Cp4.1LG19g08850 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG19g08850
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description60S ribosomal protein L8
LocationCp4.1LG19: 6284595 .. 6286280 (-)
RNA-Seq ExpressionCp4.1LG19g08850
SyntenyCp4.1LG19g08850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGAGTTATTCGTGCTCAGCGTAAGGGAGCGGGATCCGTCTTCAAGTCCCACACCCATCACCGGAAGGGTCCGGCCAGGTTCAGAAGTCTTGACTTCGGCGAACGGAATGGCTATCTGAAAGGAGTCGTCTCTGAGATTATTCACGATCCTGGCCGTGGAGCACCGCTTGCTCGAGTTACCTTCCGCCATCCTTTCAGGTACAAGAAACAGAATGAACTGTTCGTTGCGGCTGAGGGTATGTACACTGGCCAATTTGTTTACTGCGGGAAGAAGGCAAATCTCATGGTCGGAAATGTCTTGCCCCTTAGATCGATTCCTGAAGGTGCCGTCGTTTGTAACGTCGAACACCATGTCGGCGACCGCGGTGTTTTCGCTAGATGTTCCGGAGATTACGCGATTGTTATCAGCCATAATCCCGATAACGACACTTCCAGGTTTTTCTTCAATACTTGTTCTTGAAAGAGTGTTGTTACTAGTAAATTCTGTACTTGGATGATCAAAATTTGTTTACCTTTCACGTTTTGGAGTGGTGTGCTCTGGAGATGATGTGTCTGAGAGGAGGTATGGGGGAGCGATGGTAATAAAGGTTTAGTGTTAGAAATATACAGCGGACTGAAATAAGAATCTTTTGGTCGCCCCTCTTGCCTTAATTTTATTCGTCCTAGCAATGATATTCCAAGCATCAGGCACTTACCAGATACATGGGCAATGGTGGGCCAACAACATGCCTTACCTCTCGCCATAATTGGCTAAGTGCTTGATTGCACCTTAGAATGCTGGTTGGGAACTGCCTCAGGCTTCTCCGTATGCGGTCGTTGGAATTTCACAGATTAGGATTTGTGTGCGTAAATTATTTGCAATGAACAGATAACTGCACATTCCTCGGATGTGGCAGTTGATTGCAGCTATTTCATATGCAAATGAAGTCTTATGTTCATTTTTAATTACTACCAGGATCAAGCTTCCATCAGGTTCAAAGAAAGTAGTTCCAAGTGGGTGTCGTGCCATGGTCGGTCAGGTTGCAGGTGGTGGTAGAACTGAGAAGCCCCTTCTTAAGGCTGGTAATGCTTACCACAAATTTAGAGTGAAGAGAAACTGCTGGCCTAAGGTCCGTGGTGTTGCAATGAATCCCGTCGAGCATCCTCACGGAGGAGGTAACCATCAACACATCGGACACGCCAGCACTGTCAGGCGGGATGCACCTCCTGGTCAAAAGGTTGGTCTCATTGCTGCAAGGAGAACTGGTAGACTCAGAGGACAAGCAGCAGCCACTGCTTCTAAAGCTGATAAGGCTTAAACAGTATTATAATTTAGATTACGACTTGGTTGCTGAGGTCATTTCATTTTACTTCCATCGTTCTATTTGTGTACTCTCCTCCTCCATTGTAACTTTTGAGAAAACATTTTTTTGTTCCGTTGTTTTCCCCTCCTAAACATCTGCCCTTCTACTATTTGTTGGCTTCATTACGTTATATATTATCAGAAGGATTTATTCCGGGCCGTTGTCCATTAAAATCTGAGAAGGATTGTTCTGGGCTTTTCACCCATTGAGCCCATCATCAAAGGGATTTATTCTGGGCCTCTCTATTCAACCTTACAAGGATTGTTTTGGGCCTTTTCCTCTTTAAGCCCATCCTAGTTAAATTAAATTAAATTAAATGAATATTTCCATTTTACTCG

mRNA sequence

ATGGGAAGAGTTATTCGTGCTCAGCGTAAGGGAGCGGGATCCGTCTTCAAGTCCCACACCCATCACCGGAAGGGTCCGGCCAGGTTCAGAAGTCTTGACTTCGGCGAACGGAATGGCTATCTGAAAGGAGTCGTCTCTGAGATTATTCACGATCCTGGCCGTGGAGCACCGCTTGCTCGAGTTACCTTCCGCCATCCTTTCAGGTACAAGAAACAGAATGAACTGTTCGTTGCGGCTGAGGGTATGTACACTGGCCAATTTGTTTACTGCGGGAAGAAGGCAAATCTCATGGTCGGAAATGTCTTGCCCCTTAGATCGATTCCTGAAGGTGCCGTCGTTTGTAACGTCGAACACCATGTCGGCGACCGCGGTGTTTTCGCTAGATGTTCCGGAGATTACGCGATTGTTATCAGCCATAATCCCGATAACGACACTTCCAGGATCAAGCTTCCATCAGGTTCAAAGAAAGTAGTTCCAAGTGGGTGTCGTGCCATGGTCGGTCAGGTTGCAGGTGGTGGTAGAACTGAGAAGCCCCTTCTTAAGGCTGGTAATGCTTACCACAAATTTAGAGTGAAGAGAAACTGCTGGCCTAAGGTCCGTGGTGTTGCAATGAATCCCGTCGAGCATCCTCACGGAGGAGGTAACCATCAACACATCGGACACGCCAGCACTGTCAGGCGGGATGCACCTCCTGGTCAAAAGGTTGGTCTCATTGCTGCAAGGAGAACTGGTAGACTCAGAGGACAAGCAGCAGCCACTGCTTCTAAAGCTGATAAGGCTTAAACAGTATTATAATTTAGATTACGACTTGGTTGCTGAGGTCATTTCATTTTACTTCCATCGTTCTATTTGTGTACTCTCCTCCTCCATTGTAACTTTTGAGAAAACATTTTTTTGTTCCGTTGTTTTCCCCTCCTAAACATCTGCCCTTCTACTATTTGTTGGCTTCATTACGTTATATATTATCAGAAGGATTTATTCCGGGCCGTTGTCCATTAAAATCTGAGAAGGATTGTTCTGGGCTTTTCACCCATTGAGCCCATCATCAAAGGGATTTATTCTGGGCCTCTCTATTCAACCTTACAAGGATTGTTTTGGGCCTTTTCCTCTTTAAGCCCATCCTAGTTAAATTAAATTAAATTAAATGAATATTTCCATTTTACTCG

Coding sequence (CDS)

ATGGGAAGAGTTATTCGTGCTCAGCGTAAGGGAGCGGGATCCGTCTTCAAGTCCCACACCCATCACCGGAAGGGTCCGGCCAGGTTCAGAAGTCTTGACTTCGGCGAACGGAATGGCTATCTGAAAGGAGTCGTCTCTGAGATTATTCACGATCCTGGCCGTGGAGCACCGCTTGCTCGAGTTACCTTCCGCCATCCTTTCAGGTACAAGAAACAGAATGAACTGTTCGTTGCGGCTGAGGGTATGTACACTGGCCAATTTGTTTACTGCGGGAAGAAGGCAAATCTCATGGTCGGAAATGTCTTGCCCCTTAGATCGATTCCTGAAGGTGCCGTCGTTTGTAACGTCGAACACCATGTCGGCGACCGCGGTGTTTTCGCTAGATGTTCCGGAGATTACGCGATTGTTATCAGCCATAATCCCGATAACGACACTTCCAGGATCAAGCTTCCATCAGGTTCAAAGAAAGTAGTTCCAAGTGGGTGTCGTGCCATGGTCGGTCAGGTTGCAGGTGGTGGTAGAACTGAGAAGCCCCTTCTTAAGGCTGGTAATGCTTACCACAAATTTAGAGTGAAGAGAAACTGCTGGCCTAAGGTCCGTGGTGTTGCAATGAATCCCGTCGAGCATCCTCACGGAGGAGGTAACCATCAACACATCGGACACGCCAGCACTGTCAGGCGGGATGCACCTCCTGGTCAAAAGGTTGGTCTCATTGCTGCAAGGAGAACTGGTAGACTCAGAGGACAAGCAGCAGCCACTGCTTCTAAAGCTGATAAGGCTTAA

Protein sequence

MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAARRTGRLRGQAAATASKADKA
Homology
[Close]
BLAST of Cp4.1LG19g08850 vs. ExPASy Swiss-Prot
Match: P29766 (60S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 511.5 bits (1316), Expect = 5.5e-144
Identity = 242/260 (93.08%), Postives = 254/260 (97.69%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFR+LDFGERNGYLKGV++E+IHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFRYK Q ELFVAAEGMYTGQFVYCGKKA LMVGNVLPLRSIPEGAVVCNVEH V
Sbjct: 61  VTFRHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDN T+R+KLPSG+KK+VPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 261
           RRTGRLRGQA ATA+KADKA
Sbjct: 241 RRTGRLRGQARATAAKADKA 260

[Close]
BLAST of Cp4.1LG19g08850 vs. ExPASy Swiss-Prot
Match: Q42064 (60S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2)

HSP 1 Score: 508.8 bits (1309), Expect = 3.5e-143
Identity = 241/258 (93.41%), Postives = 253/258 (98.06%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           V FRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA L+VGNVLPLRSIPEGAV+CNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSGSKK+VPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKAD 259
           RRTGRLRGQAAA ASKAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258

[Close]
BLAST of Cp4.1LG19g08850 vs. ExPASy Swiss-Prot
Match: P46286 (60S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2)

HSP 1 Score: 503.1 bits (1294), Expect = 1.9e-141
Identity = 239/258 (92.64%), Postives = 253/258 (98.06%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA L+VGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGV AR SGDYAIVI+HNPD+DT+RIKLPSGSKK+VPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKAD 259
           RRTGRLRGQAAA+A+KAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258

[Close]
BLAST of Cp4.1LG19g08850 vs. ExPASy Swiss-Prot
Match: P25998 (60S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 4.3e-141
Identity = 239/260 (91.92%), Postives = 250/260 (96.15%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGR+IRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGV++E+IHDPGRGAPLAR
Sbjct: 1   MGRLIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEVIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFR+PFRY  Q ELFVAAEGMYTGQFVYCGKKA LMVGNVLPLRSIPEGAVVCNVEH V
Sbjct: 61  VTFRYPFRYNHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSG YAIVISHNPDN T+RIKLPSGSKK+VPSGCR M+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARCSGAYAIVISHNPDNGTTRIKLPSGSKKIVPSGCRRMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV RDAPPGQKVGLIA 
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVARDAPPGQKVGLIAG 240

Query: 241 RRTGRLRGQAAATASKADKA 261
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]
BLAST of Cp4.1LG19g08850 vs. ExPASy Swiss-Prot
Match: Q4PSL7 (60S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3)

HSP 1 Score: 459.5 bits (1181), Expect = 2.5e-128
Identity = 219/259 (84.56%), Postives = 238/259 (91.89%), Query Frame = 0 

Query: 1   MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLA 60
           MGRVIRAQRKG AGSVFKSHTHHRKGPA+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 61  RVTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHH 120
           RV FRHPFRY KQ ELFVAAEGMYTGQ++YCGKKANLMVGNVLPL SIPEGAV+CNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 121 VGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPL 180
           VGDRG  AR SGDYAIVI+HNP+++T+R+KLPSGSKK++PS CRAM+GQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180

Query: 181 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 240
           LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240

Query: 241 ARRTGRLRGQAAATASKAD 259
           ARRTGR RG AA  A+KAD
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259

[Close]
BLAST of Cp4.1LG19g08850 vs. NCBI nr
Match: XP_023003927.1 (60S ribosomal protein L8-3 [Cucurbita maxima] >XP_023518952.1 60S ribosomal protein L8-3 [Cucurbita pepo subsp. pepo] >KAG6594783.1 60S ribosomal protein L8, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026748.1 60S ribosomal protein L8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 533 bits (1374), Expect = 2.30e-191
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 260
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]
BLAST of Cp4.1LG19g08850 vs. NCBI nr
Match: XP_022963335.1 (60S ribosomal protein L8-3 [Cucurbita moschata])

HSP 1 Score: 532 bits (1371), Expect = 6.60e-191
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLR+IPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 260
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]
BLAST of Cp4.1LG19g08850 vs. NCBI nr
Match: XP_022133211.1 (60S ribosomal protein L8 [Momordica charantia])

HSP 1 Score: 530 bits (1366), Expect = 3.82e-190
Identity = 256/260 (98.46%), Postives = 260/260 (100.00%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGV++EI+HDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIVHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 260
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]
BLAST of Cp4.1LG19g08850 vs. NCBI nr
Match: XP_023873292.1 (60S ribosomal protein L8-3 [Quercus suber] >XP_023874783.1 60S ribosomal protein L8-3 [Quercus suber] >XP_023874791.1 60S ribosomal protein L8-3 [Quercus suber] >XP_030944521.1 60S ribosomal protein L8-3 [Quercus lobata] >KAF3957341.1 hypothetical protein CMV_017639 [Castanea mollissima] >KAF3963308.1 hypothetical protein CMV_012282 [Castanea mollissima] >KAF3963310.1 hypothetical protein CMV_012284 [Castanea mollissima])

HSP 1 Score: 526 bits (1354), Expect = 2.58e-188
Identity = 252/260 (96.92%), Postives = 259/260 (99.62%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           +TFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKA L+VGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  ITFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSR+KLPSG+KK+VPSGCRAM+GQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 260
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]
BLAST of Cp4.1LG19g08850 vs. NCBI nr
Match: XP_030923722.1 (60S ribosomal protein L8-3-like [Quercus lobata])

HSP 1 Score: 526 bits (1354), Expect = 2.68e-188
Identity = 252/259 (97.30%), Postives = 258/259 (99.61%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           +TFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKA L+VGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  ITFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSR+KLPSG+KK+VPSGCRAM+GQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADK 259
           RRTGRLRGQAAATASKADK
Sbjct: 241 RRTGRLRGQAAATASKADK 259

[Close]
BLAST of Cp4.1LG19g08850 vs. ExPASy TrEMBL
Match: A0A6J1KNZ2 (60S ribosomal protein L8-3 OS=Cucurbita maxima OX=3661 GN=LOC111497370 PE=3 SV=1)

HSP 1 Score: 533 bits (1374), Expect = 1.11e-191
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 260
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]
BLAST of Cp4.1LG19g08850 vs. ExPASy TrEMBL
Match: A0A6J1HHP9 (60S ribosomal protein L8-3 OS=Cucurbita moschata OX=3662 GN=LOC111463573 PE=3 SV=1)

HSP 1 Score: 532 bits (1371), Expect = 3.20e-191
Identity = 259/260 (99.62%), Postives = 260/260 (100.00%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLR+IPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRAIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 260
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]
BLAST of Cp4.1LG19g08850 vs. ExPASy TrEMBL
Match: A0A6J1BUD7 (60S ribosomal protein L8 OS=Momordica charantia OX=3673 GN=LOC111005865 PE=3 SV=1)

HSP 1 Score: 530 bits (1366), Expect = 1.85e-190
Identity = 256/260 (98.46%), Postives = 260/260 (100.00%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGV++EI+HDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVITEIVHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 260
           RRTGRLRGQAAATA+KADKA
Sbjct: 241 RRTGRLRGQAAATAAKADKA 260

[Close]
BLAST of Cp4.1LG19g08850 vs. ExPASy TrEMBL
Match: A0A7N2MYY1 (Ribosomal_L2_C domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 526 bits (1354), Expect = 1.25e-188
Identity = 252/260 (96.92%), Postives = 259/260 (99.62%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           +TFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKA L+VGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  ITFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSR+KLPSG+KK+VPSGCRAM+GQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADKA 260
           RRTGRLRGQAAATASKADKA
Sbjct: 241 RRTGRLRGQAAATASKADKA 260

[Close]
BLAST of Cp4.1LG19g08850 vs. ExPASy TrEMBL
Match: A0A7N2R6Q3 (Ribosomal_L2_C domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 526 bits (1354), Expect = 1.30e-188
Identity = 252/259 (97.30%), Postives = 258/259 (99.61%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           +TFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKA L+VGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  ITFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFARCSGDYAIVISHNPDNDTSR+KLPSG+KK+VPSGCRAM+GQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRVKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKADK 259
           RRTGRLRGQAAATASKADK
Sbjct: 241 RRTGRLRGQAAATASKADK 259

[Close]
BLAST of Cp4.1LG19g08850 vs. TAIR 10
Match: AT4G36130.1 (Ribosomal protein L2 family )

HSP 1 Score: 508.8 bits (1309), Expect = 2.5e-144
Identity = 241/258 (93.41%), Postives = 253/258 (98.06%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           V FRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA L+VGNVLPLRSIPEGAV+CNVEHHV
Sbjct: 61  VAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGVFAR SGDYAIVI+HNPDNDTSRIKLPSGSKK+VPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPG+KVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGKKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKAD 259
           RRTGRLRGQAAA ASKAD
Sbjct: 241 RRTGRLRGQAAALASKAD 258

[Close]
BLAST of Cp4.1LG19g08850 vs. TAIR 10
Match: AT2G18020.1 (Ribosomal protein L2 family )

HSP 1 Score: 503.1 bits (1294), Expect = 1.4e-142
Identity = 239/258 (92.64%), Postives = 253/258 (98.06%), Query Frame = 0 

Query: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLAR 60
           MGRVIRAQRKGAGSVFKSHTHHRKGPA+FRSLDFGERNGYLKGVV+EIIHDPGRGAPLAR
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 61  VTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHV 120
           VTFRHPFR+KKQ ELFVAAEGMYTGQF+YCGKKA L+VGNVLPLRSIPEGAVVCNVEHHV
Sbjct: 61  VTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHV 120

Query: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLL 180
           GDRGV AR SGDYAIVI+HNPD+DT+RIKLPSGSKK+VPSGCRAM+GQVAGGGRTEKP+L
Sbjct: 121 GDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPML 180

Query: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240
           KAGNAYHK+RVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 241 RRTGRLRGQAAATASKAD 259
           RRTGRLRGQAAA+A+KAD
Sbjct: 241 RRTGRLRGQAAASAAKAD 258

[Close]
BLAST of Cp4.1LG19g08850 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 459.5 bits (1181), Expect = 1.8e-129
Identity = 219/259 (84.56%), Postives = 238/259 (91.89%), Query Frame = 0 

Query: 1   MGRVIRAQRKG-AGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLA 60
           MGRVIRAQRKG AGSVFKSHTHHRKGPA+FRSLD+GERNGYLKG+V+EIIHDPGRGAPLA
Sbjct: 1   MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLKGLVTEIIHDPGRGAPLA 60

Query: 61  RVTFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHH 120
           RV FRHPFRY KQ ELFVAAEGMYTGQ++YCGKKANLMVGNVLPL SIPEGAV+CNVE H
Sbjct: 61  RVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPEGAVICNVELH 120

Query: 121 VGDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPL 180
           VGDRG  AR SGDYAIVI+HNP+++T+R+KLPSGSKK++PS CRAM+GQVAGGGRTEKPL
Sbjct: 121 VGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPL 180

Query: 181 LKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIA 240
           LKAGNAYHK++ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD   G KVG IA
Sbjct: 181 LKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDKSAGAKVGQIA 240

Query: 241 ARRTGRLRGQAAATASKAD 259
           ARRTGR RG AA  A+KAD
Sbjct: 241 ARRTGRRRGAAATLAAKAD 259

[Close]
BLAST of Cp4.1LG19g08850 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-22
Identity = 66/215 (30.70%), Postives = 103/215 (47.91%), Query Frame = 0 

Query: 4   VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTF 63
           +I A+ +G G        H++    +R +DF      + G +  I +DP R A +  + +
Sbjct: 46  IITARHRGGG--------HKR---LYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHY 105

Query: 64  RHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDR 123
                   +    +   G   G  +  G +  + +GN LPL  +P G  + N+E  +G  
Sbjct: 106 G-----DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRG 165

Query: 124 GVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLLKAG 183
           G  AR +G  A +I+   +  ++ +KLPSG  +++   C A VGQV   G  +K L +AG
Sbjct: 166 GQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG 225

Query: 184 NAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 215
           +          CW    P VRGV MNPV+HPHGGG
Sbjct: 226 S---------KCWLGKRPVVRGVVMNPVDHPHGGG 233

[Close]
BLAST of Cp4.1LG19g08850 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 104.0 bits (258), Expect = 1.9e-22
Identity = 66/215 (30.70%), Postives = 103/215 (47.91%), Query Frame = 0 

Query: 4   VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVSEIIHDPGRGAPLARVTF 63
           +I A+ +G G        H++    +R +DF      + G +  I +DP R A +  + +
Sbjct: 46  IITARHRGGG--------HKR---LYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHY 105

Query: 64  RHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLMVGNVLPLRSIPEGAVVCNVEHHVGDR 123
                   +    +   G   G  +  G +  + +GN LPL  +P G  + N+E  +G  
Sbjct: 106 G-----DGEKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRG 165

Query: 124 GVFARCSGDYAIVISHNPDNDTSRIKLPSGSKKVVPSGCRAMVGQVAGGGRTEKPLLKAG 183
           G  AR +G  A +I+   +  ++ +KLPSG  +++   C A VGQV   G  +K L +AG
Sbjct: 166 GQLARAAGAVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG 225

Query: 184 NAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 215
           +          CW    P VRGV MNPV+HPHGGG
Sbjct: 226 S---------KCWLGKRPVVRGVVMNPVDHPHGGG 233

The following BLAST results are available for this feature:
BLAST of Cp4.1LG19g08850 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P297665.5e-14493.0860S ribosomal protein L8 OS=Solanum lycopersicum OX=4081 GN=RPL8 PE=2 SV=1[more]
Q420643.5e-14393.4160S ribosomal protein L8-3 OS=Arabidopsis thaliana OX=3702 GN=RPL8C PE=2 SV=2[more]
P462861.9e-14192.6460S ribosomal protein L8-1 OS=Arabidopsis thaliana OX=3702 GN=RPL8A PE=1 SV=2[more]
P259984.3e-14191.9260S ribosomal protein L8 OS=Nicotiana tabacum OX=4097 GN=RPL8 PE=2 SV=1[more]
Q4PSL72.5e-12884.5660S ribosomal protein L8-2 OS=Arabidopsis thaliana OX=3702 GN=RPL8B PE=2 SV=3[more]
BLAST of Cp4.1LG19g08850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023003927.12.30e-191100.0060S ribosomal protein L8-3 [Cucurbita maxima] >XP_023518952.1 60S ribosomal prot... [more]
XP_022963335.16.60e-19199.6260S ribosomal protein L8-3 [Cucurbita moschata][more]
XP_022133211.13.82e-19098.4660S ribosomal protein L8 [Momordica charantia][more]
XP_023873292.12.58e-18896.9260S ribosomal protein L8-3 [Quercus suber] >XP_023874783.1 60S ribosomal protein... [more]
XP_030923722.12.68e-18897.3060S ribosomal protein L8-3-like [Quercus lobata][more]
BLAST of Cp4.1LG19g08850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KNZ21.11e-191100.0060S ribosomal protein L8-3 OS=Cucurbita maxima OX=3661 GN=LOC111497370 PE=3 SV=1[more]
A0A6J1HHP93.20e-19199.6260S ribosomal protein L8-3 OS=Cucurbita moschata OX=3662 GN=LOC111463573 PE=3 SV... [more]
A0A6J1BUD71.85e-19098.4660S ribosomal protein L8 OS=Momordica charantia OX=3673 GN=LOC111005865 PE=3 SV=... [more]
A0A7N2MYY11.25e-18896.92Ribosomal_L2_C domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1[more]
A0A7N2R6Q31.30e-18897.30Ribosomal_L2_C domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1[more]
BLAST of Cp4.1LG19g08850 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G36130.12.5e-14493.41Ribosomal protein L2 family [more]
AT2G18020.11.4e-14292.64Ribosomal protein L2 family [more]
AT3G51190.11.8e-12984.56Ribosomal protein L2 family [more]
ATCG00830.11.9e-2230.70ribosomal protein L2 [more]
ATCG01310.11.9e-2230.70ribosomal protein L2 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002171Ribosomal protein L2SMARTSM01383Ribosomal_L2_2coord: 11..90
e-value: 6.6E-33
score: 125.3
IPR002171Ribosomal protein L2PIRSFPIRSF002158RPL2p_RPL2a_RPL8e_RPL2ocoord: 1..255
e-value: 6.7E-70
score: 233.4
IPR002171Ribosomal protein L2PANTHERPTHR13691RIBOSOMAL PROTEIN L2coord: 1..260
IPR022669Ribosomal protein L2, C-terminalSMARTSM01382Ribosomal_L2_C_2coord: 96..231
e-value: 7.8E-69
score: 244.7
IPR022669Ribosomal protein L2, C-terminalPFAMPF03947Ribosomal_L2_Ccoord: 98..224
e-value: 2.9E-45
score: 153.5
IPR022666Ribosomal Proteins L2, RNA binding domainPFAMPF00181Ribosomal_L2coord: 13..90
e-value: 1.2E-17
score: 63.6
IPR014726Ribosomal protein L2, domain 3GENE3D4.10.950.10Ribosomal protein L2, domain 3coord: 170..247
e-value: 1.9E-43
score: 148.7
NoneNo IPR availableGENE3D2.40.50.140coord: 1..86
e-value: 1.8E-40
score: 138.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..230
NoneNo IPR availablePANTHERPTHR13691:SF4860S RIBOSOMAL PROTEIN L8coord: 1..260
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 90..169
e-value: 1.5E-26
score: 94.0
IPR022671Ribosomal protein L2, conserved sitePROSITEPS00467RIBOSOMAL_L2coord: 197..208
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 99..246
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g08850.1Cp4.1LG19g08850.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome