Cp4.1LG19g05480 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG19g05480
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionCoatomer subunit epsilon
LocationCp4.1LG19: 7973977 .. 7977324 (-)
RNA-Seq ExpressionCp4.1LG19g05480
SyntenyCp4.1LG19g05480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTCATTTATTATTTTTTTCTTTTTATTTTGTTTATTTTTTACTCGTTGATTTTCCCAAATTTGTTCAATTGCTTAGTCGGTCTTCTCTCTGTATCCCTCAAGGCTGCTAGATTCAGATCTAGAAGGAGCTTGGACGAAGAAGGAAGAGTGAAAGCATGGCAGCACCGGATCATTTGTTCAATCTCAGAAATCATTTCTATTTGGGAGCGTATCAGGCCGCCATTAACAACAGTAATCTCCCCAATCTCTCCCCCGATGATGCAATTGAGAGGGATTCCATTGTTTACCGCTCTTACATTGCCCTTGGCAGCTATCAGGTCTGTTCGTGCACATTAGTGTGGTTGTAAAGTATATTGGTGATTGCTTTTAACTTGATTTGATACTCTGTGCGTACTCTTTCAGCTAGTGGTTAGCGAGATCGACTCATCCGCCCCTACGCCTCTCCAAGCCGTCAAATTGCTCGCTCTGTATCTGTCTGATCCCAGCAGCAAGGTTTCATTCGTGGATCTATATCCTTTTTAGCTGATTATGTTCGTTTGGAATATAAATTCTTTCAGGAATTCATAGAATTTCAATTATAATTTTGGGTCACACATTTCTATGCCGTGTTACTTCATTCTATAAATTTAAACCATATTTGACATTGATCTGGGGTGACATGCTAAAAGTCTCAAGAAGCGTTTACTGGGAATTCAATGTTGGTGACTCCATTTTATTGGCTAGTGACGTTTGGTGCCTTTTCTTTTGGGGGGTGTGGATGAATGAGGATAGGGAGCCAATTCATATTGTGGCAGTGAACGGAGTTTTTAGCGTTTCATAATAAAAATTCCTGCATAATTGGATCGATATTAAAAGTCATCTAACGTGTGAATATGTTAAGCAGTTCAAACCAACTTAAAAGATTTCAGATTTGACACCTAGTATTGAACGATAAATCACTTTCAAAAAGGAATGAATCCGGTTTCTTATTCACAAGAGCAGTGTCATTGAAGTTTCTTTACTGATTAATTAATTGAACATTGTAGGAATCTACCATTGCAAGCCTACATGAATGGTTATCAGATCCAGCCATTGGAAACAATCCTACTTTGAGGCTAATTGCAGGAATCATATTCATGCACGAGCAAGATTATAATGAAGCCCTGAAACACACAAATGCTGGAGGAACCATGGAATTGTAAGTCTCAGTTTGAATGCTTTTCCAGTAAGATAACAAGACCTAGCAATCCAAAAGTTAATTGTCCAAGCATGTCACATCTACATTTAATTAATGATATCAATGATGGAAATTTATTAGAATCAAAACTGAAATTAAGGAGAGTGTAATTGAAACTGAAGTTTCATGAATGAAAGAGACAATTTGTAATTTAACTTTTCTGTTTCTCACTGCGTGTTTTATCATCTTAAGTGCCTAATGTAGATTCAAATAGTTGATTTAGGGGAGATATTTGTGAGACTGGACGTGTATAATGTGATTGGCTCAATGAAACCATGAGAGCTTTTGCTCAAAGTGGACAATATCATACCATTCGTGGAGGGTCGTGATTCCTAACAACTAATAATAATGTAATTGGCTCAAGCCTGATTTTGTTTTTTTCCTTGCAGGCATGCTTTGAATGTTCAAATATTTCTTAAGATGCACAGGTCAGATTATGCAGAGAGACAGCTGAGAGTCATGCAACAGACTGATGAGGATCACACATTAACACAACTTGCAAATGCTTGGTTAAATCTGGCAGTGGTTTGTAGCTTATAGCATTTTTTTCCTTTACACTGAACGAAGGGACACTAGACTTTTGAAGGTAATCTTATTATTCTGTAATTTTTTTTACTTGACCAGGGTGGTTCCAAAATACAGGAAGCATATCTCATCTTCCAAGATTTCTCTGAAAAGTATTCCATGACAAGCTTGATTTTGAATGGAAGGGCCGTCTGCTGCATGCATATGGGAAACTTTGATGAAGCAGAGACACTTCTTCTTGAAGCATTGAACAAGGTAATTTTTTAATCACCGTGCACTTGATTACTTATATTGTATAACAGAAACTGCTTTTCTGAGGGGATCAAGATTAAATTGGCACAACGAAAGACTAAGCCAGAAAAAAAAAATCCCTACACTGAACATCTTTTGTAACATAGTTTTCTTCAATGAATTCCAAGATGATCAAACTTAAGGCAGATTGAAAGTTTTCAGGACAACGAAGGATGCAAATATTTTCTATAAATTTCTAATTGTAGATAAGAAGTTGCTTTCATGTTCTCCACAGGATGCAAAAGACCCAGAAACTCTGGCCAATCTAGTTGTATGCAGTCTTCACCTTGGCAAACCAACTTCTCGTTTTCTCAGGTAATGGATAGTGATCCATGGCCAGAAATCTTTTCTGCTAATATTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGTTGTTGGGTTGCAATGCTGTTCTGTAGTCTGCATCTTTGTGGGAATTGGGGGTTGAGGGTAGTTTTAAGAAAGTGATGGTATTTCTATGATCTCTTAAATTATAGACAGTTTAAAGTGAGGTTGGAATGACTTTCTGAGAGTAGTATTTTAAAGTAAAACATTTCTTTTTGACACTTTAGAAGGGGCTTTAATGAGGAGTTTGATATTTTAGATTCCTATATGGTACCGTAGGTCTTGTTATGCTCATTTAACATCTTTGGTTTTGAGAAATTTATTTTGTCCTTGTCCTGACTCCTGTCTTCACATTATGCTTTCCTGGAAATAAGTTGTGTTTTTATTTTAAGCTATTATGGAGAATTTGCCTGTTGATAAAAACTACCTGAACAGTTGAATTCATCCACAAGTTGGATTAGAATTTTTCTTTCTTACCATGGCTGCTAACATACTTGCCACAAATTTTCAGCCAATTGAAACTTTCGCATCCAGACCACTTGCTTGTTAAACGCATCTCGGCTGCTGAAGAGAACTTTGATAGAGCTGTCCAGTCTGTTGTTTAGTGAGCCCTTGCTGCTTTTGAAAAGGAGATGAACAATGTTTGCTAGTGTTAAACGGCAGTCTTCACCCCGCGGCCATTTACTGTTTATTGGGGCTGTTGATTTTGCTCAAATTATTCGGCTATTAAATACCAAATCGAACAAAATGTTTGACAGTAGAAGTTATAAAGCTTGATTCTGGTCATTTTGTATTGAGCTCATAGATGTGATACATGATTATTTGACTTTAGCATTTTCATTTGTCCTTGGGTTGGAATGAGTGTAAACGACTGCCCTCTAAGGTTCATTGTTTGATATTGTGCCAAATTGCAAGAGAGTACAAATAGAGAAACAGAAGTTGCA

mRNA sequence

TTTTCATTTATTATTTTTTTCTTTTTATTTTGTTTATTTTTTACTCGTTGATTTTCCCAAATTTGTTCAATTGCTTAGTCGGTCTTCTCTCTGTATCCCTCAAGGCTGCTAGATTCAGATCTAGAAGGAGCTTGGACGAAGAAGGAAGAGTGAAAGCATGGCAGCACCGGATCATTTGTTCAATCTCAGAAATCATTTCTATTTGGGAGCGTATCAGGCCGCCATTAACAACAGTAATCTCCCCAATCTCTCCCCCGATGATGCAATTGAGAGGGATTCCATTGTTTACCGCTCTTACATTGCCCTTGGCAGCTATCAGCTAGTGGTTAGCGAGATCGACTCATCCGCCCCTACGCCTCTCCAAGCCGTCAAATTGCTCGCTCTGTATCTGTCTGATCCCAGCAGCAAGGAATCTACCATTGCAAGCCTACATGAATGGTTATCAGATCCAGCCATTGGAAACAATCCTACTTTGAGGCTAATTGCAGGAATCATATTCATGCACGAGCAAGATTATAATGAAGCCCTGAAACACACAAATGCTGGAGGAACCATGGAATTGTCAGATTATGCAGAGAGACAGCTGAGAGTCATGCAACAGACTGATGAGGATCACACATTAACACAACTTGCAAATGCTTGGTTAAATCTGGCAGTGGGTGGTTCCAAAATACAGGAAGCATATCTCATCTTCCAAGATTTCTCTGAAAAGTATTCCATGACAAGCTTGATTTTGAATGGAAGGGCCGTCTGCTGCATGCATATGGGAAACTTTGATGAAGCAGAGACACTTCTTCTTGAAGCATTGAACAAGGATGCAAAAGACCCAGAAACTCTGGCCAATCTAGTTGTATGCAGTCTTCACCTTGGCAAACCAACTTCTCGTTTTCTCAGCCAATTGAAACTTTCGCATCCAGACCACTTGCTTGTTAAACGCATCTCGGCTGCTGAAGAGAACTTTGATAGAGCTGTCCAGTCTGTTGTTTAGTGAGCCCTTGCTGCTTTTGAAAAGGAGATGAACAATGTTTGCTAGTGTTAAACGGCAGTCTTCACCCCGCGGCCATTTACTGTTTATTGGGGCTGTTGATTTTGCTCAAATTATTCGGCTATTAAATACCAAATCGAACAAAATGTTTGACAGTAGAAGTTATAAAGCTTGATTCTGGTCATTTTGTATTGAGCTCATAGATGTGATACATGATTATTTGACTTTAGCATTTTCATTTGTCCTTGGGTTGGAATGAGTGTAAACGACTGCCCTCTAAGGTTCATTGTTTGATATTGTGCCAAATTGCAAGAGAGTACAAATAGAGAAACAGAAGTTGCA

Coding sequence (CDS)

ATGGCAGCACCGGATCATTTGTTCAATCTCAGAAATCATTTCTATTTGGGAGCGTATCAGGCCGCCATTAACAACAGTAATCTCCCCAATCTCTCCCCCGATGATGCAATTGAGAGGGATTCCATTGTTTACCGCTCTTACATTGCCCTTGGCAGCTATCAGCTAGTGGTTAGCGAGATCGACTCATCCGCCCCTACGCCTCTCCAAGCCGTCAAATTGCTCGCTCTGTATCTGTCTGATCCCAGCAGCAAGGAATCTACCATTGCAAGCCTACATGAATGGTTATCAGATCCAGCCATTGGAAACAATCCTACTTTGAGGCTAATTGCAGGAATCATATTCATGCACGAGCAAGATTATAATGAAGCCCTGAAACACACAAATGCTGGAGGAACCATGGAATTGTCAGATTATGCAGAGAGACAGCTGAGAGTCATGCAACAGACTGATGAGGATCACACATTAACACAACTTGCAAATGCTTGGTTAAATCTGGCAGTGGGTGGTTCCAAAATACAGGAAGCATATCTCATCTTCCAAGATTTCTCTGAAAAGTATTCCATGACAAGCTTGATTTTGAATGGAAGGGCCGTCTGCTGCATGCATATGGGAAACTTTGATGAAGCAGAGACACTTCTTCTTGAAGCATTGAACAAGGATGCAAAAGACCCAGAAACTCTGGCCAATCTAGTTGTATGCAGTCTTCACCTTGGCAAACCAACTTCTCGTTTTCTCAGCCAATTGAAACTTTCGCATCCAGACCACTTGCTTGTTAAACGCATCTCGGCTGCTGAAGAGAACTTTGATAGAGCTGTCCAGTCTGTTGTTTAG

Protein sequence

MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEIDSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDYNEALKHTNAGGTMELSDYAERQLRVMQQTDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV
Homology
[Close]
BLAST of Cp4.1LG19g05480 vs. ExPASy Swiss-Prot
Match: Q9SA78 (Coatomer subunit epsilon-1 OS=Arabidopsis thaliana OX=3702 GN=At1g30630 PE=2 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 2.9e-127
Identity = 222/287 (77.35%), Postives = 256/287 (89.20%), Query Frame = 0 

Query: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60
           MA PDHLFNLRNHFYLGAYQAAINNS +PNLS +D +ERD +V+R+YIALGSYQLV+SEI
Sbjct: 4   MAGPDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEI 63

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120
           D +A TPLQAVKLLA+YLS P +KESTI+SL EWL+DP +GNN  +RLIAG IFMHE+DY
Sbjct: 64  DEAAATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDY 123

Query: 121 NEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180
           NEALKHT++GGTM+L             SD+AE+QLRVMQQ DEDHTLTQLA+AWLNLAV
Sbjct: 124 NEALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAV 183

Query: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKY MTSLILNG+AVCCMHMGNF+EAETLLLEALNKDAKDPETL
Sbjct: 184 GGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETL 243

Query: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQS 275
           ANLVVCSLH+GK +SR+L+QLKLSHP+H+LVKR ++AE+NF+RA+QS
Sbjct: 244 ANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQS 290

[Close]
BLAST of Cp4.1LG19g05480 vs. ExPASy Swiss-Prot
Match: O64748 (Coatomer subunit epsilon-2 OS=Arabidopsis thaliana OX=3702 GN=At2g34840 PE=2 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 9.3e-126
Identity = 224/287 (78.05%), Postives = 253/287 (88.15%), Query Frame = 0 

Query: 2   AAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEID 61
           A PDHLFNLRN+FYLGAYQ AINNS + NLSP++A+ERD +V+RSYIALGSYQLV+SEID
Sbjct: 6   AGPDHLFNLRNNFYLGAYQTAINNSEIANLSPENAVERDCLVFRSYIALGSYQLVISEID 65

Query: 62  SSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDYN 121
            SA TPLQAVKLLA+YLS P +KESTI+SL EWL+D  IGNN TLRLIAGIIFMHE+DYN
Sbjct: 66  ESAATPLQAVKLLAMYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEEDYN 125

Query: 122 EALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAVG 181
           E LKHT+AGGTM+L             ++YAE+QLRVMQQ DEDHTLTQLA+AWLNLAVG
Sbjct: 126 ETLKHTHAGGTMDLYALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASAWLNLAVG 185

Query: 182 GSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETLA 241
           GSKIQEAYLIF+DFSEKY MT LILNG+AVCCM MGNFDEAETLLLEALNKDAKDPETLA
Sbjct: 186 GSKIQEAYLIFEDFSEKYPMTCLILNGKAVCCMQMGNFDEAETLLLEALNKDAKDPETLA 245

Query: 242 NLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 276
           NLVVCSLH+GK +SR LSQLKLSHP+H+LVKR+S+AE+NF+RAVQ V
Sbjct: 246 NLVVCSLHVGKSSSRHLSQLKLSHPEHILVKRVSSAEDNFERAVQLV 292

[Close]
BLAST of Cp4.1LG19g05480 vs. ExPASy Swiss-Prot
Match: Q9MAX6 (Coatomer subunit epsilon-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPE1 PE=2 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 6.9e-121
Identity = 217/288 (75.35%), Postives = 251/288 (87.15%), Query Frame = 0 

Query: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60
           MA+PD LFNLRN FYLGAYQAAINNS++P L  D A ERD+IV+RSY+ALGSYQLV+SEI
Sbjct: 1   MASPDLLFNLRNLFYLGAYQAAINNSDVPGLDADAAAERDAIVFRSYVALGSYQLVISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120
           DSSA T LQAVKLLALYLS    KES I SL EWLSD A+G+NP LRLIAGIIFMHEQDY
Sbjct: 61  DSSAATSLQAVKLLALYLS--GDKESAIVSLKEWLSDSAVGSNPVLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180
            EALKHT++GGT++L             SDYAE+QL++MQQ DEDHTLTQLANAWL++AV
Sbjct: 121 TEALKHTHSGGTLDLHALNVQIFIKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLDIAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKI+EAYLIFQDF+EKY MT ++LNG+AVCCMHMG+FDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIREAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 276
           ANL+VC+LHLGKP+SR+LSQLKLSHPDH+LVKR  +AE+NF+RA+Q+V
Sbjct: 241 ANLIVCNLHLGKPSSRYLSQLKLSHPDHVLVKRAVSAEDNFERALQAV 286

[Close]
BLAST of Cp4.1LG19g05480 vs. ExPASy Swiss-Prot
Match: P0C541 (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0644700 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 3.6e-101
Identity = 189/292 (64.73%), Postives = 229/292 (78.42%), Query Frame = 0 

Query: 2   AAPDHLFNLRNHFYLGAYQAAINNSNL----PNLSPDDAIERDSIVYRSYIALGSYQLVV 61
           A+PDHLF LRN FY+GAYQA I           LSPD   ERDS++YRSYIA+GS+QLV+
Sbjct: 5   ASPDHLFGLRNSFYVGAYQAVITGVQAIPARAALSPDALAERDSLLYRSYIAIGSHQLVI 64

Query: 62  SEIDSSAPTPLQAVKLLALYLS-DPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMH 121
            EI   A TPLQAV+LL +YLS     KES I  L+E L+D A+G+NP LRL+AG + MH
Sbjct: 65  DEIGPGAATPLQAVRLLTVYLSGGAGGKESAIRKLNELLADDAVGSNPILRLVAGTVLMH 124

Query: 122 EQDYNEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWL 181
           E+DY  ALKHTN+GGTMEL             SD+AE+QLR+MQQ DEDHTLTQLANAW+
Sbjct: 125 ERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWV 184

Query: 182 NLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKD 241
           +L +GGSKIQEA+LIFQD SEKY  T LILNG+A+C MHMGNF++AE LLLE+LNKDAKD
Sbjct: 185 DLVMGGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNFEDAEGLLLESLNKDAKD 244

Query: 242 PETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 276
            ETLANLVVCSL+LGK  SR+L+QLKL+HPDH+LVKR+S+AE++FDRA Q++
Sbjct: 245 AETLANLVVCSLNLGKSASRYLNQLKLAHPDHMLVKRMSSAEDSFDRACQAI 296

[Close]
BLAST of Cp4.1LG19g05480 vs. ExPASy Swiss-Prot
Match: A2XY73 (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. indica OX=39946 GN=H0413E07.10 PE=3 SV=2)

HSP 1 Score: 367.9 bits (943), Expect = 1.0e-100
Identity = 189/292 (64.73%), Postives = 229/292 (78.42%), Query Frame = 0 

Query: 2   AAPDHLFNLRNHFYLGAYQAAINNSNL----PNLSPDDAIERDSIVYRSYIALGSYQLVV 61
           A+PDHLF LR  FY+GAYQA I           LSPD   ERDS++YRSYIA+GS+QLV+
Sbjct: 5   ASPDHLFGLRYSFYVGAYQAVITGVQAIPARAALSPDALAERDSLLYRSYIAIGSHQLVI 64

Query: 62  SEIDSSAPTPLQAVKLLALYLS-DPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMH 121
            EI   A TPLQAV+LLA+YLS     KES I  L+E L+D A+G+NP LRL+AG + MH
Sbjct: 65  DEIGPGAATPLQAVRLLAVYLSGGAGGKESAIRKLNELLADDAVGSNPILRLVAGTVLMH 124

Query: 122 EQDYNEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWL 181
           E+DY  ALKHTN+GGTMEL             SD+AE+QLR+MQQ DEDHTLTQLANAW+
Sbjct: 125 ERDYAGALKHTNSGGTMELLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWV 184

Query: 182 NLAVGGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKD 241
           +L +GGSKIQEA+LIFQD SEKY  T LILNG+A+C MHMGNF++AE LLLE+LNKDAKD
Sbjct: 185 DLVMGGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNFEDAEGLLLESLNKDAKD 244

Query: 242 PETLANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 276
            ETLANLVVCSL+LGK  SR+L+QLKL+HPDH+LVKR+S+AE++FDRA Q++
Sbjct: 245 AETLANLVVCSLNLGKSASRYLNQLKLAHPDHMLVKRMSSAEDSFDRACQAI 296

[Close]
BLAST of Cp4.1LG19g05480 vs. NCBI nr
Match: XP_022926620.1 (coatomer subunit epsilon-1-like [Cucurbita moschata] >XP_023517735.1 coatomer subunit epsilon-1-like [Cucurbita pepo subsp. pepo] >KAG6594404.1 Coatomer subunit epsilon-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 537 bits (1383), Expect = 5.45e-192
Identity = 276/289 (95.50%), Postives = 276/289 (95.50%), Query Frame = 0 

Query: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60
           MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI
Sbjct: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMEL             SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV 276
           ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV
Sbjct: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV 289

[Close]
BLAST of Cp4.1LG19g05480 vs. NCBI nr
Match: XP_023003039.1 (coatomer subunit epsilon-1-like [Cucurbita maxima])

HSP 1 Score: 535 bits (1378), Expect = 3.15e-191
Identity = 275/289 (95.16%), Postives = 275/289 (95.16%), Query Frame = 0 

Query: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60
           MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI
Sbjct: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMEL             SDYAERQLRVMQQTDEDHTL QLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLAQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV 276
           ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV
Sbjct: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV 289

[Close]
BLAST of Cp4.1LG19g05480 vs. NCBI nr
Match: XP_008439506.1 (PREDICTED: coatomer subunit epsilon-1-like [Cucumis melo])

HSP 1 Score: 515 bits (1327), Expect = 1.87e-183
Identity = 263/288 (91.32%), Postives = 270/288 (93.75%), Query Frame = 0 

Query: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60
           MAAPDHLFNLRN+FYLGAYQAAINNS+LPNLSPDDAIERDSIV+RSYIALGSYQL +SEI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDAIERDSIVFRSYIALGSYQLAISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPS+KESTIASL EWLSDPAIGNNPTLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSNKESTIASLQEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMEL             SDYAERQLRVMQQ DEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKY MTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 275
           ANLVVC+LHLGKPTSRFLSQLKLSHPDH+LVKRIS AEENFDRAVQSV
Sbjct: 241 ANLVVCNLHLGKPTSRFLSQLKLSHPDHMLVKRISTAEENFDRAVQSV 288

[Close]
BLAST of Cp4.1LG19g05480 vs. NCBI nr
Match: XP_038883808.1 (coatomer subunit epsilon-1-like [Benincasa hispida])

HSP 1 Score: 514 bits (1324), Expect = 5.36e-183
Identity = 264/288 (91.67%), Postives = 270/288 (93.75%), Query Frame = 0 

Query: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60
           MAAPDHLFNLRN+FYLGAYQAAINNS+LPNLSPDDAIERDSIV+RSYIALGSYQL +SEI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDAIERDSIVFRSYIALGSYQLAISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPSSKESTIASL EWLSDPAIGN+P LRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNSPILRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMEL             SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKY MTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 275
           ANLVVCSLHLGKPTSRFLSQLKLSHPDH+LVK ISAAEENFDRAVQSV
Sbjct: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHMLVKCISAAEENFDRAVQSV 288

[Close]
BLAST of Cp4.1LG19g05480 vs. NCBI nr
Match: KAA0052455.1 (coatomer subunit epsilon-1-like [Cucumis melo var. makuwa] >TYK13367.1 coatomer subunit epsilon-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 514 bits (1323), Expect = 7.61e-183
Identity = 262/288 (90.97%), Postives = 269/288 (93.40%), Query Frame = 0 

Query: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60
           MAAPDHLFNLRN+FYLGAYQAAINNS+LPNLSPDDAIERDSIV+RSYIALGSYQL +SEI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDAIERDSIVFRSYIALGSYQLAISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDP +KESTIASL EWLSDPAIGNNPTLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPGNKESTIASLQEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMEL             SDYAERQLRVMQQ DEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKY MTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 275
           ANLVVC+LHLGKPTSRFLSQLKLSHPDH+LVKRIS AEENFDRAVQSV
Sbjct: 241 ANLVVCNLHLGKPTSRFLSQLKLSHPDHMLVKRISTAEENFDRAVQSV 288

[Close]
BLAST of Cp4.1LG19g05480 vs. ExPASy TrEMBL
Match: A0A6J1ELM6 (Coatomer subunit epsilon OS=Cucurbita moschata OX=3662 GN=LOC111433698 PE=3 SV=1)

HSP 1 Score: 537 bits (1383), Expect = 2.64e-192
Identity = 276/289 (95.50%), Postives = 276/289 (95.50%), Query Frame = 0 

Query: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60
           MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI
Sbjct: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMEL             SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV 276
           ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV
Sbjct: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV 289

[Close]
BLAST of Cp4.1LG19g05480 vs. ExPASy TrEMBL
Match: A0A6J1KS67 (Coatomer subunit epsilon OS=Cucurbita maxima OX=3661 GN=LOC111496767 PE=3 SV=1)

HSP 1 Score: 535 bits (1378), Expect = 1.53e-191
Identity = 275/289 (95.16%), Postives = 275/289 (95.16%), Query Frame = 0 

Query: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60
           MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI
Sbjct: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMEL             SDYAERQLRVMQQTDEDHTL QLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQTDEDHTLAQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV 276
           ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV
Sbjct: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSVV 289

[Close]
BLAST of Cp4.1LG19g05480 vs. ExPASy TrEMBL
Match: A0A1S3AYY0 (Coatomer subunit epsilon OS=Cucumis melo OX=3656 GN=LOC103484285 PE=3 SV=1)

HSP 1 Score: 515 bits (1327), Expect = 9.06e-184
Identity = 263/288 (91.32%), Postives = 270/288 (93.75%), Query Frame = 0 

Query: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60
           MAAPDHLFNLRN+FYLGAYQAAINNS+LPNLSPDDAIERDSIV+RSYIALGSYQL +SEI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDAIERDSIVFRSYIALGSYQLAISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPS+KESTIASL EWLSDPAIGNNPTLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSNKESTIASLQEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMEL             SDYAERQLRVMQQ DEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKY MTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 275
           ANLVVC+LHLGKPTSRFLSQLKLSHPDH+LVKRIS AEENFDRAVQSV
Sbjct: 241 ANLVVCNLHLGKPTSRFLSQLKLSHPDHMLVKRISTAEENFDRAVQSV 288

[Close]
BLAST of Cp4.1LG19g05480 vs. ExPASy TrEMBL
Match: A0A5A7UFG1 (Coatomer subunit epsilon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009940 PE=3 SV=1)

HSP 1 Score: 514 bits (1323), Expect = 3.69e-183
Identity = 262/288 (90.97%), Postives = 269/288 (93.40%), Query Frame = 0 

Query: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60
           MAAPDHLFNLRN+FYLGAYQAAINNS+LPNLSPDDAIERDSIV+RSYIALGSYQL +SEI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDAIERDSIVFRSYIALGSYQLAISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDP +KESTIASL EWLSDPAIGNNPTLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPGNKESTIASLQEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMEL             SDYAERQLRVMQQ DEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKY MTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 275
           ANLVVC+LHLGKPTSRFLSQLKLSHPDH+LVKRIS AEENFDRAVQSV
Sbjct: 241 ANLVVCNLHLGKPTSRFLSQLKLSHPDHMLVKRISTAEENFDRAVQSV 288

[Close]
BLAST of Cp4.1LG19g05480 vs. ExPASy TrEMBL
Match: A0A0A0KIF7 (Coatomer subunit epsilon OS=Cucumis sativus OX=3659 GN=Csa_6G526290 PE=3 SV=1)

HSP 1 Score: 512 bits (1319), Expect = 1.50e-182
Identity = 262/288 (90.97%), Postives = 268/288 (93.06%), Query Frame = 0 

Query: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60
           MAAPDHLFNLRN+FYLGAYQAAINNS+LPNLSPDD IERDSIV+RSYIALGSYQL +SEI
Sbjct: 1   MAAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEI 60

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120
           DSSAPTPLQAVKLLALYLSDPSSKESTIASL EWLSDPAIGNN TLRLIAGIIFMHEQDY
Sbjct: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDY 120

Query: 121 NEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180
           NEALKHTNAGGTMEL             SDYAERQLRVMQQ DEDHTLTQLANAWLNLAV
Sbjct: 121 NEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAV 180

Query: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKY MTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL
Sbjct: 181 GGSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240

Query: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 275
           ANLVVCSLHLGKPTSRFLSQLK+SHPDH+LVKRIS AEENFDRAVQSV
Sbjct: 241 ANLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSV 288

[Close]
BLAST of Cp4.1LG19g05480 vs. TAIR 10
Match: AT1G30630.1 (Coatomer epsilon subunit )

HSP 1 Score: 456.1 bits (1172), Expect = 2.1e-128
Identity = 222/287 (77.35%), Postives = 256/287 (89.20%), Query Frame = 0 

Query: 1   MAAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEI 60
           MA PDHLFNLRNHFYLGAYQAAINNS +PNLS +D +ERD +V+R+YIALGSYQLV+SEI
Sbjct: 4   MAGPDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEI 63

Query: 61  DSSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDY 120
           D +A TPLQAVKLLA+YLS P +KESTI+SL EWL+DP +GNN  +RLIAG IFMHE+DY
Sbjct: 64  DEAAATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDY 123

Query: 121 NEALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAV 180
           NEALKHT++GGTM+L             SD+AE+QLRVMQQ DEDHTLTQLA+AWLNLAV
Sbjct: 124 NEALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAV 183

Query: 181 GGSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETL 240
           GGSKIQEAYLIFQDFSEKY MTSLILNG+AVCCMHMGNF+EAETLLLEALNKDAKDPETL
Sbjct: 184 GGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETL 243

Query: 241 ANLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQS 275
           ANLVVCSLH+GK +SR+L+QLKLSHP+H+LVKR ++AE+NF+RA+QS
Sbjct: 244 ANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQS 290

[Close]
BLAST of Cp4.1LG19g05480 vs. TAIR 10
Match: AT2G34840.1 (Coatomer epsilon subunit )

HSP 1 Score: 451.1 bits (1159), Expect = 6.6e-127
Identity = 224/287 (78.05%), Postives = 253/287 (88.15%), Query Frame = 0 

Query: 2   AAPDHLFNLRNHFYLGAYQAAINNSNLPNLSPDDAIERDSIVYRSYIALGSYQLVVSEID 61
           A PDHLFNLRN+FYLGAYQ AINNS + NLSP++A+ERD +V+RSYIALGSYQLV+SEID
Sbjct: 6   AGPDHLFNLRNNFYLGAYQTAINNSEIANLSPENAVERDCLVFRSYIALGSYQLVISEID 65

Query: 62  SSAPTPLQAVKLLALYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDYN 121
            SA TPLQAVKLLA+YLS P +KESTI+SL EWL+D  IGNN TLRLIAGIIFMHE+DYN
Sbjct: 66  ESAATPLQAVKLLAMYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEEDYN 125

Query: 122 EALKHTNAGGTMEL-------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAVG 181
           E LKHT+AGGTM+L             ++YAE+QLRVMQQ DEDHTLTQLA+AWLNLAVG
Sbjct: 126 ETLKHTHAGGTMDLYALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASAWLNLAVG 185

Query: 182 GSKIQEAYLIFQDFSEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETLA 241
           GSKIQEAYLIF+DFSEKY MT LILNG+AVCCM MGNFDEAETLLLEALNKDAKDPETLA
Sbjct: 186 GSKIQEAYLIFEDFSEKYPMTCLILNGKAVCCMQMGNFDEAETLLLEALNKDAKDPETLA 245

Query: 242 NLVVCSLHLGKPTSRFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 276
           NLVVCSLH+GK +SR LSQLKLSHP+H+LVKR+S+AE+NF+RAVQ V
Sbjct: 246 NLVVCSLHVGKSSSRHLSQLKLSHPEHILVKRVSSAEDNFERAVQLV 292

[Close]
BLAST of Cp4.1LG19g05480 vs. TAIR 10
Match: AT2G34840.2 (Coatomer epsilon subunit )

HSP 1 Score: 332.8 bits (852), Expect = 2.6e-91
Identity = 165/213 (77.46%), Postives = 186/213 (87.32%), Query Frame = 0 

Query: 76  LYLSDPSSKESTIASLHEWLSDPAIGNNPTLRLIAGIIFMHEQDYNEALKHTNAGGTMEL 135
           +YLS P +KESTI+SL EWL+D  IGNN TLRLIAGIIFMHE+DYNE LKHT+AGGTM+L
Sbjct: 1   MYLSTPQNKESTISSLKEWLADSTIGNNDTLRLIAGIIFMHEEDYNETLKHTHAGGTMDL 60

Query: 136 -------------SDYAERQLRVMQQTDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDF 195
                        ++YAE+QLRVMQQ DEDHTLTQLA+AWLNLAVGGSKIQEAYLIF+DF
Sbjct: 61  YALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIFEDF 120

Query: 196 SEKYSMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETLANLVVCSLHLGKPTS 255
           SEKY MT LILNG+AVCCM MGNFDEAETLLLEALNKDAKDPETLANLVVCSLH+GK +S
Sbjct: 121 SEKYPMTCLILNGKAVCCMQMGNFDEAETLLLEALNKDAKDPETLANLVVCSLHVGKSSS 180

Query: 256 RFLSQLKLSHPDHLLVKRISAAEENFDRAVQSV 276
           R LSQLKLSHP+H+LVKR+S+AE+NF+RAVQ V
Sbjct: 181 RHLSQLKLSHPEHILVKRVSSAEDNFERAVQLV 213

The following BLAST results are available for this feature:
BLAST of Cp4.1LG19g05480 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SA782.9e-12777.35Coatomer subunit epsilon-1 OS=Arabidopsis thaliana OX=3702 GN=At1g30630 PE=2 SV=... [more]
O647489.3e-12678.05Coatomer subunit epsilon-2 OS=Arabidopsis thaliana OX=3702 GN=At2g34840 PE=2 SV=... [more]
Q9MAX66.9e-12175.35Coatomer subunit epsilon-1 OS=Oryza sativa subsp. japonica OX=39947 GN=COPE1 PE=... [more]
P0C5413.6e-10164.73Coatomer subunit epsilon-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0644... [more]
A2XY731.0e-10064.73Coatomer subunit epsilon-2 OS=Oryza sativa subsp. indica OX=39946 GN=H0413E07.10... [more]
BLAST of Cp4.1LG19g05480 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022926620.15.45e-19295.50coatomer subunit epsilon-1-like [Cucurbita moschata] >XP_023517735.1 coatomer su... [more]
XP_023003039.13.15e-19195.16coatomer subunit epsilon-1-like [Cucurbita maxima][more]
XP_008439506.11.87e-18391.32PREDICTED: coatomer subunit epsilon-1-like [Cucumis melo][more]
XP_038883808.15.36e-18391.67coatomer subunit epsilon-1-like [Benincasa hispida][more]
KAA0052455.17.61e-18390.97coatomer subunit epsilon-1-like [Cucumis melo var. makuwa] >TYK13367.1 coatomer ... [more]
BLAST of Cp4.1LG19g05480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ELM62.64e-19295.50Coatomer subunit epsilon OS=Cucurbita moschata OX=3662 GN=LOC111433698 PE=3 SV=1[more]
A0A6J1KS671.53e-19195.16Coatomer subunit epsilon OS=Cucurbita maxima OX=3661 GN=LOC111496767 PE=3 SV=1[more]
A0A1S3AYY09.06e-18491.32Coatomer subunit epsilon OS=Cucumis melo OX=3656 GN=LOC103484285 PE=3 SV=1[more]
A0A5A7UFG13.69e-18390.97Coatomer subunit epsilon OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A0A0KIF71.50e-18290.97Coatomer subunit epsilon OS=Cucumis sativus OX=3659 GN=Csa_6G526290 PE=3 SV=1[more]
BLAST of Cp4.1LG19g05480 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G30630.12.1e-12877.35Coatomer epsilon subunit [more]
AT2G34840.16.6e-12778.05Coatomer epsilon subunit [more]
AT2G34840.22.6e-9177.46Coatomer epsilon subunit [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF04733Coatomer_Ecoord: 4..275
e-value: 8.2E-121
score: 402.9
NoneNo IPR availablePANTHERPTHR10805:SF4COATOMER SUBUNIT EPSILONcoord: 3..275
IPR006822Coatomer, epsilon subunitPIRSFPIRSF016478Epsilon-COPcoord: 2..275
e-value: 1.8E-77
score: 258.7
IPR006822Coatomer, epsilon subunitPANTHERPTHR10805COATOMER SUBUNIT EPSILONcoord: 3..275
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 5..275
e-value: 9.1E-97
score: 326.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 102..239

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g05480.1Cp4.1LG19g05480.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0015031 protein transport
biological_process GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
cellular_component GO:0030126 COPI vesicle coat
cellular_component GO:0000139 Golgi membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0005198 structural molecule activity