Cp4.1LG19g04580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g04580
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Ras-related protein Rab-8A
Location	Cp4.1LG19: 3355004 .. 3359382 (+)
RNA-Seq Expression	Cp4.1LG19g04580
Synteny	Cp4.1LG19g04580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCGTTAGGGACCTTGGCTCTGTATAAGATAGCTACTGTGAGATTACATGTAGAATATGTTGTAATTTGTTTGATAATGTAAGGTGGTCGGTGATGATGCTGCTTTAATATTTTTGAATCTGCATCGTGCTTCCATTTCTTTTTGAGAGCGCCATGTGTGTCGAGTTTTGATGTTTAAGTCCGGAATGGAGTCTTTCTTCATGTTATGTCTTATATAAACTTTGTAGGTGTGGGGAAGAGTTGCCTTCTTTTGCGTTTCTCGGATGGTTCATTTACTACAAGTTTCATCACAACCATTGGGTAGGTGCTTGTTGAACTACAACTGTTATTTGTACGTGGTTTTCCCACATTGTTCTTGATTTGAGTAGGCTGAACGTTCTTCGACAGCATTGATTTTAAGATAAGGACCATAGAGCTGGATGGAAAAAGGATCAAGTTGCAAATTTGGGATACTGCTGGACAGGAGCGATTTAGAACAATTACAACTGGTTAGTGTCAGAACTGAAAGCTAAATTCATTATCTTGTGCTGTTGTTGTGATATTGTTGGGGTAGTGACCTAGGAATGCGTATATTTTCTTTAGAAATTGTCTTAGGTTGGAATAAAAGATCTCAATATCTTTCGTCAGTGTTTGGTATATCTAAGTTTATGATCAAGCTTAATAAATCTATTGTTGTTGTACCTACTATGTAGCTCAATTGGTCGAGTTATTAGAAACCTCCCTTATAGGTTTAGGGTTCAAGTTCCCACTCCAATTGAATTCTTTGGGAAAACCCCCCTTGAATCTGGATCCTTATTAGGTATTTTAATTAGTTGCATGTTGAGACCTTGCCTCCTTGTTGTCTATCAAATTTTAGTTTTCAGTATCCCACTGTCACATGACCTTAAATATTCTTTCATTTTTCTCAATGAAAGTTTGATTTCTTACCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANTGATTTATATTTTCATCGAAATAATAGATGAACACTTGCATTTTAAAGTTTAAGAGAAAACTGCAAAACCACCACTGAATTATAGATTGTTATATTGGTGTCACCTCAACTTTAACATTGATAGCATGTGTCTTGCCTTGGTCCAATATTTTTTACTGAAATCGCATAATGTAACCATTGCCTTATCTCAAGCAGGCTTCTTAGTCCATGTAAGAGTCCAGTTCAATGGTTCAAGTACAATTATTTTTCTTCATTTGAGCGGTTGAGAAGTCTGCTCAATATGAGCGTGGTGGGACGGCTGCCCTACTTTATCTCTATTGGCCATTCTTTGATGATTGATGCCAATTCTGTAAACCATACTCTCTGCTAGAGCCAACCCAAAAAATGAATAGGACCTTGGTTAATTACTTAATCAACTATATTTTATTGTTACAATTTTCTTTTTGTTGTGGTAAAACTAACAATTATTTTGAAGTATATATTGCACATTATATATGATTTAGCTTGTTGTCCAATTATCAATGATATTTTAGTTCTAAAATTTAAAATAATATTTACATAATTAATATTTAAGTTTTAAAATTTTCTTGACTATAAACTTGAGGGAACATAGTTGCTATAATTATAAGTTCAAGGATTTAACTTTGCGGTGATGATTTTGTGCATTTTATGAGCTTCCACTTTTAGATTTATAGTGATACGACTTGGTTGCTACATTTTTGCAACTTTTGGTTTAAGATTAATCCATCCATACAATGTATGGTCAATTTTTGGATTCTTCCCCAAGTTTAACTATTTCTTCACTTCTTGATCCTCTGCAGCTTATTATCGTGGAGCCATGGGTATTTTGCTTGTGTATGATGTAACGGATGAGTCCTCCTTTAACAGTAATATTCTTTCCTTACTTTTTTTAGCTTCAGATGTTATTGTGGTTTAGTGACTATCTCTTTGCGAGTCTCTGATTCCCTGTATCCCTTTGGCCTTCACCATGATATTTGAAAAGATCGAAATGCTTTTCTCAGTGCCACTGTATGTATTTGTATTGGAGTTATATTTTGGAGATAAAACTTCTGTAGACGATGAATCTTCTAAGCTTCTCCAAGCTTTATGAACTAAGCTGATTTCTTTCTGCAGACATTAGAAACTGGATTCGTAACATTGAACAACATGCTTCTGACAATGTTAACAAAATACTGGTGGGTAACAAGGCTGACATGGATGAGAGCAAAAGGGTATGCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTGTCTTCCTGCCTGTGTTTTCCATGTCAGTTGACATGTTTTTGACAAGAATATTCTTTCAGGCTGTCCCCACCTCAAAGGGTCAAGCTCTTGCAGATGAATATGGCATCAAGTTCTTTGAGACAGTATGTTACACTTGTTAGCTTGGAAAATTATTATATAATATCTTGTGGACATTCTATTCTAAAGATCTTATGTTTTACAGAGTGCCAAGACAAACTTAAATGTGGAAGAAGTTTTCTTCTCAATAGCTAGGGACATTAAACAAAGACTCGCTGATACTGATTCAAAATCCGAGGTATGGTCATTTAAATTACTAGGTCGGCTCAATTCTCAAGTATACTTCTTTACCAATCCTTTTGCTTAAAAGAAGTTAAAATTATTGTTCAACAGTGTTTGTTGATTATTTTTTAAAAAATTTTTAATTACAAATTCATAATAATGTGGAAAAAAAGTTGCTTAAAGCTTTCCAGGAGGTTCCTATCCAAAAAAAGGTTTTGGAGGAGGTGTACGGAGAGTCCTCAACTTAAATGAGAAAAAATTACAAGAAACTTGTTCATCTAAAAGTACTTGGAGATGATTGTAGTCGCCTAATCTAAATATATATATATATATATATATATATTTTGTAATAGCCCCTGCTAGCAGATATTGCCCGTTACATATCGCGGTCAGTCTCACGATTTTAAATACGTCTGTTAGGAAGAGGTCTTTTACACCCTTATAAGGAATGGTTTGTTTCCCTCTCCAACCGATGTGATATCTTACAATTCACCCCCCATGGGGGCCCAACGTCCTTGCTGGCACACTGCTCGGTGTCTCTCTGATATCATTTGTGATAGCCGAAGCCCACCGCTAGCAGATACTGTCCGCTTTTGCTCATTACGTATCGCCGTCAACCTCACGGTTTTAAAATGCGTCTGTTAGGGAGAGGTTTTTACATCCTTATAAGGAATGCTTCATTTCCCTCTCCCACCGACGTGACGTGGGATCTCACATCTTTTGCCTAATGAAAAGTAATTGAAAAGTAATTGAGATATTCAACACCTACTTTTATGTAAAATCTAAAGTATCCTACTAGTTTAATTATTGTTTTCCACATAAAAAAGGTATCACGCTAGTTGCATTTTTTTACTTAGCTTTCTTATGATATCGAGTTTCATTTGTCTTGGAAACCGCCAAATTTTCTTATATTTTAACAAATTGTTATTACTTTGCTTTTTCTTATATTTTAACAAATTGTTATTACTTTGCTTTCATCTGATACTTTTATGAGTTTGTTGTGCCTTATGATTACGTAAGTTTGCACAGTACATTTAAGTTCTACTTCTGGATGTTGCAGCCTCAGACAATCAAGATTAATCAAGCAGATCAGGGGGCAGGGGCTGCACAAGCTGCTCAAAAATCGACATGCTGTGGTTCTTAAGCAAGATGCGTTGATGGGATCTTACGGTACACTCTTAAGGAACCATTTGTGGAAACTATCGATCGGTCCTGTTACAACTATATCACTGCTGCCTGTATCAGTTCTCATTATCATTTTTTTTTCCCATCTAGTGCTAATCTTTGTGTGAATGACAACAGACAGATATCCTTATTTGAGAAATTAATTATATATTAGTTGATTTTTTACAAACACTCTTTACCTCGTTCTTCTATGAATATTATTTGATCCAGCGTGGAAAAGAAATAGCTGCCATATTTGGAAATTGAAATGAAAGGCGTTCTTTATGGTGTGATTATCTGTTGGATCACTTGGTGAGAAACACACCTCGAGTAAGCCCGAACTAAATATGAGCTGCTGCTTTGATTGTCCTCTCTCTCTTGTTCAGATATTGATATGTTTTAGCAACCTTGTTCAATACTTGTGCTTAAGTTTGTTTTCGCAGCTTTGCCTAAATGGGATAAAATGAGCGAGCTCATATGATTGCCGGCAAATGGAAGTGGTCCACATCACCACACCAGGTGCCATTTAAAGTCCCATCTCTTCTAATTCCATAGAAAATTTCCTTCCCTTGCTTGCAATTGCATAACATCCATGTTTTCCCTTGACCCCACCCCCACTTTCTCATTTTGGAATAGCCTGGAATCACTGCATAAA

mRNA sequence

ATGGCTTCGTTAGGGACCTTGGCTCTGTATAAGATAGCTACTGTGTGGGGAAGAGTTGCCTTCTTTTGCGTTTCTCGGATGGTTCATTTACTACAAGTTTCATCACAACCATTGGGTAGCATTGATTTTAAGATAAGGACCATAGAGCTGGATGGAAAAAGGATCAAGTTGCAAATTTGGGATACTGCTGGACAGGAGCGATTTAGAACAATTACAACTGCTTATTATCGTGGAGCCATGGGTATTTTGCTTGTGTATGATGTAACGGATGAGTCCTCCTTTAACAACATTAGAAACTGGATTCGTAACATTGAACAACATGCTTCTGACAATGTTAACAAAATACTGGTGGGTAACAAGGCTGACATGGATGAGAGCAAAAGGGCTGTCCCCACCTCAAAGGGTCAAGCTCTTGCAGATGAATATGGCATCAAGTTCTTTGAGACAAGTGCCAAGACAAACTTAAATGTGGAAGAAGTTTTCTTCTCAATAGCTAGGGACATTAAACAAAGACTCGCTGATACTGATTCAAAATCCGAGCCTCAGACAATCAAGATTAATCAAGCAGATCAGGGGGCAGGGGCTGCACAAGCTGCTCAAAAATCGACATGCTGTGGTTCTTAAGCAAGATGCGTTGATGGGATCTTACGGTACACTCTTAAGGAACCATTTGTGGAAACTATCGATCGGTCCTGTTACAACTATATCACTGCTGCCTGTATCAGTTCTCATTATCATTTTTTTTTCCCATCTAGTGCTAATCTTTGTGTGAATGACAACAGACAGATATCCTTATTTGAGAAATTAATTATATATTAGTTGATTTTTTACAAACACTCTTTACCTCGTTCTTCTATGAATATTATTTGATCCAGCGTGGAAAAGAAATAGCTGCCATATTTGGAAATTGAAATGAAAGGCGTTCTTTATGGTGTGATTATCTGTTGGATCACTTGGTGAGAAACACACCTCGACTTTGCCTAAATGGGATAAAATGAGCGAGCTCATATGATTGCCGGCAAATGGAAGTGGTCCACATCACCACACCAGGTGCCATTTAAAGTCCCATCTCTTCTAATTCCATAGAAAATTTCCTTCCCTTGCTTGCAATTGCATAACATCCATGTTTTCCCTTGACCCCACCCCCACTTTCTCATTTTGGAATAGCCTGGAATCACTGCATAAA

Coding sequence (CDS)

ATGGCTTCGTTAGGGACCTTGGCTCTGTATAAGATAGCTACTGTGTGGGGAAGAGTTGCCTTCTTTTGCGTTTCTCGGATGGTTCATTTACTACAAGTTTCATCACAACCATTGGGTAGCATTGATTTTAAGATAAGGACCATAGAGCTGGATGGAAAAAGGATCAAGTTGCAAATTTGGGATACTGCTGGACAGGAGCGATTTAGAACAATTACAACTGCTTATTATCGTGGAGCCATGGGTATTTTGCTTGTGTATGATGTAACGGATGAGTCCTCCTTTAACAACATTAGAAACTGGATTCGTAACATTGAACAACATGCTTCTGACAATGTTAACAAAATACTGGTGGGTAACAAGGCTGACATGGATGAGAGCAAAAGGGCTGTCCCCACCTCAAAGGGTCAAGCTCTTGCAGATGAATATGGCATCAAGTTCTTTGAGACAAGTGCCAAGACAAACTTAAATGTGGAAGAAGTTTTCTTCTCAATAGCTAGGGACATTAAACAAAGACTCGCTGATACTGATTCAAAATCCGAGCCTCAGACAATCAAGATTAATCAAGCAGATCAGGGGGCAGGGGCTGCACAAGCTGCTCAAAAATCGACATGCTGTGGTTCTTAA

Protein sequence

MASLGTLALYKIATVWGRVAFFCVSRMVHLLQVSSQPLGSIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQTIKINQADQGAGAAQAAQKSTCCGS

Homology

[Close]

BLAST of Cp4.1LG19g04580 vs. ExPASy Swiss-Prot
Match: O24466 (Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 5.6e-83
Identity = 154/167 (92.22%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 41  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 100
           IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW
Sbjct: 50  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109

Query: 101 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 160
           IRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEV
Sbjct: 110 IRNIEQHASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEV 169

Query: 161 FFSIARDIKQRLADTDSKSEPQTIKINQADQGAGAAQAAQKSTCCGS 208
           FFSIA+DIKQRLADTD+++EPQTIKINQ+DQGAG +QA QKS CCG+
Sbjct: 170 FFSIAKDIKQRLADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

[Close]

BLAST of Cp4.1LG19g04580 vs. ExPASy Swiss-Prot
Match: P28186 (Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 2.1e-82
Identity = 154/167 (92.22%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 41  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 100
           IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW
Sbjct: 50  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109

Query: 101 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 160
           IRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEV
Sbjct: 110 IRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEV 169

Query: 161 FFSIARDIKQRLADTDSKSEPQTIKINQADQGAGAAQAAQKSTCCGS 208
           FFSI RDIKQRL+DTDS++EP TIKI+Q DQ AGA QA QKS CCG+
Sbjct: 170 FFSIGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

[Close]

BLAST of Cp4.1LG19g04580 vs. ExPASy Swiss-Prot
Match: Q39433 (Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 3.0e-76
Identity = 150/168 (89.29%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 41  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 100
           IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW
Sbjct: 50  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109

Query: 101 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 160
           IRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEV
Sbjct: 110 IRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEV 169

Query: 161 FFSIARDIKQRLADTDSKSEPQ-TIKINQADQGAGAAQAAQKSTCCGS 208
           FFSIARDIKQRLAD+D++ E Q +I I  ADQ     QAA KS CCGS
Sbjct: 170 FFSIARDIKQRLADSDTRQEAQPSITIKPADQSGN--QAAAKSACCGS 215

[Close]

BLAST of Cp4.1LG19g04580 vs. ExPASy Swiss-Prot
Match: Q9LZD4 (Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.6e-74
Identity = 141/165 (85.45%), Postives = 153/165 (92.73%), Query Frame = 0


Query: 41  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 100
           IDFKIRT+ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW
Sbjct: 50  IDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109

Query: 101 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 160
           ++NIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVE V
Sbjct: 110 MKNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVENV 169

Query: 161 FFSIARDIKQRLADTDSKSEPQTIKINQADQGAGAAQAAQKSTCC 206
           F SIA+DIKQRL +TD+K+EPQ IKI + D  A ++  A+KS CC
Sbjct: 170 FMSIAKDIKQRLTETDTKAEPQGIKITKQDT-AASSSTAEKSACC 213

[Close]

BLAST of Cp4.1LG19g04580 vs. ExPASy Swiss-Prot
Match: Q9SF91 (Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.2e-72
Identity = 138/166 (83.13%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 41  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 100
           IDFKIRT+ELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW
Sbjct: 50  IDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109

Query: 101 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 160
           ++NIEQHASD+VNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTN NVE+V
Sbjct: 110 MKNIEQHASDSVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQV 169

Query: 161 FFSIARDIKQRLADTDSKSEPQTIKINQADQG-AGAAQAAQKSTCC 206
           F SIA+DIKQRL ++D+K+EPQ IKI + D   A ++   +KS CC
Sbjct: 170 FLSIAKDIKQRLTESDTKAEPQGIKITKQDANKASSSSTNEKSACC 215

[Close]

BLAST of Cp4.1LG19g04580 vs. NCBI nr
Match: MBA0767958.1 (hypothetical protein [Gossypium trilobum] >MBA0800809.1 hypothetical protein [Gossypium harknessii])

HSP 1 Score: 347 bits (889), Expect = 1.05e-118
Identity = 179/200 (89.50%), Postives = 184/200 (92.00%), Query Frame = 0


Query: 7   LALYKIATVWGRVAFFCVSRMVHLLQVSSQPLGSIDFKIRTIELDGKRIKLQIWDTAGQE 66
           L  + +  VW RVA FCV RM H LQV S+ LG IDFKIRTIELDGKRIKLQIWDTAGQE
Sbjct: 39  LCYHAVGQVWVRVACFCVFRMAHSLQVLSRQLGRIDFKIRTIELDGKRIKLQIWDTAGQE 98

Query: 67  RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 126
           RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES
Sbjct: 99  RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 158

Query: 127 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQTIKI 186
           KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSK+EPQ IKI
Sbjct: 159 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQAIKI 218

Query: 187 NQADQGAGAAQAAQKSTCCG 206
           NQ DQGAGAA AAQKS+CCG
Sbjct: 219 NQQDQGAGAAAAAQKSSCCG 238

[Close]

BLAST of Cp4.1LG19g04580 vs. NCBI nr
Match: PPD73689.1 (hypothetical protein GOBAR_DD29378 [Gossypium barbadense])

HSP 1 Score: 343 bits (879), Expect = 1.10e-117
Identity = 177/192 (92.19%), Postives = 180/192 (93.75%), Query Frame = 0


Query: 15  VWGRVAFFCVSRMVHLLQVSSQPLGSIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 74
           VW RVA FCV R  H LQV S+ LG IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA
Sbjct: 14  VWVRVACFCVFRTAHSLQVLSRQLGRIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 73

Query: 75  YYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSK 134
           YYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSK
Sbjct: 74  YYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSK 133

Query: 135 GQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQTIKINQADQGAG 194
           GQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSK+EPQ IKINQ DQGAG
Sbjct: 134 GQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQAIKINQQDQGAG 193

Query: 195 AAQAAQKSTCCG 206
           AA AAQKS+CCG
Sbjct: 194 AAAAAQKSSCCG 205

[Close]

BLAST of Cp4.1LG19g04580 vs. NCBI nr
Match: MBA0740221.1 (hypothetical protein [Gossypium gossypioides])

HSP 1 Score: 340 bits (873), Expect = 2.86e-116
Identity = 177/200 (88.50%), Postives = 182/200 (91.00%), Query Frame = 0


Query: 7   LALYKIATVWGRVAFFCVSRMVHLLQVSSQPLGSIDFKIRTIELDGKRIKLQIWDTAGQE 66
           L  + +  VW RVA F V RM H LQV S+ LG IDFKIRTIELDGKRIKLQIWDTAGQE
Sbjct: 39  LCYHAVGQVWVRVACFYVFRMAHSLQVLSRQLGRIDFKIRTIELDGKRIKLQIWDTAGQE 98

Query: 67  RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 126
           RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES
Sbjct: 99  RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 158

Query: 127 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQTIKI 186
           KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSK+EPQ IKI
Sbjct: 159 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQAIKI 218

Query: 187 NQADQGAGAAQAAQKSTCCG 206
           NQ DQGAG A AAQKS+CCG
Sbjct: 219 NQQDQGAGPAAAAQKSSCCG 238

[Close]

BLAST of Cp4.1LG19g04580 vs. NCBI nr
Match: GAU34705.1 (hypothetical protein TSUD_29460 [Trifolium subterraneum])

HSP 1 Score: 338 bits (868), Expect = 2.11e-115
Identity = 171/193 (88.60%), Postives = 182/193 (94.30%), Query Frame = 0


Query: 15  VWGRVAFFCVSRMVHLLQVSSQPLGSIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 74
           VW +V F+CV +MVH   V S P GSIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA
Sbjct: 54  VWVKVVFYCVFQMVHSQLVLSLPSGSIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 113

Query: 75  YYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSK 134
           YYRGAMGILLVYDVTDESSFNNI+NWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSK
Sbjct: 114 YYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSK 173

Query: 135 GQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQTIKINQADQGAG 194
           GQALADEYGIKFFETSAKTN+NV+EVFFSIARDIKQRLA+TDSK+EPQT+KINQ DQGAG
Sbjct: 174 GQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQRLAETDSKAEPQTLKINQPDQGAG 233

Query: 195 AAQAAQKSTCCGS 207
           +AQA Q+STCCGS
Sbjct: 234 SAQATQRSTCCGS 246

[Close]

BLAST of Cp4.1LG19g04580 vs. NCBI nr
Match: KAE9461143.1 (hypothetical protein C3L33_06946, partial [Rhododendron williamsianum])

HSP 1 Score: 337 bits (864), Expect = 6.04e-115
Identity = 177/205 (86.34%), Postives = 182/205 (88.78%), Query Frame = 0


Query: 15  VWGRVAFFCVSRMVHLLQVSSQPLG------------SIDFKIRTIELDGKRIKLQIWDT 74
           VW RVAFFCVS+MV L  V S PLG            SIDFKIRTIELDGKRIKLQIWDT
Sbjct: 32  VWARVAFFCVSQMVPLQPVLSPPLGVPLTFLSSLPTYSIDFKIRTIELDGKRIKLQIWDT 91

Query: 75  AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 134
           AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD
Sbjct: 92  AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 151

Query: 135 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQ 194
           MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQRLADTDS++EPQ
Sbjct: 152 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLADTDSRAEPQ 211

Query: 195 TIKINQADQGAGAAQAAQKSTCCGS 207
           TI+INQ D GAGA Q AQKS CCGS
Sbjct: 212 TIRINQPDTGAGAGQVAQKSACCGS 236

[Close]

BLAST of Cp4.1LG19g04580 vs. ExPASy TrEMBL
Match: A0A7J9E554 (Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_016804 PE=4 SV=1)

HSP 1 Score: 347 bits (889), Expect = 5.07e-119
Identity = 179/200 (89.50%), Postives = 184/200 (92.00%), Query Frame = 0


Query: 7   LALYKIATVWGRVAFFCVSRMVHLLQVSSQPLGSIDFKIRTIELDGKRIKLQIWDTAGQE 66
           L  + +  VW RVA FCV RM H LQV S+ LG IDFKIRTIELDGKRIKLQIWDTAGQE
Sbjct: 39  LCYHAVGQVWVRVACFCVFRMAHSLQVLSRQLGRIDFKIRTIELDGKRIKLQIWDTAGQE 98

Query: 67  RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 126
           RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES
Sbjct: 99  RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 158

Query: 127 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQTIKI 186
           KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSK+EPQ IKI
Sbjct: 159 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQAIKI 218

Query: 187 NQADQGAGAAQAAQKSTCCG 206
           NQ DQGAGAA AAQKS+CCG
Sbjct: 219 NQQDQGAGAAAAAQKSSCCG 238

[Close]

BLAST of Cp4.1LG19g04580 vs. ExPASy TrEMBL
Match: A0A7J9GT97 (Uncharacterized protein OS=Gossypium harknessii OX=34285 GN=Gohar_011222 PE=4 SV=1)

HSP 1 Score: 347 bits (889), Expect = 5.07e-119
Identity = 179/200 (89.50%), Postives = 184/200 (92.00%), Query Frame = 0


Query: 7   LALYKIATVWGRVAFFCVSRMVHLLQVSSQPLGSIDFKIRTIELDGKRIKLQIWDTAGQE 66
           L  + +  VW RVA FCV RM H LQV S+ LG IDFKIRTIELDGKRIKLQIWDTAGQE
Sbjct: 39  LCYHAVGQVWVRVACFCVFRMAHSLQVLSRQLGRIDFKIRTIELDGKRIKLQIWDTAGQE 98

Query: 67  RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 126
           RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES
Sbjct: 99  RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 158

Query: 127 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQTIKI 186
           KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSK+EPQ IKI
Sbjct: 159 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQAIKI 218

Query: 187 NQADQGAGAAQAAQKSTCCG 206
           NQ DQGAGAA AAQKS+CCG
Sbjct: 219 NQQDQGAGAAAAAQKSSCCG 238

[Close]

BLAST of Cp4.1LG19g04580 vs. ExPASy TrEMBL
Match: A0A7J9BVI6 (Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_013440 PE=4 SV=1)

HSP 1 Score: 340 bits (873), Expect = 1.38e-116
Identity = 177/200 (88.50%), Postives = 182/200 (91.00%), Query Frame = 0


Query: 7   LALYKIATVWGRVAFFCVSRMVHLLQVSSQPLGSIDFKIRTIELDGKRIKLQIWDTAGQE 66
           L  + +  VW RVA F V RM H LQV S+ LG IDFKIRTIELDGKRIKLQIWDTAGQE
Sbjct: 39  LCYHAVGQVWVRVACFYVFRMAHSLQVLSRQLGRIDFKIRTIELDGKRIKLQIWDTAGQE 98

Query: 67  RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 126
           RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES
Sbjct: 99  RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDES 158

Query: 127 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQTIKI 186
           KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSK+EPQ IKI
Sbjct: 159 KRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQAIKI 218

Query: 187 NQADQGAGAAQAAQKSTCCG 206
           NQ DQGAG A AAQKS+CCG
Sbjct: 219 NQQDQGAGPAAAAQKSSCCG 238

[Close]

BLAST of Cp4.1LG19g04580 vs. ExPASy TrEMBL
Match: A0A2Z6NFR4 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_29460 PE=4 SV=1)

HSP 1 Score: 338 bits (868), Expect = 1.02e-115
Identity = 171/193 (88.60%), Postives = 182/193 (94.30%), Query Frame = 0


Query: 15  VWGRVAFFCVSRMVHLLQVSSQPLGSIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 74
           VW +V F+CV +MVH   V S P GSIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA
Sbjct: 54  VWVKVVFYCVFQMVHSQLVLSLPSGSIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTA 113

Query: 75  YYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSK 134
           YYRGAMGILLVYDVTDESSFNNI+NWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSK
Sbjct: 114 YYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSK 173

Query: 135 GQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQTIKINQADQGAG 194
           GQALADEYGIKFFETSAKTN+NV+EVFFSIARDIKQRLA+TDSK+EPQT+KINQ DQGAG
Sbjct: 174 GQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQRLAETDSKAEPQTLKINQPDQGAG 233

Query: 195 AAQAAQKSTCCGS 207
           +AQA Q+STCCGS
Sbjct: 234 SAQATQRSTCCGS 246

[Close]

BLAST of Cp4.1LG19g04580 vs. ExPASy TrEMBL
Match: A0A6A4LPD5 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_06946 PE=4 SV=1)

HSP 1 Score: 337 bits (864), Expect = 2.93e-115
Identity = 177/205 (86.34%), Postives = 182/205 (88.78%), Query Frame = 0


Query: 15  VWGRVAFFCVSRMVHLLQVSSQPLG------------SIDFKIRTIELDGKRIKLQIWDT 74
           VW RVAFFCVS+MV L  V S PLG            SIDFKIRTIELDGKRIKLQIWDT
Sbjct: 32  VWARVAFFCVSQMVPLQPVLSPPLGVPLTFLSSLPTYSIDFKIRTIELDGKRIKLQIWDT 91

Query: 75  AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 134
           AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD
Sbjct: 92  AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 151

Query: 135 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQ 194
           MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVE+VFFSIARDIKQRLADTDS++EPQ
Sbjct: 152 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLADTDSRAEPQ 211

Query: 195 TIKINQADQGAGAAQAAQKSTCCGS 207
           TI+INQ D GAGA Q AQKS CCGS
Sbjct: 212 TIRINQPDTGAGAGQVAQKSACCGS 236

[Close]

BLAST of Cp4.1LG19g04580 vs. TAIR 10
Match: AT3G53610.1 (RAB GTPase homolog 8 )

HSP 1 Score: 308.5 bits (789), Expect = 4.0e-84
Identity = 154/167 (92.22%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 41  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 100
           IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW
Sbjct: 50  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109

Query: 101 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 160
           IRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEV
Sbjct: 110 IRNIEQHASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEV 169

Query: 161 FFSIARDIKQRLADTDSKSEPQTIKINQADQGAGAAQAAQKSTCCGS 208
           FFSIA+DIKQRLADTD+++EPQTIKINQ+DQGAG +QA QKS CCG+
Sbjct: 170 FFSIAKDIKQRLADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

[Close]

BLAST of Cp4.1LG19g04580 vs. TAIR 10
Match: AT3G53610.2 (RAB GTPase homolog 8 )

HSP 1 Score: 308.5 bits (789), Expect = 4.0e-84
Identity = 154/167 (92.22%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 41  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 100
           IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW
Sbjct: 50  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109

Query: 101 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 160
           IRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEV
Sbjct: 110 IRNIEQHASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEV 169

Query: 161 FFSIARDIKQRLADTDSKSEPQTIKINQADQGAGAAQAAQKSTCCGS 208
           FFSIA+DIKQRLADTD+++EPQTIKINQ+DQGAG +QA QKS CCG+
Sbjct: 170 FFSIAKDIKQRLADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

[Close]

BLAST of Cp4.1LG19g04580 vs. TAIR 10
Match: AT3G53610.3 (RAB GTPase homolog 8 )

HSP 1 Score: 308.5 bits (789), Expect = 4.0e-84
Identity = 154/167 (92.22%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 41  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 100
           IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW
Sbjct: 50  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109

Query: 101 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 160
           IRNIEQHASD+VNKILVGNKADMDESKRAVP SKGQALADEYG+KFFETSAKTNLNVEEV
Sbjct: 110 IRNIEQHASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEV 169

Query: 161 FFSIARDIKQRLADTDSKSEPQTIKINQADQGAGAAQAAQKSTCCGS 208
           FFSIA+DIKQRLADTD+++EPQTIKINQ+DQGAG +QA QKS CCG+
Sbjct: 170 FFSIAKDIKQRLADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT 216

[Close]

BLAST of Cp4.1LG19g04580 vs. TAIR 10
Match: AT5G59840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 308.1 bits (788), Expect = 5.2e-84
Identity = 156/167 (93.41%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 41  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 100
           IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW
Sbjct: 50  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109

Query: 101 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 160
           IRNIEQHASDNVNKILVGNKADMDESKRAVP SKGQALADEYGIKFFETSAKTNLNVEEV
Sbjct: 110 IRNIEQHASDNVNKILVGNKADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEV 169

Query: 161 FFSIARDIKQRLADTDSKSEPQTIKINQADQGAGAAQAAQKSTCCGS 208
           FFSIA+DIKQRLADTDS++EP TIKI+Q DQ AGA QA QKS CCGS
Sbjct: 170 FFSIAKDIKQRLADTDSRAEPATIKISQTDQAAGAGQATQKSACCGS 216

[Close]

BLAST of Cp4.1LG19g04580 vs. TAIR 10
Match: AT3G46060.1 (RAB GTPase homolog 8A )

HSP 1 Score: 306.6 bits (784), Expect = 1.5e-83
Identity = 154/167 (92.22%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 41  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 100
           IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW
Sbjct: 50  IDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNW 109

Query: 101 IRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEV 160
           IRNIEQHASDNVNKILVGNKADMDESKRAVPT+KGQALADEYGIKFFETSAKTNLNVEEV
Sbjct: 110 IRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEV 169

Query: 161 FFSIARDIKQRLADTDSKSEPQTIKINQADQGAGAAQAAQKSTCCGS 208
           FFSI RDIKQRL+DTDS++EP TIKI+Q DQ AGA QA QKS CCG+
Sbjct: 170 FFSIGRDIKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSACCGT 216

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g04580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24466	5.6e-83	92.22	Ras-related protein RABE1a OS=Arabidopsis thaliana OX=3702 GN=RABE1A PE=1 SV=1	[more]
P28186	2.1e-82	92.22	Ras-related protein RABE1c OS=Arabidopsis thaliana OX=3702 GN=RABE1C PE=1 SV=1	[more]
Q39433	3.0e-76	89.29	Ras-related protein RAB1BV OS=Beta vulgaris OX=161934 GN=RAB1BV PE=2 SV=1	[more]
Q9LZD4	1.6e-74	85.45	Ras-related protein RABE1d OS=Arabidopsis thaliana OX=3702 GN=RABE1D PE=1 SV=1	[more]
Q9SF91	1.2e-72	83.13	Ras-related protein RABE1e OS=Arabidopsis thaliana OX=3702 GN=RABE1E PE=1 SV=1	[more]

BLAST of Cp4.1LG19g04580 vs. NCBI nr


Match Name	E-value	Identity	Description
MBA0767958.1	1.05e-118	89.50	hypothetical protein [Gossypium trilobum] >MBA0800809.1 hypothetical protein [Go...	[more]
PPD73689.1	1.10e-117	92.19	hypothetical protein GOBAR_DD29378 [Gossypium barbadense]	[more]
MBA0740221.1	2.86e-116	88.50	hypothetical protein [Gossypium gossypioides]	[more]
GAU34705.1	2.11e-115	88.60	hypothetical protein TSUD_29460 [Trifolium subterraneum]	[more]
KAE9461143.1	6.04e-115	86.34	hypothetical protein C3L33_06946, partial [Rhododendron williamsianum]	[more]

BLAST of Cp4.1LG19g04580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J9E554	5.07e-119	89.50	Uncharacterized protein OS=Gossypium trilobum OX=34281 GN=Gotri_016804 PE=4 SV=1	[more]
A0A7J9GT97	5.07e-119	89.50	Uncharacterized protein OS=Gossypium harknessii OX=34285 GN=Gohar_011222 PE=4 SV...	[more]
A0A7J9BVI6	1.38e-116	88.50	Uncharacterized protein OS=Gossypium gossypioides OX=34282 GN=Gogos_013440 PE=4 ...	[more]
A0A2Z6NFR4	1.02e-115	88.60	Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_29460 PE=4 SV=...	[more]
A0A6A4LPD5	2.93e-115	86.34	Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3...	[more]

BLAST of Cp4.1LG19g04580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53610.1	4.0e-84	92.22	RAB GTPase homolog 8	[more]
AT3G53610.2	4.0e-84	92.22	RAB GTPase homolog 8	[more]
AT3G53610.3	4.0e-84	92.22	RAB GTPase homolog 8	[more]
AT5G59840.1	5.2e-84	93.41	Ras-related small GTP-binding family protein	[more]
AT3G46060.1	1.5e-83	92.22	RAB GTPase homolog 8A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 48..70 score: 57.68 coord: 146..168 score: 47.39 coord: 110..123 score: 51.25
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 4..204 e-value: 0.0014 score: 2.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 40..171 e-value: 1.9E-16 score: 70.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 31..171 e-value: 3.2E-71 score: 252.6
None	No IPR available	PANTHER	PTHR47980:SF5	BNAA07G37610D PROTEIN	coord: 40..205
None	No IPR available	PANTHER	PTHR47980	LD44762P	coord: 40..205
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..173 score: 9.034746
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..205 score: 29.201611
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 23..171 e-value: 4.1E-9 score: -2.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 41..169 e-value: 4.9E-50 score: 169.3
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..207 score: 18.266249
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 24..205 e-value: 4.3E-58 score: 197.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 33..189
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 42..161 e-value: 4.5E-22 score: 76.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g04580.1	Cp4.1LG19g04580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009306	protein secretion
biological_process	GO:0017157	regulation of exocytosis
biological_process	GO:0006904	vesicle docking involved in exocytosis
molecular_function	GO:0003925	G protein activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity