Cp4.1LG19g07930 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG19g07930
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionOrotidine 5'-phosphate decarboxylase
LocationCp4.1LG19: 6794421 .. 6798207 (+)
RNA-Seq ExpressionCp4.1LG19g07930
SyntenyCp4.1LG19g07930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCGTCCAAAGGATTCGAACTGGGGTGGCGGATAAGCCAAGAAAAGGAAAATAAAAAGGAAAACAAGAGTTTAATTTTATGGGGGTGTTGGGGAACCATTCGAAAAATTGGTGGCTTTGGATTCATTTACGATCATCCCTCAGATTCTTTGTCCACTAAATTACACAGATATTATTATGGAGTTCAATTCCCAAATACATCACTGCTTTGCCTGTCTTTCTCAACTAAATCACAATTGCTTCTTCTTCTCTTCGCATTTGATCTTCATCTACATCTTCACCAGGTTGGTCCCTTCGATTTCTTGCGTAATTTGTCTATCTTAATTTATTAGAATCGGTTTCGGATGTTCTTGATAGATAAAGGAAATGGGCATTAGATTATGGATGTGATTGTTCAAATTCCATGGCCCTAGAAATGAACCTTGTGAAGAAAGAAATGTTAGACAGGATGAGTTTTGTTATTTACTTGCTTGCTTCGTGGCTGGGTCAATGAAGTGTCTTTTATTTGGTAAATAGTAATCATAGTAAGGATGATAATCCCTCTTTGATTTGTATAAATTCCATTTTTGGTGAATGATATTCTTTCGTTCATTCATCAAAATGTATAGAACCCAGTTTTGAACTCCATTGTTGGTGGTGTTTTGGGATTTGATTTTATGTTCTCTTTCCTTTTCAGTTTTAAGGGTTTAGTATCCTTTCTTGCATCTGTTTGAAGGAAGTTGTATAATGGTTCAGTCATGTTGACGGTATATGCTCCGGGAGCTAACAAGAAATTTCTGGCATGTCTAGACTCTATTCCGCTGCTTGAGAATTCTCATGCTAATTCTCTTAGTTCTAGCTCCTCAGTTTCTCTGTGTTCTCTAAGGAGTTCTTGCAACAGCACTCTACACAATCCCTCATCTTTTAAAAGGTGTGGTCAATTATATACTCCTTGTGTTTTGAGCCGTTTCACTTCCAGAAGATGGCTAGTAAGTAGCTATCGAATTCCAGATTGAGTTTTGACATTTTCAGATTCTTATGCCTCAGGATTTGGAATAAATGACATATGTTTCTTTGAATATTTCAGTGCTGCTCGGATAGTTCCCCATCTCCTTCAGATGATGAATATCGCTCTTCACGCAACATAGCTATCAGTTTGTTCAGGCGATATCGGAATTTTGTTGACCGAGGAGGCAGTGACAACCTAAAGGTGCATTCTGTAGTTGAAGTGATCCTTCCTTTTCTAGTGAGATCTGTCTGCTATCTTCTTAAATTAACATGTCTGGTACTTATCAGGATTTCATTAGTGCTGGGGTGAATGCATATGCACTTGGTTGTACTGATGAAGGTTTAAGAAAGGAACTTATTGATATGAAGAAATCTGGTCTTGAAATTGAAGTAATGCAGAGTTGTGGTGGAATCACTGGTTTAAAATCCAAAATTATCTCAGAGGAGGTATGTTACGCCCCATCGATATGAACAAGCTTGTTTCATTGGCTATGCTAATGTTTTTCATGGATATTTCTGTTTGACGTTTATGCAATTTCCTGAATCTCGATTCTTGCTAAACTGCGAAGTTACCTTCATAGAGGGTGTGAATGAAACTTCATTATGTGCCTTTTTCCTTATTTCTCTTTGTGCAGATTGAAGAATGCATTCTGTGGCTGAGCATTGTATTCATCACCATCTTGTGTACACCACAACCAACTGTAGTTAGATGGTCATCTACACCTCCGGTGTCAGATGAAGTAAGGCTACAGTGGAAAGGCTTCTGTGCTCTCATTGCCAATGCATATTATGTGCGAGGCATGGCATGGTAAGGTGCTCTTTATATCATTTCTCACATCTCAATTAGTGTTGTTTGTAAACTGCTCATTCGTAATGAAATGAGCTATTAATTGTATCCATACTAGAGAATAACCATTTAGGCTTTATCTAGACTCCATTTGTTATTTTTTATGAAGGCTGCCTGTAAACACCCTACAACTTGAGCAAATGGCAGTGGTGGGAAGAGCGGAGGAACCTTCAGTTGTTGCTAGCCGAATGCTTCTAGTGTTCACCACACTTGAGGTATGTCTGAAACTGCTACAAGCTCCATGGATTATCCGCTACCAGTATTTCAATACAAGTTATTATGCAGCAATGAGGCATTGAAGTTTCATTATTGTGATATGTGCAGGTAGTTAGTCCACAATGGCCTAAAGTATAGACATGCAGAGATCGTGAATCAGATTTACTCGACCTTTTCTCTGGTTCAATTTGTAGCAAATTTGCAAATTATTCTTGAGAGCCATTTTTTCCTTTCAAATGATATTTATTGTCACAATTCATACATGTCACGATATTCCCATCGGAATAGAATACAGCTCTAATAAATTATTACCATATCTACTACCCCATTATCAGATGTTTGCTTCTCATGAATGCCAATCACAGGTAGAAAATTAATTTTTGCTTCTTCAACCCCTACAGATAATTACATGAACAGTTCTAAGTACTGAACTTCCACGGATCATCGACAATATTATCTGAGAAGTTTGACTTTGCATCTGCATATTTCATCAAATTTGCTCGAAAAACCACAAAATCAGGTATGAGGAAGGAGGAGCTAGAGAACTAGGAAGCATTTCCTGTTGGGACTATTATTCTGATAAAAGATTGTGTTTTTTGCATCTTTGTGCATGGACTGTTATGCATCAACTGCAGAATATGGATATGAGAAATATATTTCATCGGCTAATGCTCCTTTAGGGTATAAATGAAATCTATATCTGTTTCTAATCGCCAACATTCAATCAATTATCCATTCTACATAAAAGGTCAAAATTGATTTGATAAATATACAACAAAAAAGAATTAAAATCACAAATCAGAGGAAGTGGCAAGTGCTGTAGCATCTTTTAATGTTTTCCTTGCACGCCAACGAATTGCAGCTGCAGTTTCTGATGATCCCACCTGTAAAATCAGCAGGAACAAGAAAGAACTCATGAACACAAAGGAGGATAAGTGGATAACGCAATCATGTAAAATGTGACAGGAAAAACAGCAAAGGTGTGATTCATTTCTTCAGCCATAAGCACGTAGTTCAAAAGGCTAAAATCCTGTATTTCTCCTAAAGAATGAAGGAAAGCCCATCTAATGAAATGAAAATGATGGTGGATTTATACACACAGAACGGTTATACTGAATCAATGGTGAACGAATGATCAAAAGGATCTAATATAAAATAGTATGATTTAGAACGCATATCTATGAGGGATCAAAAAGAAAAAATCATTAAGCTGTCATGTACATTTCCATTATATAGAAACTGAAAGGTTACCTTGGATTCCATTATGTAATACTCTTGCCACAAACTAACATCTTGACCATAAGTTGCAAGTGCAGATTCAAATAGCTTTCGAGCACTTGCAAGACCATTTTTATCCCCTGCAGATGCAAGATTGGATTCCAGCTGAATACACGTTCGGTATATAGCAAGCCCTGGATGCGGTAATCCAAGAAATCTGTTGAAACAAGGAAAAAAAGGGTTTTCAGAAACTGAACTGGGAAACTTTGTAAAGCAGATTTCTTATATCATGGAGAACCACTAAACAAAAAATCTTATAAAAAAGGAATTCTCTGGTGTCGAATGACATACTTCTTATACACTTCTCTTGTACGCTGAATTCCATCTTTTTGTAGAACAAAATCAACAATGGCTGACGAGAGTGAGAACCCATCCTCACTGCCACCAGATTTAGCCAATGCTAAAAGAGAAATTTCCACCAATTGGTCAAAATAATGACTTTGATTGGCAAAAAACTTC

mRNA sequence

AATCGTCCAAAGGATTCGAACTGGGGTGGCGGATAAGCCAAGAAAAGGAAAATAAAAAGGAAAACAAGAGTTTAATTTTATGGGGGTGTTGGGGAACCATTCGAAAAATTGGTGGCTTTGGATTCATTTACGATCATCCCTCAGATTCTTTGTCCACTAAATTACACAGATATTATTATGGAGTTCAATTCCCAAATACATCACTGCTTTGCCTGTCTTTCTCAACTAAATCACAATTGCTTCTTCTTCTCTTCGCATTTGATCTTCATCTACATCTTCACCAGTTTTAAGGGTTTAGTATCCTTTCTTGCATCTGTTTGAAGGAAGTTGTATAATGGTTCAGTCATGTTGACGGTATATGCTCCGGGAGCTAACAAGAAATTTCTGGCATGTCTAGACTCTATTCCGCTGCTTGAGAATTCTCATGCTAATTCTCTTAGTTCTAGCTCCTCAGTTTCTCTGTGTTCTCTAAGGAGTTCTTGCAACAGCACTCTACACAATCCCTCATCTTTTAAAAGGTGTGGTCAATTATATACTCCTTGTGTTTTGAGCCGTTTCACTTCCAGAAGATGGCTATGCTGCTCGGATAGTTCCCCATCTCCTTCAGATGATGAATATCGCTCTTCACGCAACATAGCTATCAGTTTGTTCAGGCGATATCGGAATTTTGTTGACCGAGGAGGCAGTGACAACCTAAAGGATTTCATTAGTGCTGGGGTGAATGCATATGCACTTGGTTGTACTGATGAAGGTTTAAGAAAGGAACTTATTGATATGAAGAAATCTGGTCTTGAAATTGAAGTAATGCAGAGTTGTGGTGGAATCACTGGTTTAAAATCCAAAATTATCTCAGAGGAGATTGAAGAATGCATTCTGTGGCTGAGCATTGTATTCATCACCATCTTGTGTACACCACAACCAACTGTAGTTAGATGGTCATCTACACCTCCGGTGTCAGATGAAGTAAGGCTACAGTGGAAAGGCTTCTGTGCTCTCATTGCCAATGCATATTATGTGCGAGGCATGGCATGGCTGCCTGTAAACACCCTACAACTTGAGCAAATGGCAGTGGTGGGAAGAGCGGAGGAACCTTCAGTTGTTGCTAGCCGAATGCTTCTAGTGTTCACCACACTTGAGGTAGTTAGTCCACAATGGCCTAAAGTATAGACATGCAGAGATCGTGAATCAGATTTACTCGACCTTTTCTCTGGTTCAATTTGTAGCAAATTTGCAAATTATTCTTGAGAGCCATTTTTTCCTTTCAAATGATATTTATTGTCACAATTCATACATGTCACGATATTCCCATCGGAATAGAATACAGCTCTAATAAATTATTACCATATCTACTACCCCATTATCAGATGTTTGCTTCTCATGAATGCCAATCACAGGTAGAAAATTAATTTTTGCTTCTTCAACCCCTACAGATAATTACATGAACAGTTCTAAGTACTGAACTTCCACGGATCATCGACAATATTATCTGAGAAGTTTGACTTTGCATCTGCATATTTCATCAAATTTGCTCGAAAAACCACAAAATCAGGTATGAGGAAGGAGGAGCTAGAGAACTAGGAAGCATTTCCTGTTGGGACTATTATTCTGATAAAAGATTGTGTTTTTTGCATCTTTGTGCATGGACTGTTATGCATCAACTGCAGAATATGGATATGAGAAATATATTTCATCGGCTAATGCTCCTTTAGGGTATAAATGAAATCTATATCTGTTTCTAATCGCCAACATTCAATCAATTATCCATTCTACATAAAAGGTCAAAATTGATTTGATAAATATACAACAAAAAAGAATTAAAATCACAAATCAGAGGAAGTGGCAAGTGCTGTAGCATCTTTTAATGTTTTCCTTGCACGCCAACGAATTGCAGCTGCAGTTTCTGATGATCCCACCTGTAAAATCAGCAGGAACAAGAAAGAACTCATGAACACAAAGGAGGATAAGTGGATAACGCAATCATGTAAAATGTGACAGGAAAAACAGCAAAGGTGTGATTCATTTCTTCAGCCATAAGCACGTAGTTCAAAAGGCTAAAATCCTGTATTTCTCCTAAAGAATGAAGGAAAGCCCATCTAATGAAATGAAAATGATGGTGGATTTATACACACAGAACGGTTATACTGAATCAATGGTGAACGAATGATCAAAAGGATCTAATATAAAATAGTATGATTTAGAACGCATATCTATGAGGGATCAAAAAGAAAAAATCATTAAGCTGTCATGTACATTTCCATTATATAGAAACTGAAAGGTTACCTTGGATTCCATTATGTAATACTCTTGCCACAAACTAACATCTTGACCATAAGTTGCAAGTGCAGATTCAAATAGCTTTCGAGCACTTGCAAGACCATTTTTATCCCCTGCAGATGCAAGATTGGATTCCAGCTGAATACACGTTCGGTATATAGCAAGCCCTGGATGCGGTAATCCAAGAAATCTGTTGAAACAAGGAAAAAAAGGGTTTTCAGAAACTGAACTGGGAAACTTTGTAAAGCAGATTTCTTATATCATGGAGAACCACTAAACAAAAAATCTTATAAAAAAGGAATTCTCTGGTGTCGAATGACATACTTCTTATACACTTCTCTTGTACGCTGAATTCCATCTTTTTGTAGAACAAAATCAACAATGGCTGACGAGAGTGAGAACCCATCCTCACTGCCACCAGATTTAGCCAATGCTAAAAGAGAAATTTCCACCAATTGGTCAAAATAATGACTTTGATTGGCAAAAAACTTC

Coding sequence (CDS)

ATGTTGACGGTATATGCTCCGGGAGCTAACAAGAAATTTCTGGCATGTCTAGACTCTATTCCGCTGCTTGAGAATTCTCATGCTAATTCTCTTAGTTCTAGCTCCTCAGTTTCTCTGTGTTCTCTAAGGAGTTCTTGCAACAGCACTCTACACAATCCCTCATCTTTTAAAAGGTGTGGTCAATTATATACTCCTTGTGTTTTGAGCCGTTTCACTTCCAGAAGATGGCTATGCTGCTCGGATAGTTCCCCATCTCCTTCAGATGATGAATATCGCTCTTCACGCAACATAGCTATCAGTTTGTTCAGGCGATATCGGAATTTTGTTGACCGAGGAGGCAGTGACAACCTAAAGGATTTCATTAGTGCTGGGGTGAATGCATATGCACTTGGTTGTACTGATGAAGGTTTAAGAAAGGAACTTATTGATATGAAGAAATCTGGTCTTGAAATTGAAGTAATGCAGAGTTGTGGTGGAATCACTGGTTTAAAATCCAAAATTATCTCAGAGGAGATTGAAGAATGCATTCTGTGGCTGAGCATTGTATTCATCACCATCTTGTGTACACCACAACCAACTGTAGTTAGATGGTCATCTACACCTCCGGTGTCAGATGAAGTAAGGCTACAGTGGAAAGGCTTCTGTGCTCTCATTGCCAATGCATATTATGTGCGAGGCATGGCATGGCTGCCTGTAAACACCCTACAACTTGAGCAAATGGCAGTGGTGGGAAGAGCGGAGGAACCTTCAGTTGTTGCTAGCCGAATGCTTCTAGTGTTCACCACACTTGAGGTAGTTAGTCCACAATGGCCTAAAGTATAG

Protein sequence

MLTVYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNSTLHNPSSFKRCGQLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDFISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWLSIVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQMAVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV
Homology
BLAST of Cp4.1LG19g07930 vs. NCBI nr
Match: XP_023517939.1 (uncharacterized protein LOC111781523 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 542 bits (1397), Expect = 1.97e-194
Identity = 273/273 (100.00%), Postives = 273/273 (100.00%), Query Frame = 0

Query: 1   MLTVYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNSTLHNPSSFKRCG 60
           MLTVYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNSTLHNPSSFKRCG
Sbjct: 1   MLTVYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNSTLHNPSSFKRCG 60

Query: 61  QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120
           QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF
Sbjct: 61  QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120

Query: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWLS 180
           ISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWLS
Sbjct: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWLS 180

Query: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240
           IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM
Sbjct: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240

Query: 241 AVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV 273
           AVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV
Sbjct: 241 AVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV 273

BLAST of Cp4.1LG19g07930 vs. NCBI nr
Match: XP_023003047.1 (uncharacterized protein LOC111496772 [Cucurbita maxima])

HSP 1 Score: 532 bits (1371), Expect = 1.81e-190
Identity = 267/273 (97.80%), Postives = 271/273 (99.27%), Query Frame = 0

Query: 1   MLTVYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNSTLHNPSSFKRCG 60
           MLT+YAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSC+STLHNPSSFKRCG
Sbjct: 1   MLTIYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCSSTLHNPSSFKRCG 60

Query: 61  QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120
           QLYTPCVLSR  SRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF
Sbjct: 61  QLYTPCVLSRSASRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120

Query: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWLS 180
           ISAGVNAYALGCTDEGLRKELIDMKKSGL+IEVMQSCGGITGLKSKIISEEIEECILWLS
Sbjct: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLQIEVMQSCGGITGLKSKIISEEIEECILWLS 180

Query: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240
           IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM
Sbjct: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240

Query: 241 AVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV 273
           AVVGRAEEPSVVASRMLLVF+TLEVVSPQWPKV
Sbjct: 241 AVVGRAEEPSVVASRMLLVFSTLEVVSPQWPKV 273

BLAST of Cp4.1LG19g07930 vs. NCBI nr
Match: KAG6594670.1 (hypothetical protein SDJN03_11223, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026637.1 hypothetical protein SDJN02_10640 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 519 bits (1336), Expect = 2.92e-185
Identity = 263/273 (96.34%), Postives = 264/273 (96.70%), Query Frame = 0

Query: 1   MLTVYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNSTLHNPSSFKRCG 60
           MLTVYAPGANKKFLACLDSI LLENSHANSLSS        L+SSCNSTLHNPSSFKRCG
Sbjct: 1   MLTVYAPGANKKFLACLDSISLLENSHANSLSS--------LKSSCNSTLHNPSSFKRCG 60

Query: 61  QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120
           QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF
Sbjct: 61  QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120

Query: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWLS 180
           ISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWLS
Sbjct: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWLS 180

Query: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240
           IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM
Sbjct: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240

Query: 241 AVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV 273
           AVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV
Sbjct: 241 AVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV 265

BLAST of Cp4.1LG19g07930 vs. NCBI nr
Match: XP_022926893.1 (uncharacterized protein LOC111433871 [Cucurbita moschata])

HSP 1 Score: 516 bits (1328), Expect = 4.84e-184
Identity = 260/273 (95.24%), Postives = 264/273 (96.70%), Query Frame = 0

Query: 1   MLTVYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNSTLHNPSSFKRCG 60
           MLTVYAPGANKKFLACLDSI LLENSHANSLSS        L+SSCNSTLHNPSSFKRCG
Sbjct: 1   MLTVYAPGANKKFLACLDSISLLENSHANSLSS--------LKSSCNSTLHNPSSFKRCG 60

Query: 61  QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120
           QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF
Sbjct: 61  QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120

Query: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWLS 180
           ISAGVNAYALGCTDEGLRKELIDMKKSGL+IE+MQSCGGITGLKSKIISEEIEECILWLS
Sbjct: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLQIEIMQSCGGITGLKSKIISEEIEECILWLS 180

Query: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240
           IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM
Sbjct: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240

Query: 241 AVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV 273
           AVVGRAEEPSVVASRMLLVF+TLEVVSPQWPKV
Sbjct: 241 AVVGRAEEPSVVASRMLLVFSTLEVVSPQWPKV 265

BLAST of Cp4.1LG19g07930 vs. NCBI nr
Match: XP_038883022.1 (uncharacterized protein LOC120074097 isoform X2 [Benincasa hispida] >XP_038883023.1 uncharacterized protein LOC120074097 isoform X2 [Benincasa hispida] >XP_038883024.1 uncharacterized protein LOC120074097 isoform X2 [Benincasa hispida] >XP_038883025.1 uncharacterized protein LOC120074097 isoform X2 [Benincasa hispida])

HSP 1 Score: 473 bits (1217), Expect = 5.35e-167
Identity = 239/272 (87.87%), Postives = 252/272 (92.65%), Query Frame = 0

Query: 1   MLTVYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNSTLHNPSSFKRCG 60
           MLTV++PGANKKFLACLDSIPL E SHANSL  S+SVSLC L+SSCN+ LHNPSSFKRC 
Sbjct: 1   MLTVHSPGANKKFLACLDSIPLPEASHANSLICSTSVSLCPLKSSCNTILHNPSSFKRCT 60

Query: 61  QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120
           QL T CVL+RF  RRWLC SDSS  PSDDE+RSSRNIAISLFRRYRNFVDRGG DNLKDF
Sbjct: 61  QLNTHCVLNRFAFRRWLCRSDSSAPPSDDEFRSSRNIAISLFRRYRNFVDRGGGDNLKDF 120

Query: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWLS 180
           ISAGVNAYALGCTDEGLRKELIDMK+SGLEIEVMQS GG TGLKSKIIS EIEECILWLS
Sbjct: 121 ISAGVNAYALGCTDEGLRKELIDMKESGLEIEVMQSFGGSTGLKSKIISREIEECILWLS 180

Query: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240
           I+FITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPV TLQLEQ+
Sbjct: 181 IIFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVKTLQLEQV 240

Query: 241 AVVGRAEEPSVVASRMLLVFTTLEVVSPQWPK 272
           AVVGRAEEPS+VASRM +VF+TLEVVSPQWPK
Sbjct: 241 AVVGRAEEPSIVASRMRIVFSTLEVVSPQWPK 272

BLAST of Cp4.1LG19g07930 vs. ExPASy TrEMBL
Match: A0A6J1KLB5 (uncharacterized protein LOC111496772 OS=Cucurbita maxima OX=3661 GN=LOC111496772 PE=4 SV=1)

HSP 1 Score: 532 bits (1371), Expect = 8.76e-191
Identity = 267/273 (97.80%), Postives = 271/273 (99.27%), Query Frame = 0

Query: 1   MLTVYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNSTLHNPSSFKRCG 60
           MLT+YAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSC+STLHNPSSFKRCG
Sbjct: 1   MLTIYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCSSTLHNPSSFKRCG 60

Query: 61  QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120
           QLYTPCVLSR  SRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF
Sbjct: 61  QLYTPCVLSRSASRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120

Query: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWLS 180
           ISAGVNAYALGCTDEGLRKELIDMKKSGL+IEVMQSCGGITGLKSKIISEEIEECILWLS
Sbjct: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLQIEVMQSCGGITGLKSKIISEEIEECILWLS 180

Query: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240
           IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM
Sbjct: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240

Query: 241 AVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV 273
           AVVGRAEEPSVVASRMLLVF+TLEVVSPQWPKV
Sbjct: 241 AVVGRAEEPSVVASRMLLVFSTLEVVSPQWPKV 273

BLAST of Cp4.1LG19g07930 vs. ExPASy TrEMBL
Match: A0A6J1EJH0 (uncharacterized protein LOC111433871 OS=Cucurbita moschata OX=3662 GN=LOC111433871 PE=4 SV=1)

HSP 1 Score: 516 bits (1328), Expect = 2.34e-184
Identity = 260/273 (95.24%), Postives = 264/273 (96.70%), Query Frame = 0

Query: 1   MLTVYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNSTLHNPSSFKRCG 60
           MLTVYAPGANKKFLACLDSI LLENSHANSLSS        L+SSCNSTLHNPSSFKRCG
Sbjct: 1   MLTVYAPGANKKFLACLDSISLLENSHANSLSS--------LKSSCNSTLHNPSSFKRCG 60

Query: 61  QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120
           QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF
Sbjct: 61  QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120

Query: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWLS 180
           ISAGVNAYALGCTDEGLRKELIDMKKSGL+IE+MQSCGGITGLKSKIISEEIEECILWLS
Sbjct: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLQIEIMQSCGGITGLKSKIISEEIEECILWLS 180

Query: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240
           IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM
Sbjct: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240

Query: 241 AVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV 273
           AVVGRAEEPSVVASRMLLVF+TLEVVSPQWPKV
Sbjct: 241 AVVGRAEEPSVVASRMLLVFSTLEVVSPQWPKV 265

BLAST of Cp4.1LG19g07930 vs. ExPASy TrEMBL
Match: A0A0A0KHT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513620 PE=4 SV=1)

HSP 1 Score: 468 bits (1203), Expect = 3.65e-165
Identity = 240/274 (87.59%), Postives = 254/274 (92.70%), Query Frame = 0

Query: 1   MLTVYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNST-LHNPSSFKRC 60
           MLTVY+PGANKKFLACLDSIPL E SHANSL+ S+SVSLC L+SS ++T LHNPSSFKRC
Sbjct: 1   MLTVYSPGANKKFLACLDSIPLSEASHANSLNYSTSVSLCPLKSSSSNTILHNPSSFKRC 60

Query: 61  GQLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKD 120
            QL TPCVL+R + RR LC SDSSP PSDDEYRSSRNIAISLFRRYRNFVDRGG DNLKD
Sbjct: 61  TQLNTPCVLNRSSFRRCLCRSDSSPPPSDDEYRSSRNIAISLFRRYRNFVDRGGGDNLKD 120

Query: 121 FISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWL 180
           FISAGVNAYALGCTDEGLRKELIDMK++G EIEVMQS GG TGLKSKIIS EIEECILWL
Sbjct: 121 FISAGVNAYALGCTDEGLRKELIDMKEAGFEIEVMQSYGGSTGLKSKIISGEIEECILWL 180

Query: 181 SIVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQ 240
           SI+FITILCTPQPTVVRWSSTPPVSDE+RLQWKGFCALIANAYYVRGMAWLPV TLQLEQ
Sbjct: 181 SIIFITILCTPQPTVVRWSSTPPVSDEIRLQWKGFCALIANAYYVRGMAWLPVKTLQLEQ 240

Query: 241 MAVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV 273
           MAVVGRAEEPSVVASRM +VF+TLEVVSPQWPKV
Sbjct: 241 MAVVGRAEEPSVVASRMRIVFSTLEVVSPQWPKV 274

BLAST of Cp4.1LG19g07930 vs. ExPASy TrEMBL
Match: A0A1S3B037 (uncharacterized protein LOC103484620 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484620 PE=4 SV=1)

HSP 1 Score: 465 bits (1197), Expect = 2.89e-164
Identity = 236/273 (86.45%), Postives = 252/273 (92.31%), Query Frame = 0

Query: 1   MLTVYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNSTLHNPSSFKRCG 60
           MLTVY PGAN+KFLACLD IPL E S+ANSL+ S+SVS+C L+SSCN+ +HNPSSFKRC 
Sbjct: 1   MLTVYPPGANRKFLACLDFIPLSEASYANSLNYSTSVSVCPLKSSCNTIIHNPSSFKRCT 60

Query: 61  QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120
           QL T CVL+R + RR LC SDSSP PSDDEYRSSRNIAISLFRRYRNFVDRGG DNLKDF
Sbjct: 61  QLNTHCVLNRSSFRRCLCRSDSSPPPSDDEYRSSRNIAISLFRRYRNFVDRGGGDNLKDF 120

Query: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWLS 180
           ISAGVNAYALGCTDEGLRKELIDMK++GLEIEVMQS GG TGLKSKIIS EIEECILWLS
Sbjct: 121 ISAGVNAYALGCTDEGLRKELIDMKEAGLEIEVMQSYGGSTGLKSKIISGEIEECILWLS 180

Query: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240
           I+FITILCTPQPTVVRWSSTPPVSDE+RLQWKGFCALIANAYYVRGMAWLPV TLQLEQM
Sbjct: 181 IIFITILCTPQPTVVRWSSTPPVSDEIRLQWKGFCALIANAYYVRGMAWLPVKTLQLEQM 240

Query: 241 AVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV 273
           AVVGRAEEPSVVASRM +VF+TLEVVSPQWPKV
Sbjct: 241 AVVGRAEEPSVVASRMRIVFSTLEVVSPQWPKV 273

BLAST of Cp4.1LG19g07930 vs. ExPASy TrEMBL
Match: A0A1S3B053 (uncharacterized protein LOC103484620 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484620 PE=4 SV=1)

HSP 1 Score: 465 bits (1197), Expect = 1.27e-163
Identity = 236/273 (86.45%), Postives = 252/273 (92.31%), Query Frame = 0

Query: 1   MLTVYAPGANKKFLACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNSTLHNPSSFKRCG 60
           MLTVY PGAN+KFLACLD IPL E S+ANSL+ S+SVS+C L+SSCN+ +HNPSSFKRC 
Sbjct: 42  MLTVYPPGANRKFLACLDFIPLSEASYANSLNYSTSVSVCPLKSSCNTIIHNPSSFKRCT 101

Query: 61  QLYTPCVLSRFTSRRWLCCSDSSPSPSDDEYRSSRNIAISLFRRYRNFVDRGGSDNLKDF 120
           QL T CVL+R + RR LC SDSSP PSDDEYRSSRNIAISLFRRYRNFVDRGG DNLKDF
Sbjct: 102 QLNTHCVLNRSSFRRCLCRSDSSPPPSDDEYRSSRNIAISLFRRYRNFVDRGGGDNLKDF 161

Query: 121 ISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECILWLS 180
           ISAGVNAYALGCTDEGLRKELIDMK++GLEIEVMQS GG TGLKSKIIS EIEECILWLS
Sbjct: 162 ISAGVNAYALGCTDEGLRKELIDMKEAGLEIEVMQSYGGSTGLKSKIISGEIEECILWLS 221

Query: 181 IVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQLEQM 240
           I+FITILCTPQPTVVRWSSTPPVSDE+RLQWKGFCALIANAYYVRGMAWLPV TLQLEQM
Sbjct: 222 IIFITILCTPQPTVVRWSSTPPVSDEIRLQWKGFCALIANAYYVRGMAWLPVKTLQLEQM 281

Query: 241 AVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV 273
           AVVGRAEEPSVVASRM +VF+TLEVVSPQWPKV
Sbjct: 282 AVVGRAEEPSVVASRMRIVFSTLEVVSPQWPKV 314

BLAST of Cp4.1LG19g07930 vs. TAIR 10
Match: AT1G62250.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30 Blast hits to 30 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 295.8 bits (756), Expect = 3.5e-80
Identity = 167/277 (60.29%), Postives = 197/277 (71.12%), Query Frame = 0

Query: 1   MLTVYAPGANKKF---LACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNSTLHNPSSFK 60
           ML  Y  G   KF   ++C  ++   + S    L  S SVS  S+    N   ++ SSF 
Sbjct: 1   MLVAYPAGTINKFQIPISCYAALRRFKTSPFGPL-ISCSVSPRSIVPCSNVECYH-SSFS 60

Query: 61  RCGQLYTPCVLSRFTSRRWLCCSDSSPS-PSDDEYRSSRNIAISLFRRYRNFVDRGGSDN 120
              Q+           RRW+ C+  + S  SDDEYRSS NIAISL RRYR  + RG  + 
Sbjct: 61  TKYQIQ--------PRRRWMFCNSRNNSISSDDEYRSSPNIAISLLRRYRTVIGRGEGET 120

Query: 121 LKDFISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECI 180
           LK+FISAGVNAYALGCTDE LRKEL+ MK SGLEIE M++ GG T  KSKI   E++ECI
Sbjct: 121 LKEFISAGVNAYALGCTDEDLRKELMAMKDSGLEIERMENYGGSTQTKSKITLSEVDECI 180

Query: 181 LWLSIVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAWLPVNTLQ 240
           LWL IVFITILCTPQPTV+RWSSTP VSDE+  +W+GFCA+IANAYY+RGMAWLPV TLQ
Sbjct: 181 LWLRIVFITILCTPQPTVIRWSSTPSVSDEILSKWRGFCAVIANAYYIRGMAWLPVKTLQ 240

Query: 241 LEQMAVVGRAEEPSVVASRMLLVFTTLEVVSPQWPKV 274
           LEQMAV G++EEPSVVASRM LVF+TLEVVSPQWP+V
Sbjct: 241 LEQMAVTGQSEEPSVVASRMRLVFSTLEVVSPQWPRV 267

BLAST of Cp4.1LG19g07930 vs. TAIR 10
Match: AT1G62250.2 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 225.3 bits (573), Expect = 5.8e-59
Identity = 130/233 (55.79%), Postives = 156/233 (66.95%), Query Frame = 0

Query: 1   MLTVYAPGANKKF---LACLDSIPLLENSHANSLSSSSSVSLCSLRSSCNSTLHNPSSFK 60
           ML  Y  G   KF   ++C  ++   + S    L  S SVS  S+    N   ++ SSF 
Sbjct: 1   MLVAYPAGTINKFQIPISCYAALRRFKTSPFGPL-ISCSVSPRSIVPCSNVECYH-SSFS 60

Query: 61  RCGQLYTPCVLSRFTSRRWLCCSDSSPS-PSDDEYRSSRNIAISLFRRYRNFVDRGGSDN 120
              Q+           RRW+ C+  + S  SDDEYRSS NIAISL RRYR  + RG  + 
Sbjct: 61  TKYQIQ--------PRRRWMFCNSRNNSISSDDEYRSSPNIAISLLRRYRTVIGRGEGET 120

Query: 121 LKDFISAGVNAYALGCTDEGLRKELIDMKKSGLEIEVMQSCGGITGLKSKIISEEIEECI 180
           LK+FISAGVNAYALGCTDE LRKEL+ MK SGLEIE M++ GG T  KSKI   E++ECI
Sbjct: 121 LKEFISAGVNAYALGCTDEDLRKELMAMKDSGLEIERMENYGGSTQTKSKITLSEVDECI 180

Query: 181 LWLSIVFITILCTPQPTVVRWSSTPPVSDEVRLQWKGFCALIANAYYVRGMAW 230
           LWL IVFITILCTPQPTV+RWSSTP VSDE+  +W+GFCA+IANAYY+RGMAW
Sbjct: 181 LWLRIVFITILCTPQPTVIRWSSTPSVSDEILSKWRGFCAVIANAYYIRGMAW 223

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023517939.11.97e-194100.00uncharacterized protein LOC111781523 [Cucurbita pepo subsp. pepo][more]
XP_023003047.11.81e-19097.80uncharacterized protein LOC111496772 [Cucurbita maxima][more]
KAG6594670.12.92e-18596.34hypothetical protein SDJN03_11223, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022926893.14.84e-18495.24uncharacterized protein LOC111433871 [Cucurbita moschata][more]
XP_038883022.15.35e-16787.87uncharacterized protein LOC120074097 isoform X2 [Benincasa hispida] >XP_03888302... [more]
Match NameE-valueIdentityDescription
A0A6J1KLB58.76e-19197.80uncharacterized protein LOC111496772 OS=Cucurbita maxima OX=3661 GN=LOC111496772... [more]
A0A6J1EJH02.34e-18495.24uncharacterized protein LOC111433871 OS=Cucurbita moschata OX=3662 GN=LOC1114338... [more]
A0A0A0KHT13.65e-16587.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513620 PE=4 SV=1[more]
A0A1S3B0372.89e-16486.45uncharacterized protein LOC103484620 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3B0531.27e-16386.45uncharacterized protein LOC103484620 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
AT1G62250.13.5e-8060.29unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXP... [more]
AT1G62250.25.8e-5955.79unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXP... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37197F19K23.17 PROTEINcoord: 1..272

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g07930.1Cp4.1LG19g07930.1mRNA