Cp4.1LG20g05770 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG20g05770
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Tubulin beta chain
Location	Cp4.1LG20: 3425948 .. 3428968 (-)
RNA-Seq Expression	Cp4.1LG20g05770
Synteny	Cp4.1LG20g05770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGGTTGAGACTTGAGAGAGAATATTGGGTTTGATTTAGCTTTTCCTTTTTTGGAATTAAAAAAAAAAGAATAAATAAATAAAAGTTTATTTGCAAGAAAGCCCTTCAAATTTAACTTATTTGCACAAGAAGTAAGTAAGTAAGTATAAATACTCCCGACATCCCTGTTTATTCCTTCATCCTCTAGATTCCATTGGTTAAGTAACAAATCCCGTCCCCACTTTCTCTCTCTCAATTTTCGATTCCCCCAATTTTCCCGCCGTTGATCTCAAGTTTTCCGTTTGTTTCCCGGGAAAAAATATGAGAGAAATCCTCCACATTCAGGGCGGCCAATGTGGCAATCAGATCGGTGCGAAGTTCTGGGAGGTCATTTGCGACGAACATGGCATTGACCACACCGGCAAATACAGCGGCGATTCTGAGCTTCAACTCGAGCGGATTAATGTCTATTACAATGAGGCTAGTGGTGGTAGGTATGTTCCTCGTGCCGTTCTTATGGATCTCGAGCCTGGAACCATGGATTCCGTCAGATCCGGAACCTTTGGCCAGATCTTCCGTCCCGATAACTTCGTTTTTGGTCAGTCTGGGGCTGGGAATAATTGGGCGAAGGGACATTACACCGAAGGAGCTGAGCTAATCGATTCTGTTCTCGATGTTGTTAGGAAGGAGGCTGAGAATTGTGATTGCTTGCAAGGTAATCTCATTTTTTCGAAAAGGAACTGTTGGTCTTGATCTTCGATTTCGCGCGCAATTTTCTCATTTGGTTCCTTTTGTGGTAACTTATTTTGATGTTTGAGTACTGTGAATCGTTCTGGTGTTAATTTCTTTTTGGTAATTCCACCTTTTTTCTTCGTATCATACCGATTAGATTCTTTTAGCCTCTGATGTTTCGGATTTTGTTTCAAGAATCTTATCTCCTGGCTGCTTATTTTCGTTTGTTTTTACTGAGCTTTCTTCTCAAAATTGGAGAAATAGTTCAATTTCTGTAAATCTTTTCTTTAGTTGCCTACATGCGTTCAGTCGAGCTTCTGATATCACGTATATCATATATTTCACCGTGTTTTCCATACCCGCGGAATTTAACTATAAGGAATTTACGAAACCATGGTATTAACTCTGTTTTCGATGCTATTCTCTCTGGATCTGATCATACTGAAAAGATTATCAGGTCCGGAGAATTTCCTATATTCATCCTTTTCATAATTTGTAATTCTATAGAGTTGTTTTTATCAACTTTGATGCCGTGGATGATCTTGTATCTTTCTTTTAATGTATATACCTGCCGATTGTTTGTACCATTAACTCTGTTCTAATTAAGTAAAATCATCAATTTAAAACTTCAGCGTTTAAGGCTGGCTACTTTTTTGGTGCTTATTTGTGCAGGATTCCAAGTTTGTCATTCTTTGGGTGGAGGCACTGGCTCTGGAATGGGAACACTTCTGATTTCAAAGATCAGGGAGGAGTTCCCAGATCGCATGATGTTGGCATTTTCTGTATTTCCTTCTCCCAAGGTTTCAGACACAGTTGTAGAACCATACAATGCCACTTTGTCTGTTCACCAGCTTGTGGAGAATGCTGATGAATGCATGGTCCTTGACAATGAAGCTCTCTACGATATTTGCTTCCGAACACTCAAGCTTGCTACTCCTACATGTAAGTGTCCAAGTCCTTCAACTCATATTTGAGCCTTGAAATTGACCTTTGCATACTCATTGTTTTTATAAAAAGCTGAAAATGGATGGTGTTGAATATCTGAAGATCTGGTATGGGTATTATAATACAAACTTATCTGTACAGACTTTCTTTTAGGCTTTCTCTTGCTTCATTATTATTTAGACAATACCGGAATTGACTTGGTATTAGTAGCCTACTCGCTTTTGACTGACCAGACCTCCTTGTTTGAGGGAAGATTCCAATTCATGTAAAAAAAAAAGCAATCCCGATATTTTCCAATTTGGAATAGTAAACAGGTGTGACCTTTTTATGCGATCTTGATAGCCGGGGCTAACCCTCTTGGAGCATGTCTCAACAATAATTCTAGAAAGAGGGATATTGGTGCATTTTCACTAGTTGCCTTTCAAAAGTTCCTTCAGGTCTTAGTAAGAGCATTCATTCATCGGATTCGGATGTATTTTGTAACCCTATACAAGGAAAGCGAGAGCTGGACATCATGTCAGCGTAAAAATGATTGTTTTCAAGTTCCAAATCCCGATCATCATTCACTGGTAGCAGCTGTTTTCAAGTTCCAAATAAGTTCAATCTTTTAGTAGTTTTCTTATTGTATAATATAAGATAAACTTTAACTTATTGATCACATTGTTTCTTACTTGTTCAATTGTCATATTATAGTTGGTGATCTGAACCACCTTATCTCTTCTACCATGAGTGGTGTTACTTGTTGTCTACGATTCCCTGGACAATTGAACTCTGATCTACGAAAGCTTGCTGTCAATCTTATTCCTTTCCCTCGTCTACATTTCTTTATGGTTGGTTTTGCACCATTAACATCAAGAGGATCCCAGCAGTACCGATCCCTCACGGTGCCAGAGTTAACCCAGCAGATGTGGGATGCCAAAAACATGATGTGCGCTGCCGATCCACGACACGGTCGGTACCTTACCGCTTCAGCCATGTTCCGTGGTAAGATGAGCACTAAAGAAGTAGACGAGCAGATGATCAATGTACAAAACAAGAACTCATCTTACTTTGTCGAATGGATACCCAACAACGTGAAGTCTAGCGTGTGTGACATCCCACCCAAGGGTCTGAAGATGGCGTCGACTTTCATCGGTAACTCGACTTCAATTCAGGAGATGTTCAGGAGGGTTAGTGAGCAGTTCACAGCCATGTTCAGGCGCAAGGCCTTCTTGCATTGGTACACCGGTGAAGGAATGGACGAAATGGAGTTCACCGAGGCTGAGAGTAACATGAACGATCTGGTCGCCGAGTATCAGCAGTACCAGGATGCGACTGCCGACGAAGAGTTCGAAGCTGAAGAAGAGGAAGCCCCTGCTTGA

mRNA sequence

ATGAAGGTAACAAATCCCGTCCCCACTTTCTCTCTCTCAATTTTCGATTCCCCCAATTTTCCCGCCGTTGATCTCAAGTTTTCCGTTTGTTTCCCGGGAAAAAATATGAGAGAAATCCTCCACATTCAGGGCGGCCAATGTGGCAATCAGATCGGTGCGAAGTTCTGGGAGGTCATTTGCGACGAACATGGCATTGACCACACCGGCAAATACAGCGGCGATTCTGAGCTTCAACTCGAGCGGATTAATGTCTATTACAATGAGGCTAGTGGTGGTAGGTATGTTCCTCGTGCCGTTCTTATGGATCTCGAGCCTGGAACCATGGATTCCGTCAGATCCGGAACCTTTGGCCAGATCTTCCGTCCCGATAACTTCGTTTTTGGTCAGTCTGGGGCTGGGAATAATTGGGCGAAGGGACATTACACCGAAGGAGCTGAGCTAATCGATTCTGTTCTCGATGTTGTTAGGAAGGAGGCTGAGAATTGTGATTGCTTGCAAGGATTCCAAGTTTGTCATTCTTTGGGTGGAGGCACTGGCTCTGGAATGGGAACACTTCTGATTTCAAAGATCAGGGAGGAGTTCCCAGATCGCATGATGTTGGCATTTTCTGTATTTCCTTCTCCCAAGGTTTCAGACACAGTTGTAGAACCATACAATGCCACTTTGTCTGTTCACCAGCTTGTGGAGAATGCTGATGAATGCATGGTCCTTGACAATGAAGCTCTCTACGATATTTGCTTCCGAACACTCAAGCTTGCTACTCCTACATACAATACCGGAATTGACTTGGAGATGTTCAGGAGGGTTAGTGAGCAGTTCACAGCCATGTTCAGGCGCAAGGCCTTCTTGCATTGGTACACCGGTGAAGGAATGGACGAAATGGAGTTCACCGAGGCTGAGAGTAACATGAACGATCTGGTCGCCGAGTATCAGCAGTACCAGGATGCGACTGCCGACGAAGAGTTCGAAGCTGAAGAAGAGGAAGCCCCTGCTTGA

Coding sequence (CDS)

ATGAAGGTAACAAATCCCGTCCCCACTTTCTCTCTCTCAATTTTCGATTCCCCCAATTTTCCCGCCGTTGATCTCAAGTTTTCCGTTTGTTTCCCGGGAAAAAATATGAGAGAAATCCTCCACATTCAGGGCGGCCAATGTGGCAATCAGATCGGTGCGAAGTTCTGGGAGGTCATTTGCGACGAACATGGCATTGACCACACCGGCAAATACAGCGGCGATTCTGAGCTTCAACTCGAGCGGATTAATGTCTATTACAATGAGGCTAGTGGTGGTAGGTATGTTCCTCGTGCCGTTCTTATGGATCTCGAGCCTGGAACCATGGATTCCGTCAGATCCGGAACCTTTGGCCAGATCTTCCGTCCCGATAACTTCGTTTTTGGTCAGTCTGGGGCTGGGAATAATTGGGCGAAGGGACATTACACCGAAGGAGCTGAGCTAATCGATTCTGTTCTCGATGTTGTTAGGAAGGAGGCTGAGAATTGTGATTGCTTGCAAGGATTCCAAGTTTGTCATTCTTTGGGTGGAGGCACTGGCTCTGGAATGGGAACACTTCTGATTTCAAAGATCAGGGAGGAGTTCCCAGATCGCATGATGTTGGCATTTTCTGTATTTCCTTCTCCCAAGGTTTCAGACACAGTTGTAGAACCATACAATGCCACTTTGTCTGTTCACCAGCTTGTGGAGAATGCTGATGAATGCATGGTCCTTGACAATGAAGCTCTCTACGATATTTGCTTCCGAACACTCAAGCTTGCTACTCCTACATACAATACCGGAATTGACTTGGAGATGTTCAGGAGGGTTAGTGAGCAGTTCACAGCCATGTTCAGGCGCAAGGCCTTCTTGCATTGGTACACCGGTGAAGGAATGGACGAAATGGAGTTCACCGAGGCTGAGAGTAACATGAACGATCTGGTCGCCGAGTATCAGCAGTACCAGGATGCGACTGCCGACGAAGAGTTCGAAGCTGAAGAAGAGGAAGCCCCTGCTTGA

Protein sequence

MKVTNPVPTFSLSIFDSPNFPAVDLKFSVCFPGKNMREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTYNTGIDLEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEFEAEEEEAPA

Homology

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BLAST of Cp4.1LG20g05770 vs. ExPASy Swiss-Prot
Match: P37832 (Tubulin beta-7 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB7 PE=2 SV=2)

HSP 1 Score: 513.5 bits (1321), Expect = 1.8e-144
Identity = 279/443 (62.98%), Postives = 287/443 (64.79%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHG+D TG+Y+GDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDSVRSG FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTY------------------ 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT+                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240

Query: 276 ------------------------------------------------------------ 332
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

[Close]

BLAST of Cp4.1LG20g05770 vs. ExPASy Swiss-Prot
Match: Q41784 (Tubulin beta-7 chain OS=Zea mays OX=4577 GN=TUBB7 PE=2 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 1.2e-143
Identity = 279/441 (63.27%), Postives = 286/441 (64.85%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDSVRSG FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTY------------------ 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT+                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240

Query: 276 ------------------------------------------------------------ 329
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

[Close]

BLAST of Cp4.1LG20g05770 vs. ExPASy Swiss-Prot
Match: Q40665 (Tubulin beta-3 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB3 PE=2 SV=2)

HSP 1 Score: 510.4 bits (1313), Expect = 1.6e-143
Identity = 278/440 (63.18%), Postives = 284/440 (64.55%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDSVRSG +GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTY------------------ 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT+                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240

Query: 276 ------------------------------------------------------------ 329
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

[Close]

BLAST of Cp4.1LG20g05770 vs. ExPASy Swiss-Prot
Match: Q9ZPP0 (Tubulin beta-1 chain OS=Eleusine indica OX=29674 GN=TUBB1 PE=2 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 4.5e-143
Identity = 279/445 (62.70%), Postives = 287/445 (64.49%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEASGGRFV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDSVRSG FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTY------------------ 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT+                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240

Query: 276 ------------------------------------------------------------ 332
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

[Close]

BLAST of Cp4.1LG20g05770 vs. ExPASy Swiss-Prot
Match: Q9ZRB0 (Tubulin beta-3 chain OS=Triticum aestivum OX=4565 GN=TUBB3 PE=2 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 5.9e-143
Identity = 276/440 (62.73%), Postives = 286/440 (65.00%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHGID TGKY+GDS+LQLERINVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDQTGKYAGDSDLQLERINVYYNEASGGRFV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDS+RSG +GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTYN----------------- 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT+                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240

Query: 276 ------------------------------------------------------------ 329
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

[Close]

BLAST of Cp4.1LG20g05770 vs. NCBI nr
Match: KAF9839904.1 (hypothetical protein H0E87_007744 [Populus deltoides])

HSP 1 Score: 562 bits (1448), Expect = 8.58e-201
Identity = 277/294 (94.22%), Postives = 284/294 (96.60%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHGID +G+YSGDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDQSGRYSGDSDLQLERINVYYNEASGGRYV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDSVRSG FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTYNTGIDLEMFRRVSEQFTA 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT+N+    EMFRRVSEQFTA
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTWNSTSIQEMFRRVSEQFTA 240

Query: 276 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEE-FEAEEEE 328
           MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDAT DEE +E EEEE
Sbjct: 241 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATIDEEEYEEEEEE 294

[Close]

BLAST of Cp4.1LG20g05770 vs. NCBI nr
Match: MQL97429.1 (hypothetical protein [Colocasia esculenta])

HSP 1 Score: 557 bits (1436), Expect = 8.68e-199
Identity = 277/304 (91.12%), Postives = 284/304 (93.42%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHGID TGKYSGDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDPTGKYSGDSDLQLERINVYYNEASGGRYV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDSVRSG FGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTY-----------NTGIDLE 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT            N+    E
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCWGLKMAATFIGNSTSIQE 240

Query: 276 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEFEA 328
           MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA+E++E 
Sbjct: 241 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEDYEE 300

[Close]

BLAST of Cp4.1LG20g05770 vs. NCBI nr
Match: AQK68709.1 (Tubulin beta-4 chain [Zea mays])

HSP 1 Score: 553 bits (1426), Expect = 2.59e-197
Identity = 272/297 (91.58%), Postives = 280/297 (94.28%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEA GGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEAGGGRFV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDSVRSG +GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT---------YNTGIDLEMF 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT         ++T    EMF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCTCISQAFCHHTICSKEMF 240

Query: 276 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEFE 323
           RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA+EE E
Sbjct: 241 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEEE 297

[Close]

BLAST of Cp4.1LG20g05770 vs. NCBI nr
Match: THU44065.1 (hypothetical protein C4D60_Mb02t03430 [Musa balbisiana])

HSP 1 Score: 553 bits (1424), Expect = 5.84e-197
Identity = 276/304 (90.79%), Postives = 281/304 (92.43%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHGID TGKYSGDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDGTGKYSGDSDLQLERINVYYNEASGGRYV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDS+RSG  GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGPVGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTY-----------NTGIDLE 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLA PT            N+    E
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTCEGVKMASTFIGNSTSIQE 240

Query: 276 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEFEA 328
           MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEE+E 
Sbjct: 241 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEYEE 300

[Close]

BLAST of Cp4.1LG20g05770 vs. NCBI nr
Match: TVU08523.1 (hypothetical protein EJB05_41929 [Eragrostis curvula])

HSP 1 Score: 552 bits (1423), Expect = 8.30e-197
Identity = 274/304 (90.13%), Postives = 284/304 (93.42%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDH+GKY+GDS+LQLERINVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYAGDSDLQLERINVYYNEASGGRFV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDSVRSG +GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTY-----------NTGIDLE 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT            N+    E
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCKGLKMASTFIGNSTSIQE 240

Query: 276 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEFEA 328
           MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA++E + 
Sbjct: 241 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAEDEEDY 300

[Close]

BLAST of Cp4.1LG20g05770 vs. ExPASy TrEMBL
Match: A0A1D6H1F3 (Tubulin beta chain OS=Zea mays OX=4577 GN=100383576 PE=3 SV=1)

HSP 1 Score: 553 bits (1426), Expect = 1.26e-197
Identity = 272/297 (91.58%), Postives = 280/297 (94.28%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKY+GDS+LQLERINVYYNEA GGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYAGDSDLQLERINVYYNEAGGGRFV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDSVRSG +GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT---------YNTGIDLEMF 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT         ++T    EMF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCTCISQAFCHHTICSKEMF 240

Query: 276 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEFE 323
           RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA+EE E
Sbjct: 241 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAEEEEE 297

[Close]

BLAST of Cp4.1LG20g05770 vs. ExPASy TrEMBL
Match: A0A4S8I806 (Tubulin beta chain OS=Musa balbisiana OX=52838 GN=C4D60_Mb02t03430 PE=3 SV=1)

HSP 1 Score: 553 bits (1424), Expect = 2.83e-197
Identity = 276/304 (90.79%), Postives = 281/304 (92.43%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHGID TGKYSGDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDGTGKYSGDSDLQLERINVYYNEASGGRYV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDS+RSG  GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGPVGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTY-----------NTGIDLE 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLA PT            N+    E
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTCEGVKMASTFIGNSTSIQE 240

Query: 276 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEFEA 328
           MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEE+E 
Sbjct: 241 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEYEE 300

[Close]

BLAST of Cp4.1LG20g05770 vs. ExPASy TrEMBL
Match: A0A5J9TAX7 (Tubulin beta chain OS=Eragrostis curvula OX=38414 GN=EJB05_41929 PE=3 SV=1)

HSP 1 Score: 552 bits (1423), Expect = 4.02e-197
Identity = 274/304 (90.13%), Postives = 284/304 (93.42%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDH+GKY+GDS+LQLERINVYYNEASGGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHSGKYAGDSDLQLERINVYYNEASGGRFV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDSVRSG +GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTY-----------NTGIDLE 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPT            N+    E
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTCKGLKMASTFIGNSTSIQE 240

Query: 276 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEFEA 328
           MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA++E + 
Sbjct: 241 MFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAEDEEDY 300

[Close]

BLAST of Cp4.1LG20g05770 vs. ExPASy TrEMBL
Match: A0A4S8K1U6 (Tubulin beta chain OS=Musa balbisiana OX=52838 GN=C4D60_Mb08t06400 PE=3 SV=1)

HSP 1 Score: 551 bits (1421), Expect = 1.01e-196
Identity = 277/311 (89.07%), Postives = 284/311 (91.32%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHGID TGKYSGDS+LQLERINVY+NEASGGRYV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDGTGKYSGDSDLQLERINVYFNEASGGRYV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDSVRSG FGQ+FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPFGQVFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTY-----------------N 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLA P+Y                 N
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPSYMPFSVRWGLKMASTFVGN 240

Query: 276 TGIDLEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 328
           +    EMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA
Sbjct: 241 STSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 300

[Close]

BLAST of Cp4.1LG20g05770 vs. ExPASy TrEMBL
Match: A0A4S8JM14 (Tubulin beta chain OS=Musa balbisiana OX=52838 GN=C4D60_Mb01t08080 PE=3 SV=1)

HSP 1 Score: 550 bits (1417), Expect = 2.95e-196
Identity = 274/303 (90.43%), Postives = 283/303 (93.40%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILH+QGGQCGNQIGAKFWEVICDEHGID TGKYSGDS+LQLERINVYYNEASGGRYV
Sbjct: 1   MREILHVQGGQCGNQIGAKFWEVICDEHGIDGTGKYSGDSDLQLERINVYYNEASGGRYV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDS+RSG  GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSIRSGPVGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTY---------NTGIDLEMF 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+ P++         N+    EMF
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSNPSWLKMASTFIGNSTSIQEMF 240

Query: 276 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEE-FEAE 328
           RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEE +E E
Sbjct: 241 RRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEEYEEE 300

[Close]

BLAST of Cp4.1LG20g05770 vs. TAIR 10
Match: AT1G75780.1 (tubulin beta-1 chain )

HSP 1 Score: 497.7 bits (1280), Expect = 7.4e-141
Identity = 270/441 (61.22%), Postives = 286/441 (64.85%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDS-ELQLERINVYYNEASGGRY 95
           MREILH+QGGQCGNQIG+KFWEVICDEHG+D TG+Y+GDS +LQLERINVYYNEASGGRY
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60

Query: 96  VPRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 155
           VPRAVLMDLEPGTMDS+RSG +GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDV
Sbjct: 61  VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120

Query: 156 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTV 215
           VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180

Query: 216 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTYN---------------- 275
           VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP++                 
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCS 240

Query: 276 ------------------------------------------------------------ 329
                                                                       
Sbjct: 241 LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNM 300

[Close]

BLAST of Cp4.1LG20g05770 vs. TAIR 10
Match: AT1G20010.1 (tubulin beta-5 chain )

HSP 1 Score: 496.5 bits (1277), Expect = 1.6e-140
Identity = 272/443 (61.40%), Postives = 285/443 (64.33%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGD-SELQLERINVYYNEASGGRY 95
           MREILHIQGGQCGNQIG+KFWEVICDEHGID TG+YSGD ++LQLERINVYYNEASGGRY
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60

Query: 96  VPRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDV 155
           VPRAVLMDLEPGTMDS+RSG FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDV
Sbjct: 61  VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120

Query: 156 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTV 215
           VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTV
Sbjct: 121 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTV 180

Query: 216 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTY----------------- 275
           VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP++                 
Sbjct: 181 VEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCS 240

Query: 276 ------------------------------------------------------------ 329
                                                                       
Sbjct: 241 LRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNM 300

[Close]

BLAST of Cp4.1LG20g05770 vs. TAIR 10
Match: AT5G44340.1 (tubulin beta chain 4 )

HSP 1 Score: 494.6 bits (1272), Expect = 6.3e-140
Identity = 271/441 (61.45%), Postives = 282/441 (63.95%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTG+Y GDS LQLERI+VY+NEASGG+YV
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDS+RSG FGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAEN DCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMM+ FSVFPSPKVSDTVV
Sbjct: 121 RKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTY------------------ 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLA PT+                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCL 240

Query: 276 ------------------------------------------------------------ 329
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMM 300

[Close]

BLAST of Cp4.1LG20g05770 vs. TAIR 10
Match: AT2G29550.1 (tubulin beta-7 chain )

HSP 1 Score: 493.8 bits (1270), Expect = 1.1e-139
Identity = 270/441 (61.22%), Postives = 283/441 (64.17%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIG+KFWEV+  EHGID TG+Y GDSELQLER+NVYYNEAS GRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDSVRSG +GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMM+ FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTYN----------------- 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TP++                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCL 240

Query: 276 ------------------------------------------------------------ 330
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRNLTVPELTQQMWDAKNMM 300

[Close]

BLAST of Cp4.1LG20g05770 vs. TAIR 10
Match: AT5G62690.1 (tubulin beta chain 2 )

HSP 1 Score: 491.9 bits (1265), Expect = 4.1e-139
Identity = 267/440 (60.68%), Postives = 282/440 (64.09%), Query Frame = 0


Query: 36  MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSELQLERINVYYNEASGGRYV 95
           MREILHIQGGQCGNQIGAKFWEV+C EHGID TG+Y+GDS+LQLERINVYYNEAS GR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 96  PRAVLMDLEPGTMDSVRSGTFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 155
           PRAVLMDLEPGTMDS+RSG +GQ FRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 156 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLAFSVFPSPKVSDTVV 215
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE+PDRMML FSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 216 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTYN----------------- 275
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP++                  
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 276 ------------------------------------------------------------ 329
                                                                       
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

The following BLAST results are available for this feature:

BLAST of Cp4.1LG20g05770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P37832	1.8e-144	62.98	Tubulin beta-7 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB7 PE=2 SV=2	[more]
Q41784	1.2e-143	63.27	Tubulin beta-7 chain OS=Zea mays OX=4577 GN=TUBB7 PE=2 SV=1	[more]
Q40665	1.6e-143	63.18	Tubulin beta-3 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB3 PE=2 SV=2	[more]
Q9ZPP0	4.5e-143	62.70	Tubulin beta-1 chain OS=Eleusine indica OX=29674 GN=TUBB1 PE=2 SV=1	[more]
Q9ZRB0	5.9e-143	62.73	Tubulin beta-3 chain OS=Triticum aestivum OX=4565 GN=TUBB3 PE=2 SV=1	[more]

BLAST of Cp4.1LG20g05770 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF9839904.1	8.58e-201	94.22	hypothetical protein H0E87_007744 [Populus deltoides]	[more]
MQL97429.1	8.68e-199	91.12	hypothetical protein [Colocasia esculenta]	[more]
AQK68709.1	2.59e-197	91.58	Tubulin beta-4 chain [Zea mays]	[more]
THU44065.1	5.84e-197	90.79	hypothetical protein C4D60_Mb02t03430 [Musa balbisiana]	[more]
TVU08523.1	8.30e-197	90.13	hypothetical protein EJB05_41929 [Eragrostis curvula]	[more]

BLAST of Cp4.1LG20g05770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1D6H1F3	1.26e-197	91.58	Tubulin beta chain OS=Zea mays OX=4577 GN=100383576 PE=3 SV=1	[more]
A0A4S8I806	2.83e-197	90.79	Tubulin beta chain OS=Musa balbisiana OX=52838 GN=C4D60_Mb02t03430 PE=3 SV=1	[more]
A0A5J9TAX7	4.02e-197	90.13	Tubulin beta chain OS=Eragrostis curvula OX=38414 GN=EJB05_41929 PE=3 SV=1	[more]
A0A4S8K1U6	1.01e-196	89.07	Tubulin beta chain OS=Musa balbisiana OX=52838 GN=C4D60_Mb08t06400 PE=3 SV=1	[more]
A0A4S8JM14	2.95e-196	90.43	Tubulin beta chain OS=Musa balbisiana OX=52838 GN=C4D60_Mb01t08080 PE=3 SV=1	[more]

BLAST of Cp4.1LG20g05770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75780.1	7.4e-141	61.22	tubulin beta-1 chain	[more]
AT1G20010.1	1.6e-140	61.40	tubulin beta-5 chain	[more]
AT5G44340.1	6.3e-140	61.45	tubulin beta chain 4	[more]
AT2G29550.1	1.1e-139	61.22	tubulin beta-7 chain	[more]
AT5G62690.1	4.1e-139	60.68	tubulin beta chain 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 296..316
None	No IPR available	PANTHER	PTHR11588:SF387	TUBULIN BETA CHAIN	coord: 36..259
None	No IPR available	PANTHER	PTHR11588:SF387	TUBULIN BETA CHAIN	coord: 263..325
None	No IPR available	CDD	cd02187	beta_tubulin	coord: 37..314 e-value: 2.49428E-176 score: 493.237
IPR000217	Tubulin	PRINTS	PR01161	TUBULIN	coord: 186..207 score: 53.78 coord: 211..224 score: 79.11 coord: 86..105 score: 68.16 coord: 167..185 score: 79.04 coord: 128..139 score: 76.26 coord: 225..245 score: 67.82 coord: 45..65 score: 74.61 coord: 141..165 score: 70.19
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 36..259
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 263..325
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 187..199 score: 86.99 coord: 247..259 score: 66.51 coord: 143..161 score: 87.58 coord: 76..93 score: 78.29 coord: 123..134 score: 94.76
IPR003008	Tubulin/FtsZ, GTPase domain	SMART	SM00864	Tubulin_4	coord: 82..281 e-value: 3.3E-53 score: 192.8
IPR003008	Tubulin/FtsZ, GTPase domain	PFAM	PF00091	Tubulin	coord: 38..246 e-value: 2.2E-69 score: 233.6
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	GENE3D	3.40.50.1440	Tubulin/FtsZ, GTPase domain	coord: 36..310 e-value: 9.3E-111 score: 371.5
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	SUPERFAMILY	52490	Tubulin nucleotide-binding domain-like	coord: 36..258
IPR017975	Tubulin, conserved site	PROSITE	PS00227	TUBULIN	coord: 175..181
IPR008280	Tubulin/FtsZ, C-terminal	SUPERFAMILY	55307	Tubulin C-terminal domain-like	coord: 253..314

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG20g05770.1	Cp4.1LG20g05770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005200	structural constituent of cytoskeleton