Cp4.1LG19g05250 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g05250
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Protein FAR1-RELATED SEQUENCE
Location	Cp4.1LG19: 8167234 .. 8173018 (-)
RNA-Seq Expression	Cp4.1LG19g05250
Synteny	Cp4.1LG19g05250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCCCACGAGGCCCATTCCGTTCCATTTGAAGTCCAAAGCTGCAAAGAAGCCCAAGGAATTCAAATCTCAAAAGCCCATAAACAAGCTTCTGCCCCTCCCTCTCAAAACCCTAAATTCTCTAGAGCCAATCAATCAATCAATCAATCAATCAAACCCACCCGGGACTCGGAGCGTGAAGAAGCTCATCGGAGACAAGAAATATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCCATCAGGAGAGAGATGGTTGAGCCTATTTACGACAAGAAAGACGCTGCGAAGCTCGCTGCCCAACAGGCTGCTCTTGCTGCCCCTAAGCTTCCCGTGCGCCCCTCACCTTTCACCAATATCTCTACTATGGACGTCGCACCAGCCTCTACTTCAACCGCCGCCGACGCTGCTATGGGTACCCCCTTTCTTCTTTTTATTACTTGTACACGTTTCGTTTTGCTTTTCTTTTTTAATTATTTGGGTTATGGCTTTAATTTTAGTGGTTTTTCATCTCATTGTATGGAAATTCTTTCATTCTCTTCAACTCAATTCTTTCATTCTCATTGTATGGATATCAAAACTATTTCTATTCACTAGGTGCTCAATTTGTAGTCCATTCGTCCCTTCTTATTACAATATCCACTTCCTTTTAATTCTTCATGAATTAGTCTGCATTCCTAGCACTCAGATGTTGTACGATCAAAACGAGAGAGCAGTCAGTGGTGTAGTGTAGAAGGAATGTGGCTCGTTTTTTGAAACTCAACTCTTATTTTATGCTTTAGGCAGATGAATGCAACTTCTTTTATCATCTTGTATGTATAAGTCATATTAGTCGTACAGTATGAGGTATTAAAAATGTTCTCTTTTAATAAGCTAGTTATGTTTGTTTTGGTACTTTCTCTCTGTAATTATGACCCTTAACCTTTGTCATGAAAACTAAAGGAAGCCTAATGCTAAGTGTTGTTATATTGTGCTTTCCTATGAGCTCAGCTCGTGTGTGAGAGACTAGGTTTTGTTTTTAAAATTTTAGAAGAGTTATGTTTTTAAAATTTTAGAAGAGTTATGTTTTTAAAATTTTAGAAGAGTTATGTTTTTAGCTGTTGGACGGGGATGGGGTGTTTTGAGAAGAAATCTGGAAAGGGTCTTTCCAACTCCAATGGTGGCAGCTGCCGAAAACAGAAAGAACAACCTTCATTACTTGTTGAAACTTATTAATTTGAGCTGAGTTGTCTGTAAAAGTAAAGAATATGAAGAGGGGCCTTGAGAATAGAGCTGTTGGATTGGAGGCCCTCATGTATTTGTTTGTTTGTTTGTTTGTTTGTAATTGCGTGTTACAGAGGTGGAGATGGATGATGGCAGTGAAAGCATGATGGCGCTGAAGGCTGTTGGTGGGATTGGCAAGAAATCCAAGAAGAAATTCAAGGTCGGGAAGGCCAAGCGGCGTGGTAAGTGCAAGATCAAGAGGAATCGCCACATCTAGTCCCGTGGCCACTGTACTTGGAGACATGGCCTCTCCCAAGACTTAACTATATTGTATTAAGTATTAAGTTCAGTGACATTTGGTTAACCCTTCTAGTTTAATTATTTATTTCTTACTCTCACTCTTCTGTTTACTTGGTCAACCAATTCTAGCACTTTTTTAACAGGAATCCTCATTCTAATTTAATACATTTTGAAGTTATCATTAAAAAAAATTAACAAAATTATCAAGGAGAATATTAAAAGTAATTTTGATATGAGAATTTAAATTCAAATTTAAAAGAAGAAGTAGACATCGATCTCACTTTAACCAAAAAATAATTAGTTTAGCTTTAGCTTTTTAATTTAAAAAAAAAAAAAAAAAATTTAATGAAAAAGAAACACATGTTGAGCATCGGAAATGACAGTGGTTTGAGTTCTACCTATGTGGTTTGAGTTAATAATAATAAAATAATAAAAACCTACAATACGGATGAGCGAATCAAGCAAGCAAGCAAGGCGAAGAGGCGAGAAGTTGTCACTGGACATCAGAGGGAGCTGAGTTGTTATTTTGCAAATATCTGGTCTGCTTCTGGTTTTCCCCAAATTTTGTGGAGCTGCCGCGATCTTCATCCTCCCTCCTTCCTCCTGATCTAGGTTTGATTGTTCATCTTTTATTTCCAATCCCAATCCCAATCCCAATCCCTCACTTTCCCTTCTCTAATTTTAGACGCCTTCTCGGCGGAACTCTTGACTGGCTGCCCCATGGAAAGCGGAGCAGGTATTCCTTTCTTTATTTTGCGATCTCGCTTCGTCTTTGCGTCGCTTTTCTTTTCTTTTCTTTTCTTCTTTCCTTTCCTGTGATTTCGATGTCTTCTCTCTTTCTCTCATTCTGCTTATACCTCCTCTAATTCGCCTTATAAATGACATTTTTCTCTCCTATAATTGCATTTCTCAAGGTATATCTCGTTTCCCCTCCCCCCATTAGGTGCCTTATCAATGGGAGGCCTCTCACTGACACACAACTTCCCTTCTTCTCCATTCATGGGAGGAGACCCTCTACTGCATATGTGGGACGTTGTATGATAAATACTACGTCATCTCTGAGTGCCTTCAGAGGTGAAATTAATGGTGGATTCGAAGTGGATTTGAATTTTTTTCTTCATCAACTATGGATTCCAATGCGATCGTGTGCAGTTCTATGACAGAGCCATGCCCTGGCATGGAATTTGAATCTCATGAAAATGCATATTCATTCTATAGAGACTACGCCAAGACTATGGGCTTTGGAACTGCCAAATTGAGTAGCCGTCGTTCTAGGGCATCTAAGGAATTTATTGATGCCAAATTTTCATGCACAAGATATGGCAATAAGCAACAATCTGATGACGCTATCAACCCACGACCCTCACCAAAAATTGGTTGTAAGGCGAGCATGCATGTGAAGAGAAAACAGAATGGGAAGTGGTATGTTTATAGTTTTGTAAAAGATCATAATCACGAGCTTTTACCATCTCAAGTTCACCTTTTTAGAAGCCACCGAAACACTGATCTACTCAAGAATGATGTCAGAATACGGAGACGAAAGAATTTAGCTGCCATGTCAAAAATGTTCAGTGCTTATCAGAATGTTGATTGTTTAGAAAGCTATGTGAAAAACCAACACGATAAAGGCCGCACTTTGGTCCTAGAATCAGGGGATGCGCAAATTCTTCTTGAACTTTTTATGCACATGCAGGAAGAGAATCCAAAATTCTTTTATGCAGTTGATTTGAATGAAGAGCACCAGTTGCGCAATGTGTTCTGGGTTGATGGCAAAGGAATGGAAGATTATGTGCGCTTTGGAGATGTGGTTTCATTTGACACCACTTATTTCACAAACAAGTATAAGCTACCATTAGTTCTTTTCATAGGAGTGAACCATCATATTCAACCTACTTTACTTGGTTGTGCACTGATTGCAGATGAGACAGTTAATACATTCAGTTGGTTAATACAAACATGGTACATAGCAATGGGAGAACGAGCACCACAGGTGATGCTTACTGACCAAAATACCAATATTAAAGCAGTCATTGAGGCAGTTCTTCCTGGAACACGTCACTACTTTTGTCTGTGGTATATTTTGCAAAAGATTCCAAAAAATCTCGAATTTTTAAGCATGTGGCATGAGGGTTTTATGGAGGAGTTCAAGAACTGTGTTTTTAAGTCATGGACTAAGGAACAGTTCGAAAAGAGGTGGCAGAAATTGCTCGATGGATTTAGTCTTAGAGAAGTTGAGTGGATGCAATATTTGTATGATGATCGTGCTTATTGGGTGCCTTCTTTTGCTAGAGACGTTTCTTTCGCTGGCTTATGCACATTTTCACGCATGGAAAGTCTGAACTCTTTTTTTGACAAATATGTTAAGATTGAAACATCCTTGACGGAGTTTATAGAGCGATATAAAGACATTCTTGAGGATCGATATGAGGAAGAAGCAAAGGCAAATTTTGATGCTTGGCATGATACACCGGAATTGAAGTCTCCATCTCCATTTGAGAAACAAGTTTCACTAGTATATACGCATGAAATCTTTAAAAAATTTCAAATGGAGGTTTTGGGAGCTGCTGCTTGCCATCTTAAGAAAGAAACTGAAGATGCAACTACTACGACATACACTGTCAAAGACATTGAAGATGGTCAGAATTATGTTGTCGAATGCAGTCACTCAAATTCAGATATATATTGCTCCTGCCGCTCATTTGAATATAAAGGTTTCCTCTGTAGACATGCCATTATTGTTCTCCAAATGTCTGGCGTTTTCAGTATACCATCCAAATATGTACTGCAGCGTTGGACTAACACTGCTACGAGCAGGAATCCAATTAACGAAAAGTTGGATGAGGTGCAATGTAAGGTCCGTCGTTTTAATGACCTTTGTCGAAGAGCTATAATATTGGGTGAAGAAGGGTCTTTGTCTCAGGAGAGTTATGACATTGCACTTTCGGCAATTAATGAAGCCTTGAAACAATGTGCAACTGTGAGTAGGAGTAATTCTGCAGAAAATGATGTGAGGCCTGACAACTCAGGAATTCTTGTTTTTGGTATCGAGGAGGACAACCAATGCAGCAGCAGTTTAGCTGTTGAGAATTCACCTGATCTTAAAGTGATTAATGCTAAAAAGAATCCTAAGAGGGCAGGGTCGAGCAAGGAACCTGCAGCCAATGAAATCAGCAAAAATGGAAAGGTGATCATTATAGCTTTTATATGTTCATGCAAATTTGAATTAGTTTTGATGTATTTCATACTCAATACTGAGGACTAATTTGAATTGGCTATATATATATGTCAGGTATCTCAACCATTGGATGCAAATGCTGGATCCCAGGATGACTTCAATCAATTGGTATGCTCTAATGTTGACAGAACCAGGTTTTGATTAGCATCATAACTTTTCTGAAAAGAAAAATCATGTTAAATATTCTGTCTTGGAGGGCTTGTTTCTTTTAATATTGTTGAACTAAAATAATTCAAGATTCAGGCACCAAGTACGTCTAACCGTCTAAAGAACATGTGTTTGGTTTCTTTGATGAATGTGTTATAAACATAGACATTGAAAGTGCCCATTGTGACCTTAATAGCTTAGGTGAGGTAGAAAAATAATTAAGCCAATTGTGACCTTAATACCAGCAACATGTGGTAGAACATTTGTTATTGCCGGGATTTACCACCTTGGGTTTGCTACCGAGAAATATATTTATGCATACTAGCGACCCTTTTTCTTGTAGGAGGAGGTTGAGAATAGGCACATGGTATTGAGATTCATGTTGTTGTTTTCTTTCCATATTTGTTGCAGGAGTTGAGCGATATGCGGCCAATCCAATTGCATGGAATATCACCGACGCAATTGCATAACATGGTGCCAACACTGCTTCATAATGTGACACCAACACAGTTTCACAGCATGACTTCTGCACATTTGCATGAGAGTCTTCATCCTCGTTGACGCGTGGAGACCTCTGTAAAAATGTATACCTTATAACTTCCTTGAGAATGTATGTATGCAGCAAAACTAATTAAGAACAGTTTCCCAATTCCAACATGTGTAGCCTGTTCTAGAAATGAGCAGTACTTGAGTAGTTGCATCAGTCTTTATATTTCCATTCCTCATTTCTGCATTCTGGTTCTCTTCCTCATCGTTAGAACGGCTACAACTTAGTTTAAGAAAACTGTTGCAGGATACCACCAAGGTTTAGTTGCTGTCTGGGGTCGCCTTCGTTTGGCTGGTGCCACCCACCCATTGTTATATTAGTAATAATAAGTAACCTGATTTACTGGG

mRNA sequence

TGCCCACGAGGCCCATTCCGTTCCATTTGAAGTCCAAAGCTGCAAAGAAGCCCAAGGAATTCAAATCTCAAAAGCCCATAAACAAGCTTCTGCCCCTCCCTCTCAAAACCCTAAATTCTCTAGAGCCAATCAATCAATCAATCAATCAATCAAACCCACCCGGGACTCGGAGCGTGAAGAAGCTCATCGGAGACAAGAAATATGGCGAAATCCATGAGATCCAAGAGAGAGAAGAGGCTGAGAGCCATCAGGAGAGAGATGGTTGAGCCTATTTACGACAAGAAAGACGCTGCGAAGCTCGCTGCCCAACAGGCTGCTCTTGCTGCCCCTAAGCTTCCCGTGCGCCCCTCACCTTTCACCAATATCTCTACTATGGACGTCGCACCAGCCTCTACTTCAACCGCCGCCGACGCTGCTATGGAGGTGGAGATGGATGATGGCAGTGAAAGCATGATGGCGCTGAAGGCTGTTGGTGGGATTGGCAAGAAATCCAAGAAGAAATTCAAGGTCGGGAAGGCCAAGCGGCGTGGTAAGTGCAAGATCAAGAGGAATCGCCACATCTAACGCCTTCTCGGCGGAACTCTTGACTGGCTGCCCCATGGAAAGCGGAGCAGTTCTATGACAGAGCCATGCCCTGGCATGGAATTTGAATCTCATGAAAATGCATATTCATTCTATAGAGACTACGCCAAGACTATGGGCTTTGGAACTGCCAAATTGAGTAGCCGTCGTTCTAGGGCATCTAAGGAATTTATTGATGCCAAATTTTCATGCACAAGATATGGCAATAAGCAACAATCTGATGACGCTATCAACCCACGACCCTCACCAAAAATTGGTTGTAAGGCGAGCATGCATGTGAAGAGAAAACAGAATGGGAAGTGTATACCATCCAAATATGTACTGCAGCGTTGGACTAACACTGCTACGAGCAGGAATCCAATTAACGAAAAGTTGGATGAGGTGCAATGTAAGGTCCGTCGTTTTAATGACCTTTGTCGAAGAGCTATAATATTGGGTGAAGAAGGGTCTTTGTCTCAGGAGAGTTATGACATTGCACTTTCGGCAATTAATGAAGCCTTGAAACAATGTGCAACTGTGAGTAGGAGTAATTCTGCAGAAAATGATGTGAGGCCTGACAACTCAGGAATTCTTGTTTTTGGTATCGAGGAGGACAACCAATGCAGCAGCAGTTTAGCTGTTGAGAATTCACCTGATCTTAAAGTGATTAATGCTAAAAAGAATCCTAAGAGGGCAGGGTCGAGCAAGGAACCTGCAGCCAATGAAATCAGCAAAAATGGAAAGGTATCTCAACCATTGGATGCAAATGCTGGATCCCAGGATGACTTCAATCAATTGGAGTTGAGCGATATGCGGCCAATCCAATTGCATGGAATATCACCGACGCAATTGCATAACATGGTGCCAACACTGCTTCATAATGTGACACCAACACAGTTTCACAGCATGACTTCTGCACATTTGCATGAGAGTCTTCATCCTCGTTGACGCGTGGAGACCTCTGTAAAAATGTATACCTTATAACTTCCTTGAGAATGTATGTATGCAGCAAAACTAATTAAGAACAGTTTCCCAATTCCAACATGTGTAGCCTGTTCTAGAAATGAGCAGTACTTGAGTAGTTGCATCAGTCTTTATATTTCCATTCCTCATTTCTGCATTCTGGTTCTCTTCCTCATCGTTAGAACGGCTACAACTTAGTTTAAGAAAACTGTTGCAGGATACCACCAAGGTTTAGTTGCTGTCTGGGGTCGCCTTCGTTTGGCTGGTGCCACCCACCCATTGTTATATTAGTAATAATAAGTAACCTGATTTACTGGG

Coding sequence (CDS)

ATGACAGAGCCATGCCCTGGCATGGAATTTGAATCTCATGAAAATGCATATTCATTCTATAGAGACTACGCCAAGACTATGGGCTTTGGAACTGCCAAATTGAGTAGCCGTCGTTCTAGGGCATCTAAGGAATTTATTGATGCCAAATTTTCATGCACAAGATATGGCAATAAGCAACAATCTGATGACGCTATCAACCCACGACCCTCACCAAAAATTGGTTGTAAGGCGAGCATGCATGTGAAGAGAAAACAGAATGGGAAGTGTATACCATCCAAATATGTACTGCAGCGTTGGACTAACACTGCTACGAGCAGGAATCCAATTAACGAAAAGTTGGATGAGGTGCAATGTAAGGTCCGTCGTTTTAATGACCTTTGTCGAAGAGCTATAATATTGGGTGAAGAAGGGTCTTTGTCTCAGGAGAGTTATGACATTGCACTTTCGGCAATTAATGAAGCCTTGAAACAATGTGCAACTGTGAGTAGGAGTAATTCTGCAGAAAATGATGTGAGGCCTGACAACTCAGGAATTCTTGTTTTTGGTATCGAGGAGGACAACCAATGCAGCAGCAGTTTAGCTGTTGAGAATTCACCTGATCTTAAAGTGATTAATGCTAAAAAGAATCCTAAGAGGGCAGGGTCGAGCAAGGAACCTGCAGCCAATGAAATCAGCAAAAATGGAAAGGTATCTCAACCATTGGATGCAAATGCTGGATCCCAGGATGACTTCAATCAATTGGAGTTGAGCGATATGCGGCCAATCCAATTGCATGGAATATCACCGACGCAATTGCATAACATGGTGCCAACACTGCTTCATAATGTGACACCAACACAGTTTCACAGCATGACTTCTGCACATTTGCATGAGAGTCTTCATCCTCGTTGA

Protein sequence

MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQSDDAINPRPSPKIGCKASMHVKRKQNGKCIPSKYVLQRWTNTATSRNPINEKLDEVQCKVRRFNDLCRRAIILGEEGSLSQESYDIALSAINEALKQCATVSRSNSAENDVRPDNSGILVFGIEEDNQCSSSLAVENSPDLKVINAKKNPKRAGSSKEPAANEISKNGKVSQPLDANAGSQDDFNQLELSDMRPIQLHGISPTQLHNMVPTLLHNVTPTQFHSMTSAHLHESLHPR

Homology

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BLAST of Cp4.1LG19g05250 vs. ExPASy Swiss-Prot
Match: Q6NQJ7 (Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana OX=3702 GN=FRS4 PE=2 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 1.5e-33
Identity = 69/81 (85.19%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 8  MEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQSDDAINP 67
          MEFE+HE+AY FY+DYAK++GFGTAKLSSRRSRASKEFIDAKFSC RYG+KQQSDDAINP
Sbjct: 1  MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSDDAINP 60

Query: 68 RPSPKIGCKASMHVKRKQNGK 89
          R SPKIGCKASMHVKR+ +GK
Sbjct: 61 RASPKIGCKASMHVKRRPDGK 81

HSP 2 Score: 124.8 bits (312), Expect = 1.6e-27
Identity = 87/226 (38.50%), Postives = 128/226 (56.64%), Query Frame = 0


Query: 75  CKASMHVKRKQNGKCIPSKYVLQRWTNTATSRNPINEKLDEVQCKVRRFNDLCRRAIILG 134
           C+ ++ V +      IP  YVLQRWTN A +R+ I+  L+ VQ  +RRFNDLCRRAIILG
Sbjct: 515 CRHAIVVLQMSGVFTIPINYVLQRWTNAARNRHQISRNLELVQSNIRRFNDLCRRAIILG 574

Query: 135 EEGSLSQESYDIALSAINEALKQCATVSRSNSAENDVRPDNSGILVFG-IEEDNQC-SSS 194
           EEGSLSQESYDIA+ A+ EA KQCA     N+ ++  R + + I     ++E+NQ  S+S
Sbjct: 575 EEGSLSQESYDIAMFAMKEAFKQCAVT--INTIKHPARCEEAAIQAGDPVQEENQYGSTS 634

Query: 195 LAVENSPDLKVINAKKNPKRAGSSKE--PAANEISKNGK-VSQPLDANAGSQDDFNQLEL 254
             +   P+   I+A   P +A + +E   + N  SK  K V+Q      GSQ+ F  +  
Sbjct: 635 TQIGPEPN---IHAGNVPWQAETRREKRSSLNNTSKKAKHVAQSETVGEGSQEGFQHV-- 694

Query: 255 SDMRPIQLHGISPTQLHNMVPTLLHNVTPTQFHSMTSAHLHESLHP 296
               P Q   +   Q HN +P +  N+  T F ++ + ++H++  P
Sbjct: 695 --ADPRQSQAVLAGQFHNTMPGVFQNLINTNFQNIPATNMHQNNPP 731

[Close]

BLAST of Cp4.1LG19g05250 vs. ExPASy Swiss-Prot
Match: Q9LIE5 (Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.5e-20
Identity = 52/109 (47.71%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 3   EPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQSD 62
           EP  GMEFESH  AYSFY++Y++ MGF TA  +SRRS+ ++EFIDAKF+C+RYG K++ D
Sbjct: 69  EPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYD 128

Query: 63  DAIN----------------PRPSPKIGCKASMHVKRKQNGKCIPSKYV 96
            + N                 R   K  CKASMHVKR+ +GK +   +V
Sbjct: 129 KSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFV 177

HSP 2 Score: 81.6 bits (200), Expect = 1.6e-14
Identity = 48/118 (40.68%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 75  CKASMHVKRKQNGKCIPSKYVLQRWTNTATSRNPINEKLDEVQCKVRRFNDLCRRAIILG 134
           C+ +++V +  +   IPS+Y+L+RWT  A SR+   E   ++Q ++ R+NDLC RA+ L 
Sbjct: 589 CRHTLNVLQCCHLSSIPSQYILKRWTKDAKSRHFSGEP-QQLQTRLLRYNDLCERALKLN 648

Query: 135 EEGSLSQESYDIALSAINEALKQCATVSRSNSAENDVRPDNSGILVFGIEEDNQCSSS 193
           EE SLSQESY+IA  AI  A+  CA ++ S  +  DV    +  L+  +EEDN   S+
Sbjct: 649 EEASLSQESYNIAFLAIEGAIGNCAGINTSGRSLPDVVTSPTQGLI-SVEEDNHSRSA 704

[Close]

BLAST of Cp4.1LG19g05250 vs. ExPASy Swiss-Prot
Match: Q3EBQ3 (Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.3e-20
Identity = 46/89 (51.69%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 7   GMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQSDDAIN 66
           GM+FES E AY FYR+YA+++GFG    +SRRS+ S +FID K +C+R+G K++   AIN
Sbjct: 41  GMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGTKREKATAIN 100

Query: 67  PRPSPKIGCKASMHVKRKQNGKCIPSKYV 96
           PR  PK GCKA +H+KRK++ K +   +V
Sbjct: 101 PRSCPKTGCKAGLHMKRKEDEKWVIYNFV 129

HSP 2 Score: 67.4 bits (163), Expect = 3.1e-10
Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 0


Query: 75  CKASMHVKRKQNGKCIPSKYVLQRWTNTATSRNPINEKLDEVQCKVRRFNDLCRRAIILG 134
           CK ++ V +  +   +PS+Y+L+RW+    ++   N+K   +  ++ RF+DLCRR + LG
Sbjct: 524 CKHAILVLQSADVSRVPSQYILKRWSKKGNNKEDKNDKCATIDNRMARFDDLCRRFVKLG 583

Query: 135 EEGSLSQESYDIALSAINEALKQCATVSRSNSAENDVRPD 175
              SLS E+   AL  + E +K C  VS  NS++    PD
Sbjct: 584 VVASLSDEACKTALKLLEETVKHC--VSMDNSSKFPSEPD 621

[Close]

BLAST of Cp4.1LG19g05250 vs. ExPASy Swiss-Prot
Match: Q9SWG3 (Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.0e-18
Identity = 47/96 (48.96%), Postives = 67/96 (69.79%), Query Frame = 0


Query: 3   EPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYG---NKQ 62
           EP  G++F++HE AY FY++YAK+MGF T+  +SRRS+ +K+FIDAKF+C+RYG     +
Sbjct: 50  EPRNGIDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESE 109

Query: 63  QSDDAINPRPSPKIGCKASMHVKRKQNGKCIPSKYV 96
            S  +       K  CKASMHVKR+ +GK I  ++V
Sbjct: 110 SSGSSSRRSTVKKTDCKASMHVKRRPDGKWIIHEFV 145

HSP 2 Score: 78.2 bits (191), Expect = 1.8e-13
Identity = 51/171 (29.82%), Postives = 87/171 (50.88%), Query Frame = 0


Query: 75  CKASMHVKRKQNGKCIPSKYVLQRWTNTATSRNPINEKLDEVQCKVRRFNDLCRRAIILG 134
           C+ ++ + +      IP +Y+L+RWT  A S     E  D++Q +V+R+NDLC RA  L 
Sbjct: 580 CRHALMILQMCGFASIPPQYILKRWTKDAKSGVLAGEGADQIQTRVQRYNDLCSRATELS 639

Query: 135 EEGSLSQESYDIALSAINEALKQCATVSRSNSAENDVRPDNSGILVFGIEEDNQCSSSLA 194
           EEG +S+E+Y+IAL  + E LK C  +   N+A N++   NS +     EE+NQ  + + 
Sbjct: 640 EEGCVSEENYNIALRTLVETLKNCVDM---NNARNNITESNSQLNNGTHEEENQVMAGVK 699

Query: 195 VENSPDLKVINAKKNPKRAGSSKEPAANEISKNGKVSQPLDANAGSQDDFN 246
                       KK         +  A+++ ++ +  QP++  +    D N
Sbjct: 700 A----------TKKKTVYRKRKGQQEASQMLESQQSLQPMETISSEAMDMN 737

[Close]

BLAST of Cp4.1LG19g05250 vs. ExPASy Swiss-Prot
Match: Q5UBY2 (Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=FRS1 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 9.3e-15
Identity = 46/101 (45.54%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 7   GMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQSDDA-- 66
           G EFES E A+ FY++YA ++GF T   +SRRSR + +FIDAKF CTRYG+K++  D   
Sbjct: 24  GREFESKEEAFEFYKEYANSVGFTTIIKASRRSRMTGKFIDAKFVCTRYGSKKEDIDTGL 83

Query: 67  ---------------INPRPSPKIGCKASMHVKRKQNGKCI 91
                          IN R S K  CKA +HVKR+Q+G+ +
Sbjct: 84  GTDGFNIPQARKRGRIN-RSSSKTDCKAFLHVKRRQDGRWV 123

HSP 2 Score: 69.7 bits (169), Expect = 6.3e-11
Identity = 38/96 (39.58%), Postives = 61/96 (63.54%), Query Frame = 0


Query: 75  CKASMHVKRKQNGKCIPSKYVLQRWTNTATSRNPI-NEKLDEVQCKVRRFNDLCRRAIIL 134
           C+ +M V +      IPS+YVL+RWT  A SR  + +++ D    K +R+ DLC R++ L
Sbjct: 465 CRHAMIVLQMSGELSIPSQYVLKRWTKDAKSREVMESDQTDVESTKAQRYKDLCLRSLKL 524

Query: 135 GEEGSLSQESYDIALSAINEALKQCATVSRSNSAEN 170
            EE SLS+ESY+  ++ +NEAL++    ++SN  +N
Sbjct: 525 SEEASLSEESYNAVVNVLNEALRKWE--NKSNLIQN 558

[Close]

BLAST of Cp4.1LG19g05250 vs. NCBI nr
Match: XP_023517944.1 (protein FAR1-RELATED SEQUENCE 4 [Cucurbita pepo subsp. pepo] >XP_023517945.1 protein FAR1-RELATED SEQUENCE 4 [Cucurbita pepo subsp. pepo] >XP_023517946.1 protein FAR1-RELATED SEQUENCE 4 [Cucurbita pepo subsp. pepo] >XP_023517947.1 protein FAR1-RELATED SEQUENCE 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414 bits (1065), Expect = 8.39e-137
Identity = 295/743 (39.70%), Postives = 295/743 (39.70%), Query Frame = 0


Query: 1   MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ 60
           MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ
Sbjct: 11  MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ 70

Query: 61  SDDAINPRPSPKIGCKASMHVKRKQNGK-------------------------------- 120
           SDDAINPRPSPKIGCKASMHVKRKQNGK                                
Sbjct: 71  SDDAINPRPSPKIGCKASMHVKRKQNGKWYVYSFVKDHNHELLPSQVHLFRSHRNTDLLK 130

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 131 NDVRIRRRKNLAAMSKMFSAYQNVDCLESYVKNQHDKGRTLVLESGDAQILLELFMHMQE 190

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 191 ENPKFFYAVDLNEEHQLRNVFWVDGKGMEDYVRFGDVVSFDTTYFTNKYKLPLVLFIGVN 250

Query: 241 ------------------------------------------------------------ 296
                                                                       
Sbjct: 251 HHIQPTLLGCALIADETVNTFSWLIQTWYIAMGERAPQVMLTDQNTNIKAVIEAVLPGTR 310

[Close]

BLAST of Cp4.1LG19g05250 vs. NCBI nr
Match: XP_023003308.1 (protein FAR1-RELATED SEQUENCE 4 [Cucurbita maxima] >XP_023003309.1 protein FAR1-RELATED SEQUENCE 4 [Cucurbita maxima] >XP_023003310.1 protein FAR1-RELATED SEQUENCE 4 [Cucurbita maxima] >XP_023003311.1 protein FAR1-RELATED SEQUENCE 4 [Cucurbita maxima])

HSP 1 Score: 411 bits (1057), Expect = 1.33e-135
Identity = 293/743 (39.43%), Postives = 295/743 (39.70%), Query Frame = 0


Query: 1   MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ 60
           MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ
Sbjct: 11  MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ 70

Query: 61  SDDAINPRPSPKIGCKASMHVKRKQNGK-------------------------------- 120
           SDDAINPRPSPKIGCKASMHVKRKQNGK                                
Sbjct: 71  SDDAINPRPSPKIGCKASMHVKRKQNGKWYVYSFVKDHNHELLPSQVHLFRSHRNTDLLK 130

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 131 NDVRIRRRKNLTAMSKMFSAYQNVDCLESYVKNQHDKGRTLVLESGDAQILLELFMHMQE 190

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 191 ENPKFFYAVDLNEEHQLRNVFWVDGKGMEDYVRFGDVVSFDTTYFTNKYKLPLVLFIGVN 250

Query: 241 ------------------------------------------------------------ 296
                                                                       
Sbjct: 251 HHIQPTLLGCALIADETVNTFSWLIQTWYIAMGERTPQVMLTDQNTNIKAVIEAVLPGTR 310

[Close]

BLAST of Cp4.1LG19g05250 vs. NCBI nr
Match: XP_022926687.1 (protein FAR1-RELATED SEQUENCE 4 [Cucurbita moschata] >XP_022926688.1 protein FAR1-RELATED SEQUENCE 4 [Cucurbita moschata] >XP_022926689.1 protein FAR1-RELATED SEQUENCE 4 [Cucurbita moschata] >XP_022926690.1 protein FAR1-RELATED SEQUENCE 4 [Cucurbita moschata])

HSP 1 Score: 410 bits (1054), Expect = 3.76e-135
Identity = 293/743 (39.43%), Postives = 294/743 (39.57%), Query Frame = 0


Query: 1   MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ 60
           MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ
Sbjct: 11  MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ 70

Query: 61  SDDAINPRPSPKIGCKASMHVKRKQNGK-------------------------------- 120
           SDDAINPRPSPKIGCKASMHVKRKQNGK                                
Sbjct: 71  SDDAINPRPSPKIGCKASMHVKRKQNGKWYVYSFVKDHNHELLPSQVHLFRSHRNTDLLK 130

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 131 NDVRIRRRKNLAAMSKMFSAYQNVDCLESYVKNQHDKGRTLVLESGDAQILLELFMHMQE 190

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 191 ENPKFFYAVDLNEGHQFRNVFWVDGKGMEDYVRFGDVVSFDTTYFTNKYKLPLVFFIGVN 250

Query: 241 ------------------------------------------------------------ 296
                                                                       
Sbjct: 251 HHIQPTLLGCALIADETVNTFSWLIQTWYIAMGERAPQVMLTDQNTNIKAVIEAVLPGTR 310

[Close]

BLAST of Cp4.1LG19g05250 vs. NCBI nr
Match: KAG7026381.1 (Protein FAR1-RELATED SEQUENCE 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 405 bits (1041), Expect = 2.56e-133
Identity = 291/743 (39.17%), Postives = 292/743 (39.30%), Query Frame = 0


Query: 1   MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ 60
           MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ
Sbjct: 1   MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ 60

Query: 61  SDDAINPRPSPKIGCKASMHVKRKQNGK-------------------------------- 120
           SDDAINPRPSPKIGCKASMHVKRKQNGK                                
Sbjct: 61  SDDAINPRPSPKIGCKASMHVKRKQNGKWYVYSFVKDHNHELLPSQVHLFRSHRNTDLLK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 NDVRIRRRKNLAAMSKMFSAYQNVDCLESYVKNQHDKGRTLVLESGDAQILLELFMHMQE 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 ENPKFFYAVDLNEEHQLRNVFWVDGKGMEDYVRFGDVVSFDTTYFTNKYKLPLVLFIGVN 240

Query: 241 ------------------------------------------------------------ 296
                                                                       
Sbjct: 241 HHIQPTLLGCALIADETINTFSWLIQTWYIAMGERAPQVMLTDQNTNIKAVIEAVLPGTR 300

[Close]

BLAST of Cp4.1LG19g05250 vs. NCBI nr
Match: KAG6594377.1 (Protein FAR1-RELATED SEQUENCE 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 405 bits (1041), Expect = 3.35e-133
Identity = 291/743 (39.17%), Postives = 292/743 (39.30%), Query Frame = 0


Query: 1   MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ 60
           MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ
Sbjct: 11  MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ 70

Query: 61  SDDAINPRPSPKIGCKASMHVKRKQNGK-------------------------------- 120
           SDDAINPRPSPKIGCKASMHVKRKQNGK                                
Sbjct: 71  SDDAINPRPSPKIGCKASMHVKRKQNGKWYVYSFVKDHNHELLPSQVHLFRSHRNTDLLK 130

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 131 NDVRIRRRKNLAAMSKMFSAYQNVDCLESYVKNQHDKGRTLVLESGDAQILLELFMHMQE 190

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 191 ENPKFFYAVDLNEEHQLRNVFWVDGKGMEDYVRFGDVVSFDTTYFTNKYKLPLVLFIGVN 250

Query: 241 ------------------------------------------------------------ 296
                                                                       
Sbjct: 251 HHIQPTLLGCALIADETVNTFSWLIQTWYIAMGERAPQVMLTDQNTNIKAVIEAVLPGTR 310

[Close]

BLAST of Cp4.1LG19g05250 vs. ExPASy TrEMBL
Match: A0A6J1KSY6 (Protein FAR1-RELATED SEQUENCE OS=Cucurbita maxima OX=3661 GN=LOC111496956 PE=3 SV=1)

HSP 1 Score: 411 bits (1057), Expect = 6.45e-136
Identity = 293/743 (39.43%), Postives = 295/743 (39.70%), Query Frame = 0


Query: 1   MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ 60
           MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ
Sbjct: 11  MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ 70

Query: 61  SDDAINPRPSPKIGCKASMHVKRKQNGK-------------------------------- 120
           SDDAINPRPSPKIGCKASMHVKRKQNGK                                
Sbjct: 71  SDDAINPRPSPKIGCKASMHVKRKQNGKWYVYSFVKDHNHELLPSQVHLFRSHRNTDLLK 130

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 131 NDVRIRRRKNLTAMSKMFSAYQNVDCLESYVKNQHDKGRTLVLESGDAQILLELFMHMQE 190

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 191 ENPKFFYAVDLNEEHQLRNVFWVDGKGMEDYVRFGDVVSFDTTYFTNKYKLPLVLFIGVN 250

Query: 241 ------------------------------------------------------------ 296
                                                                       
Sbjct: 251 HHIQPTLLGCALIADETVNTFSWLIQTWYIAMGERTPQVMLTDQNTNIKAVIEAVLPGTR 310

[Close]

BLAST of Cp4.1LG19g05250 vs. ExPASy TrEMBL
Match: A0A6J1ELU9 (Protein FAR1-RELATED SEQUENCE OS=Cucurbita moschata OX=3662 GN=LOC111433743 PE=3 SV=1)

HSP 1 Score: 410 bits (1054), Expect = 1.82e-135
Identity = 293/743 (39.43%), Postives = 294/743 (39.57%), Query Frame = 0


Query: 1   MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ 60
           MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ
Sbjct: 11  MTEPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQ 70

Query: 61  SDDAINPRPSPKIGCKASMHVKRKQNGK-------------------------------- 120
           SDDAINPRPSPKIGCKASMHVKRKQNGK                                
Sbjct: 71  SDDAINPRPSPKIGCKASMHVKRKQNGKWYVYSFVKDHNHELLPSQVHLFRSHRNTDLLK 130

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 131 NDVRIRRRKNLAAMSKMFSAYQNVDCLESYVKNQHDKGRTLVLESGDAQILLELFMHMQE 190

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 191 ENPKFFYAVDLNEGHQFRNVFWVDGKGMEDYVRFGDVVSFDTTYFTNKYKLPLVFFIGVN 250

Query: 241 ------------------------------------------------------------ 296
                                                                       
Sbjct: 251 HHIQPTLLGCALIADETVNTFSWLIQTWYIAMGERAPQVMLTDQNTNIKAVIEAVLPGTR 310

[Close]

BLAST of Cp4.1LG19g05250 vs. ExPASy TrEMBL
Match: A0A1S4DTL1 (Protein FAR1-RELATED SEQUENCE OS=Cucumis melo OX=3656 GN=LOC103484243 PE=3 SV=1)

HSP 1 Score: 323 bits (827), Expect = 5.26e-102
Identity = 170/222 (76.58%), Postives = 189/222 (85.14%), Query Frame = 0


Query: 75  CKASMHVKRKQNGKCIPSKYVLQRWTNTATSRNPINEKLDEVQCKVRRFNDLCRRAIILG 134
           C+ ++ V +      IPSKY+LQRWTNTA SRNPINEKLDEVQCKVRRFNDLCRRAIILG
Sbjct: 496 CRHAIIVLQMSGVFSIPSKYILQRWTNTAMSRNPINEKLDEVQCKVRRFNDLCRRAIILG 555

Query: 135 EEGSLSQESYDIALSAINEALKQCATVSRSNSAENDVRPDNSGILVFGIEEDNQCSSSLA 194
           EEGSLSQESYDIALSAINEALKQCATVSRS+SAE+DVR D S +LVFGIE DNQC+++LA
Sbjct: 556 EEGSLSQESYDIALSAINEALKQCATVSRSSSAESDVRSDTSAMLVFGIE-DNQCNNNLA 615

Query: 195 VENSPDLKVINAKKNPKRAGSSKEPAANEISKNGKVSQPLDANAGSQDDFNQLELSDMRP 254
           V+N+PDLKVINAKK P  AGSS EPA NE +KN KVSQP   NAGS+DDFNQ+ELSDMRP
Sbjct: 616 VDNAPDLKVINAKKIPNLAGSSNEPAVNESNKNRKVSQPFATNAGSRDDFNQMELSDMRP 675

Query: 255 IQLHGISPTQLHNMVPTLLHNVTPTQFHSMTSAHLHESLHPR 296
           IQL+GISPTQLHNMVPTLL      QFHSM+S+HLHE   PR
Sbjct: 676 IQLNGISPTQLHNMVPTLL------QFHSMSSSHLHEDRLPR 710

[Close]

BLAST of Cp4.1LG19g05250 vs. ExPASy TrEMBL
Match: A0A1S3AYS5 (Protein FAR1-RELATED SEQUENCE OS=Cucumis melo OX=3656 GN=LOC103484243 PE=3 SV=1)

HSP 1 Score: 323 bits (827), Expect = 1.23e-101
Identity = 170/222 (76.58%), Postives = 189/222 (85.14%), Query Frame = 0


Query: 75  CKASMHVKRKQNGKCIPSKYVLQRWTNTATSRNPINEKLDEVQCKVRRFNDLCRRAIILG 134
           C+ ++ V +      IPSKY+LQRWTNTA SRNPINEKLDEVQCKVRRFNDLCRRAIILG
Sbjct: 532 CRHAIIVLQMSGVFSIPSKYILQRWTNTAMSRNPINEKLDEVQCKVRRFNDLCRRAIILG 591

Query: 135 EEGSLSQESYDIALSAINEALKQCATVSRSNSAENDVRPDNSGILVFGIEEDNQCSSSLA 194
           EEGSLSQESYDIALSAINEALKQCATVSRS+SAE+DVR D S +LVFGIE DNQC+++LA
Sbjct: 592 EEGSLSQESYDIALSAINEALKQCATVSRSSSAESDVRSDTSAMLVFGIE-DNQCNNNLA 651

Query: 195 VENSPDLKVINAKKNPKRAGSSKEPAANEISKNGKVSQPLDANAGSQDDFNQLELSDMRP 254
           V+N+PDLKVINAKK P  AGSS EPA NE +KN KVSQP   NAGS+DDFNQ+ELSDMRP
Sbjct: 652 VDNAPDLKVINAKKIPNLAGSSNEPAVNESNKNRKVSQPFATNAGSRDDFNQMELSDMRP 711

Query: 255 IQLHGISPTQLHNMVPTLLHNVTPTQFHSMTSAHLHESLHPR 296
           IQL+GISPTQLHNMVPTLL      QFHSM+S+HLHE   PR
Sbjct: 712 IQLNGISPTQLHNMVPTLL------QFHSMSSSHLHEDRLPR 746

[Close]

BLAST of Cp4.1LG19g05250 vs. ExPASy TrEMBL
Match: A0A0A0KIK5 (Protein FAR1-RELATED SEQUENCE OS=Cucumis sativus OX=3659 GN=Csa_6G538640 PE=3 SV=1)

HSP 1 Score: 313 bits (803), Expect = 4.57e-98
Identity = 169/223 (75.78%), Postives = 187/223 (83.86%), Query Frame = 0


Query: 75  CKASMHVKRKQNGKCIPSKYVLQRWTNTATSRNPINEKLDEVQCKVRRFNDLCRRAIILG 134
           C+ ++ V +      IPSKY+LQRWTNTA SRNPINEKLDEVQ KVRRFNDLCRRAIILG
Sbjct: 532 CRHAIIVLQMSGVFSIPSKYILQRWTNTAMSRNPINEKLDEVQYKVRRFNDLCRRAIILG 591

Query: 135 EEGSLSQESYDIALSAINEALKQCATVSRSNSAENDVRPDNSGILVFGIEEDNQCSSS-L 194
           EEGSLSQESYDIALSAINEALKQCATVSRS+SAE DVR D S +LVFGIE DNQC+++ L
Sbjct: 592 EEGSLSQESYDIALSAINEALKQCATVSRSSSAETDVRSDTSTMLVFGIE-DNQCNNNNL 651

Query: 195 AVENSPDLKVINAKKNPKRAGSSKEPAANEISKNGKVSQPLDANAGSQDDFNQLELSDMR 254
           AV+N+PDLKVINAKK P  AGSS EP  NE +KNGKVSQP   NAGS+DDFNQ+ELSDMR
Sbjct: 652 AVDNAPDLKVINAKKIPNLAGSSNEPEVNESNKNGKVSQPFATNAGSRDDFNQMELSDMR 711

Query: 255 PIQLHGISPTQLHNMVPTLLHNVTPTQFHSMTSAHLHESLHPR 296
           PIQL GISPTQLHNMVPTLL      QFHSM+S+HLHE+  PR
Sbjct: 712 PIQLSGISPTQLHNMVPTLL------QFHSMSSSHLHENRLPR 747

[Close]

BLAST of Cp4.1LG19g05250 vs. TAIR 10
Match: AT1G76320.1 (FAR1-related sequence 4 )

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-34
Identity = 69/81 (85.19%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 8  MEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQSDDAINP 67
          MEFE+HE+AY FY+DYAK++GFGTAKLSSRRSRASKEFIDAKFSC RYG+KQQSDDAINP
Sbjct: 1  MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSDDAINP 60

Query: 68 RPSPKIGCKASMHVKRKQNGK 89
          R SPKIGCKASMHVKR+ +GK
Sbjct: 61 RASPKIGCKASMHVKRRPDGK 81

HSP 2 Score: 124.8 bits (312), Expect = 1.2e-28
Identity = 87/226 (38.50%), Postives = 128/226 (56.64%), Query Frame = 0


Query: 75  CKASMHVKRKQNGKCIPSKYVLQRWTNTATSRNPINEKLDEVQCKVRRFNDLCRRAIILG 134
           C+ ++ V +      IP  YVLQRWTN A +R+ I+  L+ VQ  +RRFNDLCRRAIILG
Sbjct: 515 CRHAIVVLQMSGVFTIPINYVLQRWTNAARNRHQISRNLELVQSNIRRFNDLCRRAIILG 574

Query: 135 EEGSLSQESYDIALSAINEALKQCATVSRSNSAENDVRPDNSGILVFG-IEEDNQC-SSS 194
           EEGSLSQESYDIA+ A+ EA KQCA     N+ ++  R + + I     ++E+NQ  S+S
Sbjct: 575 EEGSLSQESYDIAMFAMKEAFKQCAVT--INTIKHPARCEEAAIQAGDPVQEENQYGSTS 634

Query: 195 LAVENSPDLKVINAKKNPKRAGSSKE--PAANEISKNGK-VSQPLDANAGSQDDFNQLEL 254
             +   P+   I+A   P +A + +E   + N  SK  K V+Q      GSQ+ F  +  
Sbjct: 635 TQIGPEPN---IHAGNVPWQAETRREKRSSLNNTSKKAKHVAQSETVGEGSQEGFQHV-- 694

Query: 255 SDMRPIQLHGISPTQLHNMVPTLLHNVTPTQFHSMTSAHLHESLHP 296
               P Q   +   Q HN +P +  N+  T F ++ + ++H++  P
Sbjct: 695 --ADPRQSQAVLAGQFHNTMPGVFQNLINTNFQNIPATNMHQNNPP 731

[Close]

BLAST of Cp4.1LG19g05250 vs. TAIR 10
Match: AT1G76320.2 (FAR1-related sequence 4 )

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-34
Identity = 69/81 (85.19%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 8  MEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQSDDAINP 67
          MEFE+HE+AY FY+DYAK++GFGTAKLSSRRSRASKEFIDAKFSC RYG+KQQSDDAINP
Sbjct: 1  MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSDDAINP 60

Query: 68 RPSPKIGCKASMHVKRKQNGK 89
          R SPKIGCKASMHVKR+ +GK
Sbjct: 61 RASPKIGCKASMHVKRRPDGK 81

HSP 2 Score: 122.5 bits (306), Expect = 5.8e-28
Identity = 86/225 (38.22%), Postives = 127/225 (56.44%), Query Frame = 0


Query: 75  CKASMHVKRKQNGKCIPSKYVLQRWTNTATSRNPINEKLDEVQCKVRRFNDLCRRAIILG 134
           C+ ++ V +      IP  YVLQRWTN A +R+ I+  L+ VQ  +RRFNDLCRRAIILG
Sbjct: 515 CRHAIVVLQMSGVFTIPINYVLQRWTNAARNRHQISRNLELVQSNIRRFNDLCRRAIILG 574

Query: 135 EEGSLSQESYDIALSAINEALKQCATVSRSNSAENDVRPDNSGILVFG-IEEDNQC-SSS 194
           EEGSLSQESYDIA+ A+ EA KQCA     N+ ++  R + + I     ++E+NQ  S+S
Sbjct: 575 EEGSLSQESYDIAMFAMKEAFKQCAVT--INTIKHPARCEEAAIQAGDPVQEENQYGSTS 634

Query: 195 LAVENSPDLKVINAKKNPKRAGSSKE--PAANEISKNGKVSQPLDANAGSQDDFNQLELS 254
             +   P+   I+A   P +A + +E   + N  SK   V+Q      GSQ+ F  +   
Sbjct: 635 TQIGPEPN---IHAGNVPWQAETRREKRSSLNNTSKK-HVAQSETVGEGSQEGFQHV--- 694

Query: 255 DMRPIQLHGISPTQLHNMVPTLLHNVTPTQFHSMTSAHLHESLHP 296
              P Q   +   Q HN +P +  N+  T F ++ + ++H++  P
Sbjct: 695 -ADPRQSQAVLAGQFHNTMPGVFQNLINTNFQNIPATNMHQNNPP 729

[Close]

BLAST of Cp4.1LG19g05250 vs. TAIR 10
Match: AT3G22170.1 (far-red elongated hypocotyls 3 )

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-21
Identity = 52/109 (47.71%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 3   EPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQSD 62
           EP  GMEFESH  AYSFY++Y++ MGF TA  +SRRS+ ++EFIDAKF+C+RYG K++ D
Sbjct: 69  EPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYD 128

Query: 63  DAIN----------------PRPSPKIGCKASMHVKRKQNGKCIPSKYV 96
            + N                 R   K  CKASMHVKR+ +GK +   +V
Sbjct: 129 KSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFV 177

HSP 2 Score: 81.6 bits (200), Expect = 1.1e-15
Identity = 48/118 (40.68%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 75  CKASMHVKRKQNGKCIPSKYVLQRWTNTATSRNPINEKLDEVQCKVRRFNDLCRRAIILG 134
           C+ +++V +  +   IPS+Y+L+RWT  A SR+   E   ++Q ++ R+NDLC RA+ L 
Sbjct: 589 CRHTLNVLQCCHLSSIPSQYILKRWTKDAKSRHFSGEP-QQLQTRLLRYNDLCERALKLN 648

Query: 135 EEGSLSQESYDIALSAINEALKQCATVSRSNSAENDVRPDNSGILVFGIEEDNQCSSS 193
           EE SLSQESY+IA  AI  A+  CA ++ S  +  DV    +  L+  +EEDN   S+
Sbjct: 649 EEASLSQESYNIAFLAIEGAIGNCAGINTSGRSLPDVVTSPTQGLI-SVEEDNHSRSA 704

[Close]

BLAST of Cp4.1LG19g05250 vs. TAIR 10
Match: AT3G22170.2 (far-red elongated hypocotyls 3 )

HSP 1 Score: 101.7 bits (252), Expect = 1.1e-21
Identity = 52/109 (47.71%), Postives = 69/109 (63.30%), Query Frame = 0


Query: 3   EPCPGMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQSD 62
           EP  GMEFESH  AYSFY++Y++ MGF TA  +SRRS+ ++EFIDAKF+C+RYG K++ D
Sbjct: 69  EPLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYD 128

Query: 63  DAIN----------------PRPSPKIGCKASMHVKRKQNGKCIPSKYV 96
            + N                 R   K  CKASMHVKR+ +GK +   +V
Sbjct: 129 KSFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFV 177

HSP 2 Score: 81.6 bits (200), Expect = 1.1e-15
Identity = 48/118 (40.68%), Postives = 73/118 (61.86%), Query Frame = 0


Query: 75  CKASMHVKRKQNGKCIPSKYVLQRWTNTATSRNPINEKLDEVQCKVRRFNDLCRRAIILG 134
           C+ +++V +  +   IPS+Y+L+RWT  A SR+   E   ++Q ++ R+NDLC RA+ L 
Sbjct: 589 CRHTLNVLQCCHLSSIPSQYILKRWTKDAKSRHFSGEP-QQLQTRLLRYNDLCERALKLN 648

Query: 135 EEGSLSQESYDIALSAINEALKQCATVSRSNSAENDVRPDNSGILVFGIEEDNQCSSS 193
           EE SLSQESY+IA  AI  A+  CA ++ S  +  DV    +  L+  +EEDN   S+
Sbjct: 649 EEASLSQESYNIAFLAIEGAIGNCAGINTSGRSLPDVVTSPTQGLI-SVEEDNHSRSA 704

[Close]

BLAST of Cp4.1LG19g05250 vs. TAIR 10
Match: AT2G32250.1 (FAR1-related sequence 2 )

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-21
Identity = 46/89 (51.69%), Postives = 65/89 (73.03%), Query Frame = 0


Query: 7   GMEFESHENAYSFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQSDDAIN 66
           GM+FES E AY FYR+YA+++GFG    +SRRS+ S +FID K +C+R+G K++   AIN
Sbjct: 41  GMDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGTKREKATAIN 100

Query: 67  PRPSPKIGCKASMHVKRKQNGKCIPSKYV 96
           PR  PK GCKA +H+KRK++ K +   +V
Sbjct: 101 PRSCPKTGCKAGLHMKRKEDEKWVIYNFV 129

HSP 2 Score: 67.4 bits (163), Expect = 2.2e-11
Identity = 35/100 (35.00%), Postives = 57/100 (57.00%), Query Frame = 0


Query: 75  CKASMHVKRKQNGKCIPSKYVLQRWTNTATSRNPINEKLDEVQCKVRRFNDLCRRAIILG 134
           CK ++ V +  +   +PS+Y+L+RW+    ++   N+K   +  ++ RF+DLCRR + LG
Sbjct: 524 CKHAILVLQSADVSRVPSQYILKRWSKKGNNKEDKNDKCATIDNRMARFDDLCRRFVKLG 583

Query: 135 EEGSLSQESYDIALSAINEALKQCATVSRSNSAENDVRPD 175
              SLS E+   AL  + E +K C  VS  NS++    PD
Sbjct: 584 VVASLSDEACKTALKLLEETVKHC--VSMDNSSKFPSEPD 621

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g05250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NQJ7	1.5e-33	85.19	Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana OX=3702 GN=FRS4 PE=2 SV=...	[more]
Q9LIE5	1.5e-20	47.71	Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana OX=3702 GN=FHY3 PE...	[more]
Q3EBQ3	4.3e-20	51.69	Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=FRS2 PE=1 SV=...	[more]
Q9SWG3	4.0e-18	48.96	Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=FAR1 PE=1...	[more]
Q5UBY2	9.3e-15	45.54	Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=FRS1 PE=1 SV=...	[more]

BLAST of Cp4.1LG19g05250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023517944.1	8.39e-137	39.70	protein FAR1-RELATED SEQUENCE 4 [Cucurbita pepo subsp. pepo] >XP_023517945.1 pro...	[more]
XP_023003308.1	1.33e-135	39.43	protein FAR1-RELATED SEQUENCE 4 [Cucurbita maxima] >XP_023003309.1 protein FAR1-...	[more]
XP_022926687.1	3.76e-135	39.43	protein FAR1-RELATED SEQUENCE 4 [Cucurbita moschata] >XP_022926688.1 protein FAR...	[more]
KAG7026381.1	2.56e-133	39.17	Protein FAR1-RELATED SEQUENCE 4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6594377.1	3.35e-133	39.17	Protein FAR1-RELATED SEQUENCE 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG19g05250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KSY6	6.45e-136	39.43	Protein FAR1-RELATED SEQUENCE OS=Cucurbita maxima OX=3661 GN=LOC111496956 PE=3 S...	[more]
A0A6J1ELU9	1.82e-135	39.43	Protein FAR1-RELATED SEQUENCE OS=Cucurbita moschata OX=3662 GN=LOC111433743 PE=3...	[more]
A0A1S4DTL1	5.26e-102	76.58	Protein FAR1-RELATED SEQUENCE OS=Cucumis melo OX=3656 GN=LOC103484243 PE=3 SV=1	[more]
A0A1S3AYS5	1.23e-101	76.58	Protein FAR1-RELATED SEQUENCE OS=Cucumis melo OX=3656 GN=LOC103484243 PE=3 SV=1	[more]
A0A0A0KIK5	4.57e-98	75.78	Protein FAR1-RELATED SEQUENCE OS=Cucumis sativus OX=3659 GN=Csa_6G538640 PE=3 SV...	[more]

BLAST of Cp4.1LG19g05250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76320.1	1.1e-34	85.19	FAR1-related sequence 4	[more]
AT1G76320.2	1.1e-34	85.19	FAR1-related sequence 4	[more]
AT3G22170.1	1.1e-21	47.71	far-red elongated hypocotyls 3	[more]
AT3G22170.2	1.1e-21	47.71	far-red elongated hypocotyls 3	[more]
AT2G32250.1	3.1e-21	51.69	FAR1-related sequence 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004330	FAR1 DNA binding domain	PFAM	PF03101	FAR1	coord: 18..89 e-value: 7.0E-20 score: 71.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..241
None	No IPR available	PANTHER	PTHR31669:SF42	PROTEIN FAR1-RELATED SEQUENCE 4	coord: 2..88 coord: 90..253
IPR031052	FHY3/FAR1 family	PANTHER	PTHR31669	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	coord: 2..88 coord: 90..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g05250.1	Cp4.1LG19g05250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019752	carboxylic acid metabolic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0030151	molybdenum ion binding
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0008270	zinc ion binding