Cp4.1LG19g06850 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG19g06850
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description60S ribosomal protein L11
LocationCp4.1LG19: 7347079 .. 7349500 (+)
RNA-Seq ExpressionCp4.1LG19g06850
SyntenyCp4.1LG19g06850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGGACAGTTTCGTCAATTTAATGCACAGAGAGACTATTAATAACTTAAAAACCCTAGCAGTCCCTTCCTTGCATCTTTACGTCTCGAGCTTCGTTTACCGCTCGCAACTTCGACTCTGCAAAAATGGTATTCCTCGCTCTTTCGTTTGATTTTTGTTTGCATTGAAGCATCGAATACATTTCTGCGTGTTTAGGTTTCTAATTTAATTTGATGCTACATTACATTTCAGGCTTCAGAGAAGAAGCTATCAAATCCTATGCGGGATATCAAAGTCCAAAAGCTTGTTCTTAACATCTCTGTTGGTGAAAGTGGTGATCGTCTTACCAGAGCCTCTAAGGTTTTCTTTCCGTCTGTGACTTGCTCTCAAGTTTTTTCTGTTTAATTTCCGTAAAAACTCAACAAAGATTCTGTTTTTTCTTTCTGTATTTCAGGTGCTCGAACAACTCAGTGGCCAATCTCCGGTCTTCTCCAAGGGTATAATTGCGTTTACCTTTTAATCACTGTTAAAATTACCGTTTCTATCTTATTTATTCATTATCTGAAATTCGTGGGGATGCCTTTCTGGAATCTTTGTGATTGAAACAGCACGGTACACCGTTCGATCATTTGGGATCCGACGTAACGAAAAGATTGCGTGTTATGTGACCGTGAGGGGCGACAAAGCCATGCAGCTTCTTGAGAGTGGTTTGAAGGTTAAGGAGTATGAGCTGTTGCGCCGGAACTTCAGCGACACTGGCTGCTTTGGTTTTGGAATTCAGGAGCATATTGATCTCGGAATTAAGTGAGTTATCAATCCCTTCTTGTTATTTTTAGCGAATTTTTGCTCCCATTTTGTTATTGCTTATTTATTTCTGTAACTGGTATTGATTGTTGATTATGCTGATATTTATAGACCTTAGACAAATCAGGATTACGATTTACAGTATGTAAGTGCGTTTGTAAAACCTTTGTGAAGTATTGAAGAACAAGAGGGAAAATTCTAGAATTTTAATTTTACTACTCTAATAAATTAGTTCCGTCAATTGGCTAATAATCATACTTTCTTTTGTGACTGGATTTGCTTCATTATCTAACCTATATCAGGATTCAGAAGGCGGGTTATTTAACTTTTGTCCGCACAAAATTTATTGTGATAGACCCAATCCAAGTGACAGACCTGTCATAAGCAAGGCTTTGTACGATGAAATTGGCATTTCTAGTCCCCAAGTAATTGGGTTTTTTTTTTGTTTTTTAAATGCTAAACTCACATTCTTCTAATTTTTGCTACAGGTATGACCCTTCCACGGGTATTTACGGCATGGACTTCTATGTTGTTCTTGAACGTCCAGGTTACCGTGTAGGTCGCCGCCGTAGATGCAAATCAACTGTTGGAATTCAGCATAGAGTCACCAAAGAGGATGCCATGAAGTGGTTCCAAGTCAAATATGAAGGAGTTATTCTCAACAAATCTCAAAATATATCCTAGAAAGGTTCTCTGCTATCTTTGCTGTCATGTTCAAATTTTGGCAATATGTTAACTCATTTAAGATTTGTCCATCAGAACTTCTATTTCTTTTTTATGGAGCGTTCAAGCCTTTCTTATTTTATTGTATTCTCTGTTTCAACTCTTTTTGCCGCGTTGGAAATCAATATTCAATTTTTTTTGGTTTATACAGTGCCAACTGTTTTGTTATAAATTCATGGTAGGTATATAAGCAAATTTTCCAGAACTATCTGGTTTGGTTCAAAGTGTTCCGTTCTCCTGAAGAAAAGAAAATCTCTCGGGAAAAGTTTCCTCCGTATCTCCTAACAATAAGGATTCTCTTATAATATCCTCCTTCCCCAGTAAGATTTTTGTTAGAAAACCTCCCCGCATCTACTTCGGTTGTGTGAGGCCAAAATAGGATTTAAATCTCAGAAGTTCCGTAGTCGTTGGATTTAGACTCCAAATAAGTGCATGTTTGGTTTGGCACGATACATTTTGGGGATGGATGACGTGTTTCATTTCATCTAATTTTTCCAGCTATTGATTTATTGAAAATAAGTGCATGTTTACTTCAGTTTTCATCTAAGTTTGATTTTATTATATATTTTTAATCATCGAGTTAATCAATGAATGTAACATGCCAGATAGTGTTAGCCTAAACTGTGATTGTAGTTTTAAGAATAAGAGGAGACAGAAGGGAAGAAGCAAGAAGAAAGAAATGGAAAACTTGGTTGGGGATTGACAACCTGGGTGTTCTTCATTTCATGGGGTTCATCATTAAACATTTGGGTCCCATCCACACAACGCTTACGCTATTTGAAGCAAAGGGGGTTCCCATAACAACCATTCCATAAACAAAATGGCCCCTCCTTCCAACTCTACATCTATCACTTTTTCTCTCCCCTTGTAATTCCCTACCCATTCCCCTATCTTATCTTTCGATCCATCTTCTCTG

mRNA sequence

AAGGGACAGTTTCGTCAATTTAATGCACAGAGAGACTATTAATAACTTAAAAACCCTAGCAGTCCCTTCCTTGCATCTTTACGTCTCGAGCTTCGTTTACCGCTCGCAACTTCGACTCTGCAAAAATGGCTTCAGAGAAGAAGCTATCAAATCCTATGCGGGATATCAAAGTCCAAAAGCTTGTTCTTAACATCTCTGTTGGTGAAAGTGGTGATCGTCTTACCAGAGCCTCTAAGGTGCTCGAACAACTCAGTGGCCAATCTCCGGTCTTCTCCAAGGCACGGTACACCGTTCGATCATTTGGGATCCGACGTAACGAAAAGATTGCGTGTTATGTGACCGTGAGGGGCGACAAAGCCATGCAGCTTCTTGAGAGTGGTTTGAAGGTTAAGGAGTATGAGCTGTTGCGCCGGAACTTCAGCGACACTGGCTGCTTTGGTTTTGGAATTCAGGAGCATATTGATCTCGGAATTAAGTATGACCCTTCCACGGGTATTTACGGCATGGACTTCTATGTTGTTCTTGAACGTCCAGGTTACCGTGTAGGTCGCCGCCGTAGATGCAAATCAACTGTTGGAATTCAGCATAGAGTCACCAAAGAGGATGCCATGAAGTGGTTCCAAGTCAAATATGAAGGAGTTATTCTCAACAAATCTCAAAATATATCCTAGAAAGATAGTGTTAGCCTAAACTGTGATTGTAGTTTTAAGAATAAGAGGAGACAGAAGGGAAGAAGCAAGAAGAAAGAAATGGAAAACTTGGTTGGGGATTGACAACCTGGGTGTTCTTCATTTCATGGGGTTCATCATTAAACATTTGGGTCCCATCCACACAACGCTTACGCTATTTGAAGCAAAGGGGGTTCCCATAACAACCATTCCATAAACAAAATGGCCCCTCCTTCCAACTCTACATCTATCACTTTTTCTCTCCCCTTGTAATTCCCTACCCATTCCCCTATCTTATCTTTCGATCCATCTTCTCTG

Coding sequence (CDS)

ATGGCTTCAGAGAAGAAGCTATCAAATCCTATGCGGGATATCAAAGTCCAAAAGCTTGTTCTTAACATCTCTGTTGGTGAAAGTGGTGATCGTCTTACCAGAGCCTCTAAGGTGCTCGAACAACTCAGTGGCCAATCTCCGGTCTTCTCCAAGGCACGGTACACCGTTCGATCATTTGGGATCCGACGTAACGAAAAGATTGCGTGTTATGTGACCGTGAGGGGCGACAAAGCCATGCAGCTTCTTGAGAGTGGTTTGAAGGTTAAGGAGTATGAGCTGTTGCGCCGGAACTTCAGCGACACTGGCTGCTTTGGTTTTGGAATTCAGGAGCATATTGATCTCGGAATTAAGTATGACCCTTCCACGGGTATTTACGGCATGGACTTCTATGTTGTTCTTGAACGTCCAGGTTACCGTGTAGGTCGCCGCCGTAGATGCAAATCAACTGTTGGAATTCAGCATAGAGTCACCAAAGAGGATGCCATGAAGTGGTTCCAAGTCAAATATGAAGGAGTTATTCTCAACAAATCTCAAAATATATCCTAG

Protein sequence

MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNIS
Homology
[Close]
BLAST of Cp4.1LG19g06850 vs. ExPASy Swiss-Prot
Match: P42795 (60S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2)

HSP 1 Score: 354.0 bits (907), Expect = 1.0e-96
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 S 182
           +
Sbjct: 181 T 181

[Close]
BLAST of Cp4.1LG19g06850 vs. ExPASy Swiss-Prot
Match: P42794 (60S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2)

HSP 1 Score: 354.0 bits (907), Expect = 1.0e-96
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 S 182
           +
Sbjct: 181 T 181

[Close]
BLAST of Cp4.1LG19g06850 vs. ExPASy Swiss-Prot
Match: P46287 (60S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 1.9e-95
Identity = 172/180 (95.56%), Postives = 178/180 (98.89%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDF+VVLERPGYRVGRRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQ I
Sbjct: 121 STGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 180

[Close]
BLAST of Cp4.1LG19g06850 vs. ExPASy Swiss-Prot
Match: A2YDY2 (60S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 SV=2)

HSP 1 Score: 343.2 bits (879), Expect = 1.8e-93
Identity = 170/178 (95.51%), Postives = 174/178 (97.75%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKK SNPMR+IKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQ 179
           STGIYGMDFYVVLER GYRV RRRRCKS VGIQHRVTKEDAMKWFQVKYEGVILNK+Q
Sbjct: 121 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQ 178

[Close]
BLAST of Cp4.1LG19g06850 vs. ExPASy Swiss-Prot
Match: Q0DK10 (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 1.8e-93
Identity = 170/178 (95.51%), Postives = 174/178 (97.75%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKK SNPMR+IKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQ 179
           STGIYGMDFYVVLER GYRV RRRRCKS VGIQHRVTKEDAMKWFQVKYEGVILNK+Q
Sbjct: 121 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQ 178

[Close]
BLAST of Cp4.1LG19g06850 vs. NCBI nr
Match: XP_022926626.1 (60S ribosomal protein L11-1-like [Cucurbita moschata] >XP_023003612.1 60S ribosomal protein L11-1-like [Cucurbita maxima] >XP_023518618.1 60S ribosomal protein L11-1 [Cucurbita pepo subsp. pepo] >XP_023518619.1 60S ribosomal protein L11-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 363 bits (931), Expect = 1.87e-126
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

[Close]
BLAST of Cp4.1LG19g06850 vs. NCBI nr
Match: XP_004134655.1 (60S ribosomal protein L11-1 [Cucumis sativus] >XP_008439725.1 PREDICTED: 60S ribosomal protein L11-1-like [Cucumis melo] >XP_038881245.1 60S ribosomal protein L11-1-like [Benincasa hispida] >XP_038881246.1 60S ribosomal protein L11-1-like [Benincasa hispida] >KGN49316.1 hypothetical protein Csa_003237 [Cucumis sativus])

HSP 1 Score: 362 bits (928), Expect = 5.37e-126
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

[Close]
BLAST of Cp4.1LG19g06850 vs. NCBI nr
Match: XP_022142341.1 (60S ribosomal protein L11-1-like [Momordica charantia] >XP_023544522.1 60S ribosomal protein L11-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360 bits (924), Expect = 2.19e-125
Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKS+VGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

[Close]
BLAST of Cp4.1LG19g06850 vs. NCBI nr
Match: XP_022926136.1 (60S ribosomal protein L11-1 [Cucurbita moschata] >XP_022978768.1 60S ribosomal protein L11-1 [Cucurbita maxima] >KAG6581365.1 60S ribosomal protein L11-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 358 bits (920), Expect = 8.92e-125
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKS+VGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

[Close]
BLAST of Cp4.1LG19g06850 vs. NCBI nr
Match: KAA0052611.1 (Ribosomal protein L5 [Cucumis melo var. makuwa])

HSP 1 Score: 360 bits (925), Expect = 1.12e-124
Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           +ASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 57  LASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 116

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 117 IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 176

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 177 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 236

[Close]
BLAST of Cp4.1LG19g06850 vs. ExPASy TrEMBL
Match: A0A6J1KN27 (60S ribosomal protein L11-1-like OS=Cucurbita maxima OX=3661 GN=LOC111497161 PE=3 SV=1)

HSP 1 Score: 363 bits (931), Expect = 9.07e-127
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

[Close]
BLAST of Cp4.1LG19g06850 vs. ExPASy TrEMBL
Match: A0A6J1EFE9 (60S ribosomal protein L11-1-like OS=Cucurbita moschata OX=3662 GN=LOC111433702 PE=3 SV=1)

HSP 1 Score: 363 bits (931), Expect = 9.07e-127
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

[Close]
BLAST of Cp4.1LG19g06850 vs. ExPASy TrEMBL
Match: A0A0A0KNL5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519680 PE=3 SV=1)

HSP 1 Score: 362 bits (928), Expect = 2.60e-126
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

[Close]
BLAST of Cp4.1LG19g06850 vs. ExPASy TrEMBL
Match: A0A1S3AZF9 (60S ribosomal protein L11-1-like OS=Cucumis melo OX=3656 GN=LOC103484439 PE=3 SV=1)

HSP 1 Score: 362 bits (928), Expect = 2.60e-126
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

[Close]
BLAST of Cp4.1LG19g06850 vs. ExPASy TrEMBL
Match: A0A6J1CLW8 (60S ribosomal protein L11-1-like OS=Momordica charantia OX=3673 GN=LOC111012483 PE=3 SV=1)

HSP 1 Score: 360 bits (924), Expect = 1.06e-125
Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQSPVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQSPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRVGRRRRCKS+VGIQHRVTKEDAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSSVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180

[Close]
BLAST of Cp4.1LG19g06850 vs. TAIR 10
Match: AT2G42740.1 (ribosomal protein large subunit 16A )

HSP 1 Score: 354.0 bits (907), Expect = 7.2e-98
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 S 182
           +
Sbjct: 181 T 181

[Close]
BLAST of Cp4.1LG19g06850 vs. TAIR 10
Match: AT3G58700.1 (Ribosomal L5P family protein )

HSP 1 Score: 354.0 bits (907), Expect = 7.2e-98
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 S 182
           +
Sbjct: 181 T 181

[Close]
BLAST of Cp4.1LG19g06850 vs. TAIR 10
Match: AT4G18730.1 (ribosomal protein L16B )

HSP 1 Score: 354.0 bits (907), Expect = 7.2e-98
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 S 182
           +
Sbjct: 181 T 181

[Close]
BLAST of Cp4.1LG19g06850 vs. TAIR 10
Match: AT5G45775.2 (Ribosomal L5P family protein )

HSP 1 Score: 354.0 bits (907), Expect = 7.2e-98
Identity = 174/181 (96.13%), Postives = 179/181 (98.90%), Query Frame = 0 

Query: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60
           MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQ+PVFSKARYTVRSFG
Sbjct: 1   MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60

Query: 61  IRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120
           IRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP
Sbjct: 61  IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120

Query: 121 STGIYGMDFYVVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNI 180
           STGIYGMDFYVVLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI
Sbjct: 121 STGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180

Query: 181 S 182
           +
Sbjct: 181 T 181

[Close]
BLAST of Cp4.1LG19g06850 vs. TAIR 10
Match: AT5G45775.1 (Ribosomal L5P family protein )

HSP 1 Score: 335.1 bits (858), Expect = 3.5e-92
Identity = 164/171 (95.91%), Postives = 169/171 (98.83%), Query Frame = 0 

Query: 11  MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACY 70
           MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACY
Sbjct: 1   MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY 60

Query: 71  VTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFY 130
           VTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFY
Sbjct: 61  VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFY 120

Query: 131 VVLERPGYRVGRRRRCKSTVGIQHRVTKEDAMKWFQVKYEGVILNKSQNIS 182
           VVLERPGYRV RRRRCK+ VGIQHRVTK+DAMKWFQVKYEGVILNKSQNI+
Sbjct: 121 VVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNIT 171

The following BLAST results are available for this feature:
BLAST of Cp4.1LG19g06850 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P427951.0e-9696.1360S ribosomal protein L11-1 OS=Arabidopsis thaliana OX=3702 GN=RPL11A PE=2 SV=2[more]
P427941.0e-9696.1360S ribosomal protein L11-2 OS=Arabidopsis thaliana OX=3702 GN=RPL11B PE=2 SV=2[more]
P462871.9e-9595.5660S ribosomal protein L11 OS=Medicago sativa OX=3879 GN=RPL11 PE=2 SV=1[more]
A2YDY21.8e-9395.5160S ribosomal protein L11 OS=Oryza sativa subsp. indica OX=39946 GN=RPL11 PE=2 S... [more]
Q0DK101.8e-9395.5160S ribosomal protein L11 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL11 PE=2... [more]
BLAST of Cp4.1LG19g06850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022926626.11.87e-126100.0060S ribosomal protein L11-1-like [Cucurbita moschata] >XP_023003612.1 60S riboso... [more]
XP_004134655.15.37e-12699.4560S ribosomal protein L11-1 [Cucumis sativus] >XP_008439725.1 PREDICTED: 60S rib... [more]
XP_022142341.12.19e-12598.9060S ribosomal protein L11-1-like [Momordica charantia] >XP_023544522.1 60S ribos... [more]
XP_022926136.18.92e-12598.3460S ribosomal protein L11-1 [Cucurbita moschata] >XP_022978768.1 60S ribosomal p... [more]
KAA0052611.11.12e-12498.90Ribosomal protein L5 [Cucumis melo var. makuwa][more]
BLAST of Cp4.1LG19g06850 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KN279.07e-127100.0060S ribosomal protein L11-1-like OS=Cucurbita maxima OX=3661 GN=LOC111497161 PE=... [more]
A0A6J1EFE99.07e-127100.0060S ribosomal protein L11-1-like OS=Cucurbita moschata OX=3662 GN=LOC111433702 P... [more]
A0A0A0KNL52.60e-12699.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G519680 PE=3 SV=1[more]
A0A1S3AZF92.60e-12699.4560S ribosomal protein L11-1-like OS=Cucumis melo OX=3656 GN=LOC103484439 PE=3 SV... [more]
A0A6J1CLW81.06e-12598.9060S ribosomal protein L11-1-like OS=Momordica charantia OX=3673 GN=LOC111012483 ... [more]
BLAST of Cp4.1LG19g06850 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G42740.17.2e-9896.13ribosomal protein large subunit 16A [more]
AT3G58700.17.2e-9896.13Ribosomal L5P family protein [more]
AT4G18730.17.2e-9896.13ribosomal protein L16B [more]
AT5G45775.27.2e-9896.13Ribosomal L5P family protein [more]
AT5G45775.13.5e-9295.91Ribosomal L5P family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022803Ribosomal protein L5 domain superfamilyGENE3D3.30.1440.10coord: 2..177
e-value: 2.0E-72
score: 244.5
IPR022803Ribosomal protein L5 domain superfamilySUPERFAMILY55282RL5-likecoord: 8..173
IPR031309Ribosomal protein L5, C-terminalPFAMPF00673Ribosomal_L5_Ccoord: 66..164
e-value: 7.8E-21
score: 74.1
IPR002132Ribosomal protein L5PIRSFPIRSF002161RPL5p_RPL5a_RPL11e_RPL5ocoord: 1..172
e-value: 2.4E-42
score: 142.4
IPR002132Ribosomal protein L5PANTHERPTHR1199460S RIBOSOMAL PROTEIN L11-RELATEDcoord: 1..180
IPR031310Ribosomal protein L5, N-terminalPFAMPF00281Ribosomal_L5coord: 9..62
e-value: 3.1E-20
score: 72.2
NoneNo IPR availablePANTHERPTHR11994:SF3160S RIBOSOMAL PROTEIN L11-1coord: 1..180
IPR020929Ribosomal protein L5, conserved sitePROSITEPS00358RIBOSOMAL_L5coord: 39..55

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g06850.1Cp4.1LG19g06850.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome