Cp4.1LG19g07300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g07300
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-type domain-containing protein
Location	Cp4.1LG19: 7064031 .. 7067440 (+)
RNA-Seq Expression	Cp4.1LG19g07300
Synteny	Cp4.1LG19g07300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTCCTTTTTAAATAAATTTATTGCGATTGTCTAATTAATATTTCAAATATTTTATTTCTTCCGACGCTCGCGACGAGCCGTATATCTGCCACGTGTCCCCCCACTATCTGCTTCGCCTTCAAGAGGCACTGCACCGAAGCAACACGAAGGTCTAAAACACACACTCTCCTAGAGGAAAAAAGGAGAGAAGACGGGACTCGCACGCTGCCTACCCACTCCCAGAGAGAGAAATNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGCTTTTTGGAGGGGAAATTTGAAGGAATTGGTTGCGTTTTGCTTGATTTTTACCCTTTGGGTGGATATGTATGTATCTTCCATGAGAAAGTCGTTCAAGGACTCCCTCAAAGTGCTTGAAGCTGATATTCAGCATGCTAATACTCTGTAAGTGAGCTTTGATTTTTCCTTTTTTTTGGGGGTTTCTCTGTTCTTACAATTTCGTATTTGACTGTCTATTGTAGTTTTTTGCCTGATCACTTTTGGGGTTTTGGCTTCGCCCCCTCAATTTTGCTTGAAATGTAATTTCTGGATTTTGATTTTTAGTACTGTGGATCTTGAAGTTGCTGTTTTTGAGTAATTATATTTGTCAACGATGGTTTATATCTTGGTAAAGACAAGTTTCGTTTCTCTCTGTTTTACGGCTCAATTTCTTGAAGGGTAAATAGTTTGCTCATTTGTCGTTAGATGATTTGTCAATGGTTCCCCACATTGAGTTTTTGGTCATCATTTTCATGAATTGTTCTTTGGTTTATTGGTGATGTGTTTTAGGACCTTCTCTATGCTCTCTGCATCTCACTGTGGTCTTGTTGTACAGATTATGAATAATGATCGACATATTCTTGAACTCGGGAAGCCGATTCTTTGTGTATCTCTCACCTATGAGTCGAATGTATCATTGTTTTGGTTCTCTTTGTGGAATGCCTGTTTTTGCAGTATCAATATCGTGCCTTTTCATTCTATTTTTACAAGTTTGCTATTGTCTTCAACCGATTCTTCTGCTTTTTCATTCTTTTTCGTGCTTTTGTTTTTAAATCTTGCCTTCATTGCCCAAAACCCTTTGCTCTGTTTTGTATAATTTAAGGGATGTCACCTAGTTGTAGTGATCCCTTATGTAAAACCAAACTTGAATTGTATAGTAGTTTCTTTGAGAGACTAGTTTATAACCCATTTAATATCGTTTCTATCTCTCGAGACGTAAGTGCTTTTCTGTAACATTTTTTCACTTATTCCAGAAGCTGCATTTACATTTTGCCGTGTGATAACTCCTTCCTATTTCCTAATAATGAATGAAAAAGGCATACTTCCTTTAAAATTAAATAAAAAATTACTTAGCAACAACAATTTCTTAGTTTTTTTGTTCTTTTTTAATTTTAAGTTGTGAGAAATATGATCTTGTCTAGGAAAGATGAAAATATCCAATATGTCATAGTTTTTTATATTATGAATCATGCTCTGTGCCCAGGCTATGAAAATTGACAGATGAATTAAAAGCTGAAATGTTTGAATGCTTGTGATTTCTTGCAATGCTTGGAGATTCTCAAGATTGCTGGTTTTGTCAGATATCTCAACTTAATGTTTAATTATTCCTGAGTTGTAGGGCATCGGAGTTTCCCGGGGAATATGATGGTCCCTGTCTTCAGATGAGAATATCATACAGTCCTGCTGCTCACTTGTTCCTCTTCCTAGTGCAATGGACAGACTGCCATCTTGCAGGAGCCCTTGGACTGCTGAGAATTTTAATTTACAAGGTTAAGTTTGTTGCCTCATAGCATTATATTTTGTAATCATCCCTAAAATCCATTTATCGTGTTAACATTGCTGAATTCACCACGTATCTTGTGCTGCAGGTCTATGTGGATGGTACGACCACCATGTCCACCAACGAGAGAAAAGCAAGCATCAGGGAATTCTATGGTAGTGTCTGAATTTCGCATTTTCCATCAGATGATTGTTTGATATATATGTATATTGTGACTGCTGACTTCTTTAACTGTGCTATGATCAGCTGTTATTTACCCGTCTCTATTGCAACTTCAGAGAGGTGTTACCGATACCGAAGATAAAAAGCAGAAGGCTGTCTGCATGGAAAGGTATCGAAGAAGAGATGACGACGAACTTATATGGTCTTCAGATATTGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGCAAGGTTGTATTGCCCAACTGCAACCATGCCTTGTGCTTGAAATGTTACCGTGAATGGTACTCTCATCTCTTTTGTTCTTCATTTTCAGTTTTCTCTTTAACTTATTTCACTAGGCGGGATTAATTATGGGTTCTTAAGGCTATCTACAGAGTCCCTTAACAAAATTTTCCTGTACACATTAAGCCTTCTGTTCATCTTTAGTTAATTGGATAGATGCCTCATGATACTTCATTTTAAGCGATTTAAGATCAAGACAATTAATTGTTTGATACCCTCATCCGATTTGGCATATCTCCGATTTGATTGTCTTGCATGTGGAGTATCATTTGGCATATCTCTTCCAATTAATGCTTCTTCTGATGAATTATAGACTCAGCAGTCAGCTCTTTCTGGACTACCTCTTGAATTGAATCTGTTTTCTACTTTCTACCTTATATCAACTTCTAATAGTTTTATTGTTCTATTGAATGTACTTCAGGCAAACACGTTCCCAGTCGTGCCCATTCTGTCGTGACAGTCTTAAGAGAGTAAATTCTGGCGATCTCTGGGTATTTACTGATAACAGGGACATTGTGGACATGGCGACAGTGACTCGAGAGAATCTGCAAAGGCTTTTCAAGTACATAGACAAACTGCCTTTGATTGTTCCAGACTCCCTCTTCGACACCTACGATACTCATCTAAGATAAGTGATCGGTACATACGTAATCTAATGTCACTCTTTTAGGTAGTTTTTCTCCAAATGAATAGTCCTTTTGGCATGAGAGGCCATGACAAAAGCACTGAAATGCATTCGGCTAAAAAATAGTAAAAGCTAGAGAAGACAAGCCAACTGTTTCTTCCCACCTCCATTTCTGAAGGGGAAAAAACCAGTCTTGAGTTATTGTAGGGCTGGTGTGTTGGGTGGTGAAGTTGATATAGTTTGATTTGAAGTCTTCCATAAAAATTGTATTTAGCACATTTGTACATGTTTGTACATTCTTGATGTTATCTATCAAAGCAGCTTTGAATGCTTTATTTTTCTTTGCAAGTAGGGGAAATTGGAAAAGATCTCTCGAGATTTCTAATGATTTCCTTACCAAATCATTAATAGCAAAAAACAGGTCATGTGATGATAACAGGAAATTGATGGGTTATGAGTGTGATGATGATGGTGATGAACATTCAACCACTTTT

mRNA sequence

TTTTTTCCTTTTTAAATAAATTTATTGCGATTGTCTAATTAATATTTCAAATATTTTATTTCTTCCGACGCTCGCGACGAGCCGTATATCTGCCACGTGTCCCCCCACTATCTGCTTCGCCTTCAAGAGGCACTGCACCGAAGCAACACGAAGGTCTAAAACACACACTCTCCTAGAGGAAAAAAGGAGAGAAGACGGGACTCGCACGCTGCCTACCCACTCCCAGAGAGAGAAATNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGCTTTTTGGAGGGGAAATTTGAAGGAATTGGTTGCGTTTTGCTTGATTTTTACCCTTTGGGTGGATATGTATGTATCTTCCATGAGAAAGTCGTTCAAGGACTCCCTCAAAGTGCTTGAAGCTGATATTCAGCATGCTAATACTCTGGCATCGGAGTTTCCCGGGGAATATGATGGTCCCTGTCTTCAGATGAGAATATCATACAGTCCTGCTGCTCACTTGTTCCTCTTCCTAGTGCAATGGACAGACTGCCATCTTGCAGGAGCCCTTGGACTGCTGAGAATTTTAATTTACAAGGTCTATGTGGATGGTACGACCACCATGTCCACCAACGAGAGAAAAGCAAGCATCAGGGAATTCTATGCTGTTATTTACCCGTCTCTATTGCAACTTCAGAGAGGTGTTACCGATACCGAAGATAAAAAGCAGAAGGCTGTCTGCATGGAAAGGTATCGAAGAAGAGATGACGACGAACTTATATGGTCTTCAGATATTGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGCAAGGTTGTATTGCCCAACTGCAACCATGCCTTGTGCTTGAAATGTTACCGTGAATGGCAAACACGTTCCCAGTCGTGCCCATTCTGTCGTGACAGTCTTAAGAGAGTAAATTCTGGCGATCTCTGGGTATTTACTGATAACAGGGACATTGTGGACATGGCGACAGTGACTCGAGAGAATCTGCAAAGGCTTTTCAAGTACATAGACAAACTGCCTTTGATTGTTCCAGACTCCCTCTTCGACACCTACGATACTCATCTAAGATAAGTGATCGGTACATACGTAATCTAATGTCACTCTTTTAGGTAGTTTTTCTCCAAATGAATAGTCCTTTTGGCATGAGAGGCCATGACAAAAGCACTGAAATGCATTCGGCTAAAAAATAGTAAAAGCTAGAGAAGACAAGCCAACTGTTTCTTCCCACCTCCATTTCTGAAGGGGAAAAAACCAGTCTTGAGTTATTGTAGGGCTGGTGTGTTGGGTGGTGAAGTTGATATAGTTTGATTTGAAGTCTTCCATAAAAATTGTATTTAGCACATTTGTACATGTTTGTACATTCTTGATGTTATCTATCAAAGCAGCTTTGAATGCTTTATTTTTCTTTGCAAGTAGGGGAAATTGGAAAAGATCTCTCGAGATTTCTAATGATTTCCTTACCAAATCATTAATAGCAAAAAACAGGTCATGTGATGATAACAGGAAATTGATGGGTTATGAGTGTGATGATGATGGTGATGAACATTCAACCACTTTT

Coding sequence (CDS)

ATGTATGTATCTTCCATGAGAAAGTCGTTCAAGGACTCCCTCAAAGTGCTTGAAGCTGATATTCAGCATGCTAATACTCTGGCATCGGAGTTTCCCGGGGAATATGATGGTCCCTGTCTTCAGATGAGAATATCATACAGTCCTGCTGCTCACTTGTTCCTCTTCCTAGTGCAATGGACAGACTGCCATCTTGCAGGAGCCCTTGGACTGCTGAGAATTTTAATTTACAAGGTCTATGTGGATGGTACGACCACCATGTCCACCAACGAGAGAAAAGCAAGCATCAGGGAATTCTATGCTGTTATTTACCCGTCTCTATTGCAACTTCAGAGAGGTGTTACCGATACCGAAGATAAAAAGCAGAAGGCTGTCTGCATGGAAAGGTATCGAAGAAGAGATGACGACGAACTTATATGGTCTTCAGATATTGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGCAAGGTTGTATTGCCCAACTGCAACCATGCCTTGTGCTTGAAATGTTACCGTGAATGGCAAACACGTTCCCAGTCGTGCCCATTCTGTCGTGACAGTCTTAAGAGAGTAAATTCTGGCGATCTCTGGGTATTTACTGATAACAGGGACATTGTGGACATGGCGACAGTGACTCGAGAGAATCTGCAAAGGCTTTTCAAGTACATAGACAAACTGCCTTTGATTGTTCCAGACTCCCTCTTCGACACCTACGATACTCATCTAAGATAA

Protein sequence

MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKKQKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQTRSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFDTYDTHLR

Homology

[Close]

BLAST of Cp4.1LG19g07300 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 2.9e-94
Identity = 160/231 (69.26%), Postives = 192/231 (83.12%), Query Frame = 0


Query: 6   MRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWTDCHLA 65
           MRKSFKDSLK LEADIQ ANTLASE+P EYDG  +QMR+SYSPAAHLFLFL+QWTDCH A
Sbjct: 1   MRKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFA 60

Query: 66  GALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKKQKAVC 125
           GALGLLRILIYK YVDG TTMS +ERK SIREFY V++PSLLQL  G+TD E++KQK +C
Sbjct: 61  GALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEIC 120

Query: 126 MERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQTRSQSC 185
            +RYR++D  +    S+ID+EREEECGIC+E  +KVVLP CNH++C+ CYR W+ RSQSC
Sbjct: 121 DKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSC 180

Query: 186 PFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPD 237
           PFCR SLKRVNSGDLW++T + +I D+  + +ENL+RL  YIDKLPL+  D
Sbjct: 181 PFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSD 231

[Close]

BLAST of Cp4.1LG19g07300 vs. ExPASy Swiss-Prot
Match: Q13434 (Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens OX=9606 GN=MKRN4P PE=5 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.9e-06
Identity = 30/112 (26.79%), Postives = 52/112 (46.43%), Query Frame = 0


Query: 107 LQLQRGVTDTEDKKQKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKV----- 166
           LQ+   +   +  +    C+E + +    ++ +S  +   +++ CGICME   +      
Sbjct: 276 LQVLHPMDAAQRSQHIQACIEAHEK----DMEFSFAVQRSKDKVCGICMEVVYEKANPNE 335

Query: 167 ----VLPNCNHALCLKCYREWQTRSQ-------SCPFCRDSLKRVNSGDLWV 203
               +L NCNH  CLKC R+W++  +       SCP CR +   V   + WV
Sbjct: 336 HRFGILSNCNHTFCLKCIRKWRSAKEFESRIVKSCPQCRITSNFVIPSEYWV 383

[Close]

BLAST of Cp4.1LG19g07300 vs. ExPASy Swiss-Prot
Match: Q4SRI6 (Probable E3 ubiquitin-protein ligase makorin-1 OS=Tetraodon nigroviridis OX=99883 GN=mkrn1 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.6e-06
Identity = 33/112 (29.46%), Postives = 52/112 (46.43%), Query Frame = 0


Query: 107 LQLQRGVTDTEDKKQKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKV----- 166
           LQ+     +++  +    C+E + +  D E+  S  I   ++  CG+CME   +      
Sbjct: 186 LQVLHPTDNSQRSQHTKACIEAHEK--DMEI--SFAIQRSKDMMCGVCMEVVFEKANPSE 245

Query: 167 ----VLPNCNHALCLKCYREWQTRSQ-------SCPFCRDSLKRVNSGDLWV 203
               +L NCNH  CLKC R+W++  Q       SCP CR +   V   + WV
Sbjct: 246 RRFGILSNCNHCYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWV 293

[Close]

BLAST of Cp4.1LG19g07300 vs. ExPASy Swiss-Prot
Match: Q9TT91 (E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii OX=9315 GN=MKRN1 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 35/112 (31.25%), Postives = 51/112 (45.54%), Query Frame = 0


Query: 107 LQLQRGVTDTEDKKQKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKV----- 166
           LQ+   V   +  +    C+E + +  D EL  S  +   ++  CGICME   +      
Sbjct: 237 LQVLHPVDAAQRSQHIKSCIEAHEK--DMEL--SFAVQRSKDMVCGICMEVVYEKANPSE 296

Query: 167 ----VLPNCNHALCLKCYREWQTRSQ-------SCPFCRDSLKRVNSGDLWV 203
               +L NCNH  CLKC R+W++  Q       SCP CR +   V   + WV
Sbjct: 297 RRFGILSNCNHTYCLKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWV 344

[Close]

BLAST of Cp4.1LG19g07300 vs. ExPASy Swiss-Prot
Match: Q9UHC7 (E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3)

HSP 1 Score: 51.6 bits (122), Expect = 1.5e-05
Identity = 32/94 (34.04%), Postives = 45/94 (47.87%), Query Frame = 0


Query: 125 CMERYRRRDDDELIWSSDIDIEREEECGICMETTSKV---------VLPNCNHALCLKCY 184
           C+E + +  D EL  S  +   ++  CGICME   +          +L NCNH  CLKC 
Sbjct: 259 CIEAHEK--DMEL--SFAVQRSKDMVCGICMEVVYEKANPSERRFGILSNCNHTYCLKCI 318

Query: 185 REWQTRSQ-------SCPFCRDSLKRVNSGDLWV 203
           R+W++  Q       SCP CR +   V   + WV
Sbjct: 319 RKWRSAKQFESKIIKSCPECRITSNFVIPSEYWV 348

[Close]

BLAST of Cp4.1LG19g07300 vs. NCBI nr
Match: XP_023003180.1 (uncharacterized protein LOC111496873 isoform X1 [Cucurbita maxima] >XP_023518773.1 uncharacterized protein LOC111782186 isoform X1 [Cucurbita pepo subsp. pepo] >KAG7026579.1 RING finger protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 508 bits (1307), Expect = 1.38e-181
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60
           MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT
Sbjct: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120

Query: 121 QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180
           QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT
Sbjct: 121 QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD 240
           RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD 240

Query: 241 TYDTHLR 247
           TYDTHLR
Sbjct: 241 TYDTHLR 247

[Close]

BLAST of Cp4.1LG19g07300 vs. NCBI nr
Match: KAG6594610.1 (E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 506 bits (1303), Expect = 5.63e-181
Identity = 246/247 (99.60%), Postives = 246/247 (99.60%), Query Frame = 0


Query: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60
           MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT
Sbjct: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120

Query: 121 QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180
           QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT
Sbjct: 121 QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD 240
           RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDM TVTRENLQRLFKYIDKLPLIVPDSLFD
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMVTVTRENLQRLFKYIDKLPLIVPDSLFD 240

Query: 241 TYDTHLR 247
           TYDTHLR
Sbjct: 241 TYDTHLR 247

[Close]

BLAST of Cp4.1LG19g07300 vs. NCBI nr
Match: XP_022926757.1 (uncharacterized protein LOC111433785 [Cucurbita moschata])

HSP 1 Score: 501 bits (1290), Expect = 5.41e-179
Identity = 244/247 (98.79%), Postives = 245/247 (99.19%), Query Frame = 0


Query: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60
           MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT
Sbjct: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120

Query: 121 QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180
           QKAVCMERYRRRDDDEL WSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT
Sbjct: 121 QKAVCMERYRRRDDDELKWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD 240
           RSQSCPFCRDSLKRVNSGDLWVF DNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFVDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD 240

Query: 241 TYDTHLR 247
           TY+THLR
Sbjct: 241 TYNTHLR 247

[Close]

BLAST of Cp4.1LG19g07300 vs. NCBI nr
Match: XP_008439874.1 (PREDICTED: uncharacterized protein LOC103484529 isoform X2 [Cucumis melo] >KAA0052696.1 RING finger protein 141 [Cucumis melo var. makuwa] >TYK13128.1 RING finger protein 141 [Cucumis melo var. makuwa])

HSP 1 Score: 487 bits (1253), Expect = 2.37e-173
Identity = 237/247 (95.95%), Postives = 241/247 (97.57%), Query Frame = 0


Query: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60
           MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMR+SYSPAAHLFLFLVQWT
Sbjct: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMST+ERKASIREFYAVIYPSLLQLQRGVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120

Query: 121 QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180
           QKAVCMERYRRRDDDE I  SD DIEREEECGICMETTSKVVLPNCNHALCLKCYREW+T
Sbjct: 121 QKAVCMERYRRRDDDECIQRSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD 240
           RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENL+RLFKYIDKLP IVPDSLFD
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYIDKLPTIVPDSLFD 240

Query: 241 TYDTHLR 247
            YDTHLR
Sbjct: 241 AYDTHLR 247

[Close]

BLAST of Cp4.1LG19g07300 vs. NCBI nr
Match: XP_038883362.1 (E3 ubiquitin-protein ligase AIRP2-like isoform X2 [Benincasa hispida])

HSP 1 Score: 486 bits (1250), Expect = 6.79e-173
Identity = 236/247 (95.55%), Postives = 241/247 (97.57%), Query Frame = 0


Query: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60
           MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMR+SYSPAAHLFLFLVQWT
Sbjct: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMST+ERKASIREFYAVIYPSLLQLQ+GVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDKK 120

Query: 121 QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180
           QKAVCMERYRRRDDDE I  SD DIEREEECGICMETTSKVVLPNCNHALCLKCYREW+T
Sbjct: 121 QKAVCMERYRRRDDDECIQHSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD 240
           RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENL+RLFKYIDKLP IVPDSLFD
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYIDKLPAIVPDSLFD 240

Query: 241 TYDTHLR 247
            YDTHLR
Sbjct: 241 AYDTHLR 247

[Close]

BLAST of Cp4.1LG19g07300 vs. ExPASy TrEMBL
Match: A0A6J1KR19 (uncharacterized protein LOC111496873 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496873 PE=4 SV=1)

HSP 1 Score: 508 bits (1307), Expect = 6.69e-182
Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0


Query: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60
           MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT
Sbjct: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120

Query: 121 QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180
           QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT
Sbjct: 121 QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD 240
           RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD 240

Query: 241 TYDTHLR 247
           TYDTHLR
Sbjct: 241 TYDTHLR 247

[Close]

BLAST of Cp4.1LG19g07300 vs. ExPASy TrEMBL
Match: A0A6J1EFA0 (uncharacterized protein LOC111433785 OS=Cucurbita moschata OX=3662 GN=LOC111433785 PE=4 SV=1)

HSP 1 Score: 501 bits (1290), Expect = 2.62e-179
Identity = 244/247 (98.79%), Postives = 245/247 (99.19%), Query Frame = 0


Query: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60
           MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT
Sbjct: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120

Query: 121 QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180
           QKAVCMERYRRRDDDEL WSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT
Sbjct: 121 QKAVCMERYRRRDDDELKWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD 240
           RSQSCPFCRDSLKRVNSGDLWVF DNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFVDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD 240

Query: 241 TYDTHLR 247
           TY+THLR
Sbjct: 241 TYNTHLR 247

[Close]

BLAST of Cp4.1LG19g07300 vs. ExPASy TrEMBL
Match: A0A5D3CPM3 (RING finger protein 141 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007380 PE=4 SV=1)

HSP 1 Score: 487 bits (1253), Expect = 1.15e-173
Identity = 237/247 (95.95%), Postives = 241/247 (97.57%), Query Frame = 0


Query: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60
           MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMR+SYSPAAHLFLFLVQWT
Sbjct: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMST+ERKASIREFYAVIYPSLLQLQRGVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120

Query: 121 QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180
           QKAVCMERYRRRDDDE I  SD DIEREEECGICMETTSKVVLPNCNHALCLKCYREW+T
Sbjct: 121 QKAVCMERYRRRDDDECIQRSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD 240
           RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENL+RLFKYIDKLP IVPDSLFD
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYIDKLPTIVPDSLFD 240

Query: 241 TYDTHLR 247
            YDTHLR
Sbjct: 241 AYDTHLR 247

[Close]

BLAST of Cp4.1LG19g07300 vs. ExPASy TrEMBL
Match: A0A1S3AZR9 (uncharacterized protein LOC103484529 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484529 PE=4 SV=1)

HSP 1 Score: 487 bits (1253), Expect = 1.15e-173
Identity = 237/247 (95.95%), Postives = 241/247 (97.57%), Query Frame = 0


Query: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60
           MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMR+SYSPAAHLFLFLVQWT
Sbjct: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMST+ERKASIREFYAVIYPSLLQLQRGVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120

Query: 121 QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180
           QKAVCMERYRRRDDDE I  SD DIEREEECGICMETTSKVVLPNCNHALCLKCYREW+T
Sbjct: 121 QKAVCMERYRRRDDDECIQRSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD 240
           RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENL+RLFKYIDKLP IVPDSLFD
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYIDKLPTIVPDSLFD 240

Query: 241 TYDTHLR 247
            YDTHLR
Sbjct: 241 AYDTHLR 247

[Close]

BLAST of Cp4.1LG19g07300 vs. ExPASy TrEMBL
Match: A0A0A0KLG2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517250 PE=4 SV=1)

HSP 1 Score: 485 bits (1249), Expect = 4.67e-173
Identity = 236/247 (95.55%), Postives = 241/247 (97.57%), Query Frame = 0


Query: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWT 60
           MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMR+SYSPAAHLFLFLVQWT
Sbjct: 1   MYVSSMRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWT 60

Query: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120
           DCHLAGALGLLRILIYKVYVDGTTTMST+ERKASIREFYAVIYPSLLQLQRGVTDTEDKK
Sbjct: 61  DCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQRGVTDTEDKK 120

Query: 121 QKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQT 180
           QKAVCMERYRRRDD+E I  SD DIEREEECGICMETTSKVVLPNCNHALCLKCYREW+T
Sbjct: 121 QKAVCMERYRRRDDEECIQRSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRT 180

Query: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLFD 240
           RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENL+RLFKYIDKLP IVPDSLFD
Sbjct: 181 RSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLKRLFKYIDKLPTIVPDSLFD 240

Query: 241 TYDTHLR 247
            YDTHLR
Sbjct: 241 AYDTHLR 247

[Close]

BLAST of Cp4.1LG19g07300 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein )

HSP 1 Score: 347.1 bits (889), Expect = 1.2e-95
Identity = 161/241 (66.80%), Postives = 194/241 (80.50%), Query Frame = 0


Query: 9   SFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWTDCHLAGAL 68
           SFKDSLK LEADIQHANT+A ++P E DG  +QMR+SY+PAA   LFLVQWTDCHLAG L
Sbjct: 5   SFKDSLKALEADIQHANTVALDYPREKDGARVQMRLSYTPAAQFLLFLVQWTDCHLAGTL 64

Query: 69  GLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKKQKAVCMER 128
           GLLR+LIY  Y DG TTMS  ERK SI++FYAVI+PSLLQL+RG+TD +D+KQK VC  R
Sbjct: 65  GLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGITDLDDRKQKEVCKIR 124

Query: 129 YRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQTRSQSCPFC 188
           YR +D+ E +  S+IDIEREEECGICME  + VVLPNC H+LC+KCYR+W  RS+SCPFC
Sbjct: 125 YRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYRDWHGRSESCPFC 184

Query: 189 RDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLF--DTYDTHL 248
           RDSLKRVNSGDLW+  +  D V+M T+ REN +RLF YI+KLPL+VPD +F    YD H+
Sbjct: 185 RDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPDQVFASSPYDCHV 244

[Close]

BLAST of Cp4.1LG19g07300 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 346.3 bits (887), Expect = 2.1e-95
Identity = 160/231 (69.26%), Postives = 192/231 (83.12%), Query Frame = 0


Query: 6   MRKSFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWTDCHLA 65
           MRKSFKDSLK LEADIQ ANTLASE+P EYDG  +QMR+SYSPAAHLFLFL+QWTDCH A
Sbjct: 1   MRKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCHFA 60

Query: 66  GALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKKQKAVC 125
           GALGLLRILIYK YVDG TTMS +ERK SIREFY V++PSLLQL  G+TD E++KQK +C
Sbjct: 61  GALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQKEIC 120

Query: 126 MERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQTRSQSC 185
            +RYR++D  +    S+ID+EREEECGIC+E  +KVVLP CNH++C+ CYR W+ RSQSC
Sbjct: 121 DKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARSQSC 180

Query: 186 PFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPD 237
           PFCR SLKRVNSGDLW++T + +I D+  + +ENL+RL  YIDKLPL+  D
Sbjct: 181 PFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSD 231

[Close]

BLAST of Cp4.1LG19g07300 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein )

HSP 1 Score: 345.5 bits (885), Expect = 3.5e-95
Identity = 166/241 (68.88%), Postives = 193/241 (80.08%), Query Frame = 0


Query: 9   SFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWTDCHLAGAL 68
           SFKDSLK LEADIQHANTLA ++P E DG  +QMR+SYSP A  FLFLVQWTDC LAG L
Sbjct: 5   SFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKLAGFL 64

Query: 69  GLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKKQKAVCMER 128
           GLLR+LIY  Y DG TTMS  ERKASIREF AVI PSL QLQRGVTD +D KQK VC  R
Sbjct: 65  GLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSKQKEVCKMR 124

Query: 129 YRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQTRSQSCPFC 188
           YR++D+ E+   S+I+IEREEECGICME  SKVVLPNC H+LC+KCYR+W+ RSQSCPFC
Sbjct: 125 YRKKDESEM---SEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFC 184

Query: 189 RDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLF--DTYDTHL 248
           RDSLKRV+SGDLW+F D  D V++  + REN +RLF YI+KLPL+VPD ++    YD H+
Sbjct: 185 RDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPYDFHV 242

[Close]

BLAST of Cp4.1LG19g07300 vs. TAIR 10
Match: AT3G47160.2 (RING/U-box superfamily protein )

HSP 1 Score: 338.6 bits (867), Expect = 4.3e-93
Identity = 161/253 (63.64%), Postives = 194/253 (76.68%), Query Frame = 0


Query: 9   SFKDSLKVLEADIQHANTLAS------------EFPGEYDGPCLQMRISYSPAAHLFLFL 68
           SFKDSLK LEADIQHANT+ S            ++P E DG  +QMR+SY+PAA   LFL
Sbjct: 5   SFKDSLKALEADIQHANTVLSNELGDEVIFRALDYPREKDGARVQMRLSYTPAAQFLLFL 64

Query: 69  VQWTDCHLAGALGLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDT 128
           VQWTDCHLAG LGLLR+LIY  Y DG TTMS  ERK SI++FYAVI+PSLLQL+RG+TD 
Sbjct: 65  VQWTDCHLAGTLGLLRVLIYMTYADGKTTMSVYERKTSIKDFYAVIFPSLLQLERGITDL 124

Query: 129 EDKKQKAVCMERYRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYR 188
           +D+KQK VC  RYR +D+ E +  S+IDIEREEECGICME  + VVLPNC H+LC+KCYR
Sbjct: 125 DDRKQKEVCKIRYRNKDETEKVKLSEIDIEREEECGICMEMNNMVVLPNCTHSLCIKCYR 184

Query: 189 EWQTRSQSCPFCRDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPD 248
           +W  RS+SCPFCRDSLKRVNSGDLW+  +  D V+M T+ REN +RLF YI+KLPL+VPD
Sbjct: 185 DWHGRSESCPFCRDSLKRVNSGDLWMLMEKSDTVNMYTIERENKKRLFVYIEKLPLVVPD 244

[Close]

BLAST of Cp4.1LG19g07300 vs. TAIR 10
Match: AT5G58787.2 (RING/U-box superfamily protein )

HSP 1 Score: 312.8 bits (800), Expect = 2.5e-85
Identity = 153/241 (63.49%), Postives = 180/241 (74.69%), Query Frame = 0


Query: 9   SFKDSLKVLEADIQHANTLASEFPGEYDGPCLQMRISYSPAAHLFLFLVQWTDCHLAGAL 68
           SFKDSLK LEADIQHANTLA ++P E DG  +QMR+SYSP A  FLFLVQWTDC LAG L
Sbjct: 5   SFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCKLAGFL 64

Query: 69  GLLRILIYKVYVDGTTTMSTNERKASIREFYAVIYPSLLQLQRGVTDTEDKKQKAVCMER 128
           GLLR+LIY  Y DG TTMS  ERKASIREF                D +D KQK VC  R
Sbjct: 65  GLLRVLIYMTYADGKTTMSVYERKASIREF---------------QDIDDSKQKEVCKMR 124

Query: 129 YRRRDDDELIWSSDIDIEREEECGICMETTSKVVLPNCNHALCLKCYREWQTRSQSCPFC 188
           YR++D+ E+   S+I+IEREEECGICME  SKVVLPNC H+LC+KCYR+W+ RSQSCPFC
Sbjct: 125 YRKKDESEM---SEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQSCPFC 184

Query: 189 RDSLKRVNSGDLWVFTDNRDIVDMATVTRENLQRLFKYIDKLPLIVPDSLF--DTYDTHL 248
           RDSLKRV+SGDLW+F D  D V++  + REN +RLF YI+KLPL+VPD ++    YD H+
Sbjct: 185 RDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVYASSPYDFHV 227

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g07300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	2.9e-94	69.26	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]
Q13434	3.9e-06	26.79	Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens OX=9606 GN=MKRN4P...	[more]
Q4SRI6	6.6e-06	29.46	Probable E3 ubiquitin-protein ligase makorin-1 OS=Tetraodon nigroviridis OX=9988...	[more]
Q9TT91	1.1e-05	31.25	E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii OX=9315 GN=MKRN1 PE=2 ...	[more]
Q9UHC7	1.5e-05	34.04	E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3	[more]

BLAST of Cp4.1LG19g07300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023003180.1	1.38e-181	100.00	uncharacterized protein LOC111496873 isoform X1 [Cucurbita maxima] >XP_023518773...	[more]
KAG6594610.1	5.63e-181	99.60	E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022926757.1	5.41e-179	98.79	uncharacterized protein LOC111433785 [Cucurbita moschata]	[more]
XP_008439874.1	2.37e-173	95.95	PREDICTED: uncharacterized protein LOC103484529 isoform X2 [Cucumis melo] >KAA00...	[more]
XP_038883362.1	6.79e-173	95.55	E3 ubiquitin-protein ligase AIRP2-like isoform X2 [Benincasa hispida]	[more]

BLAST of Cp4.1LG19g07300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KR19	6.69e-182	100.00	uncharacterized protein LOC111496873 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EFA0	2.62e-179	98.79	uncharacterized protein LOC111433785 OS=Cucurbita moschata OX=3662 GN=LOC1114337...	[more]
A0A5D3CPM3	1.15e-173	95.95	RING finger protein 141 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3AZR9	1.15e-173	95.95	uncharacterized protein LOC103484529 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KLG2	4.67e-173	95.55	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517250 P...	[more]

BLAST of Cp4.1LG19g07300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47160.1	1.2e-95	66.80	RING/U-box superfamily protein	[more]
AT5G01520.1	2.1e-95	69.26	RING/U-box superfamily protein	[more]
AT5G58787.1	3.5e-95	68.88	RING/U-box superfamily protein	[more]
AT3G47160.2	4.3e-93	63.64	RING/U-box superfamily protein	[more]
AT5G58787.2	2.5e-85	63.49	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 151..188 e-value: 9.8E-7 score: 38.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 151..189 score: 12.504031
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 141..198 e-value: 1.0E-13 score: 52.5
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 148..194 e-value: 6.8E-10 score: 38.6
None	No IPR available	PANTHER	PTHR15315:SF80	PEROXISOME BIOGENESIS FACTOR 10-LIKE	coord: 3..247
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 3..247
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 138..194
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 166..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g07300.1	Cp4.1LG19g07300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity