Cp4.1LG19g04550 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG19g04550
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionUnknown protein
LocationCp4.1LG19: 3278766 .. 3280916 (+)
RNA-Seq ExpressionCp4.1LG19g04550
SyntenyCp4.1LG19g04550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTAAACCGAACAAGAAAGTGAAAGCTAAAGGGTAAGAACCATTTATAAAAGACGTGAAAAGGAAAAGGCAAAAGAATTATTCTCTTGATTTGCTCAATCTCTGACCGCTGGTAGTGTATGAGGTGTTAATTTGAGGTCCTTATCATAGTTTATCCGATATTTGTATGATGTTTACTATTCCTTTGATTCTCTATGCTTCTGCTCATGTCTGCTGCTTGCAGGCTACAGGGTGCCACACCACAGATTGATGCTACTGACCTTTTCTTTACTCGGCCACCACGACGGACGAGGAGAGATGCCTGCCCATTGCTGATGGTTGTACTCTGTCCCTGCTATTGGAGAATCATTGGGATACGAGACTTGCTTTGGCCTCTCCATCTACCGTAAAACTTCCCTTTTTGTCGACATTTGGAGTTGCATTTACATGAACATGGAGCATGGAATAGACTTCCAAAAAGAAAAAGGTCCCCTCCATTTTCATTGTTTATTTATAAAAAAAAAATTTAATTTGTGGGCGTTAATATTTATTGATTTTAAGGATAAAAACGTCATTTCAGTTTCTTTAGTTTTTTTTGGGCGATTCTATCGATTTCCTTTTGTTATTTTTTTTCTGTTCTTTTCTATCTGCTTTTTTCCTCTCAGCATCGAATCTGAACTTGGTTTTTATTCCAAACATTATCTTCTCCATGTTAAATTTATCTCAATTCTACCATTTTCTTCCAGTTCATCTTCATATGAATTGACTGAATATGGGTAATTGGATATCTCACTGTTCTCTAGCTTAATGAAGTGACTGAAATTCCAGTTCATAATATGAAAACAGGGAATAGACGTTGCCCTGGCCTTCTGTCGAGTTTGTGGGCCTCTGATGTCACTGCAGTACGAAAGTAGTCTCATTGTGGTCTTTTCTATCATCCCTTTTTCCCTGCCAATCAGAAAATGCTCGAAACAAATGGCAACCCCTCTCTTTCTTACTGTCTGTTCTCTAATGATTTGAATTCAATGTTTTTCTTCTTAACATTTTCCTCGCCTGCAGCCACCGCCTTTGGCGTCTCCTAGTATATCAAATCAAACACCTCGGTCTCAGCCAGCGCTTAGGAGGTCCAGCGTATTGATGGCTCAACAGGTCTCTCTCTCTCTCTCTCTGTCTCCGAGTTTCTTTACTTTGTATACTTCTGAATAATGAGCTGAATTTTTTTAAGTGAGAATTGATTTCTAAACCAGGACGACGGGTGGCCTTTGGGATTAAGACTACTAAATGCTAGAGTTGGATTGCTGGAAAACCGGGACTTTTCCGGATCAATCTCCTTCAACACTTTGCCCACTGGATCTCCAATCTCCTTCACGGACTCTTCAGATCTTGATTCTCAGGTATGTTCGTCTTGTTTTTTTCGTAGTAATCACGAATCTACACAATAGTATAATAGTGTCCGCTTCGCCAAAAAGCCTCGTATTAATGTAAATGTATTACTTACTTATAATAAAGGTATGCTCATCCCCTAAATTTGTGAATATAGGACTCCCTCTCCCAACCATCTTCTCCCCTTTTCTCTGCACTTTTTGTGTTGTAAATGGTCACAATTTGTCTTTTAACTTCTCCCGCTTTGTGTTCCGATTGATTGCAGTCAAGTGGGTCATTCCTCCATGCTAAAAGCATCAGTGGAGGTAGTCTAATAAGCGGTTCTGACATCGTGGAGCTCTCGAGAAGATCATCAAGAGTGGGAAGCACAGAAACCAGCTTAGGAGGATACAGAAAGAACGACTTCAAGTCCAAGCCATGGTTGTTTTCTCTTTGCTGTAAACTAAGCACCGACGCTGTGAGCGTCACCAGAACTCACTCGCTGGCTCACTTTCTGGAAGCGGAAAGGAGGAGAACCGCCGGTAATTGCCGGAGGAACCAGCTGAGAGCAATGATGCAAGGGCGGCCACGTCCCAATAATTTGTTGGCCAGCTGAAACACTCTCTTTAAGTGAGGTACTTGGGACCCTTCATTTTCTAGTTTGGTTATTTTCGTTTCTTCTCTCTTTTTGTGCATATTCGGATGGAGAGTGTTACTTTGTGGGTTCTGTTCATTTAAATTCGGAATATGAAAATTCTAGTTAATCTAAATGTAGGCCAAACGAGGTAATTGTTAGGTACTATTTTCTTTA

mRNA sequence

CTTAAACCGAACAAGAAAGTGAAAGCTAAAGGGCTACAGGGTGCCACACCACAGATTGATGCTACTGACCTTTTCTTTACTCGGCCACCACGACGGACGAGGAGAGATGCCTGCCCATTGCTGATGCCACCGCCTTTGGCGTCTCCTAGTATATCAAATCAAACACCTCGGTCTCAGCCAGCGCTTAGGAGGTCCAGCGTATTGATGGCTCAACAGGACGACGGGTGGCCTTTGGGATTAAGACTACTAAATGCTAGAGTTGGATTGCTGGAAAACCGGGACTTTTCCGGATCAATCTCCTTCAACACTTTGCCCACTGGATCTCCAATCTCCTTCACGGACTCTTCAGATCTTGATTCTCAGTCAAGTGGGTCATTCCTCCATGCTAAAAGCATCAGTGGAGGTAGTCTAATAAGCGGTTCTGACATCGTGGAGCTCTCGAGAAGATCATCAAGAGTGGGAAGCACAGAAACCAGCTTAGGAGGATACAGAAAGAACGACTTCAAGTCCAAGCCATGGTTGTTTTCTCTTTGCTGTAAACTAAGCACCGACGCTGTGAGCGTCACCAGAACTCACTCGCTGGCTCACTTTCTGGAAGCGGAAAGGAGGAGAACCGCCGGTAATTGCCGGAGGAACCAGCTGAGAGCAATGATGCAAGGGCGGCCACGTCCCAATAATTTGTTGGCCAGCTGAAACACTCTCTTTAAGTGAGGTACTTGGGACCCTTCATTTTCTAGTTTGGTTATTTTCGTTTCTTCTCTCTTTTTGTGCATATTCGGATGGAGAGTGTTACTTTGTGGGTTCTGTTCATTTAAATTCGGAATATGAAAATTCTAGTTAATCTAAATGTAGGCCAAACGAGGTAATTGTTAGGTACTATTTTCTTTA

Coding sequence (CDS)

CTTAAACCGAACAAGAAAGTGAAAGCTAAAGGGCTACAGGGTGCCACACCACAGATTGATGCTACTGACCTTTTCTTTACTCGGCCACCACGACGGACGAGGAGAGATGCCTGCCCATTGCTGATGCCACCGCCTTTGGCGTCTCCTAGTATATCAAATCAAACACCTCGGTCTCAGCCAGCGCTTAGGAGGTCCAGCGTATTGATGGCTCAACAGGACGACGGGTGGCCTTTGGGATTAAGACTACTAAATGCTAGAGTTGGATTGCTGGAAAACCGGGACTTTTCCGGATCAATCTCCTTCAACACTTTGCCCACTGGATCTCCAATCTCCTTCACGGACTCTTCAGATCTTGATTCTCAGTCAAGTGGGTCATTCCTCCATGCTAAAAGCATCAGTGGAGGTAGTCTAATAAGCGGTTCTGACATCGTGGAGCTCTCGAGAAGATCATCAAGAGTGGGAAGCACAGAAACCAGCTTAGGAGGATACAGAAAGAACGACTTCAAGTCCAAGCCATGGTTGTTTTCTCTTTGCTGTAAACTAAGCACCGACGCTGTGAGCGTCACCAGAACTCACTCGCTGGCTCACTTTCTGGAAGCGGAAAGGAGGAGAACCGCCGGTAATTGCCGGAGGAACCAGCTGAGAGCAATGATGCAAGGGCGGCCACGTCCCAATAATTTGTTGGCCAGCTGA

Protein sequence

LKPNKKVKAKGLQGATPQIDATDLFFTRPPRRTRRDACPLLMPPPLASPSISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSGSISFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRVGSTETSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAGNCRRNQLRAMMQGRPRPNNLLAS
Homology
BLAST of Cp4.1LG19g04550 vs. NCBI nr
Match: XP_023518388.1 (uncharacterized protein LOC111781890 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362 bits (930), Expect = 3.63e-125
Identity = 189/191 (98.95%), Postives = 191/191 (100.00%), Query Frame = 0

Query: 40  LLMPPPLASPSISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSGSI 99
           L++PPPLASPSISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSGSI
Sbjct: 9   LIVPPPLASPSISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSGSI 68

Query: 100 SFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRVGSTETS 159
           SFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRVGSTETS
Sbjct: 69  SFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRVGSTETS 128

Query: 160 LGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAGNCRRNQLRAMMQ 219
           LGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAGNCRRNQLRAMMQ
Sbjct: 129 LGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAGNCRRNQLRAMMQ 188

Query: 220 GRPRPNNLLAS 230
           GRPRPNNLLAS
Sbjct: 189 GRPRPNNLLAS 199

BLAST of Cp4.1LG19g04550 vs. NCBI nr
Match: XP_023518387.1 (uncharacterized protein LOC111781890 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 363 bits (931), Expect = 4.83e-125
Identity = 190/193 (98.45%), Postives = 190/193 (98.45%), Query Frame = 0

Query: 38  CPLLMPPPLASPSISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG 97
           C   MPPPLASPSISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG
Sbjct: 25  CSKQMPPPLASPSISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG 84

Query: 98  SISFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRVGSTE 157
           SISFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRVGSTE
Sbjct: 85  SISFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRVGSTE 144

Query: 158 TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAGNCRRNQLRAM 217
           TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAGNCRRNQLRAM
Sbjct: 145 TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAGNCRRNQLRAM 204

Query: 218 MQGRPRPNNLLAS 230
           MQGRPRPNNLLAS
Sbjct: 205 MQGRPRPNNLLAS 217

BLAST of Cp4.1LG19g04550 vs. NCBI nr
Match: XP_022963107.1 (uncharacterized protein LOC111463409 [Cucurbita moschata] >XP_022963108.1 uncharacterized protein LOC111463409 [Cucurbita moschata])

HSP 1 Score: 347 bits (889), Expect = 1.21e-118
Identity = 183/193 (94.82%), Postives = 185/193 (95.85%), Query Frame = 0

Query: 38  CPLLMPPPLASPSISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG 97
           C   MPP LASPSIS+Q PRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG
Sbjct: 25  CSKQMPPSLASPSISDQPPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG 84

Query: 98  SISFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRVGSTE 157
           SISFNTLPTGSPISF DSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSR GSTE
Sbjct: 85  SISFNTLPTGSPISFADSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRGGSTE 144

Query: 158 TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAGNCRRNQLRAM 217
           TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTA NCRRNQLRAM
Sbjct: 145 TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAM 204

Query: 218 MQGRPRPNNLLAS 230
           MQGRPRP+NLLAS
Sbjct: 205 MQGRPRPSNLLAS 217

BLAST of Cp4.1LG19g04550 vs. NCBI nr
Match: XP_022972785.1 (uncharacterized protein LOC111471292 [Cucurbita maxima] >XP_022972786.1 uncharacterized protein LOC111471292 [Cucurbita maxima])

HSP 1 Score: 345 bits (886), Expect = 3.45e-118
Identity = 182/193 (94.30%), Postives = 183/193 (94.82%), Query Frame = 0

Query: 38  CPLLMPPPLASPSISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG 97
           C   MPPPLASPSISN  PRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG
Sbjct: 25  CSKQMPPPLASPSISNHPPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG 84

Query: 98  SISFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRVGSTE 157
           SISFNTLPTGSPISFTDSSDLDSQSSGSF HAKSISG SLISGS IVELS RSSRVGSTE
Sbjct: 85  SISFNTLPTGSPISFTDSSDLDSQSSGSFFHAKSISGASLISGSGIVELSSRSSRVGSTE 144

Query: 158 TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAGNCRRNQLRAM 217
           TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTA NCRR+QLRAM
Sbjct: 145 TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAANCRRDQLRAM 204

Query: 218 MQGRPRPNNLLAS 230
           MQGRPRPNNLLAS
Sbjct: 205 MQGRPRPNNLLAS 217

BLAST of Cp4.1LG19g04550 vs. NCBI nr
Match: KAG7027328.1 (hypothetical protein SDJN02_11340, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350 bits (899), Expect = 1.68e-117
Identity = 185/192 (96.35%), Postives = 186/192 (96.88%), Query Frame = 0

Query: 39  PLLMPPPLASPSISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSGS 98
           P L PP LASPSISNQ PRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSGS
Sbjct: 206 PFLHPPSLASPSISNQPPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSGS 265

Query: 99  ISFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRVGSTET 158
           ISFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSR GSTET
Sbjct: 266 ISFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRGGSTET 325

Query: 159 SLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAGNCRRNQLRAMM 218
           SLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTA NCRRNQLRAMM
Sbjct: 326 SLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAMM 385

Query: 219 QGRPRPNNLLAS 230
           QGRPRP+NLLAS
Sbjct: 386 QGRPRPSNLLAS 397

BLAST of Cp4.1LG19g04550 vs. ExPASy TrEMBL
Match: A0A6J1HEB8 (uncharacterized protein LOC111463409 OS=Cucurbita moschata OX=3662 GN=LOC111463409 PE=4 SV=1)

HSP 1 Score: 347 bits (889), Expect = 5.84e-119
Identity = 183/193 (94.82%), Postives = 185/193 (95.85%), Query Frame = 0

Query: 38  CPLLMPPPLASPSISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG 97
           C   MPP LASPSIS+Q PRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG
Sbjct: 25  CSKQMPPSLASPSISDQPPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG 84

Query: 98  SISFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRVGSTE 157
           SISFNTLPTGSPISF DSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSR GSTE
Sbjct: 85  SISFNTLPTGSPISFADSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRGGSTE 144

Query: 158 TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAGNCRRNQLRAM 217
           TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTA NCRRNQLRAM
Sbjct: 145 TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAANCRRNQLRAM 204

Query: 218 MQGRPRPNNLLAS 230
           MQGRPRP+NLLAS
Sbjct: 205 MQGRPRPSNLLAS 217

BLAST of Cp4.1LG19g04550 vs. ExPASy TrEMBL
Match: A0A6J1I9M4 (uncharacterized protein LOC111471292 OS=Cucurbita maxima OX=3661 GN=LOC111471292 PE=4 SV=1)

HSP 1 Score: 345 bits (886), Expect = 1.67e-118
Identity = 182/193 (94.30%), Postives = 183/193 (94.82%), Query Frame = 0

Query: 38  CPLLMPPPLASPSISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG 97
           C   MPPPLASPSISN  PRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG
Sbjct: 25  CSKQMPPPLASPSISNHPPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSG 84

Query: 98  SISFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLISGSDIVELSRRSSRVGSTE 157
           SISFNTLPTGSPISFTDSSDLDSQSSGSF HAKSISG SLISGS IVELS RSSRVGSTE
Sbjct: 85  SISFNTLPTGSPISFTDSSDLDSQSSGSFFHAKSISGASLISGSGIVELSSRSSRVGSTE 144

Query: 158 TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAGNCRRNQLRAM 217
           TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTA NCRR+QLRAM
Sbjct: 145 TSLGGYRKNDFKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAANCRRDQLRAM 204

Query: 218 MQGRPRPNNLLAS 230
           MQGRPRPNNLLAS
Sbjct: 205 MQGRPRPNNLLAS 217

BLAST of Cp4.1LG19g04550 vs. ExPASy TrEMBL
Match: A0A5D3DJ71 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00220 PE=4 SV=1)

HSP 1 Score: 234 bits (598), Expect = 2.07e-74
Identity = 145/221 (65.61%), Postives = 157/221 (71.04%), Query Frame = 0

Query: 14  GATPQIDATDLFFTRPPRRTRRDACPLLMPP------PLASPS----------------I 73
           GATPQ D T+L  T PP RTR DACP LM           SPS                I
Sbjct: 6   GATPQTDVTNLL-TWPPPRTRIDACPFLMKNHRDTRFAFGSPSSLILWQTTSFDLTFLSI 65

Query: 74  SNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSGSISFNTLPTGSPIS 133
           SNQ P+SQP       +MAQQDDGWPLGLR+LNARVGLLENRDF GSISFNTLPTGSPIS
Sbjct: 66  SNQPPQSQP-------VMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSPIS 125

Query: 134 FTDSSDLDSQSSGSFLHAKSISGGSLISGS--DIVELSRRSSRVGSTETSLGGYRKND-- 193
           FTDSS LDS+SSGSF H+KS + GSL+ GS  +I+ELSRRSSR GSTE SLG  RK +  
Sbjct: 126 FTDSSVLDSESSGSFFHSKSTTLGSLLGGSTSNIMELSRRSSREGSTEASLGVDRKINNY 185

Query: 194 --FKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTA 206
             FKSK WLFSLCCKLSTDAV  TRTHSLAHFLE ER+RTA
Sbjct: 186 FKFKSKQWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTA 218

BLAST of Cp4.1LG19g04550 vs. ExPASy TrEMBL
Match: A0A6J1CR51 (uncharacterized protein LOC111013562 OS=Momordica charantia OX=3673 GN=LOC111013562 PE=4 SV=1)

HSP 1 Score: 230 bits (586), Expect = 3.24e-73
Identity = 143/198 (72.22%), Postives = 155/198 (78.28%), Query Frame = 0

Query: 41  LMPPPLASPSISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFS-GSI 100
           ++PP L SPSI NQ P+SQP  RRSS +MAQQDDGWPLGLRLLNARVGLL +RDFS GSI
Sbjct: 1   MLPPHLTSPSIPNQPPQSQPLPRRSSQVMAQQDDGWPLGLRLLNARVGLLGDRDFSAGSI 60

Query: 101 SFNTLPTGSPISFTDSSDLDSQSSGSFLHAKSISGGSLI--SGSDIVELSRRSSRVGSTE 160
           SFNTLPTGS  SFTDSSDLDS+S+GSF H KSI+ GSL+  S S IVELSRRS R G TE
Sbjct: 61  SFNTLPTGSLSSFTDSSDLDSESTGSFFHDKSITLGSLMDDSSSSIVELSRRSPR-GITE 120

Query: 161 TSLGGY--RKND-FKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTAG--NCRRN 220
            SLGG   RKN   KSK WLFSLCCKLSTDAVS TRT SLAHFLEAERR++A   NCRRN
Sbjct: 121 GSLGGEGDRKNICLKSKAWLFSLCCKLSTDAVSATRTRSLAHFLEAERRKSAAAANCRRN 180

Query: 221 QLRAMMQGRPRPNNLLAS 230
           QLR        PNNL+ S
Sbjct: 181 QLRISAM----PNNLVTS 193

BLAST of Cp4.1LG19g04550 vs. ExPASy TrEMBL
Match: A0A1S4DWX0 (uncharacterized protein LOC103490160 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490160 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 1.17e-67
Identity = 123/163 (75.46%), Postives = 134/163 (82.21%), Query Frame = 0

Query: 50  SISNQTPRSQPALRRSSVLMAQQDDGWPLGLRLLNARVGLLENRDFSGSISFNTLPTGSP 109
           SISNQ P+SQP       +MAQQDDGWPLGLR+LNARVGLLENRDF GSISFNTLPTGSP
Sbjct: 15  SISNQPPQSQP-------VMAQQDDGWPLGLRMLNARVGLLENRDFPGSISFNTLPTGSP 74

Query: 110 ISFTDSSDLDSQSSGSFLHAKSISGGSLISGS--DIVELSRRSSRVGSTETSLGGYRKND 169
           ISFTDSS LDS+SSGSF H+KS + GSL+ GS  +I+ELSRRSSR GSTE SLG  RK +
Sbjct: 75  ISFTDSSVLDSESSGSFFHSKSTTLGSLLGGSTSNIMELSRRSSREGSTEASLGVDRKIN 134

Query: 170 ----FKSKPWLFSLCCKLSTDAVSVTRTHSLAHFLEAERRRTA 206
               FKSK WLFSLCCKLSTDAV  TRTHSLAHFLE ER+RTA
Sbjct: 135 NYFKFKSKQWLFSLCCKLSTDAVIATRTHSLAHFLELERKRTA 170

BLAST of Cp4.1LG19g04550 vs. TAIR 10
Match: AT5G02440.1 (unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.7 bits (239), Expect = 2.6e-20
Identity = 69/168 (41.07%), Postives = 94/168 (55.95%), Query Frame = 0

Query: 69  MAQQDDGWPLGLRLLNARVGLL---------ENRDFSGSISFNTLPTGSPISFTDSSDLD 128
           MA Q++GWPLGLR +NAR+G L           +  +GSISF++L + SP S   SSDLD
Sbjct: 1   MAHQEEGWPLGLRPVNARIGGLTRGTHHHHHHEQVSAGSISFSSLLSPSP-SSQSSSDLD 60

Query: 129 SQSSGSFLHAKSISGGSLISGSDIVELSRRSSRVGSTETSLGGYRKN--DFKS--KPWLF 188
           SQS GSF   +S + G+LI  S  +ELSRRS+R  + +T      ++  + K+  KPW+F
Sbjct: 61  SQSMGSFFRDRSYTLGNLIGISSFLELSRRSNRTRNDQTGAARNHQHHKNLKTYYKPWIF 120

Query: 189 SLCCKLSTDAVSVT-------------RTHSLAHFLEAERRRTAGNCR 211
           S+C KLST+A  ++                SL HFL  ERR      R
Sbjct: 121 SICSKLSTNATVISHNRIINEENDGRNNVQSLGHFLIMERRAVGSTIR 167

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023518388.13.63e-12598.95uncharacterized protein LOC111781890 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023518387.14.83e-12598.45uncharacterized protein LOC111781890 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022963107.11.21e-11894.82uncharacterized protein LOC111463409 [Cucurbita moschata] >XP_022963108.1 unchar... [more]
XP_022972785.13.45e-11894.30uncharacterized protein LOC111471292 [Cucurbita maxima] >XP_022972786.1 uncharac... [more]
KAG7027328.11.68e-11796.35hypothetical protein SDJN02_11340, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
A0A6J1HEB85.84e-11994.82uncharacterized protein LOC111463409 OS=Cucurbita moschata OX=3662 GN=LOC1114634... [more]
A0A6J1I9M41.67e-11894.30uncharacterized protein LOC111471292 OS=Cucurbita maxima OX=3661 GN=LOC111471292... [more]
A0A5D3DJ712.07e-7465.61Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1CR513.24e-7372.22uncharacterized protein LOC111013562 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A1S4DWX01.17e-6775.46uncharacterized protein LOC103490160 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
Match NameE-valueIdentityDescription
AT5G02440.12.6e-2041.07unknown protein; Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..63
NoneNo IPR availablePANTHERPTHR33544:SF360S RIBOSOMAL PROTEIN L36coord: 69..217
IPR040344Uncharacterized protein At3g17950-likePANTHERPTHR33544FAMILY NOT NAMEDcoord: 69..217

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g04550.1Cp4.1LG19g04550.1mRNA