWKHLAQADR LPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL
Sbjct: 781 LETTWKHLAQADRILPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
Query: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
KEKRFPKDSVI+LIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN
Sbjct: 841 KEKRFPKDSVIQLIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
Query: 901 EFQSAAVMHV 910
E QSAAVMHV
Sbjct: 901 ESQSAAVMHV 910
BLAST of Cp4.1LG20g05810 vs. NCBI nr
Match:
KAG6583820.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1651 bits (4276), Expect = 0.0
Identity = 832/877 (94.87%), Postives = 839/877 (95.67%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALHCTQNSHYLLGFSFFTSSVSGSGLNSGSAKSRVLRH 60
MVGVIMANANLCIPCCEGNGFPAL+CTQNSHYLLGFSFF SSVSGSGLN GSAKSRVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSFFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RGHKCGAIKASSKGESDI+LASGNLLE DFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 MKENASAKSAESTSISNIVTDVQGNMDVKKKVICVDQEDLFDNSERITRKIDLSGNKFDS 180
MKENASAKSAESTSISNIVTDVQGNMDVK KV+CVD EDLFDNSE+I RK DLSGNKFDS
Sbjct: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKIPRKTDLSGNKFDS 180
Query: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHDKRLHFKANTL 240
KRKGVTRSKDELKGKVTPFDSQVNDKQH EKRNGNWSNYIEPK TRSNHDKRLHFKANTL
Sbjct: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
Query: 241 DVKSESHGVRYGSSMKISEKIWADDDTKRTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
DVKSESHGVRYGSSMKIS+KIWADDDTK TKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ
Sbjct: 241 DVKSESHGVRYGSSMKISDKIWADDDTKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
Query: 301 SYRGLSKSGKQFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
SYRGLSKS EDIMDKPRVSKMEMEERIQMLSKRLNG
Sbjct: 301 SYRGLSKS-------------------------EDIMDKPRVSKMEMEERIQMLSKRLNG 360
Query: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL
Sbjct: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
Query: 421 RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
RFIYTTALDVLGKARRPVEALNVFHAMQ+ FSSYPDLVAYHSIAVTLGQAGYMRELFDVI
Sbjct: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQQFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
Query: 481 DSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
DSMRSPPKKKFKTGA EKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP
Sbjct: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
Query: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ
Sbjct: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
Query: 601 TMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
TMEKRGIVGSAALYYDFARCLCSAGRC+EALMQMEKICKVANKPLVVTYTGLIQACLDSK
Sbjct: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
Query: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR
Sbjct: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
Query: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL
Sbjct: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
Query: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSA LNLL
Sbjct: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSACLNLL 840
Query: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLS 877
KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLS
Sbjct: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLS 852
BLAST of Cp4.1LG20g05810 vs. ExPASy TrEMBL
Match:
A0A6J1EH18 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434226 PE=4 SV=1)
HSP 1 Score: 1775 bits (4597), Expect = 0.0
Identity = 885/910 (97.25%), Postives = 895/910 (98.35%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALHCTQNSHYLLGFSFFTSSVSGSGLNSGSAKSRVLRH 60
MVGVIMANANLCIPCCEGNGFPAL+CTQNSHYLLGFS F SSVSGSGLN GSAKSRVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFPALYCTQNSHYLLGFSVFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RGHKCGAIKASSKGESDI+LASGNLLE DFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 MKENASAKSAESTSISNIVTDVQGNMDVKKKVICVDQEDLFDNSERITRKIDLSGNKFDS 180
MKENASAKSAEST ISNIVTDVQGNMDVK KV+CVD EDLFDNSE+ITRK DLSGNKFDS
Sbjct: 121 MKENASAKSAESTFISNIVTDVQGNMDVKNKVVCVDGEDLFDNSEKITRKTDLSGNKFDS 180
Query: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHDKRLHFKANTL 240
KRKGVTRSKDELKGKVTPF+SQVNDKQH EKRNGNWSNYIEPK TRSNHDKRLHFKANTL
Sbjct: 181 KRKGVTRSKDELKGKVTPFESQVNDKQHEEKRNGNWSNYIEPKATRSNHDKRLHFKANTL 240
Query: 241 DVKSESHGVRYGSSMKISEKIWADDDTKRTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
DVKSESHGVRYGSSMKIS+KIWADDD+K TKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ
Sbjct: 241 DVKSESHGVRYGSSMKISDKIWADDDSKPTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
Query: 301 SYRGLSKSGKQFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
SYRGLSKSGK+FHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLS RLNG
Sbjct: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLSNRLNG 360
Query: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL
Sbjct: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
Query: 421 RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
RFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQAGYMRELFDVI
Sbjct: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
Query: 481 DSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
DSMRSPPKKKFKTGA EKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP
Sbjct: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
Query: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ
Sbjct: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
Query: 601 TMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
TMEKRGIVGSAALYYDFARCLCSAGRC+EALMQMEKICKVANKPLVVTYTGLIQACLDSK
Sbjct: 601 TMEKRGIVGSAALYYDFARCLCSAGRCEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
Query: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR
Sbjct: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
Query: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL
Sbjct: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
Query: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL
Sbjct: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
Query: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN
Sbjct: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
Query: 901 EFQSAAVMHV 910
E QSA VMHV
Sbjct: 901 ESQSATVMHV 910
BLAST of Cp4.1LG20g05810 vs. ExPASy TrEMBL
Match:
A0A6J1KEH7 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111495096 PE=4 SV=1)
HSP 1 Score: 1764 bits (4570), Expect = 0.0
Identity = 883/910 (97.03%), Postives = 893/910 (98.13%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALHCTQNSHYLLGFSFFTSSVSGSGLNSGSAKSRVLRH 60
MVGVIMANANLCIPCCEGNGF AL+CTQNSHYLLG SFF SSVSGSGLN GSAKSRVLRH
Sbjct: 1 MVGVIMANANLCIPCCEGNGFSALYCTQNSHYLLGLSFFPSSVSGSGLNFGSAKSRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RGHKCGAIKASSKGESDI+LASGNLLE DFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK
Sbjct: 61 RGHKCGAIKASSKGESDIQLASGNLLEKDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
Query: 121 MKENASAKSAESTSISNIVTDVQGNMDVKKKVICVDQEDLFDNSERITRKIDLSGNKFDS 180
MKENASAKSAESTSISNIVTDVQGNMDVK KV+ VD EDLFDNSERITRK DLSGNKFDS
Sbjct: 121 MKENASAKSAESTSISNIVTDVQGNMDVKNKVVYVDGEDLFDNSERITRKTDLSGNKFDS 180
Query: 181 KRKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHDKRLHFKANTL 240
KRKGVTRSKDELKGKVTPFDSQ+NDKQH EKRNGNWSNYIEPKVTRSNHDKRLHFKANTL
Sbjct: 181 KRKGVTRSKDELKGKVTPFDSQINDKQHEEKRNGNWSNYIEPKVTRSNHDKRLHFKANTL 240
Query: 241 DVKSESHGVRYGSSMKISEKIWADDDTKRTKDVLKVGKYGVQLEGNYIPGDKVGRKKTEQ 300
DVKSESHGVRYGSSMKISEKIWADDD K TKDVLKVGKYGVQL+GNYIPGDKVGRKKTEQ
Sbjct: 241 DVKSESHGVRYGSSMKISEKIWADDDIKPTKDVLKVGKYGVQLKGNYIPGDKVGRKKTEQ 300
Query: 301 SYRGLSKSGKQFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQMLSKRLNG 360
SYRGLSKSGK+FHEFTEESSLEVEHAAFNSCDA DIMDKPRVSKMEMEERIQMLSKRLNG
Sbjct: 301 SYRGLSKSGKRFHEFTEESSLEVEHAAFNSCDAADIMDKPRVSKMEMEERIQMLSKRLNG 360
Query: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL
Sbjct: 361 ADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKSHKL 420
Query: 421 RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
RFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQAGYMRELFDVI
Sbjct: 421 RFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGYMRELFDVI 480
Query: 481 DSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
DSMRSPPKKKFKTGA EKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP
Sbjct: 481 DSMRSPPKKKFKTGAFEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQP 540
Query: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ
Sbjct: 541 STTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQ 600
Query: 601 TMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
TMEKRGIVGSAALYYDFARCLCSAGR +EALMQMEKICKVANKPLVVTYTGLIQACLDSK
Sbjct: 601 TMEKRGIVGSAALYYDFARCLCSAGRWEEALMQMEKICKVANKPLVVTYTGLIQACLDSK 660
Query: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRNISAVSDYR 720
NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMF+EAKELFQNMSENGRNISAVSDYR
Sbjct: 661 NLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFNEAKELFQNMSENGRNISAVSDYR 720
Query: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL
Sbjct: 721 DRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEAARGGKDEL 780
Query: 781 LETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
LETTWKHLAQADR LPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL
Sbjct: 781 LETTWKHLAQADRILPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFSKSAWLNLL 840
Query: 841 KEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
KEKRFPKDSVI+LIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN
Sbjct: 841 KEKRFPKDSVIQLIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPRLEEVVCTN 900
Query: 901 EFQSAAVMHV 910
E QSAAVMHV
Sbjct: 901 ESQSAAVMHV 910
BLAST of Cp4.1LG20g05810 vs. ExPASy TrEMBL
Match:
A0A0A0LVN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G553530 PE=4 SV=1)
HSP 1 Score: 1480 bits (3831), Expect = 0.0
Identity = 756/907 (83.35%), Postives = 810/907 (89.31%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALHCTQNSHYLLGFSFFTSSVSGSGLNSGSAKSRVLRH 60
MVGVIMAN NLCIP CE GFP LHCT NSH SFF SSVSG+ + AK+RVLRH
Sbjct: 1 MVGVIMANLNLCIPNCERYGFPTLHCTHNSHNSFWVSFFPSSVSGTDSSLSDAKNRVLRH 60
Query: 61 RGHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
R HKCG+IKA S GESDI L SGNLLE+DFQFKPSFDEYV+VME+VR+RRYKRQ DDPNK
Sbjct: 61 RVHKCGSIKALSNGESDISLPSGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDDPNK 120
Query: 121 --MKENASAKSAESTSISNI------VTDVQGNMDVKKKVICVDQEDLFDNSERITRKID 180
MKEN SAKSAESTSIS I VTDVQ N+DVK VD++DLF+N+ERI + D
Sbjct: 121 LTMKENGSAKSAESTSISKIDNGKNKVTDVQHNVDVKNMFKRVDKKDLFNNTERIAPEKD 180
Query: 181 LSGNKFDSKRKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHDKR 240
LSGNKFD +RK VTRS D++KGK+TPF S VNDKQH EKRN NWS+YIEP+VTRSN K
Sbjct: 181 LSGNKFD-RRKVVTRSNDKVKGKMTPFGSLVNDKQHEEKRNENWSSYIEPRVTRSNSKKP 240
Query: 241 LHFKANTLDVKSESHGVRYGSSMKISEKIWA--DDDTKRTKDVLKVGKYGVQLEGNYIPG 300
+HFKANTL+VK ES V G+SMK SEKIWA DDD K K VLK GKYG+QLE +Y PG
Sbjct: 241 IHFKANTLEVKKESSRVSDGNSMKTSEKIWAWGDDDAKPAKGVLKAGKYGIQLERSYNPG 300
Query: 301 DKVGRKKTEQSYRGLSKSGKQFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEER 360
DKVGRKKTEQSYRG S SGK+F EF E++SLEVEHAAFN+ DA DIMDKPRVSKMEMEER
Sbjct: 301 DKVGRKKTEQSYRGTSTSGKRFLEFNEKNSLEVEHAAFNNFDAFDIMDKPRVSKMEMEER 360
Query: 361 IQMLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQ 420
IQMLSKRLNGADIDMPEWMF+QMMRSAKIRYSDHSILRVIQVLGKLGNW+RVLQ+IEWLQ
Sbjct: 361 IQMLSKRLNGADIDMPEWMFSQMMRSAKIRYSDHSILRVIQVLGKLGNWRRVLQIIEWLQ 420
Query: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQA 480
MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQA
Sbjct: 421 MRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQA 480
Query: 481 GYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVL 540
GYMRELFDVIDSMRSPPKKKFKTG LEKWDPRLQPDIVIYNAVLNACVKRKN EGAFWVL
Sbjct: 481 GYMRELFDVIDSMRSPPKKKFKTGVLEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFWVL 540
Query: 541 QELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG 600
QELK+Q LQPST+TYGLVMEVML+CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG
Sbjct: 541 QELKKQSLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEG 600
Query: 601 KTDEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYT 660
KTDEAVLAI+ ME RGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYT
Sbjct: 601 KTDEAVLAIENMEIRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYT 660
Query: 661 GLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENG 720
GLIQACLDSK+LQSAVYIFNHMKAFCSPNLVT NILLKGYL+HGMF+EA+ELFQN+SE
Sbjct: 661 GLIQACLDSKDLQSAVYIFNHMKAFCSPNLVTYNILLKGYLEHGMFEEARELFQNLSEQR 720
Query: 721 RNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIM 780
RNIS VSDYRDRVLPDIY FNTMLDASFAEKRWDDFS+FYNQM LYGYHFNPKRHLRMI+
Sbjct: 721 RNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRMIL 780
Query: 781 EAARGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHH 840
EAARGGKDELLETTWKHLAQADRT PPPL+KERFC+ LARGDYSEALS I H+S D HH
Sbjct: 781 EAARGGKDELLETTWKHLAQADRTPPPPLLKERFCMKLARGDYSEALSSIWSHNSGDAHH 840
Query: 841 FSKSAWLNLLKEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVAD 897
FS+SAWLNLLKEKRFP+D+VIELIHKV M+L RN+SPNPV +NLLLS KEFCR+RIS+AD
Sbjct: 841 FSESAWLNLLKEKRFPRDTVIELIHKVGMVLTRNESPNPVFKNLLLSCKEFCRTRISLAD 900
BLAST of Cp4.1LG20g05810 vs. ExPASy TrEMBL
Match:
A0A6J1CLQ9 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012614 PE=4 SV=1)
HSP 1 Score: 1479 bits (3829), Expect = 0.0
Identity = 749/918 (81.59%), Postives = 814/918 (88.67%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALHCTQNSHYLLGFSFFTSSVSGSGLNSGSAKSRVLRH 60
MVGVIMANAN+CIPCCE NGF ALHCTQ+SH L GFS F S +SG GLN G K+R+ R+
Sbjct: 1 MVGVIMANANMCIPCCERNGFRALHCTQSSHNLFGFSLFPSPISGIGLNVGYEKNRIFRY 60
Query: 61 RGHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNK 120
RG+KCGAI+ SSKGESDIRL +GN+LENDF FKPSFDEYVRVMESVR+ RYK+Q DDPNK
Sbjct: 61 RGNKCGAIRVSSKGESDIRLQNGNVLENDFLFKPSFDEYVRVMESVRTSRYKKQPDDPNK 120
Query: 121 --MKENASAKSAESTSISNI------VTDVQGNMDVKKKVICVDQEDLFDNSERITRKID 180
MKENASAKSAES+S+S I VTDVQGN+DVK VDQ+ LF+N+ER+TRK D
Sbjct: 121 LKMKENASAKSAESSSVSEIDNEKTKVTDVQGNVDVKNMFKRVDQKKLFNNAERVTRKKD 180
Query: 181 LSGNKFDSKRKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHDKR 240
L NKFD+KRKG+TR+KDE +GKVT FDSQVNDKQH E+R N + IEPKV R N++
Sbjct: 181 LLENKFDNKRKGITRTKDEFRGKVTHFDSQVNDKQHEEQRKRNRLDCIEPKVRRLNNEAL 240
Query: 241 LHFKANTLDVKSESHGVRYGSSMKISEKIWADDDTKRTKDVLKVGKYGVQLEGNYIPGDK 300
+ KANTLD+K + V SSMK E+IWAD DTK K L+VGK GVQL NY+PG+K
Sbjct: 241 VCSKANTLDIKRQRQRVCDESSMKTVERIWADGDTKLAKGDLEVGKSGVQLARNYVPGEK 300
Query: 301 VGRKKTEQSYRGLSKSGKQFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEMEERIQ 360
V KKT QSY+GLSKSGK F E TEESSLEVE AA N+ DA DIMDKPRVSKMEMEERIQ
Sbjct: 301 VSGKKTGQSYQGLSKSGKPFIESTEESSLEVERAALNNFDALDIMDKPRVSKMEMEERIQ 360
Query: 361 MLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMR 420
MLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMR
Sbjct: 361 MLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMR 420
Query: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGY 480
ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQ+HFSSYPDLVAYHSIAVTLGQAGY
Sbjct: 421 ERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQQHFSSYPDLVAYHSIAVTLGQAGY 480
Query: 481 MRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQE 540
MRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQE
Sbjct: 481 MRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQE 540
Query: 541 LKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKT 600
LK+QGLQPST+TYGLVMEVML+CGKYNLVHEFFRKVQ+SSIPNALTYKVLVNTL KEGKT
Sbjct: 541 LKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQRSSIPNALTYKVLVNTLSKEGKT 600
Query: 601 DEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGL 660
DEAVLAIQ ME+RGIVGSAALYYDFARCLCSAGRCKEALMQ+EKICKVANKPLVVTYTGL
Sbjct: 601 DEAVLAIQNMERRGIVGSAALYYDFARCLCSAGRCKEALMQIEKICKVANKPLVVTYTGL 660
Query: 661 IQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGRN 720
IQACLDSKNL SAVYIFNHMKAFCSPNLVT NILLKGYLDHGMF+EA+ELFQN+SE+G++
Sbjct: 661 IQACLDSKNLDSAVYIFNHMKAFCSPNLVTYNILLKGYLDHGMFEEARELFQNLSESGQS 720
Query: 721 ISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIMEA 780
IS +SDY+DRVLPDIYTFN MLDA FA KRWDDF +FYNQM LYGYHFNPKRHLRMI+EA
Sbjct: 721 ISTISDYKDRVLPDIYTFNIMLDAFFAVKRWDDFGYFYNQMFLYGYHFNPKRHLRMILEA 780
Query: 781 ARGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDEHHFS 840
R GKDE+LETTWKHLAQ DRTLPPPL+KERFC+ LARGDYSEALSCIS HHSSD HHFS
Sbjct: 781 GRAGKDEILETTWKHLAQTDRTLPPPLVKERFCMKLARGDYSEALSCISNHHSSDAHHFS 840
Query: 841 KSAWLNLLKEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISVADPR 900
+SAWLNLLKEK FPKD+VI LIHKVSMLL N PNPV QNLL S KEFCR+RI+VAD +
Sbjct: 841 ESAWLNLLKEKGFPKDTVILLIHKVSMLLTGNHPPNPVFQNLLSSCKEFCRTRITVADSK 900
Query: 901 LEEVVCTNEFQSAAVMHV 910
LE++VC +E QSAAVMH+
Sbjct: 901 LEQIVCRDETQSAAVMHI 918
BLAST of Cp4.1LG20g05810 vs. ExPASy TrEMBL
Match:
A0A1S3C8Z0 (pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498323 PE=4 SV=1)
HSP 1 Score: 1476 bits (3822), Expect = 0.0
Identity = 754/913 (82.58%), Postives = 811/913 (88.83%), Query Frame = 0
Query: 1 MVGVIMANANLCIPCCEGNGFPALHCTQNSHYLLGFSFFTSSVSGSG--LNSGSAKSRVL 60
MVGVIMAN NL IP CE GFP LHCT NSH SFF SSVSG G LN AK+RVL
Sbjct: 1 MVGVIMANVNLSIPNCERYGFPTLHCTHNSHTSFWVSFFPSSVSGGGTDLNFSDAKNRVL 60
Query: 61 RHRGHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDP 120
RHR HKCG+IKA S GESDI L +GNLLE+DFQFKPSFDEYV+VME+VR+RRYKRQ D P
Sbjct: 61 RHRIHKCGSIKALSNGESDISLPNGNLLEHDFQFKPSFDEYVKVMETVRTRRYKRQLDYP 120
Query: 121 NK--MKENASAKSAESTSISNI------VTDVQGNMDVKKKVICVDQEDLFDNSERITRK 180
NK MKEN SAKSAESTSIS I VTDVQ N++VK VD++DLF+N+ERI R+
Sbjct: 121 NKLTMKENCSAKSAESTSISKIDNGKNKVTDVQHNVEVKNMFKRVDKKDLFNNTERIARE 180
Query: 181 IDLSGNKFDSKRKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHD 240
LSGNKFD + KGVTRS D++KGK+TPF S VNDKQH EK+NGNWS+YIEPKVTRSN +
Sbjct: 181 KHLSGNKFD-RSKGVTRSNDKVKGKMTPFGSLVNDKQHEEKKNGNWSSYIEPKVTRSNCE 240
Query: 241 KRLHFKANTLDVKSESHGVRYGSSMKISEKIWA--DDDTKRTKDVLKVGKYGVQLEGNYI 300
K +HFKAN L+ K E V YG+SMK SEKIWA +DD K KDVLK GKYG+QLE +Y
Sbjct: 241 KPIHFKANALEFKKEGSRVSYGNSMKTSEKIWAWGEDDAKPAKDVLKAGKYGIQLERSYS 300
Query: 301 PGDKVGRKKTEQSYRGLSKSGKQFHEFTEESSLEVEHAAFNSCDAEDIMDKPRVSKMEME 360
PGDKVGRKKTEQSYRG S SGK+F EFTEE+SLEVEHAAFN+ DA DIMDKPRVSKMEME
Sbjct: 301 PGDKVGRKKTEQSYRGTSTSGKRFLEFTEENSLEVEHAAFNNFDALDIMDKPRVSKMEME 360
Query: 361 ERIQMLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEW 420
ERIQMLSKRLNGADIDMPEWMF+QMMR AKIRYSDHSILRVIQVLGKLGNW+RVLQVIEW
Sbjct: 361 ERIQMLSKRLNGADIDMPEWMFSQMMRGAKIRYSDHSILRVIQVLGKLGNWRRVLQVIEW 420
Query: 421 LQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLG 480
LQMRERFKSHK RFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLG
Sbjct: 421 LQMRERFKSHKPRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLG 480
Query: 481 QAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFW 540
QAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKN EGAFW
Sbjct: 481 QAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNLEGAFW 540
Query: 541 VLQELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWK 600
VLQELK+QGLQPST+TYGLVMEVML+CGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWK
Sbjct: 541 VLQELKKQGLQPSTSTYGLVMEVMLECGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWK 600
Query: 601 EGKTDEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVT 660
EGKTDEAVLAI+ ME RG+VGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVT
Sbjct: 601 EGKTDEAVLAIENMEMRGVVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVT 660
Query: 661 YTGLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSE 720
YTGLIQACLDSK+LQSAVY+FN MKAFCSPNLVT NILLKGYL+HGMF+EA+EL QN+SE
Sbjct: 661 YTGLIQACLDSKDLQSAVYVFNQMKAFCSPNLVTYNILLKGYLEHGMFEEARELLQNLSE 720
Query: 721 NGRNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRM 780
+NIS VSDYRDRVLPDIY FNTMLDASFAEKRWDDFS+FYNQM LYGYHFNPKRHLRM
Sbjct: 721 QRQNISTVSDYRDRVLPDIYMFNTMLDASFAEKRWDDFSYFYNQMFLYGYHFNPKRHLRM 780
Query: 781 IMEAARGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEALSCISKHHSSDE 840
I+EAAR GKDELLETTWKHLAQADRT PPPL+KERFC+ +ARGDY+EAL CIS H+S D
Sbjct: 781 ILEAARVGKDELLETTWKHLAQADRTPPPPLLKERFCMKVARGDYTEALRCISNHNSGDA 840
Query: 841 HHFSKSAWLNLLKEKRFPKDSVIELIHKVSMLLARNDSPNPVLQNLLLSGKEFCRSRISV 900
HHFS+SAWLNLLKEKRFPKD+VIELIHKV M+ A N+SPNPV +NLLLS KEFCR+RISV
Sbjct: 841 HHFSESAWLNLLKEKRFPKDTVIELIHKVGMVFATNESPNPVFKNLLLSCKEFCRTRISV 900
BLAST of Cp4.1LG20g05810 vs. TAIR 10
Match:
AT1G30610.2 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 750.4 bits (1936), Expect = 1.7e-216
Identity = 383/674 (56.82%), Postives = 499/674 (74.04%), Query Frame = 0
Query: 221 EPKVTRSNHDKRLHFKANTLDVKSESHGVRYGSSMKISEKIWADDDTKRTKDVLKVGKYG 280
E +V R D R +L SE R G+ + + DT R + G G
Sbjct: 304 ERRVQRIAKDVRWSKSDESLVPVSEDESFRRGNPKQEMVRYQRVSDTSRGIERGSKGD-G 363
Query: 281 VQLEGNYIPGDKVGRKKTE---QSYRGLSKSGKQFHEFTEESSLEVEHAAFN-SCDAEDI 340
+ L +++ ++ E G + G + ++ ++S +E AF S ++ DI
Sbjct: 364 LDLLAEERRIERLANERHEIRSSKLSGTRRIGAKRNDDDDDSLFAMETPAFRFSDESSDI 423
Query: 341 MDKPRVSKMEMEERIQMLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKL 400
+DKP S++EME+RI+ L+K LNGADI+MPEW F++ +RSAKIRY+D++++R+I LGKL
Sbjct: 424 VDKPATSRVEMEDRIEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKL 483
Query: 401 GNWKRVLQVIEWLQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPD 460
GNW+RVLQVIEWLQ ++R+KS+K+R IYTTAL+VLGK+RRPVEALNVFHAM SSYPD
Sbjct: 484 GNWRRVLQVIEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPD 543
Query: 461 LVAYHSIAVTLGQAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNA 520
+VAY SIAVTLGQAG+++ELF VID+MRSPPKKKFK LEKWDPRL+PD+V+YNAVLNA
Sbjct: 544 MVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNA 603
Query: 521 CVKRKNWEGAFWVLQELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNA 580
CV+RK WEGAFWVLQ+LK++G +PS TYGL+MEVML C KYNLVHEFFRK+QKSSIPNA
Sbjct: 604 CVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNA 663
Query: 581 LTYKVLVNTLWKEGKTDEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEK 640
L Y+VLVNTLWKEGK+DEAV ++ ME RGIVGSAALYYD ARCLCSAGRC E L ++K
Sbjct: 664 LAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKK 723
Query: 641 ICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMF 700
IC+VANKPLVVTYTGLIQAC+DS N+++A YIF+ MK CSPNLVTCNI+LK YL G+F
Sbjct: 724 ICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLF 783
Query: 701 DEAKELFQNMSENGRNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLY 760
+EA+ELFQ MSE+G +I SD+ RVLPD YTFNTMLD +++WDDF + Y +ML +
Sbjct: 784 EEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRH 843
Query: 761 GYHFNPKRHLRMIMEAARGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLARGDYSEA 820
GYHFN KRHLRM++EA+R GK+E++E TW+H+ +++R P PLIKERF L +GD+ A
Sbjct: 844 GYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLEKGDHISA 903
Query: 821 LSCIS----KHHSSDEHHFSKSAWLNLLKEKRFPKDSVIELIHKVSMLL-ARNDSPNPVL 880
+S ++ K ++ FS SAW +L RF +DSV+ L+ V+ L +R++S + VL
Sbjct: 904 ISSLADLNGKIEETELRAFSTSAWSRVL--SRFEQDSVLRLMDDVNRRLGSRSESSDSVL 963
Query: 881 QNLLLSGKEFCRSR 886
NLL S K++ ++R
Sbjct: 964 GNLLSSCKDYLKTR 974
HSP 2 Score: 38.1 bits (87), Expect = 4.4e-02
Identity = 15/30 (50.00%), Postives = 25/30 (83.33%), Query Frame = 0
Query: 87 ENDFQFKPSFDEYVRVMESVRSRRYKRQSD 117
+ F+FKPSFD+Y+++MESV++ R K++ D
Sbjct: 68 DKGFEFKPSFDQYLQIMESVKTARKKKKFD 97
BLAST of Cp4.1LG20g05810 vs. TAIR 10
Match:
AT1G30610.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 728.4 bits (1879), Expect = 7.1e-210
Identity = 414/861 (48.08%), Postives = 561/861 (65.16%), Query Frame = 0
Query: 62 GHKCGAIKASSKGESDIRLASGNLLENDFQFKPSFDEYVRVMESVRSRRYKRQSDDPNKM 121
G A+K S GES + + + F+ + S EY R ++ R + D+ + +
Sbjct: 172 GESSVALKLSKSGESSVTVPE----DESFRKRYSKQEYHRSSDTSRGIERGSRGDELDLV 231
Query: 122 KENASAKSAESTSISNIVTDVQGNMDVKKKVICVDQEDLFDNSERITRKIDLSGNKFDSK 181
E + I D + + ++ + V + ++S +T D S + SK
Sbjct: 232 --------VEERRVQRIAKDARWSKS-RESSVAVKWSNSGESS--VTMPKDESFRRRYSK 291
Query: 182 RKGVTRSKDELKGKVTPFDSQVNDKQHVEKRNGNWSNYIEPKVTRSNHDKRLHFKANTLD 241
++ RS D +G S+ ++ + V + E +V R D R +L
Sbjct: 292 QEH-HRSSDTSRGIAR--GSKGDELELVVE---------ERRVQRIAKDVRWSKSDESLV 351
Query: 242 VKSESHGVRYGSSMKISEKIWADDDTKRTKDVLKVGKYGVQLEGNYIPGDKVGRKKTE-- 301
SE R G+ + + DT R + G G+ L +++ ++ E
Sbjct: 352 PVSEDESFRRGNPKQEMVRYQRVSDTSRGIERGSKGD-GLDLLAEERRIERLANERHEIR 411
Query: 302 -QSYRGLSKSGKQFHEFTEESSLEVEHAAFN-SCDAEDIMDKPRVSKMEMEERIQMLSKR 361
G + G + ++ ++S +E AF S ++ DI+DKP S++EME+RI+ L+K
Sbjct: 412 SSKLSGTRRIGAKRNDDDDDSLFAMETPAFRFSDESSDIVDKPATSRVEMEDRIEKLAKV 471
Query: 362 LNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRERFKS 421
LNGADI+MPEW F++ +RSAKIRY+D++++R+I LGKLGNW+RVLQVIEWLQ ++R+KS
Sbjct: 472 LNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQRQDRYKS 531
Query: 422 HKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYMRELF 481
+K+R IYTTAL+VLGK+RRPVEALNVFHAM SSYPD+VAY SIAVTLGQAG+++ELF
Sbjct: 532 NKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQAGHIKELF 591
Query: 482 DVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQG 541
VID+MRSPPKKKFK LEKWDPRL+PD+V+YNAVLNACV+RK WEGAFWVLQ+LK++G
Sbjct: 592 YVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRG 651
Query: 542 LQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIPNALTYKVLVNTLWKEGKTDEAVL 601
+PS TYGL+MEVML C KYNLVHEFFRK+QKSSIPNAL Y+VLVNTLWKEGK+DEAV
Sbjct: 652 QKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVH 711
Query: 602 AIQTMEKRGIVGSAALYYDFARCLCSAGRCKEAL-------------------------- 661
++ ME RGIVGSAALYYD ARCLCSAGRC E L
Sbjct: 712 TVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHT 771
Query: 662 --MQMEKICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKG 721
Q++KIC+VANKPLVVTYTGLIQAC+DS N+++A YIF+ MK CSPNLVTCNI+LK
Sbjct: 772 IQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKA 831
Query: 722 YLDHGMFDEAKELFQNMSENGRNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHF 781
YL G+F+EA+ELFQ MSE+G +I SD+ RVLPD YTFNTMLD +++WDDF +
Sbjct: 832 YLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYA 891
Query: 782 YNQMLLYGYHFNPKRHLRMIMEAARGGKDELLETTWKHLAQADRTLPPPLIKERFCIMLA 841
Y +ML +GYHFN KRHLRM++EA+R GK+E++E TW+H+ +++R P PLIKERF L
Sbjct: 892 YREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIPPSPLIKERFFRKLE 951
Query: 842 RGDYSEALSCIS----KHHSSDEHHFSKSAWLNLLKEKRFPKDSVIELIHKVSMLL-ARN 886
+GD+ A+S ++ K ++ FS SAW +L RF +DSV+ L+ V+ L +R+
Sbjct: 952 KGDHISAISSLADLNGKIEETELRAFSTSAWSRVL--SRFEQDSVLRLMDDVNRRLGSRS 1002
HSP 2 Score: 38.1 bits (87), Expect = 4.4e-02
Identity = 15/30 (50.00%), Postives = 25/30 (83.33%), Query Frame = 0
Query: 87 ENDFQFKPSFDEYVRVMESVRSRRYKRQSD 117
+ F+FKPSFD+Y+++MESV++ R K++ D
Sbjct: 68 DKGFEFKPSFDQYLQIMESVKTARKKKKFD 97
BLAST of Cp4.1LG20g05810 vs. TAIR 10
Match:
AT5G67570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 410.2 bits (1053), Expect = 4.3e-114
Identity = 221/557 (39.68%), Postives = 339/557 (60.86%), Query Frame = 0
Query: 349 ERIQMLSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEW 408
E +++L RL+G +I+ W F +MM + +++++ +L+++ LG+ +WK+ V+ W
Sbjct: 183 EAVRVLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHW 242
Query: 409 LQMRERFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLG 468
+ ++ K + RF+YT L VLG ARRP EAL +F+ M YPD+ AYH IAVTLG
Sbjct: 243 VYSDKKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLG 302
Query: 469 QAGYMRELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFW 528
QAG ++EL VI+ MR P K K + WDP L+PD+V+YNA+LNACV W+ W
Sbjct: 303 QAGLLKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSW 362
Query: 529 VLQELKEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKS-SIPNALTYKVLVNTLW 588
V EL++ GL+P+ TYGL MEVML+ GK++ VH+FFRK++ S P A+TYKVLV LW
Sbjct: 363 VFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALW 422
Query: 589 KEGKTDEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVAN-KPLV 648
+EGK +EAV A++ ME++G++G+ ++YY+ A CLC+ GR +A++++ ++ ++ N +PL
Sbjct: 423 REGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLE 482
Query: 649 VTYTGLIQACLDSKNLQSAVYIFNHMKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNM 708
+T+TGLI A L+ ++ + IF +MK C PN+ T N++LK Y + MF EAKELF+ +
Sbjct: 483 ITFTGLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEI 542
Query: 709 SENGRNISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHL 768
VS ++P+ YT++ ML+AS +W+ F H Y M+L GY + +H
Sbjct: 543 ---------VSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHA 602
Query: 769 RMIMEAARGGKDELLETTWKHLAQADRTLPPPL-IKERFCIMLARGDYSEALSCISKHHS 828
M++EA+R GK LLE + + + D +P PL E C A+GD+ A++ I+ +
Sbjct: 603 SMLIEASRAGKWSLLEHAFDAVLE-DGEIPHPLFFTELLCHATAKGDFQRAITLINT-VA 662
Query: 829 SDEHHFSKSAWLNLLKEKR--FPKDSVIELIHKVSMLLARND-SPNPVLQNLLLSGKEFC 888
S+ W +L +E + +D+ +HK+S L D P + NL S K C
Sbjct: 663 LASFQISEEEWTDLFEEHQDWLTQDN----LHKLSDHLIECDYVSEPTVSNLSKSLKSRC 722
Query: 889 RSRISVADPRLEEVVCT 900
S S A P L V T
Sbjct: 723 GSSSSSAQPLLAVDVTT 724
BLAST of Cp4.1LG20g05810 vs. TAIR 10
Match:
AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 110.9 bits (276), Expect = 5.4e-24
Identity = 103/477 (21.59%), Postives = 198/477 (41.51%), Query Frame = 0
Query: 354 LSKRLNGADIDMPEWMFAQMMRSAKIRYSDHSILRVIQVLGKLGNWKRVLQVIEWLQMRE 413
LS L G D +F M++S + + R+ + K ++ VL + + QM
Sbjct: 60 LSSGLVGIKADDAVDLFRDMIQSRPLP-TVIDFNRLFSAIAKTKQYELVLALCK--QMES 119
Query: 414 RFKSHKLRFIYTTALDVLGKARRPVEALNVFHAMQEHFSSYPDLVAYHSIAVTLGQAGYM 473
+ +H + + + ++ + R+ A + + + PD V ++++ L +
Sbjct: 120 KGIAHSI-YTLSIMINCFCRCRKLSYAFSTMGKIMK-LGYEPDTVIFNTLLNGLCLECRV 179
Query: 474 RELFDVIDSMRSPPKKKFKTGALEKWDPRLQPDIVIYNAVLNACVKRKNWEGAFWVLQEL 533
E +++D M K P ++ N ++N A ++ +
Sbjct: 180 SEALELVDRMVEMGHK---------------PTLITLNTLVNGLCLNGKVSDAVVLIDRM 239
Query: 534 KEQGLQPSTTTYGLVMEVMLQCGKYNLVHEFFRKVQKSSIP-NALTYKVLVNTLWKEGKT 593
E G QP+ TYG V+ VM + G+ L E RK+++ +I +A+ Y ++++ L K+G
Sbjct: 240 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 299
Query: 594 DEAVLAIQTMEKRGIVGSAALYYDFARCLCSAGRCKEALMQMEKICKVANKPLVVTYTGL 653
D A ME +G Y C+AGR + + + K P VVT++ L
Sbjct: 300 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 359
Query: 654 IQACLDSKNLQSAVYIFNH-MKAFCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSENGR 713
I + + L+ A + M+ +PN +T N L+ G+ +EA ++ M G
Sbjct: 360 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC 419
Query: 714 NISAVSDYRDRVLPDIYTFNTMLDASFAEKRWDDFSHFYNQMLLYGYHFNPKRHLRMIME 773
+ PDI TFN +++ R DD + +M L G N + ++
Sbjct: 420 D------------PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 479
Query: 774 AARGGKDELLETTWKHLAQADRTLPPPLIKERFCI--MLARGDYSEALSCISKHHSS 827
+ GK E+ + ++ + R + P ++ + + + G+ +AL K S
Sbjct: 480 FCQSGKLEVAKKLFQEM--VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
BLAST of Cp4.1LG20g05810 vs. TAIR 10
Match:
AT2G17140.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 107.8 bits (268), Expect = 4.5e-23
Identity = 58/215 (26.98%), Postives = 107/215 (49.77%), Query Frame = 0
Query: 501 PRLQPDIVIYNAVLNACVKRKNWEGAFWVLQELKEQGLQPSTTTYGLVMEVMLQCGKYNL 560
P +P + +YN +L +C+K + E W+ +++ G+ P T T+ L++ + +
Sbjct: 106 PENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDA 165
Query: 561 VHEFFRKV-QKSSIPNALTYKVLVNTLWKEGKTDEAVLAIQTMEKRGIVGSAALYYDFAR 620
E F ++ +K PN T+ +LV K G TD+ + + ME G++ + +Y
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVS 225
Query: 621 CLCSAGRCKEALMQMEKICKVANKPLVVTYTGLIQACLDSKNLQSAVYIFNHMK-----A 680
C GR ++ +EK+ + P +VT+ I A + A IF+ M+
Sbjct: 226 SFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLG 285
Query: 681 FCSPNLVTCNILLKGYLDHGMFDEAKELFQNMSEN 710
PN +T N++LKG+ G+ ++AK LF+++ EN
Sbjct: 286 LPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREN 320
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SA76 | 1.0e-208 | 48.08 | Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidop... | [more] |
Q9FJW6 | 6.0e-113 | 39.68 | Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidop... | [more] |
Q9LPX2 | 7.5e-23 | 21.59 | Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... | [more] |
Q0WPZ6 | 6.4e-22 | 26.98 | Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX... | [more] |
Q76C99 | 1.1e-21 | 24.61 | Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV... | [more] |
Match Name | E-value | Identity | Description | |
XP_023519692.1 | 0.0 | 100.00 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucurbita ... | [more] |
KAG7019446.1 | 0.0 | 97.58 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_022927392.1 | 0.0 | 97.25 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chlo... | [more] |
XP_023000737.1 | 0.0 | 97.03 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Cucurbita ... | [more] |
KAG6583820.1 | 0.0 | 94.87 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EH18 | 0.0 | 97.25 | LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g30610, chlo... | [more] |
A0A6J1KEH7 | 0.0 | 97.03 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucurbit... | [more] |
A0A0A0LVN7 | 0.0 | 83.35 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G553530 PE=4 SV=1 | [more] |
A0A6J1CLQ9 | 0.0 | 81.59 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Momordic... | [more] |
A0A1S3C8Z0 | 0.0 | 82.58 | pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Cucumis ... | [more] |
Match Name | E-value | Identity | Description | |
AT1G30610.2 | 1.7e-216 | 56.82 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT1G30610.1 | 7.1e-210 | 48.08 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT5G67570.1 | 4.3e-114 | 39.68 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G12775.1 | 5.4e-24 | 21.59 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G17140.1 | 4.5e-23 | 26.98 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |