Cp4.1LG19g11550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g11550
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	B3 domain-containing transcription factor VRN1-like isoform X2
Location	Cp4.1LG19: 4932815 .. 4934387 (-)
RNA-Seq Expression	Cp4.1LG19g11550
Synteny	Cp4.1LG19g11550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACCTTCCTCCAACAATGGCGCCTTCCTCTCCTCAGTTCTTCAGAATCGTTTTACACAACAATCTCGAAGACCGAAAACTAGTAAAAACAAACCCCTCTTCTGTTTTCTATTTTTAATTTTTTTTCACGTATCTTGTTTTCCAGATGATTCCGAAGAAGTTCGTGAAAGATCATGGCGAACTTTTGTCCACTTCCGTACGTCTCAAGCTCCCGGACGGCATGGAATGGAAGGTCGGTTTGACGACGGCTCCCAACGGCGTTGTTTGGCTGCAAAATGGGTGGCACAAATTTGCAGAGCATTATAGCTTAGAGTTTGGTTCTTTATTGGTATTTAAATCAGATGGGTTTTCAACTTTTCAAACATCCATATTCGACCCAAGTGGTGTAGAAACAGAATATTGTTGCATTTTCAACGATTCAAGAGCAGAATTTACAATGGAATATGAGGATTCTGATGAAAATACAGAGAGTTCCCCCCTGCGTTTAAGTAAGAGGAAGAACAAGCCTTCAGTTCCATCTCCTCCTCAATCTCGTAAGAAAATGAAACCTGAAGAAGGTATGAACATTTTGAGTATATAGAGCTTACAGGTTCAAATAAGTGTTGTTAATGGCCAATCTATGCAGAAGGATGCCTAATCATAAAGAACATGCCAAAAACTGAAGCAGGGGTATCAAGTAGAAGGCAACAATTTGTGAACAAACCTGAAGCAGCTCAAAGATTCACCTCAAAATCAGAGAAGCCTATCTTTAAAATTGTCATGAAACAACCAAACGTACGAGGAAAATTTGCCATGGTAAGCACTTTCTTCTACAAACCCACATAAAAAAACACCTCCTTTCTTCAATTCAGCTGAAAAAATTGAAGCTTTTTGGTTCTTGTAGACTATCCCCAAAGATTTTGCAGAGAAACACTTACCTGATGACTTCGGAATCATCAAACTCCAAACCCCAAACGGTAGAAAGTGGCCACTTTTGTACAAACGCAGACGAAATCAAGAGAACTTTGTGTACTTTTCAAGTGGGTGGAAGCGTTTTGTAGAGGAAAATGTGTTGAAAGAAGGGGATATTGGGTTGTTTCAATTGATTAAGAAAGACATATTTTCATTCACCAAATTACAAGACACCTCTCCCTTTCCTTCCCCTGCAACAAACACCAGAAACCCCTGTTTTGAGGCGAACATTCTGAACAGACGCCACAAGAAATTTGTTCTGGTAACAAACAAAAAAACAAAACCCCATGTTTTATTTTCAGTTCAAAACATAGTTGAAACCATTTTATGTTGTTGATTGGCAGAACATTCCTATGGTGTTTGCAAAGGAGCATTTTTCATCCGACATGCGCTCTGCAAAGCTTCAAGTTGGGAATAGACAATGGATTGTGGCATTGAGACAATATGGTAGCTCTGTCAGATTATCAGCTGGGTGGTGCTTATTTTATGGAGACAATGGCTTGGAAGATGGAGATTCATGCTTGTTTGAGATGGTCGACACAAAAAACTGTGTTTTTAAAGTCACCATTTTCAAACATGTTTCCAGCTCTGCTTCCATGGACTAGATAGAATGTAATGTTAA

mRNA sequence

CCACCTTCCTCCAACAATGGCGCCTTCCTCTCCTCAGTTCTTCAGAATCGTTTTACACAACAATCTCGAAGACCGAAAACTAATGATTCCGAAGAAGTTCGTGAAAGATCATGGCGAACTTTTGTCCACTTCCGTACGTCTCAAGCTCCCGGACGGCATGGAATGGAAGGTCGGTTTGACGACGGCTCCCAACGGCGTTGTTTGGCTGCAAAATGGGTGGCACAAATTTGCAGAGCATTATAGCTTAGAGTTTGGTTCTTTATTGGTATTTAAATCAGATGGGTTTTCAACTTTTCAAACATCCATATTCGACCCAAGTGGTGTAGAAACAGAATATTGTTGCATTTTCAACGATTCAAGAGCAGAATTTACAATGGAATATGAGGATTCTGATGAAAATACAGAGAGTTCCCCCCTGCGTTTAAGTAAGAGGAAGAACAAGCCTTCAGTTCCATCTCCTCCTCAATCTCGTAAGAAAATGAAACCTGAAGAAGAAGGATGCCTAATCATAAAGAACATGCCAAAAACTGAAGCAGGGGTATCAAGTAGAAGGCAACAATTTGTGAACAAACCTGAAGCAGCTCAAAGATTCACCTCAAAATCAGAGAAGCCTATCTTTAAAATTGTCATGAAACAACCAAACGTACGAGGAAAATTTGCCATGACTATCCCCAAAGATTTTGCAGAGAAACACTTACCTGATGACTTCGGAATCATCAAACTCCAAACCCCAAACGGTAGAAAGTGGCCACTTTTGTACAAACGCAGACGAAATCAAGAGAACTTTGTGTACTTTTCAAGTGGGTGGAAGCGTTTTGTAGAGGAAAATGTGTTGAAAGAAGGGGATATTGGGTTGTTTCAATTGATTAAGAAAGACATATTTTCATTCACCAAATTACAAGACACCTCTCCCTTTCCTTCCCCTGCAACAAACACCAGAAACCCCTGTTTTGAGGCGAACATTCTGAACAGACGCCACAAGAAATTTGTTCTGAACATTCCTATGGTGTTTGCAAAGGAGCATTTTTCATCCGACATGCGCTCTGCAAAGCTTCAAGTTGGGAATAGACAATGGATTGTGGCATTGAGACAATATGGTAGCTCTGTCAGATTATCAGCTGGGTGGTGCTTATTTTATGGAGACAATGGCTTGGAAGATGGAGATTCATGCTTGTTTGAGATGGTCGACACAAAAAACTGTGTTTTTAAAGTCACCATTTTCAAACATGTTTCCAGCTCTGCTTCCATGGACTAGATAGAATGTAATGTTAA

Coding sequence (CDS)

ATGGCGCCTTCCTCTCCTCAGTTCTTCAGAATCGTTTTACACAACAATCTCGAAGACCGAAAACTAATGATTCCGAAGAAGTTCGTGAAAGATCATGGCGAACTTTTGTCCACTTCCGTACGTCTCAAGCTCCCGGACGGCATGGAATGGAAGGTCGGTTTGACGACGGCTCCCAACGGCGTTGTTTGGCTGCAAAATGGGTGGCACAAATTTGCAGAGCATTATAGCTTAGAGTTTGGTTCTTTATTGGTATTTAAATCAGATGGGTTTTCAACTTTTCAAACATCCATATTCGACCCAAGTGGTGTAGAAACAGAATATTGTTGCATTTTCAACGATTCAAGAGCAGAATTTACAATGGAATATGAGGATTCTGATGAAAATACAGAGAGTTCCCCCCTGCGTTTAAGTAAGAGGAAGAACAAGCCTTCAGTTCCATCTCCTCCTCAATCTCGTAAGAAAATGAAACCTGAAGAAGAAGGATGCCTAATCATAAAGAACATGCCAAAAACTGAAGCAGGGGTATCAAGTAGAAGGCAACAATTTGTGAACAAACCTGAAGCAGCTCAAAGATTCACCTCAAAATCAGAGAAGCCTATCTTTAAAATTGTCATGAAACAACCAAACGTACGAGGAAAATTTGCCATGACTATCCCCAAAGATTTTGCAGAGAAACACTTACCTGATGACTTCGGAATCATCAAACTCCAAACCCCAAACGGTAGAAAGTGGCCACTTTTGTACAAACGCAGACGAAATCAAGAGAACTTTGTGTACTTTTCAAGTGGGTGGAAGCGTTTTGTAGAGGAAAATGTGTTGAAAGAAGGGGATATTGGGTTGTTTCAATTGATTAAGAAAGACATATTTTCATTCACCAAATTACAAGACACCTCTCCCTTTCCTTCCCCTGCAACAAACACCAGAAACCCCTGTTTTGAGGCGAACATTCTGAACAGACGCCACAAGAAATTTGTTCTGAACATTCCTATGGTGTTTGCAAAGGAGCATTTTTCATCCGACATGCGCTCTGCAAAGCTTCAAGTTGGGAATAGACAATGGATTGTGGCATTGAGACAATATGGTAGCTCTGTCAGATTATCAGCTGGGTGGTGCTTATTTTATGGAGACAATGGCTTGGAAGATGGAGATTCATGCTTGTTTGAGATGGTCGACACAAAAAACTGTGTTTTTAAAGTCACCATTTTCAAACATGTTTCCAGCTCTGCTTCCATGGACTAG

Protein sequence

MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTMEYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPFPSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD

Homology

[Close]

BLAST of Cp4.1LG19g11550 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.8e-25
Identity = 93/330 (28.18%), Postives = 149/330 (45.15%), Query Frame = 0


Query: 6   PQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQ 65
           P F +++  + +++++L +P KFV    + LS +V L +PDG  W+VGL  A N  +W Q
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADN-KIWFQ 63

Query: 66  NGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCI---------FNDSRA 125
           +GW +F + YS+  G LL+F+ +G S F   IF+ S  E  Y            F  +R 
Sbjct: 64  DGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARL 123

Query: 126 EFTMEYEDSD----ENTESSPLRLS---------------------KRKNKPSVPSPPQS 185
              +E ED++     +   SPL  S                     K +     P  P+ 
Sbjct: 124 FEDLEDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKK 183

Query: 186 RKKMKPEEEGCLIIKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEK------------- 245
           R + K   +   I  + P+ +      R +F     A +R  +  E+             
Sbjct: 184 RGRKKKNADPEEINSSAPRDDD--PENRSKFYESASARKRTVTAEERERAINAAKTFEPT 243

Query: 246 -PIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPNGRKWPL--LYKRRRNQE 286
            P F++V++   +     M +P  FAEK+L    G IK+Q    ++WP+  LYK  R + 
Sbjct: 244 NPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAE-KQWPVRCLYKAGRAK- 303

[Close]

BLAST of Cp4.1LG19g11550 vs. ExPASy Swiss-Prot
Match: Q851V5 (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0621600 PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.1e-16
Identity = 82/306 (26.80%), Postives = 140/306 (45.75%), Query Frame = 0


Query: 8    FFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNG 67
            FF++++    E  +++IP +F++     +  +++L+L DG  + V + T   G + LQ+G
Sbjct: 734  FFKVMIGRFRE--RMIIPNEFLQYFRGKIPRTIKLQLRDGCTYDVQV-TKNLGKISLQSG 793

Query: 68   WHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTMEYEDSDE 127
            W  F   + L+ G  LVF  DG S  +  IF PSG E  +        +  T++      
Sbjct: 794  WKAFVTAHDLQMGDFLVFSYDGISKLKVLIFGPSGCEKVH--------SRSTLKNATHCG 853

Query: 128  NTESSPLRLSKRKNKPSVPSPPQSRKKMK-----PEEEGCLIIKN--------------- 187
                 PL +S   +   V SP    K  K      +E     I+                
Sbjct: 854  EKWEEPLHISSNSHDLPVKSPQNVSKSEKQWDSSEQENDTANIEEVALQGDDLQGHPVLN 913

Query: 188  --MPKTEAGVSSRRQQFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKF-AMTIPKDFAE 247
              +PK       ++QQ  +K  A       SE PI+  ++++  V GK   + I +++A+
Sbjct: 914  CILPKHTRLTDMQKQQLESKVGAIH-----SEIPIYGCILRKSRVHGKSQTVDICREYAD 973

Query: 248  KHLPDDFGIIKLQTPNGRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLI 291
             +LP     + LQ  +G+ W +L + +  +      S+GW RF +EN L+ GDI LF+L+
Sbjct: 974  VYLPFKELNMTLQR-HGKNWEVLCRTKDTRTK--RLSTGWSRFAQENNLQVGDICLFELL 1020

[Close]

BLAST of Cp4.1LG19g11550 vs. ExPASy Swiss-Prot
Match: Q851W5 (B3 domain-containing protein Os03g0620400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0620400 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.2e-14
Identity = 83/299 (27.76%), Postives = 125/299 (41.81%), Query Frame = 0


Query: 22  LMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGS 81
           + IP KF+   G  LS ++ L  P G+ + V +T   N  + LQ GW  F + + +E   
Sbjct: 41  MTIPNKFLDHFGGTLSRTIELVSPKGIVYIVKVTEHMNKTI-LQCGWEAFVDAHHIEEND 100

Query: 82  LLVFKSDGFSTFQTSIFDPSGVETEYCC--------IFNDSRAEFTMEYEDSDENTESSP 141
            L+F+    S F+  I D  G E  + C        +   + A   +     DE T+SS 
Sbjct: 101 SLLFRHIENSRFEVLILDSDGCEKVFTCAGIKKTSSVQERNAAPVDISRSTHDETTQSSG 160

Query: 142 LRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQQF-VNKPE----- 201
              SK+  +    S  Q  K  K  E           T++  S     + ++ P+     
Sbjct: 161 ---SKKFVRCQRASDSQRGKTAKLAETSSSGESGEEGTDSSTSEDESSYELDDPQMPPGR 220

Query: 202 --AAQRFTSKSEK----------------PIFKIVMKQPNVRGKFA-MTIPKDFAEKHLP 261
                R+TS SE                 P+F  +MK  NV  + A + IPK +A  H P
Sbjct: 221 NYVLSRWTSLSEAQEEKVDMLVQDIQPEIPVFVAIMKHSNVNSRRACLVIPKRYASAHFP 280

Query: 262 DDFGIIKLQTP-NGRKW-PLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIK 286
            +   I LQ     +KW P+ Y R+      +Y    WK FV +N +KEGD+ +F L K
Sbjct: 281 LESQTITLQRQGKNKKWYPMFYIRKDGSGYMLY--GCWKNFVRDNHVKEGDMCIFHLTK 333

[Close]

BLAST of Cp4.1LG19g11550 vs. ExPASy Swiss-Prot
Match: Q9FJG2 (B3 domain-containing protein At5g18000 OS=Arabidopsis thaliana OX=3702 GN=At5g18000 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.1e-13
Identity = 73/290 (25.17%), Postives = 127/290 (43.79%), Query Frame = 0


Query: 5   SPQFFRIVLHNNLEDRKL-MIPKKFVKDHGELLST-SVRLKLPDGMEWKVGLTTAPNGVV 64
           +P FF+I+   +     + MIP   ++   +  S+  + L++P G  W+V ++  PN   
Sbjct: 17  NPAFFKILRREDHSTEMMRMIPHHLIRSISDKSSSFKMVLRVPWGRSWQVKISKNPNFHY 76

Query: 65  WLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVE------TEYCCIFNDSRA 124
               GW++F     L     L F  +    F  +IF+  G E      T       + R 
Sbjct: 77  MEDRGWNQFVNDNGLGENEYLTFTHEANMCFNVTIFEADGTEMLRPRKTITSSSGRNKRE 136

Query: 125 EFTMEYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVS 184
           E    Y+D  +  E   +      + P   +   +  ++  ++E  L  K   KTE   +
Sbjct: 137 ERKSIYKDVKKEEE---IESWSESSHPCHKTAESTSGRLTQKQELNLRKKEADKTEKSKT 196

Query: 185 SRRQQFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKL 244
           S++++       ++  TS S  P FK+ +K+ ++     + IPK F + H+P +  + K+
Sbjct: 197 SKKKKVETVSNDSEAGTS-SLIPEFKLTIKKSHL---LFLGIPKKFVDMHMPTETTMFKI 256

Query: 245 QTPNGRK-WPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIK 286
             P G+K W + Y     Q     FS GW R  +E  L  GD+  F+LIK
Sbjct: 257 HYPRGKKSWDVTYVVTDVQSR---FSGGWSRLAKELGLLVGDVCTFKLIK 296

[Close]

BLAST of Cp4.1LG19g11550 vs. ExPASy Swiss-Prot
Match: Q2QMT6 (B3 domain-containing protein LOC_Os12g40080 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0591400 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.6e-12
Identity = 77/289 (26.64%), Postives = 125/289 (43.25%), Query Frame = 0


Query: 24  IPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFGSLL 83
           IP KF ++ G  +S +V+L+  +G  ++V +    N +V L++GW +FA  Y LE G +L
Sbjct: 41  IPAKFARNFGGQMSGTVKLETRNGKTYEVQVAKELNNLV-LRSGWERFASAYELEKGDIL 100

Query: 84  VFKSDGFSTFQTSIFDPSGVETEYCCIFND------SRAEFTMEYEDSDENTESSPLRL- 143
           VF   G S F+  I+DPS  E    CI  +       R+     +     N +S+ L + 
Sbjct: 101 VFIYSGNSHFKVWIYDPSACEKGLPCIITEQLPRVQQRSISHNNHTQLKRNAKSAKLYVD 160

Query: 144 SKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTE--------AGVSSRRQQFVNKPEA 203
           S   +K +    P +    KP E        +P +E        A V    + F + P  
Sbjct: 161 SSGHSKETSEINPANSPSWKPTE-------RVPSSEELDEPVDLANVQKATKSFYSLPRM 220

Query: 204 AQRFTS------------KSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKL 263
               ++            K + P +  VM + +      + I KD+A  +L D    IKL
Sbjct: 221 CNMTSAQKAEVDALEKRIKPQIPFYITVMDKASATDGL-LAISKDYAVSYLLDKNETIKL 280

Query: 264 QTPNGRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIK 286
              +GR          + ++    S+GW  F+  N L+EGDI +F+  K
Sbjct: 281 -CHSGRSMTWDISLDIDTDDQYALSTGWLDFIRNNHLQEGDICVFEASK 319

[Close]

BLAST of Cp4.1LG19g11550 vs. NCBI nr
Match: XP_023517302.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 837 bits (2162), Expect = 2.42e-306
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0


Query: 1   MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60
           MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG
Sbjct: 1   MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60

Query: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM 120
           VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM
Sbjct: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM 120

Query: 121 EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQ 180
           EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQ
Sbjct: 121 EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQ 180

Query: 181 QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN 240
           QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN
Sbjct: 181 QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN 240

Query: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300
           GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF
Sbjct: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300

Query: 301 PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360
           PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY
Sbjct: 301 PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360

Query: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 412
           GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD
Sbjct: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 412

[Close]

BLAST of Cp4.1LG19g11550 vs. NCBI nr
Match: XP_023517303.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 830 bits (2145), Expect = 9.08e-304
Identity = 411/412 (99.76%), Postives = 411/412 (99.76%), Query Frame = 0


Query: 1   MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60
           MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG
Sbjct: 1   MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60

Query: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM 120
           VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM
Sbjct: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM 120

Query: 121 EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQ 180
           EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEE GCLIIKNMPKTEAGVSSRRQ
Sbjct: 121 EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEE-GCLIIKNMPKTEAGVSSRRQ 180

Query: 181 QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN 240
           QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN
Sbjct: 181 QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN 240

Query: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300
           GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF
Sbjct: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300

Query: 301 PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360
           PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY
Sbjct: 301 PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360

Query: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 412
           GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD
Sbjct: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 411

[Close]

BLAST of Cp4.1LG19g11550 vs. NCBI nr
Match: XP_022962673.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 807 bits (2085), Expect = 1.32e-294
Identity = 401/412 (97.33%), Postives = 402/412 (97.57%), Query Frame = 0


Query: 1   MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60
           MA SSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG
Sbjct: 1   MAASSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60

Query: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM 120
           VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCI NDSRAEFTM
Sbjct: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTM 120

Query: 121 EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQ 180
           E EDSDENTESS  RLSKRKNKPSVPSPPQSRKKMK EEEGCLI+KNMPKTEAGVSSRRQ
Sbjct: 121 EDEDSDENTESSSQRLSKRKNKPSVPSPPQSRKKMKAEEEGCLIMKNMPKTEAGVSSRRQ 180

Query: 181 QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN 240
           QFVNK EAAQRFTSKSEKP FKIVMKQPNVRGKFAM IPKDFAEKHLPDDFGIIKLQTPN
Sbjct: 181 QFVNKLEAAQRFTSKSEKPSFKIVMKQPNVRGKFAMIIPKDFAEKHLPDDFGIIKLQTPN 240

Query: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300
           GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF
Sbjct: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300

Query: 301 PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360
           PSPAT TRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY
Sbjct: 301 PSPATKTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360

Query: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 412
           GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD
Sbjct: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 412

[Close]

BLAST of Cp4.1LG19g11550 vs. NCBI nr
Match: XP_022962674.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 801 bits (2069), Expect = 3.49e-292
Identity = 400/412 (97.09%), Postives = 401/412 (97.33%), Query Frame = 0


Query: 1   MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60
           MA SSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG
Sbjct: 1   MAASSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60

Query: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM 120
           VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCI NDSRAEFTM
Sbjct: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTM 120

Query: 121 EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQ 180
           E EDSDENTESS  RLSKRKNKPSVPSPPQSRKKMK  EEGCLI+KNMPKTEAGVSSRRQ
Sbjct: 121 EDEDSDENTESSSQRLSKRKNKPSVPSPPQSRKKMK-AEEGCLIMKNMPKTEAGVSSRRQ 180

Query: 181 QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN 240
           QFVNK EAAQRFTSKSEKP FKIVMKQPNVRGKFAM IPKDFAEKHLPDDFGIIKLQTPN
Sbjct: 181 QFVNKLEAAQRFTSKSEKPSFKIVMKQPNVRGKFAMIIPKDFAEKHLPDDFGIIKLQTPN 240

Query: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300
           GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF
Sbjct: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300

Query: 301 PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360
           PSPAT TRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY
Sbjct: 301 PSPATKTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360

Query: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 412
           GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD
Sbjct: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 411

[Close]

BLAST of Cp4.1LG19g11550 vs. NCBI nr
Match: XP_023517306.1 (B3 domain-containing transcription factor VRN1-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 798 bits (2062), Expect = 2.49e-291
Identity = 398/412 (96.60%), Postives = 398/412 (96.60%), Query Frame = 0


Query: 1   MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60
           MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG
Sbjct: 1   MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60

Query: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM 120
           VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM
Sbjct: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM 120

Query: 121 EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQ 180
           EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEE              GVSSRRQ
Sbjct: 121 EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEE--------------GVSSRRQ 180

Query: 181 QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN 240
           QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN
Sbjct: 181 QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN 240

Query: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300
           GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF
Sbjct: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300

Query: 301 PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360
           PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY
Sbjct: 301 PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360

Query: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 412
           GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD
Sbjct: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 398

[Close]

BLAST of Cp4.1LG19g11550 vs. ExPASy TrEMBL
Match: A0A6J1HFG5 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463094 PE=4 SV=1)

HSP 1 Score: 807 bits (2085), Expect = 6.39e-295
Identity = 401/412 (97.33%), Postives = 402/412 (97.57%), Query Frame = 0


Query: 1   MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60
           MA SSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG
Sbjct: 1   MAASSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60

Query: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM 120
           VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCI NDSRAEFTM
Sbjct: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTM 120

Query: 121 EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQ 180
           E EDSDENTESS  RLSKRKNKPSVPSPPQSRKKMK EEEGCLI+KNMPKTEAGVSSRRQ
Sbjct: 121 EDEDSDENTESSSQRLSKRKNKPSVPSPPQSRKKMKAEEEGCLIMKNMPKTEAGVSSRRQ 180

Query: 181 QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN 240
           QFVNK EAAQRFTSKSEKP FKIVMKQPNVRGKFAM IPKDFAEKHLPDDFGIIKLQTPN
Sbjct: 181 QFVNKLEAAQRFTSKSEKPSFKIVMKQPNVRGKFAMIIPKDFAEKHLPDDFGIIKLQTPN 240

Query: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300
           GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF
Sbjct: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300

Query: 301 PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360
           PSPAT TRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY
Sbjct: 301 PSPATKTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360

Query: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 412
           GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD
Sbjct: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 412

[Close]

BLAST of Cp4.1LG19g11550 vs. ExPASy TrEMBL
Match: A0A6J1HHR8 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463094 PE=4 SV=1)

HSP 1 Score: 801 bits (2069), Expect = 1.69e-292
Identity = 400/412 (97.09%), Postives = 401/412 (97.33%), Query Frame = 0


Query: 1   MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60
           MA SSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG
Sbjct: 1   MAASSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60

Query: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM 120
           VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCI NDSRAEFTM
Sbjct: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTM 120

Query: 121 EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQ 180
           E EDSDENTESS  RLSKRKNKPSVPSPPQSRKKMK  EEGCLI+KNMPKTEAGVSSRRQ
Sbjct: 121 EDEDSDENTESSSQRLSKRKNKPSVPSPPQSRKKMK-AEEGCLIMKNMPKTEAGVSSRRQ 180

Query: 181 QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN 240
           QFVNK EAAQRFTSKSEKP FKIVMKQPNVRGKFAM IPKDFAEKHLPDDFGIIKLQTPN
Sbjct: 181 QFVNKLEAAQRFTSKSEKPSFKIVMKQPNVRGKFAMIIPKDFAEKHLPDDFGIIKLQTPN 240

Query: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300
           GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF
Sbjct: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300

Query: 301 PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360
           PSPAT TRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY
Sbjct: 301 PSPATKTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360

Query: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 412
           GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD
Sbjct: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 411

[Close]

BLAST of Cp4.1LG19g11550 vs. ExPASy TrEMBL
Match: A0A6J1KQQ1 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496775 PE=4 SV=1)

HSP 1 Score: 788 bits (2035), Expect = 2.67e-287
Identity = 389/412 (94.42%), Postives = 397/412 (96.36%), Query Frame = 0


Query: 1   MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60
           MA SSPQFFRIVLHNNLEDRKLMIPKKFVKD+GELLSTSVRLKLPDGMEWKVGLTTAPNG
Sbjct: 1   MAASSPQFFRIVLHNNLEDRKLMIPKKFVKDYGELLSTSVRLKLPDGMEWKVGLTTAPNG 60

Query: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM 120
           VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCI +DSRAEFTM
Sbjct: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCILHDSRAEFTM 120

Query: 121 EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQ 180
           E EDSDENTESSP RLSKRKN  SVPSPPQSRKKMKPEEEGCLI+KNMPKTEAGVSSRRQ
Sbjct: 121 EDEDSDENTESSPQRLSKRKNNASVPSPPQSRKKMKPEEEGCLIMKNMPKTEAGVSSRRQ 180

Query: 181 QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN 240
           QFVNKPEAAQR TSKS+KP FKIVMKQPNVRGKFAM IPKDFAEKHLPDDFGIIKL+TPN
Sbjct: 181 QFVNKPEAAQRLTSKSDKPSFKIVMKQPNVRGKFAMIIPKDFAEKHLPDDFGIIKLRTPN 240

Query: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300
           GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGD+GLFQLIKKDIFSFTKLQDT PF
Sbjct: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDVGLFQLIKKDIFSFTKLQDTPPF 300

Query: 301 PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360
            SP T TRNPCF+ANILNRRHKKFVLNIPMVFAK HFS+DM SAKLQVGNRQWIVALRQY
Sbjct: 301 ASPPTKTRNPCFKANILNRRHKKFVLNIPMVFAKAHFSTDMLSAKLQVGNRQWIVALRQY 360

Query: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 412
           GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD
Sbjct: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 412

[Close]

BLAST of Cp4.1LG19g11550 vs. ExPASy TrEMBL
Match: A0A6J1KN14 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496775 PE=4 SV=1)

HSP 1 Score: 781 bits (2018), Expect = 1.00e-284
Identity = 388/412 (94.17%), Postives = 396/412 (96.12%), Query Frame = 0


Query: 1   MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60
           MA SSPQFFRIVLHNNLEDRKLMIPKKFVKD+GELLSTSVRLKLPDGMEWKVGLTTAPNG
Sbjct: 1   MAASSPQFFRIVLHNNLEDRKLMIPKKFVKDYGELLSTSVRLKLPDGMEWKVGLTTAPNG 60

Query: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM 120
           VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCI +DSRAEFTM
Sbjct: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCILHDSRAEFTM 120

Query: 121 EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQ 180
           E EDSDENTESSP RLSKRKN  SVPSPPQSRKKMKPEE GCLI+KNMPKTEAGVSSRRQ
Sbjct: 121 EDEDSDENTESSPQRLSKRKNNASVPSPPQSRKKMKPEE-GCLIMKNMPKTEAGVSSRRQ 180

Query: 181 QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN 240
           QFVNKPEAAQR TSKS+KP FKIVMKQPNVRGKFAM IPKDFAEKHLPDDFGIIKL+TPN
Sbjct: 181 QFVNKPEAAQRLTSKSDKPSFKIVMKQPNVRGKFAMIIPKDFAEKHLPDDFGIIKLRTPN 240

Query: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300
           GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGD+GLFQLIKKDIFSFTKLQDT PF
Sbjct: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDVGLFQLIKKDIFSFTKLQDTPPF 300

Query: 301 PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360
            SP T TRNPCF+ANILNRRHKKFVLNIPMVFAK HFS+DM SAKLQVGNRQWIVALRQY
Sbjct: 301 ASPPTKTRNPCFKANILNRRHKKFVLNIPMVFAKAHFSTDMLSAKLQVGNRQWIVALRQY 360

Query: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 412
           GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD
Sbjct: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 411

[Close]

BLAST of Cp4.1LG19g11550 vs. ExPASy TrEMBL
Match: A0A6J1HFS2 (B3 domain-containing transcription factor VRN1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111463094 PE=4 SV=1)

HSP 1 Score: 770 bits (1988), Expect = 2.29e-280
Identity = 388/412 (94.17%), Postives = 388/412 (94.17%), Query Frame = 0


Query: 1   MAPSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60
           MA SSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG
Sbjct: 1   MAASSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNG 60

Query: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM 120
           VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCI NDSRAEFTM
Sbjct: 61  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCILNDSRAEFTM 120

Query: 121 EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQ 180
           E EDSDENTESS  RLSKRKNKPSVPSPPQSRKKMK EE              GVSSRRQ
Sbjct: 121 EDEDSDENTESSSQRLSKRKNKPSVPSPPQSRKKMKAEE--------------GVSSRRQ 180

Query: 181 QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPN 240
           QFVNK EAAQRFTSKSEKP FKIVMKQPNVRGKFAM IPKDFAEKHLPDDFGIIKLQTPN
Sbjct: 181 QFVNKLEAAQRFTSKSEKPSFKIVMKQPNVRGKFAMIIPKDFAEKHLPDDFGIIKLQTPN 240

Query: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300
           GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF
Sbjct: 241 GRKWPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDTSPF 300

Query: 301 PSPATNTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360
           PSPAT TRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY
Sbjct: 301 PSPATKTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQY 360

Query: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 412
           GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD
Sbjct: 361 GSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKHVSSSASMD 398

[Close]

BLAST of Cp4.1LG19g11550 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 117.9 bits (294), Expect = 2.0e-26
Identity = 93/330 (28.18%), Postives = 149/330 (45.15%), Query Frame = 0


Query: 6   PQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQ 65
           P F +++  + +++++L +P KFV    + LS +V L +PDG  W+VGL  A N  +W Q
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADN-KIWFQ 63

Query: 66  NGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCI---------FNDSRA 125
           +GW +F + YS+  G LL+F+ +G S F   IF+ S  E  Y            F  +R 
Sbjct: 64  DGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARL 123

Query: 126 EFTMEYEDSD----ENTESSPLRLS---------------------KRKNKPSVPSPPQS 185
              +E ED++     +   SPL  S                     K +     P  P+ 
Sbjct: 124 FEDLEDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKK 183

Query: 186 RKKMKPEEEGCLIIKNMPKTEAGVSSRRQQFVNKPEAAQRFTSKSEK------------- 245
           R + K   +   I  + P+ +      R +F     A +R  +  E+             
Sbjct: 184 RGRKKKNADPEEINSSAPRDDD--PENRSKFYESASARKRTVTAEERERAINAAKTFEPT 243

Query: 246 -PIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPNGRKWPL--LYKRRRNQE 286
            P F++V++   +     M +P  FAEK+L    G IK+Q    ++WP+  LYK  R + 
Sbjct: 244 NPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAE-KQWPVRCLYKAGRAK- 303

[Close]

BLAST of Cp4.1LG19g11550 vs. TAIR 10
Match: AT5G18000.1 (VERDANDI )

HSP 1 Score: 79.3 bits (194), Expect = 7.8e-15
Identity = 73/290 (25.17%), Postives = 127/290 (43.79%), Query Frame = 0


Query: 5   SPQFFRIVLHNNLEDRKL-MIPKKFVKDHGELLST-SVRLKLPDGMEWKVGLTTAPNGVV 64
           +P FF+I+   +     + MIP   ++   +  S+  + L++P G  W+V ++  PN   
Sbjct: 17  NPAFFKILRREDHSTEMMRMIPHHLIRSISDKSSSFKMVLRVPWGRSWQVKISKNPNFHY 76

Query: 65  WLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVE------TEYCCIFNDSRA 124
               GW++F     L     L F  +    F  +IF+  G E      T       + R 
Sbjct: 77  MEDRGWNQFVNDNGLGENEYLTFTHEANMCFNVTIFEADGTEMLRPRKTITSSSGRNKRE 136

Query: 125 EFTMEYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVS 184
           E    Y+D  +  E   +      + P   +   +  ++  ++E  L  K   KTE   +
Sbjct: 137 ERKSIYKDVKKEEE---IESWSESSHPCHKTAESTSGRLTQKQELNLRKKEADKTEKSKT 196

Query: 185 SRRQQFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKL 244
           S++++       ++  TS S  P FK+ +K+ ++     + IPK F + H+P +  + K+
Sbjct: 197 SKKKKVETVSNDSEAGTS-SLIPEFKLTIKKSHL---LFLGIPKKFVDMHMPTETTMFKI 256

Query: 245 QTPNGRK-WPLLYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIK 286
             P G+K W + Y     Q     FS GW R  +E  L  GD+  F+LIK
Sbjct: 257 HYPRGKKSWDVTYVVTDVQSR---FSGGWSRLAKELGLLVGDVCTFKLIK 296

[Close]

BLAST of Cp4.1LG19g11550 vs. TAIR 10
Match: AT1G26680.1 (transcriptional factor B3 family protein )

HSP 1 Score: 74.3 bits (181), Expect = 2.5e-13
Identity = 94/402 (23.38%), Postives = 161/402 (40.05%), Query Frame = 0


Query: 2   APSSPQFFRIVLHNNLEDRKLMIPKKFVKDHGELLSTSVR-LKLPDGMEWKVGLTTAPNG 61
           +P +P FF+ +L  +     L IP  F   H E  +   + + L      K  L      
Sbjct: 9   SPINPHFFQPILTES--RTHLNIPVAFFSKHVEGRNNQNKTVTLRSDASDKTWLVKMDG- 68

Query: 62  VVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTFQTSIFDPSGVETEYCCIFNDSRAEFTM 121
            + L +GW  FA  + L  G ++VF+ +G   F  +   PS  E +Y             
Sbjct: 69  -LKLTDGWEDFAFAHDLRTGDIVVFRLEGEMVFHVTALGPSCCEIQY------------- 128

Query: 122 EYEDSDENTESSPLRLSKRKNKPSVPSPPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQ 181
                  +T S  +    R ++ ++ S   SR K  P +          K E+ +   R 
Sbjct: 129 -------HTSSHNINDDDRNDQINIASRNSSRVKKNPRK----------KVESSLDHSR- 188

Query: 182 QFVNKPEAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGI--IKLQT 241
            FV K  A   +   +++                 + IP  FA  +  +      I LQ 
Sbjct: 189 -FVAKVSA---WCLSNDR-----------------LYIPLSFARLNGLNKINSKKIYLQN 248

Query: 242 PNGRKWPLLYKR-RRNQENFVYFSSGWKRFVEENVLKEGDIGLFQLIKKDIFSFTKLQDT 301
             GR W L+ +  +   + FV   SGW+RF  EN +++G    F+L++K      +L   
Sbjct: 249 EEGRSWKLVLRHDKSGMQTFV--QSGWRRFCSENGIRQGQY-TFKLVRKSAPPVIRLCRA 308

Query: 302 SPFPSPAT----NTRNPCFEANILNRRHKKFVLNIPMVFAKEHFSSDMRSAKLQVGNRQ- 361
              P   +    ++ + CFE ++     +  +L +P  F   +   D R +++ + N Q 
Sbjct: 309 KAKPKQRSVAEYSSDHSCFEGSVTPSSLRNDLLYLPRSFVNSN-RLDKRCSEIVLKNEQG 350

Query: 362 --WIVALRQYGSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDT 393
             W + L+++ S   L  GW  F   N ++ GDS  F++V T
Sbjct: 369 VKWPLVLKRFKSVTYLPKGWTSFCQVNRIKAGDSFKFKLVGT 350

[Close]

BLAST of Cp4.1LG19g11550 vs. TAIR 10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 73.2 bits (178), Expect = 5.6e-13
Identity = 74/276 (26.81%), Postives = 121/276 (43.84%), Query Frame = 0


Query: 21  KLMIPKKFVKDHGELLSTSVRLKLPDGMEWKVGLTTAPNGVVWLQNGWHKFAEHYSLEFG 80
           +L+IP+KF       L   V LK P G+ + VG+       +  + GW KF + +SLE  
Sbjct: 36  RLVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEEN 95

Query: 81  SLLVFKSDGFSTFQTSIFD-------PSGVETEYCCIFNDSRAEFT----MEYEDSDENT 140
            LLVFK  G S F+  +FD       P+      C     ++A  T     E+ +SD +T
Sbjct: 96  DLLVFKFHGVSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKASHTGYEQEEHINSDIDT 155

Query: 141 ESSPLRLSKRKNKPSVPS---PPQSRKKMKPEEEGCLIIKNMPKTEAGVSSRRQQFVNKP 200
            S+ L +    +   V     P    KKM+ E     + +          S ++      
Sbjct: 156 ASAQLPVISPTSTVRVSEGKYPLSGFKKMRRELSNDNLDQKADVEMISAGSNKKAL---- 215

Query: 201 EAAQRFTSKSEKPIFKIVMKQPNVRGKFAMTIPKDFAEKHLPDDFGIIKLQTPNGRKWPL 260
             A+R  S      F + MK+ +V  K  +TIP  +  K++      + +Q  +  KW +
Sbjct: 216 SLAKRAISPDG---FLVFMKRSHVVSKCFLTIPYKWCVKNMLITRQEVVMQV-DQTKWEM 275

Query: 261 LYKRRRNQENFVYFSSGWKRFVEENVLKEGDIGLFQ 283
            +            S+GWK+FV++N L+EGD+ +F+
Sbjct: 276 KF-NIFGARGSGGISTGWKKFVQDNNLREGDVCVFE 302

[Close]

BLAST of Cp4.1LG19g11550 vs. TAIR 10
Match: AT1G49480.1 (related to vernalization1 1 )

HSP 1 Score: 58.5 bits (140), Expect = 1.4e-08
Identity = 26/79 (32.91%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 325 VLNIPMVFAKEHFSSDMRSAKLQVGNRQWIVALRQYGSSVRLSAGWCLFYGDNGLEDGDS 384
           ++ +P  FA+++ S      KLQ+G +QW V         + S GW  F  +N + +GD 
Sbjct: 143 IMYLPSGFAEKYLSGISGFIKLQLGEKQWPVRCLYKAGRAKFSQGWYEFTLENNIGEGDV 202

Query: 385 CLFEMVDTKNCVFKVTIFK 404
           C+FE++ T++ V +VT F+
Sbjct: 203 CVFELLRTRDFVLEVTAFR 221

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g11550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3W1	2.8e-25	28.18	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q851V5	1.1e-16	26.80	Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japoni...	[more]
Q851W5	2.2e-14	27.76	B3 domain-containing protein Os03g0620400 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q9FJG2	1.1e-13	25.17	B3 domain-containing protein At5g18000 OS=Arabidopsis thaliana OX=3702 GN=At5g18...	[more]
Q2QMT6	1.6e-12	26.64	B3 domain-containing protein LOC_Os12g40080 OS=Oryza sativa subsp. japonica OX=3...	[more]

BLAST of Cp4.1LG19g11550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023517302.1	2.42e-306	100.00	B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita pepo s...	[more]
XP_023517303.1	9.08e-304	99.76	B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita pepo s...	[more]
XP_022962673.1	1.32e-294	97.33	B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita moscha...	[more]
XP_022962674.1	3.49e-292	97.09	B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita moscha...	[more]
XP_023517306.1	2.49e-291	96.60	B3 domain-containing transcription factor VRN1-like isoform X3 [Cucurbita pepo s...	[more]

BLAST of Cp4.1LG19g11550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFG5	6.39e-295	97.33	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita mosc...	[more]
A0A6J1HHR8	1.69e-292	97.09	B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita mosc...	[more]
A0A6J1KQQ1	2.67e-287	94.42	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1KN14	1.00e-284	94.17	B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita maxi...	[more]
A0A6J1HFS2	2.29e-280	94.17	B3 domain-containing transcription factor VRN1-like isoform X3 OS=Cucurbita mosc...	[more]

BLAST of Cp4.1LG19g11550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18990.1	2.0e-26	28.18	AP2/B3-like transcriptional factor family protein	[more]
AT5G18000.1	7.8e-15	25.17	VERDANDI	[more]
AT1G26680.1	2.5e-13	23.38	transcriptional factor B3 family protein	[more]
AT4G33280.1	5.6e-13	26.81	AP2/B3-like transcriptional factor family protein	[more]
AT1G49480.1	1.4e-08	32.91	related to vernalization1 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 312..405 e-value: 1.9E-5 score: 34.1 coord: 201..297 e-value: 2.1E-19 score: 80.5 coord: 8..101 e-value: 6.7E-15 score: 65.5
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 321..403 e-value: 2.0E-10 score: 40.4 coord: 201..287 e-value: 4.1E-18 score: 65.1 coord: 14..98 e-value: 1.8E-12 score: 47.0
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 201..297 score: 14.903114
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 311..405 score: 11.532856
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 7..101 score: 13.041717
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 6..99 e-value: 6.24377E-15 score: 68.1233
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 199..287 e-value: 1.62489E-22 score: 89.3092
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 302..406 e-value: 3.5E-24 score: 86.9 coord: 179..294 e-value: 3.5E-26 score: 93.3
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 2..103 e-value: 6.2E-22 score: 79.4
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 306..403
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 196..293
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 3..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..137
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 306..403 coord: 3..288
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 306..403 coord: 3..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g11550.1	Cp4.1LG19g11550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding