Cp4.1LG19g07640 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g07640
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Octicosapeptide/Phox/Bem1p domain-containing family protein
Location	Cp4.1LG19: 6920258 .. 6920542 (-)
RNA-Seq Expression	Cp4.1LG19g07640
Synteny	Cp4.1LG19g07640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGATTCATCCATCGGAACTTGACTCCAACGCGACCGACTCTGTTGCGTCATCGCCGAGGTCCGACCACCACTTTAACTTATCTAACGATCCACATGCTCGAGTTCGATTCATGTGCAGTTTTGGTGGCAAGATCTTACCCCGACCGCATGATAATCAGCTCCGGTACGTCGGTGGCGAGACTCGCATTGTCGCGGTTCAACGGTCCACTACTTTCTCCCACTTTCTCGCCAAACTCGCTAAGATCACGGGCAAGTTGATTTTGTATAATTCTGAATGA

mRNA sequence

ATGGCGTCGATTCATCCATCGGAACTTGACTCCAACGCGACCGACTCTGTTGCGTCATCGCCGAGGTCCGACCACCACTTTAACTTATCTAACGATCCACATGCTCGAGTTCGATTCATGTGCAGTTTTGGTGGCAAGATCTTACCCCGACCGCATGATAATCAGCTCCGGTACGTCGGTGGCGAGACTCGCATTGTCGCGGTTCAACGGTCCACTACTTTCTCCCACTTTCTCGCCAAACTCGCTAAGATCACGGGCAAGTTGATTTTGTATAATTCTGAATGA

Coding sequence (CDS)

ATGGCGTCGATTCATCCATCGGAACTTGACTCCAACGCGACCGACTCTGTTGCGTCATCGCCGAGGTCCGACCACCACTTTAACTTATCTAACGATCCACATGCTCGAGTTCGATTCATGTGCAGTTTTGGTGGCAAGATCTTACCCCGACCGCATGATAATCAGCTCCGGTACGTCGGTGGCGAGACTCGCATTGTCGCGGTTCAACGGTCCACTACTTTCTCCCACTTTCTCGCCAAACTCGCTAAGATCACGGGCAAGTTGATTTTGTATAATTCTGAATGA

Protein sequence

MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVGGETRIVAVQRSTTFSHFLAKLAKITGKLILYNSE

Homology

[Close]

BLAST of Cp4.1LG19g07640 vs. NCBI nr
Match: KAA0052731.1 (octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. makuwa] >TYK13092.1 octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. makuwa])

HSP 1 Score: 176 bits (446), Expect = 2.85e-55
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0


Query: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60
          MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGG ILPRPHDNQLRYVG
Sbjct: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGNILPRPHDNQLRYVG 60

Query: 61 GETRIVAVQRSTTFSHFLAKLAKITGK 87
          GETRIVAVQRSTTFSHFLAKLAKITGK
Sbjct: 61 GETRIVAVQRSTTFSHFLAKLAKITGK 87

[Close]

BLAST of Cp4.1LG19g07640 vs. NCBI nr
Match: KAG7026608.1 (hypothetical protein SDJN02_10610, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 178 bits (451), Expect = 7.16e-52
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60
          MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG
Sbjct: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60

Query: 61 GETRIVAVQRSTTFSHFLAKLAKITGK 87
          GETRIVAVQRSTTFSHFLAKLAKITGK
Sbjct: 61 GETRIVAVQRSTTFSHFLAKLAKITGK 87

[Close]

BLAST of Cp4.1LG19g07640 vs. NCBI nr
Match: XP_023002937.1 (uncharacterized protein LOC111496695 [Cucurbita maxima] >XP_023002938.1 uncharacterized protein LOC111496695 [Cucurbita maxima] >XP_023002940.1 uncharacterized protein LOC111496695 [Cucurbita maxima])

HSP 1 Score: 176 bits (447), Expect = 2.32e-51
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60
          MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG
Sbjct: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60

Query: 61 GETRIVAVQRSTTFSHFLAKLAKITGKL 88
          GETRIVAVQRSTTFSHFLAKLAKITG +
Sbjct: 61 GETRIVAVQRSTTFSHFLAKLAKITGTI 88

[Close]

BLAST of Cp4.1LG19g07640 vs. NCBI nr
Match: XP_023517785.1 (uncharacterized protein LOC111781436 [Cucurbita pepo subsp. pepo] >XP_023517786.1 uncharacterized protein LOC111781436 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176 bits (447), Expect = 2.32e-51
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60
          MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG
Sbjct: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60

Query: 61 GETRIVAVQRSTTFSHFLAKLAKITGKL 88
          GETRIVAVQRSTTFSHFLAKLAKITG +
Sbjct: 61 GETRIVAVQRSTTFSHFLAKLAKITGTI 88

[Close]

BLAST of Cp4.1LG19g07640 vs. NCBI nr
Match: XP_022926693.1 (clathrin interactor EPSIN 3-like [Cucurbita moschata] >XP_022926694.1 clathrin interactor EPSIN 3-like [Cucurbita moschata] >XP_022926695.1 clathrin interactor EPSIN 3-like [Cucurbita moschata])

HSP 1 Score: 174 bits (442), Expect = 1.28e-50
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60
          MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG
Sbjct: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60

Query: 61 GETRIVAVQRSTTFSHFLAKLAKITGKL 88
          GETRIVAVQRST FSHFLAKLAKITG +
Sbjct: 61 GETRIVAVQRSTAFSHFLAKLAKITGTI 88

[Close]

BLAST of Cp4.1LG19g07640 vs. ExPASy TrEMBL
Match: A0A5D3CP14 (Octicosapeptide/Phox/Bem1p domain-containing family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007000 PE=4 SV=1)

HSP 1 Score: 176 bits (446), Expect = 1.38e-55
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0


Query: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60
          MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGG ILPRPHDNQLRYVG
Sbjct: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGNILPRPHDNQLRYVG 60

Query: 61 GETRIVAVQRSTTFSHFLAKLAKITGK 87
          GETRIVAVQRSTTFSHFLAKLAKITGK
Sbjct: 61 GETRIVAVQRSTTFSHFLAKLAKITGK 87

[Close]

BLAST of Cp4.1LG19g07640 vs. ExPASy TrEMBL
Match: A0A6J1KQD9 (uncharacterized protein LOC111496695 OS=Cucurbita maxima OX=3661 GN=LOC111496695 PE=4 SV=1)

HSP 1 Score: 176 bits (447), Expect = 1.12e-51
Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60
          MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG
Sbjct: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60

Query: 61 GETRIVAVQRSTTFSHFLAKLAKITGKL 88
          GETRIVAVQRSTTFSHFLAKLAKITG +
Sbjct: 61 GETRIVAVQRSTTFSHFLAKLAKITGTI 88

[Close]

BLAST of Cp4.1LG19g07640 vs. ExPASy TrEMBL
Match: A0A1S3B0N7 (uncharacterized protein LOC103484567 OS=Cucumis melo OX=3656 GN=LOC103484567 PE=4 SV=1)

HSP 1 Score: 174 bits (442), Expect = 6.22e-51
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60
          MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGG ILPRPHDNQLRYVG
Sbjct: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGNILPRPHDNQLRYVG 60

Query: 61 GETRIVAVQRSTTFSHFLAKLAKITGKL 88
          GETRIVAVQRSTTFSHFLAKLAKITG +
Sbjct: 61 GETRIVAVQRSTTFSHFLAKLAKITGTI 88

[Close]

BLAST of Cp4.1LG19g07640 vs. ExPASy TrEMBL
Match: A0A6J1ELV4 (clathrin interactor EPSIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111433745 PE=4 SV=1)

HSP 1 Score: 174 bits (442), Expect = 6.22e-51
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60
          MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG
Sbjct: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60

Query: 61 GETRIVAVQRSTTFSHFLAKLAKITGKL 88
          GETRIVAVQRST FSHFLAKLAKITG +
Sbjct: 61 GETRIVAVQRSTAFSHFLAKLAKITGTI 88

[Close]

BLAST of Cp4.1LG19g07640 vs. ExPASy TrEMBL
Match: A0A0A0KLC3 (PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516800 PE=4 SV=1)

HSP 1 Score: 174 bits (442), Expect = 6.22e-51
Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 0


Query: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60
          MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGG ILPRPHDNQLRYVG
Sbjct: 1  MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGNILPRPHDNQLRYVG 60

Query: 61 GETRIVAVQRSTTFSHFLAKLAKITGKL 88
          GETRIVAVQRSTTFSHFLAKLAKITG +
Sbjct: 61 GETRIVAVQRSTTFSHFLAKLAKITGTI 88

[Close]

BLAST of Cp4.1LG19g07640 vs. TAIR 10
Match: AT4G05150.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 100.5 bits (249), Expect = 7.5e-22
Identity = 54/87 (62.07%), Postives = 66/87 (75.86%), Query Frame = 0


Query: 1   MASIHPSELDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVG 60
           MASI P ELD+   DS+ASSPRS++      D   RVRFMC+FGG+ILPRP DNQL YVG
Sbjct: 32  MASIPPPELDN---DSLASSPRSEY------DSQPRVRFMCTFGGRILPRPPDNQLCYVG 91

Query: 61  GETRIVAVQRSTTFSHFLAKLAKITGK 88
           G+ R+VAV R TTF+  L+KLAK++GK
Sbjct: 92  GDNRMVAVHRHTTFASLLSKLAKLSGK 109

[Close]

BLAST of Cp4.1LG19g07640 vs. TAIR 10
Match: AT5G49920.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 71.2 bits (173), Expect = 4.9e-13
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0


Query: 35 ARVRFMCSFGGKILPRPHDNQLRYVGGETRIVAVQRSTTFSHFLAKLAKIT 86
          ++V+FMCSFGG+ILPRP D+ L+YVGGETR+VAV    +FS  + KL  IT
Sbjct: 8  SKVKFMCSFGGRILPRPSDSVLKYVGGETRVVAVSPDISFSELMKKLTAIT 58

[Close]

BLAST of Cp4.1LG19g07640 vs. TAIR 10
Match: AT5G64430.1 (Octicosapeptide/Phox/Bem1p family protein )

HSP 1 Score: 69.3 bits (168), Expect = 1.8e-12
Identity = 39/85 (45.88%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 15 DSVASSPRSDHHFNLSNDP------------HA-RVRFMCSFGGKILPRPHDNQLRYVGG 74
          DS  SSPRS       N P            H+ +V+FMCS+GGKI PRPHDNQL YV G
Sbjct: 11 DSTDSSPRS-REIEFDNPPPPWDDQNQNQQQHSYKVKFMCSYGGKIQPRPHDNQLTYVNG 70

Query: 75 ETRIVAVQRSTTFSHFLAKLAKITG 87
          ET+I++V R   F    +KL+ + G
Sbjct: 71 ETKILSVDRGIRFPVLASKLSTVCG 94

[Close]

BLAST of Cp4.1LG19g07640 vs. TAIR 10
Match: AT5G57610.1 (Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain )

HSP 1 Score: 68.9 bits (167), Expect = 2.4e-12
Identity = 35/76 (46.05%), Postives = 53/76 (69.74%), Query Frame = 0


Query: 9  LDSNATDSVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVGGETRIVAV 68
          +DS + +S  +S  S    +L+++PH RV+F+CSF G ILPRP D +LRYVGGETRIV+V
Sbjct: 1  MDSGSVNSSVTSLVS----SLNDEPH-RVKFLCSFLGSILPRPQDGKLRYVGGETRIVSV 60

Query: 69 QRSTTFSHFLAKLAKI 85
           R   +   ++K+ ++
Sbjct: 61 NRDIRYEELMSKMREL 71

[Close]

BLAST of Cp4.1LG19g07640 vs. TAIR 10
Match: AT2G35050.1 (Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain )

HSP 1 Score: 67.8 bits (164), Expect = 5.4e-12
Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 0


Query: 16  SVASSPRSDHHFNLSNDPHARVRFMCSFGGKILPRPHDNQLRYVGGETRIVAVQRSTTFS 75
           S+ SS  SD   N       R +F+CSFGGK++PRP D +LRYVGGETRI+ + ++ +F 
Sbjct: 163 SLVSSRASDSSLN-------RAKFLCSFGGKVIPRPRDQKLRYVGGETRIIRISKTISFQ 222

Query: 76  HFLAKLAKI 85
             + K+ +I
Sbjct: 223 ELMHKMKEI 224

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g07640 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG19g07640 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0052731.1	2.85e-55	98.85	octicosapeptide/Phox/Bem1p domain-containing family protein [Cucumis melo var. m...	[more]
KAG7026608.1	7.16e-52	100.00	hypothetical protein SDJN02_10610, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023002937.1	2.32e-51	97.73	uncharacterized protein LOC111496695 [Cucurbita maxima] >XP_023002938.1 uncharac...	[more]
XP_023517785.1	2.32e-51	97.73	uncharacterized protein LOC111781436 [Cucurbita pepo subsp. pepo] >XP_023517786....	[more]
XP_022926693.1	1.28e-50	96.59	clathrin interactor EPSIN 3-like [Cucurbita moschata] >XP_022926694.1 clathrin i...	[more]

BLAST of Cp4.1LG19g07640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CP14	1.38e-55	98.85	Octicosapeptide/Phox/Bem1p domain-containing family protein OS=Cucumis melo var....	[more]
A0A6J1KQD9	1.12e-51	97.73	uncharacterized protein LOC111496695 OS=Cucurbita maxima OX=3661 GN=LOC111496695...	[more]
A0A1S3B0N7	6.22e-51	96.59	uncharacterized protein LOC103484567 OS=Cucumis melo OX=3656 GN=LOC103484567 PE=...	[more]
A0A6J1ELV4	6.22e-51	96.59	clathrin interactor EPSIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111433745 P...	[more]
A0A0A0KLC3	6.22e-51	96.59	PB1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G516800 PE=4 SV...	[more]

BLAST of Cp4.1LG19g07640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G05150.1	7.5e-22	62.07	Octicosapeptide/Phox/Bem1p family protein	[more]
AT5G49920.1	4.9e-13	60.78	Octicosapeptide/Phox/Bem1p family protein	[more]
AT5G64430.1	1.8e-12	45.88	Octicosapeptide/Phox/Bem1p family protein	[more]
AT5G57610.1	2.4e-12	46.05	Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain	[more]
AT2G35050.1	5.4e-12	44.93	Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR31066	OS05G0427100 PROTEIN-RELATED	coord: 1..87
None	No IPR available	PANTHER	PTHR31066:SF33	OCTICOSAPEPTIDE/PHOX/BEM1P	coord: 1..87
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 52..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g07640.1	Cp4.1LG19g07640.1	mRNA