Cp4.1LG19g04550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTAAACCGAACAAGAAAGTGAAAGCTAAAGGGTAAGAACCATTTATAAAAGACGTGAAAAGGAAAAGGCAAAAGAATTATTCTCTTGATTTGCTCAATCTCTGACCGCTGGTAGTGTATGAGGTGTTAATTTGAGGTCCTTATCATAGTTTATCCGATATTTGTATGATGTTTACTATTCCTTTGATTCTCTATGCTTCTGCTCATGTCTGCTGCTTGCAGGCTACAGGGTGCCACACCACAGATTGATGCTACTGACCTTTTCTTTACTCGGCCACCACGACGGACGAGGAGAGATGCCTGCCCATTGCTGATGGTTGTACTCTGTCCCTGCTATTGGAGAATCATTGGGATACGAGACTTGCTTTGGCCTCTCCATCTACCGTAAAACTTCCCTTTTTGTCGACATTTGGAGTTGCATTTACATGAACATGGAGCATGGAATAGACTTCCAAAAAGAAAAAGGTCCCCTCCATTTTCATTGTTTATTTATAAAAAAAAAATTTAATTTGTGGGCGTTAATATTTATTGATTTTAAGGATAAAAACGTCATTTCAGTTTCTTTAGTTTTTTTTGGGCGATTCTATCGATTTCCTTTTGTTATTTTTTTTCTGTTCTTTTCTATCTGCTTTTTTCCTCTCAGCATCGAATCTGAACTTGGTTTTTATTCCAAACATTATCTTCTCCATGTTAAATTTATCTCAATTCTACCATTTTCTTCCAGTTCATCTTCATATGAATTGACTGAATATGGGTAATTGGATATCTCACTGTTCTCTAGCTTAATGAAGTGACTGAAATTCCAGTTCATAATATGAAAACAGGGAATAGACGTTGCCCTGGCCTTCTGTCGAGTTTGTGGGCCTCTGATGTCACTGCAGTACGAAAGTAGTCTCATTGTGGTCTTTTCTATCATCCCTTTTTCCCTGCCAATCAGAAAATGCTCGAAACAAATGGCAACCCCTCTCTTTCTTACTGTCTGTTCTCTAATGATTTGAATTCAATGTTTTTCTTCTTAACATTTTCCTCGCCTGCAGCCACCGCCTTTGGCGTCTCCTAGTATATCAAATCAAACACCTCGGTCTCAGCCAGCGCTTAGGAGGTCCAGCGTATTGATGGCTCAACAGGTCTCTCTCTCTCTCTCTCTGTCTCCGAGTTTCTTTACTTTGTATACTTCTGAATAATGAGCTGAATTTTTTTAAGTGAGAATTGATTTCTAAACCAGGACGACGGGTGGCCTTTGGGATTAAGACTACTAAATGCTAGAGTTGGATTGCTGGAAAACCGGGACTTTTCCGGATCAATCTCCTTCAACACTTTGCCCACTGGATCTCCAATCTCCTTCACGGACTCTTCAGATCTTGATTCTCAGGTATGTTCGTCTTGTTTTTTTCGTAGTAATCACGAATCTACACAATAGTATAATAGTGTCCGCTTCGCCAAAAAGCCTCGTATTAATGTAAATGTATTACTTACTTATAATAAAGGTATGCTCATCCCCTAAATTTGTGAATATAGGACTCCCTCTCCCAACCATCTTCTCCCCTTTTCTCTGCACTTTTTGTGTTGTAAATGGTCACAATTTGTCTTTTAACTTCTCCCGCTTTGTGTTCCGATTGATTGCAGTCAAGTGGGTCATTCCTCCATGCTAAAAGCATCAGTGGAGGTAGTCTAATAAGCGGTTCTGACATCGTGGAGCTCTCGAGAAGATCATCAAGAGTGGGAAGCACAGAAACCAGCTTAGGAGGATACAGAAAGAACGACTTCAAGTCCAAGCCATGGTTGTTTTCTCTTTGCTGTAAACTAAGCACCGACGCTGTGAGCGTCACCAGAACTCACTCGCTGGCTCACTTTCTGGAAGCGGAAAGGAGGAGAACCGCCGGTAATTGCCGGAGGAACCAGCTGAGAGCAATGATGCAAGGGCGGCCACGTCCCAATAATTTGTTGGCCAGCTGAAACACTCTCTTTAAGTGAGGTACTTGGGACCCTTCATTTTCTAGTTTGGTTATTTTCGTTTCTTCTCTCTTTTTGTGCATATTCGGATGGAGAGTGTTACTTTGTGGGTTCTGTTCATTTAAATTCGGAATATGAAAATTCTAGTTAATCTAAATGTAGGCCAAACGAGGTAATTGTTAGGTACTATTTTCTTTA CTTAAACCGAACAAGAAAGTGAAAGCTAAAGGGCTACAGGGTGCCACACCACAGATTGATGCTACTGACCTTTTCTTTACTCGGCCACCACGACGGACGAGGAGAGATGCCTGCCCATTGCTGATGCCACCGCCTTTGGCGTCTCCTAGTATATCAAATCAAACACCTCGGTCTCAGCCAGCGCTTAGGAGGTCCAGCGTATTGATGGCTCAACAGGACGACGGGTGGCCTTTGGGATTAAGACTACTAAATGCTAGAGTTGGATTGCTGGAAAACCGGGACTTTTCCGGATCAATCTCCTTCAACACTTTGCCCACTGGATCTCCAATCTCCTTCACGGACTCTTCAGATCTTGATTCTCAGTCAAGTGGGTCATTCCTCCATGCTAAAAGCATCAGTGGAGGTAGTCTAATAAGCGGTTCTGACATCGTGGAGCTCTCGAGAAGATCATCAAGAGTGGGAAGCACAGAAACCAGCTTAGGAGGATACAGAAAGAACGACTTCAAGTCCAAGCCATGGTTGTTTTCTCTTTGCTGTAAACTAAGCACCGACGCTGTGAGCGTCACCAGAACTCACTCGCTGGCTCACTTTCTGGAAGCGGAAAGGAGGAGAACCGCCGGTAATTGCCGGAGGAACCAGCTGAGAGCAATGATGCAAGGGCGGCCACGTCCCAATAATTTGTTGGCCAGCTGAAACACTCTCTTTAAGTGAGGTACTTGGGACCCTTCATTTTCTAGTTTGGTTATTTTCGTTTCTTCTCTCTTTTTGTGCATATTCGGATGGAGAGTGTTACTTTGTGGGTTCTGTTCATTTAAATTCGGAATATGAAAATTCTAGTTAATCTAAATGTAGGCCAAACGAGGTAATTGTTAGGTACTATTTTCTTTA CTTAAACCGAACAAGAAAGTGAAAGCTAAAGGGCTACAGGGTGCCACACCACAGATTGATGCTACTGACCTTTTCTTTACTCGGCCACCACGACGGACGAGGAGAGATGCCTGCCCATTGCTGATGCCACCGCCTTTGGCGTCTCCTAGTATATCAAATCAAACACCTCGGTCTCAGCCAGCGCTTAGGAGGTCCAGCGTATTGATGGCTCAACAGGACGACGGGTGGCCTTTGGGATTAAGACTACTAAATGCTAGAGTTGGATTGCTGGAAAACCGGGACTTTTCCGGATCAATCTCCTTCAACACTTTGCCCACTGGATCTCCAATCTCCTTCACGGACTCTTCAGATCTTGATTCTCAGTCAAGTGGGTCATTCCTCCATGCTAAAAGCATCAGTGGAGGTAGTCTAATAAGCGGTTCTGACATCGTGGAGCTCTCGAGAAGATCATCAAGAGTGGGAAGCACAGAAACCAGCTTAGGAGGATACAGAAAGAACGACTTCAAGTCCAAGCCATGGTTGTTTTCTCTTTGCTGTAAACTAAGCACCGACGCTGTGAGCGTCACCAGAACTCACTCGCTGGCTCACTTTCTGGAAGCGGAAAGGAGGAGAACCGCCGGTAATTGCCGGAGGAACCAGCTGAGAGCAATGATGCAAGGGCGGCCACGTCCCAATAATTTGTTGGCCAGCTGA LKPNKKVKAKGLQGATPQIDATDLFFTRPPRRTRRDACPLLMPPPLASPSISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSGSISFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRVGSTETSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAGNCRRNQLRAMMQGRPRPNNLLAS Homology
BLAST of Cp4.1LG19g04550 vs. NCBI nr
Match: XP_023518388.1 (uncharacterized protein LOC111781890 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 362 bits (930), Expect = 3.63e-125 Identity = 189/191 (98.95%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of Cp4.1LG19g04550 vs. NCBI nr
Match: XP_023518387.1 (uncharacterized protein LOC111781890 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 363 bits (931), Expect = 4.83e-125 Identity = 190/193 (98.45%), Postives = 190/193 (98.45%), Query Frame = 0
BLAST of Cp4.1LG19g04550 vs. NCBI nr
Match: XP_022963107.1 (uncharacterized protein LOC111463409 [Cucurbita moschata] >XP_022963108.1 uncharacterized protein LOC111463409 [Cucurbita moschata]) HSP 1 Score: 347 bits (889), Expect = 1.21e-118 Identity = 183/193 (94.82%), Postives = 185/193 (95.85%), Query Frame = 0
BLAST of Cp4.1LG19g04550 vs. NCBI nr
Match: XP_022972785.1 (uncharacterized protein LOC111471292 [Cucurbita maxima] >XP_022972786.1 uncharacterized protein LOC111471292 [Cucurbita maxima]) HSP 1 Score: 345 bits (886), Expect = 3.45e-118 Identity = 182/193 (94.30%), Postives = 183/193 (94.82%), Query Frame = 0
BLAST of Cp4.1LG19g04550 vs. NCBI nr
Match: KAG7027328.1 (hypothetical protein SDJN02_11340, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 350 bits (899), Expect = 1.68e-117 Identity = 185/192 (96.35%), Postives = 186/192 (96.88%), Query Frame = 0
BLAST of Cp4.1LG19g04550 vs. ExPASy TrEMBL
Match: A0A6J1HEB8 (uncharacterized protein LOC111463409 OS=Cucurbita moschata OX=3662 GN=LOC111463409 PE=4 SV=1) HSP 1 Score: 347 bits (889), Expect = 5.84e-119 Identity = 183/193 (94.82%), Postives = 185/193 (95.85%), Query Frame = 0
BLAST of Cp4.1LG19g04550 vs. ExPASy TrEMBL
Match: A0A6J1I9M4 (uncharacterized protein LOC111471292 OS=Cucurbita maxima OX=3661 GN=LOC111471292 PE=4 SV=1) HSP 1 Score: 345 bits (886), Expect = 1.67e-118 Identity = 182/193 (94.30%), Postives = 183/193 (94.82%), Query Frame = 0
BLAST of Cp4.1LG19g04550 vs. ExPASy TrEMBL
Match: A0A5D3DJ71 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00220 PE=4 SV=1) HSP 1 Score: 234 bits (598), Expect = 2.07e-74 Identity = 145/221 (65.61%), Postives = 157/221 (71.04%), Query Frame = 0
BLAST of Cp4.1LG19g04550 vs. ExPASy TrEMBL
Match: A0A6J1CR51 (uncharacterized protein LOC111013562 OS=Momordica charantia OX=3673 GN=LOC111013562 PE=4 SV=1) HSP 1 Score: 230 bits (586), Expect = 3.24e-73 Identity = 143/198 (72.22%), Postives = 155/198 (78.28%), Query Frame = 0
BLAST of Cp4.1LG19g04550 vs. ExPASy TrEMBL
Match: A0A1S4DWX0 (uncharacterized protein LOC103490160 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490160 PE=4 SV=1) HSP 1 Score: 216 bits (549), Expect = 1.17e-67 Identity = 123/163 (75.46%), Postives = 134/163 (82.21%), Query Frame = 0
BLAST of Cp4.1LG19g04550 vs. TAIR 10
Match: AT5G02440.1 (unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 96.7 bits (239), Expect = 2.6e-20 Identity = 69/168 (41.07%), Postives = 94/168 (55.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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