Cp4.1LG20g02030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTTCAGTTCCCATTAAAACCTTTTTTCTCTCTGAAACAAATTCTCAGTCAAAACCTCTGCTCGAATTTCAGCGTTATCCTCAACTCTTCGTCTTCTTCATCTCTCGATTCGACCTTTTGCTTTCTTCCTCCGTCTTCTTCTTCCACCATTTCGGAAAACCACGACTCTACTGAACCAGAGATTCGCCGGTGGTTTGATTGCTAATTAAGAGTATGTTTTCATCTTCTTCTCTCTTTTTTCCTTTCCTTTTATCTTCATTGCTCGTTCTCTGTAATCGATACTTCCACTGTGCCGCTGAATTTGCTTTTCCTTTTTTATTTCTCTCAATTTTCAATTCCTTCTGTTATTTCCTTTTTCACCAGCCGGATTTTCCGATCAGGTGCCTCATTCTTCTTTATATTCAACCAATTCGTCAATCATCCACCACCGGAAACGCACATTCCTCTGAACGAAACGAAGACCTAGCCGGAATTTCGATCAGAGGAGGCGAAAAGAACGAGAAAATCGATGGCTCAAACGGCGCCGTTTAGTTCCTCTAATTTGGAACGGTTTCTTCAATGCGTTACTCCTTGCGTTCCTTGGCGAACTCTTCCTCGGGTAAAAATAAATAAATAAATATATATTCAGCATTTTATTTTCTTTAATTATTTAATTATTATTTATTATTTCATTATAAATCCTACATTTTCCCCCTTTCCCTCCATTATAATTTTTCATTTATTTATTTCTGAATTTGTATCTGCAAAACCATGTGACTCACGATGTGGATAATTTTTATTATATAATTATTTTAATTTCCACCTCAACCCTAATTTTGGAAATTGAAAATTCCCCCATTTTCCACCACCAATATAATTTTCTCCATTTCCCCATAGTCAGCTTTATTTATTTATTTATTAATTAAATAAAATAAAACTAAATCATGGAAAGGAATTAACAAAAGGTTCATTCTTAAATTTCTTACCATATCTTAATTTTACGCAAATTTCTTTCCATAACAAATAATTAATGTAGTGGGCCCTTAATGGGCCGACGTAAGTCATAATTTATTATTTATTTAAAGATTTAATGTCATTTTTTGAAGCTCAATTTAATTTAGATAAATAAGCAAATTTATTATTTTCGTCGAAGTTGGCCCCACCCTTATCTTCAGAATTTCTTATTTTTGTCATTTGCTTGAAAAATAAATTAAATAGATAGGACATACGACATGTTTTCAAATGTCTTGTCACTATAAGTCTTCCCTCTGCGCCACGTGGCATTTTTTTATTATTTTAATTTTAATTTTTTTTTTCGGCCATGAATAAATACTTTCATAAATTAAATTTCATTGTTGTGGGTCATCAGAAAAATTGTCAAGTGTCTTTAACGTTAAAGTCTTCAAAATGAGATTTAATGGTTTTTTTTATCTTTTTTGCTCATTTATTGATGATATCGCTGCATGTTATCCCTTTGATTGCTTCCTCTAAGCCTATGATGTTTCTTTTCCTTATAGAGTTGTCTTCATGATCTCAATAGTCAGTGGCAACAACCTGATAAAGATACCATTCGGTACTTCACGCTTGGTGAGCTGTGGGATTACTACGATGAATGGAGTGCATATGGTGCTGGAATACCGTTACAATTGAATGCTTTTGAAACTGCTACTCAATTCTACGTGCCTTATCTGTCTGCAATTCAGATCTACACAAGCAAGTCTGTTCCACCTTCCAGGTATACTGATGCAACTTTCATTTCCTTCTGCTGCCTTTGAAGTTTGAAAACTGTGAGATCCTATGCTAGTTGGAGAGGGGAACGAAGCACTCCTTGTAAGGGTATGGAAACCTCTCCTTAACAGACGTGTTTTAAAATCGTGAGACTAACGGCAATACGTAACGAGGCAAAGTGGACAATATCTGCTAGCGGTGGGGTTGGGCTGTTATAAATGGTATCAGAGCCAGACATTTAGCAGTGTGCCAGTGAGGACGCTAGGCCCTCAAGGGGGTGGATTGTAGTATCACACATTGGTTGAAGAGGAGAACAAAACACTCCTTATAAGGGTGTGGAAACCTCTTCCTAGCAGACGCGTTTTGAAACCGTGAGGCTGATGGTGACACGTAACGAGCCAAAGCGAACAATATCTTCTAGCGGTGGGCTTGAGCTGTTACAAATGGTATTAGAGTTAGTCATTGGATGGTGCAAGACACTGGTCGGAGTAGGGCTAGATCCTCTTCATAGTAGACGCGTTTTAAAACCTTGAGGGGAAACCTAGAAGGGAAAGCCCAAAGAAGACAATATCTGCTAGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTCTCTAACGGTGTGCCAACGAGAACACTGGTCCCTGAGGGGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGGAGCACTCCTTATAAGGGTGTGGAAACCTCTCCGTAGTAGACGTGTTTTAAAATCGTGAAGCTGACAGCGATACGTAACGGGTCAAAGCGGATAATATCTGCTAGCGGTGAGCTTGAACTGTTTTGTAACAGATATGTTTCTTTTTGACAAATGGTTGTTTATTGGAATTTATGAAAGAGGGAATATTAGTGTGAGTTTTAAAGGAAATGTTTGATATACAATTTAGTTTTTAGTGCATTGTGTTGCAAATAAGCTATATTTGTTCGAGTTGTGTGTGTAGAAGCCGAAGATATGATAGTGACATGGCAGAATGTGAAAGCGATTCTTGGAGTGACGATAGCTGGAGTGACATCTTGTCAAGATCCGTGAGCAACAACTCTAGCAGGACATGGGATGCTGTTTCTGAAGATTCGATCTTCGACCAGGAGGGATCGTGGCCGCTGAGGGAAAAACTTGGCTACCTCTCTTTACAGTATATGGAGATGTCTTCTCCTTATTGGAGAGTGCCTTTTATGGACAAGGTAGATCCTTTGTTGTTCTAAATTGATCATGGTATTTATCTTCACGGATAGAAACTGATGTTTTCAAATTTAACAGCTCTATATTTGTCGATAAGCCTTCGATAGAAGATCGAATGATAGTTTTGATATTCAAATGAAAAAAGAAAATAGGTGGAATTTAGATGGTCGAGTACTGCAAGAACACATAAAGCATTGAAGAAGTGTAAAATGATATTATCAGCATCTTCTTCTTTGCTTATGTTAGACGATCTGCATTTCAGATAAGGGAACTAACTCAAAACTATCCAGCACTAACTACACTTAGGAGTGTGGATCTTTCTCCAGCTAGTTGGATGGCTGTTTCCTGGTAAAATTCGCCTTCCCTATCGACCGCTCCACGCAAAAGCTTATTTGCCGTTTCCTTTTGCTTATTGGTTCTGTTCAATGCTTTTAACTTGATTCAGGTACCCTATTTATCATATCCCTAGTCAGAAAAACGACAAAGACTTCGCGACGTGCTTTCTAACGTATCATACATTGTCATCATCTTTTCAAGGTGTGGGACTATCAATGTTTCTTTTCAGAAATGTTATGAACCAATATCTGTCTATACACTACAAAGTTAAATGTTTGATGACTGCAGATTGCTCTATGGATCATGAAGGGAAAGATGGATGTAGTTGTTCCGAATCCGATACCGGGGGTCAAATCGATGGCAAAACTAGTACTTCTACTTCTACTAGCCTTTCTCCATTTGGGTTAGCCACTTATAGAATGCAGGGAGACCTCTGGTTGAAGCCAGACACATCTGACTACGACCGAATCGTCGATCTCTATCATGCAGCTGATTCATGGTTGAAGCAGCTCGGCGTCCAGCATCACGACTTCAACTTCTTTTCCCTGCACTCGAGCATGTAAATAATCAGTTTCCATTTCGTAGGCTGGCTTACTGATTCTCCTTCATGCAGGTTGTATATTTCTGTTCATGCTTTTGCAACCAACATGAGAAGCTCTTACCTCTGCCTCTGCTCACTGCAGTTCATTTCACAGTTAGAAAACCAGGAGTTTTGATTCAAAACCAACGCTTTTGTACTTTTTTGCTCATGAAAAATGATGAACATTGCTGTGGTTTAAAAGCAGAGGCATGGGTGAGGGGTTTTTTCTTTGGATTCAGGCTTCAGTTTTTCTCCCCAGTCTGCTTTTAACCTTTTATGGTATGAACTTCCCTAGACATGTAGGTTGCTATTAAGACATGCCTGATTGGGAGTTGTTTTGTAATTGAGTGTCAATTTTGTTTATCTGGTGGAGTTGTAATGTAAGTTTTTGTTCTTGTTGTTCTTGTTGTTCTCTGTCTTTACTTTAATCGTTCTTCAATGGTTGC CTCTTCAGTTCCCATTAAAACCTTTTTTCTCTCTGAAACAAATTCTCAGTCAAAACCTCTGCTCGAATTTCAGCGTTATCCTCAACTCTTCGTCTTCTTCATCTCTCGATTCGACCTTTTGCTTTCTTCCTCCGTCTTCTTCTTCCACCATTTCGGAAAACCACGACTCTACTGAACCAGAGATTCGCCGGTGGTTTGATTGCTAATTAAGACCGGATTTTCCGATCAGGTGCCTCATTCTTCTTTATATTCAACCAATTCGTCAATCATCCACCACCGGAAACGCACATTCCTCTGAACGAAACGAAGACCTAGCCGGAATTTCGATCAGAGGAGGCGAAAAGAACGAGAAAATCGATGGCTCAAACGGCGCCGTTTAGTTCCTCTAATTTGGAACGGTTTCTTCAATGCGTTACTCCTTGCGTTCCTTGGCGAACTCTTCCTCGGAGTTGTCTTCATGATCTCAATAGTCAGTGGCAACAACCTGATAAAGATACCATTCGGTACTTCACGCTTGGTGAGCTGTGGGATTACTACGATGAATGGAGTGCATATGGTGCTGGAATACCGTTACAATTGAATGCTTTTGAAACTGCTACTCAATTCTACGTGCCTTATCTGTCTGCAATTCAGATCTACACAAGCAAAAGCCGAAGATATGATAGTGACATGGCAGAATGTGAAAGCGATTCTTGGAGTGACGATAGCTGGAGTGACATCTTGTCAAGATCCGTGAGCAACAACTCTAGCAGGACATGGGATGCTGTTTCTGAAGATTCGATCTTCGACCAGGAGGGATCGTGGCCGCTGAGGGAAAAACTTGGCTACCTCTCTTTACAGTATATGGAGATGTCTTCTCCTTATTGGAGAGTGCCTTTTATGGACAAGATAAGGGAACTAACTCAAAACTATCCAGCACTAACTACACTTAGGAGTGTGGATCTTTCTCCAGCTAGTTGGATGGCTGTTTCCTGGTACCCTATTTATCATATCCCTAGTCAGAAAAACGACAAAGACTTCGCGACGTGCTTTCTAACGTATCATACATTGTCATCATCTTTTCAAGATTGCTCTATGGATCATGAAGGGAAAGATGGATGTAGTTGTTCCGAATCCGATACCGGGGGTCAAATCGATGGCAAAACTAGTACTTCTACTTCTACTAGCCTTTCTCCATTTGGGTTAGCCACTTATAGAATGCAGGGAGACCTCTGGTTGAAGCCAGACACATCTGACTACGACCGAATCGTCGATCTCTATCATGCAGCTGATTCATGGTTGAAGCAGCTCGGCGTCCAGCATCACGACTTCAACTTCTTTTCCCTGCACTCGAGCATGTAAATAATCAGTTTCCATTTCGTAGGCTGGCTTACTGATTCTCCTTCATGCAGGTTGTATATTTCTGTTCATGCTTTTGCAACCAACATGAGAAGCTCTTACCTCTGCCTCTGCTCACTGCAGTTCATTTCACAGTTAGAAAACCAGGAGTTTTGATTCAAAACCAACGCTTTTGTACTTTTTTGCTCATGAAAAATGATGAACATTGCTGTGGTTTAAAAGCAGAGGCATGGGTGAGGGGTTTTTTCTTTGGATTCAGGCTTCAGTTTTTCTCCCCAGTCTGCTTTTAACCTTTTATGGTATGAACTTCCCTAGACATGTAGGTTGCTATTAAGACATGCCTGATTGGGAGTTGTTTTGTAATTGAGTGTCAATTTTGTTTATCTGGTGGAGTTGTAATGTAAGTTTTTGTTCTTGTTGTTCTTGTTGTTCTCTGTCTTTACTTTAATCGTTCTTCAATGGTTGC ATGGCTCAAACGGCGCCGTTTAGTTCCTCTAATTTGGAACGGTTTCTTCAATGCGTTACTCCTTGCGTTCCTTGGCGAACTCTTCCTCGGAGTTGTCTTCATGATCTCAATAGTCAGTGGCAACAACCTGATAAAGATACCATTCGGTACTTCACGCTTGGTGAGCTGTGGGATTACTACGATGAATGGAGTGCATATGGTGCTGGAATACCGTTACAATTGAATGCTTTTGAAACTGCTACTCAATTCTACGTGCCTTATCTGTCTGCAATTCAGATCTACACAAGCAAAAGCCGAAGATATGATAGTGACATGGCAGAATGTGAAAGCGATTCTTGGAGTGACGATAGCTGGAGTGACATCTTGTCAAGATCCGTGAGCAACAACTCTAGCAGGACATGGGATGCTGTTTCTGAAGATTCGATCTTCGACCAGGAGGGATCGTGGCCGCTGAGGGAAAAACTTGGCTACCTCTCTTTACAGTATATGGAGATGTCTTCTCCTTATTGGAGAGTGCCTTTTATGGACAAGATAAGGGAACTAACTCAAAACTATCCAGCACTAACTACACTTAGGAGTGTGGATCTTTCTCCAGCTAGTTGGATGGCTGTTTCCTGGTACCCTATTTATCATATCCCTAGTCAGAAAAACGACAAAGACTTCGCGACGTGCTTTCTAACGTATCATACATTGTCATCATCTTTTCAAGATTGCTCTATGGATCATGAAGGGAAAGATGGATGTAGTTGTTCCGAATCCGATACCGGGGGTCAAATCGATGGCAAAACTAGTACTTCTACTTCTACTAGCCTTTCTCCATTTGGGTTAGCCACTTATAGAATGCAGGGAGACCTCTGGTTGAAGCCAGACACATCTGACTACGACCGAATCGTCGATCTCTATCATGCAGCTGATTCATGGTTGAAGCAGCTCGGCGTCCAGCATCACGACTTCAACTTCTTTTCCCTGCACTCGAGCATGTAA MAQTAPFSSSNLERFLQCVTPCVPWRTLPRSCLHDLNSQWQQPDKDTIRYFTLGELWDYYDEWSAYGAGIPLQLNAFETATQFYVPYLSAIQIYTSKSRRYDSDMAECESDSWSDDSWSDILSRSVSNNSSRTWDAVSEDSIFDQEGSWPLREKLGYLSLQYMEMSSPYWRVPFMDKIRELTQNYPALTTLRSVDLSPASWMAVSWYPIYHIPSQKNDKDFATCFLTYHTLSSSFQDCSMDHEGKDGCSCSESDTGGQIDGKTSTSTSTSLSPFGLATYRMQGDLWLKPDTSDYDRIVDLYHAADSWLKQLGVQHHDFNFFSLHSSM Homology
BLAST of Cp4.1LG20g02030 vs. NCBI nr
Match: XP_023519160.1 (uncharacterized protein LOC111782609 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023519161.1 uncharacterized protein LOC111782609 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 672 bits (1734), Expect = 6.88e-244 Identity = 327/333 (98.20%), Postives = 327/333 (98.20%), Query Frame = 0
BLAST of Cp4.1LG20g02030 vs. NCBI nr
Match: KAG6584275.1 (hypothetical protein SDJN03_20207, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 668 bits (1724), Expect = 2.30e-242 Identity = 324/333 (97.30%), Postives = 327/333 (98.20%), Query Frame = 0
BLAST of Cp4.1LG20g02030 vs. NCBI nr
Match: XP_022923969.1 (uncharacterized protein LOC111431528 isoform X1 [Cucurbita moschata] >XP_022923970.1 uncharacterized protein LOC111431528 isoform X1 [Cucurbita moschata]) HSP 1 Score: 662 bits (1709), Expect = 4.46e-240 Identity = 322/333 (96.70%), Postives = 325/333 (97.60%), Query Frame = 0
BLAST of Cp4.1LG20g02030 vs. NCBI nr
Match: XP_023001164.1 (uncharacterized protein LOC111495384 isoform X1 [Cucurbita maxima] >XP_023001165.1 uncharacterized protein LOC111495384 isoform X1 [Cucurbita maxima]) HSP 1 Score: 660 bits (1702), Expect = 5.20e-239 Identity = 321/333 (96.40%), Postives = 325/333 (97.60%), Query Frame = 0
BLAST of Cp4.1LG20g02030 vs. NCBI nr
Match: KAG7019872.1 (hypothetical protein SDJN02_18837, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 651 bits (1679), Expect = 9.52e-236 Identity = 315/327 (96.33%), Postives = 318/327 (97.25%), Query Frame = 0
BLAST of Cp4.1LG20g02030 vs. ExPASy TrEMBL
Match: A0A6J1EDG5 (uncharacterized protein LOC111431528 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431528 PE=4 SV=1) HSP 1 Score: 662 bits (1709), Expect = 2.16e-240 Identity = 322/333 (96.70%), Postives = 325/333 (97.60%), Query Frame = 0
BLAST of Cp4.1LG20g02030 vs. ExPASy TrEMBL
Match: A0A6J1KKF0 (uncharacterized protein LOC111495384 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495384 PE=4 SV=1) HSP 1 Score: 660 bits (1702), Expect = 2.52e-239 Identity = 321/333 (96.40%), Postives = 325/333 (97.60%), Query Frame = 0
BLAST of Cp4.1LG20g02030 vs. ExPASy TrEMBL
Match: A0A5D3BL53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002890 PE=4 SV=1) HSP 1 Score: 604 bits (1558), Expect = 2.80e-217 Identity = 296/339 (87.32%), Postives = 309/339 (91.15%), Query Frame = 0
BLAST of Cp4.1LG20g02030 vs. ExPASy TrEMBL
Match: A0A1S3ATR9 (uncharacterized protein LOC103482746 OS=Cucumis melo OX=3656 GN=LOC103482746 PE=4 SV=1) HSP 1 Score: 604 bits (1558), Expect = 2.80e-217 Identity = 296/339 (87.32%), Postives = 309/339 (91.15%), Query Frame = 0
BLAST of Cp4.1LG20g02030 vs. ExPASy TrEMBL
Match: A0A0A0LW14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G044320 PE=4 SV=1) HSP 1 Score: 603 bits (1556), Expect = 5.64e-217 Identity = 294/339 (86.73%), Postives = 309/339 (91.15%), Query Frame = 0
BLAST of Cp4.1LG20g02030 vs. TAIR 10
Match: AT1G17830.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 322.0 bits (824), Expect = 5.5e-88 Identity = 172/323 (53.25%), Postives = 225/323 (69.66%), Query Frame = 0
BLAST of Cp4.1LG20g02030 vs. TAIR 10
Match: AT4G03420.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 306.6 bits (784), Expect = 2.4e-83 Identity = 165/322 (51.24%), Postives = 211/322 (65.53%), Query Frame = 0
BLAST of Cp4.1LG20g02030 vs. TAIR 10
Match: AT1G03610.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 303.9 bits (777), Expect = 1.5e-82 Identity = 159/316 (50.32%), Postives = 202/316 (63.92%), Query Frame = 0
BLAST of Cp4.1LG20g02030 vs. TAIR 10
Match: AT1G73210.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 303.1 bits (775), Expect = 2.6e-82 Identity = 169/321 (52.65%), Postives = 214/321 (66.67%), Query Frame = 0
BLAST of Cp4.1LG20g02030 vs. TAIR 10
Match: AT1G73210.2 (Protein of unknown function (DUF789) ) HSP 1 Score: 300.8 bits (769), Expect = 1.3e-81 Identity = 168/321 (52.34%), Postives = 213/321 (66.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|