Cp4.1LG19g04290 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g04290
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	60S ribosomal protein L4-like
Location	Cp4.1LG19: 3542691 .. 3547616 (+)
RNA-Seq Expression	Cp4.1LG19g04290
Synteny	Cp4.1LG19g04290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTGGTTAATAATATGAAATATATTTACCCAAAATTTAAAAAAATTAATTTAATATTTAAATTTTTTAATATATATGGGATAATTTTGACAGTGAAAGGGTAAAACTGTAATAATGAGCCCAATCATGTCCAGCCCAATTTTGACCCATACTTTCGGCCCAGCCCATTTATTAAAAAAATATTAGAGATTATTAATAAAATAATTAAAAGGAAAAAAAAGGAGCGATAATCAGCGACGAATCGCCGATCTTCTCCGTCTTCTCGATCTCAGGTTCTCTCCATTCCCATTCTTTGTTTCAATTTTCAGTTTGTTTTTCTTCTGTTGTTCTGCGGTGATTAAACCCTAATTCGATCGCCATTGAAGCACTCAAGAATGCTTCAGCATCAAATTGTACAGTCCCCAGCAAGATTGGGCTTGACGAACCCTAATTCTCCTTCAATTCAAAACCCTACCCCACCGAAATTGCCCCCTTCTCAACAATCCCACCACCAAAATCAATCCAATCTTTCATCTCCGACTCCCTCCTCCACGCTTCTTCCTCTCCTTCCTCCTCTTCCTAGAGCTCAAGCTCTTCTCCTGCAAATGGCTTCTTTAGCTTCCAAGCTCTTCGAAGTTTACCCCAATCGAGCCCTTTGGCTCACTGCATTTCGGGGCTCTCTTCCCACTTTTCTTAATTCTCAAACCCAGTCGGCTCCCTCTACGCCGCTTGATTCTACTCCGTCTACTTCAAAAGAAATTCTGTCACTGTTTAATGTTCTGCAGACTCAGTTGTTTGAAGCTGTTGCTGAGCTTCAGGAGATTCTTGATCTTCAAGACTCTAAGCAAAAGATTGCTTATGAAATGCGGGCTAAAGATGCTGCTCTTCGTGCTTTTGCTAATAAACTAAAGGATGCTGAACAGGTTCTTGATGTTTTGTTTGATGATTATGCTGATTATCAGGGTCATAAACGTGTTAAAACGACCGATGATGTCGAAAACGAGTCATTGTGTTCGTCTACTACTGTTGCATCCCAGTTGAAATTATCTGATATATTGTCATATGCTCATAAAATAAGCTATACTACTTTTGCACCACCTGAATTTGGAGCCGGACAAGCTCCGTTGCGCGGGGCGCTTCCCCCCGCCCCGCAAGAAGAGCAAATGCGTGCTTCCCAGTTGTATAGTTTTGCTGATCTTGATGTTGGCTTGCCTAAATCAGTTGAAAGCACTGAGAAAACCATCGAGCCAATGATTGAGCCACCAGCTCCGGTGCCAACAGATGCCAATCCTTTAGCTCTGGCTGGTATTCAAGGGCTGCTTCCTCCAAATATCACTGTGCCATCTGGTTGGAAGCCTGGAATGCCTGTGGAATTACCTAGAGATTTACCAATGCCCCCTCCTGGATGGAAGCCTGGGGACCCTGTGCCATTACCCCCATTGGACTCTCTTCCTGTTGCTAGAGTTGACGAGCCACAATTGAGGCATAATGCTCTTCCAGGATTACACAGACCTCAAGAGCCAATTCAAGTTAGGCATGTTCAGTTGGATATTCTCGATCAAGACGATGATAGCAGCGATTATGCTAGTGAAGAAGGAAGCTCTGAAGATGATGATTGAGGAAACCCGCCTGCTGGATCACTGACTAAGGTGCCTAAATGACCGTATAGCGACGAAACGGGCATGGGTGTAGAGATAATCACAAGGTTGCTGCTTAACCTTTACCTTTAAAGAGTGTGTAATAGTTCACTGATCCCTGAATATGAATGGAGATTAAGCATGTTTACTTTGTTTTGAATGTAAGCTAATCAAACCCTCTTAGGATACTGGATGCACTTTGAACCTGAGTAAAGAGTGTCCTAACTTTAGTACCATGTCGTTGGTCAGTCGAGTGCGTGCTTAATAAGCTTTTAGTAATTCATGAAAGCTATAGCCTCGCTAATTCTCGTGATACAATCATTTTACCTTACTATATTTGGTCGTCGAGGTGACTTGTAATGAAACGAAATGAAGATTGCTGATGTTGTAGCGTTTTCTCGTGTGGTGATCATTGAACTCGAAAAATTTCTCATTGGCTTGTTTCTCTTGTCATTTAGGATTTCACAGTTTTTAGCCTATTGGCTTGCGTTAATGAACAATGAATGCCGTTCTTCTAAAAGAAAACTATACTTTTTGGGTTTCAAGAACTGGGCTTTGAATCAGGCCCATTTGTTCGGTTGGCCCAAACGAATTGGGTTGGGCCTGGCATGGAATTCGAGGAAGACGCAAATAACTTCATATTAACAAAATGAAAATATTGAATTGAAAAGTTGGGGTCAATAATGTAATTTCACACCTTCATTTTATTATTTTTCATAATTAATAATTAAGAAAAAAATAATTAATGATCTATCTTTGTGACACGAAACACATATATAAACGCTCAGCGGGCAAACCCTAATTCTTCTCTTCCTTTCTCTCCTCTTCTTCACTTCACACACGAACACTCTTCAATGGCTGTTGCCGCCGCTCGCCCACTTGTTTCGGTTCAGTCCCTTGAAGGGGACATGGCCACTGATGCGGCACCCGGCGTCCCGCTGCCCGACGTGATGAAGGCTTCAATTCGGCCGGATATTGTTAGCTTTGTTCATTCCAATATCTCAAAGAACAGCCGCCAGCCCTACGCCGTCAGCAAGCGCGCCGGCCACCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCCCGTGTCCCTGGCGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCAACTAAGATCTGGCGACGTTGGCACCGAAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTTTCGGCTATTGCGGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGCGGCCATCGTATCGAGTCTGTCCCTGAATTGCCTCTTGTTGTGAGCGACTCGGCCGAAGGCGTTGAGAAGACCTCTGCTGCAATCAAGGTTCTCAAACAGGTTGGTGCTTTTCCCGATGCTGAGAAGGCCAAGGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAACCGTCGCTACATTTCTCGCAAGGGTCCGTTGATTGTTTACGGAACTGAGGGCGCTAAACTTGTTAAGGCCTTCCGTAACATTCCGGGAGTTGAGATTGCCAATGTTGAGAGGCTTAATTTGTTGAAGCTCGCTCCTGGTGGTCACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTCGAGAAGCCTTCAGAGAAGAAAAAGGGTTACGTTCTCCCAAGGTCTAAGATGGTGAATGCTGATTTGTCGAGGATTATTAACTCTGATGAAGTCCAATCTGTGGTGAAGCCGATTAAGAAGGCTGTTAAGAGAGCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCGTATGCCAAGACTGCTAGAAGAATGGCTCTTTTGGCGGAGGAGCAACGTGTTAAGGCTAAAAAGGAGAAACTCGACAAGAAGAGGAATTTGACTACAAAGGTACATCATTCATATTCTTAGTGATTATCTTCATTCTTTTAGAAATTAAGTTGCGCATATCTCCATAGCAGATTGATTGGGCTGGCGATTTCCTTCAAATATTTATTAAGTTGATACTATTTTTGATGTGGGTTTCGTTTCACTCTTAAGATTGATGGCATAATTAATTTAATTTCATGTTACATACAGTGGAATCTTTGTATCTGGCTTATAGTTATTGGGTCTGCTTAATGATATGCTTTTATGAAAATTATTGCTCTATGTTCAATCATGTCCTGTTATCATTTAACTTCGATATGCATCGTTCTTGAGGACTACTGTTTACTCTCATCACTTATACTTCATAATTGATTAGATTGGTCGAATTCTTAAGTACACTTTGTTCTATGTGCTCGCCTTTTCCATCCTTGTAAGTTCAATTTATCTGTTGTTGATTTGGTAGAGAAATAATTTATTTTTTAGATTTCTTTGTTTCATCATGATGAGGAGATGTTCATTCAATCCTTCAATCATCAATACTCCGTGACCACAAGTTGTTTTATACGGTGGCACGATCATATGATCATATCATCTGCATTTTGTGGAACCAGACTTTGTTGTCTCAGTACATATCCTATTCATGGTGTCGACTTTCTTTTCTCATTTTTTGTACATGACCCTCACAGGAGGAGGCTACTTCAATCAAAGCTGCAGGCAAGGCATGGTATCAGACGATGATCTCCGACAGTGATTACACCGAGTTCGACAACTTCTCGAAATGGCTTGGCGTCTCTCAGTAATTTTGCTTTTCTTTATTCAAAATCTCATAGACCTCATTACTTCGGTAAATCTAGTTTTGTCGAGGAGTTGATTTTTCTTGCTTGGATTGTTGTTGCGTTTTAGAGTTTAGGAGAACAATGAGTGAAGTAAACATGATAATTTACCTTTGGCCTTTTGCTCTCCCATTTTTATCTACATTCCTCCTCTTTTGTTCATCTACAAGGAGTGTGTAGTAGTTGCCTTTTATCATGTCACCATGGTGAGATTACATGCACTGTGATATGCAATTCTTCTGCTTTTAATGGTCATTGTTCTTGATGCCCTTTTATTCAATGCCATATCATTTTTCCCCATTGGCTTAGCCTCAGCCTTGGAGTGATTAGAATTATGCAATTTCTAAAATTGAAATTGTTGGGGATTTGTTCTCCATCCTTGATTTCAAATTTTATGAAAAATTATGCAAAATATATTGTTTAGAGGACCATATTTAGAAGGGTAATTATAAAAAATATTGTTTACAATTGTATATTGTGTGTTTATAAATCTTCAATATATACTAATATAATATATTTTCTTCCCCCATATAT

mRNA sequence

ATGGTTTGTGAAAGGACTCAGTTGTTTGAAGCTGTTGCTGAGCTTCAGGAGATTCTTGATCTTCAAGACTCTAAGCAAAAGATTGCTTATGAAATGCGGGCTAAAGATGCTGCTCTTCGTGCTTTTGCTAATAAACTAAAGGATGCTGAACAGGTTCTTGATGTTTTGTTTGATGATTATGCTGATTATCAGGGTCATAAACGTGTTAAAACGACCGATGATGTCGAAAACGAGTCATTGTGTTCGTCTACTACTGTTGCATCCCAGTTGAAATTATCTGATATATTGTCATATGCTCATAAAATAAGCTATACTACTTTTGCACCACCTGAATTTGGAGCCGGACAAGCTCCGTTGCGCGGGGCGCTTCCCCCCGCCCCGCAAGAAGAGCAAATGCGTGCTTCCCAGTTGTATAGTTTTGCTGATCTTGATGTTGGCTTGCCTAAATCAGTTGAAAGCACTGAGAAAACCATCGAGCCAATGATTGAGCCACCAGCTCCGGTGCCAACAGATGCCAATCCTTTAGCTCTGGCTGGTATTCAAGGGCTGCTTCCTCCAAATATCACTGTGCCATCTGGTTGGAAGCCTGGAATGCCTGTGGAATTACCTAGAGATTTACCAATGCCCCCTCCTGGATGGAAGCCTGGGGACCCTGTGCCATTACCCCCATTGGACTCTCTTCCTGTTGCTAGAGTTGACGAGCCACAATTGAGGCATAATGCTCTTCCAGGATTACACAGACCTCAAGAGCCAATTCAACGGGCAAACCCTAATTCTTCTCTTCCTTTCTCTCCTCTTCTTCACTTCACACACGAACACTCTTCAATGGCTGTTGCCGCCGCTCGCCCACTTGTTTCGGTTCAGTCCCTTGAAGGGGACATGGCCACTGATGCGGCACCCGGCGTCCCGCTGCCCGACGTGATGAAGGCTTCAATTCGGCCGGATATTGTTAGCTTTGTTCATTCCAATATCTCAAAGAACAGCCGCCAGCCCTACGCCGTCAGCAAGCGCGCCGGCCACCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCCCGTGTCCCTGGCGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCAACTAAGATCTGGCGACGTTGGCACCGAAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTTTCGGCTATTGCGGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGCGGCCATCGTATCGAGTCTGTCCCTGAATTGCCTCTTGTTGTGAGCGACTCGGCCGAAGGCGTTGAGAAGACCTCTGCTGCAATCAAGGTTCTCAAACAGGTTGGTGCTTTTCCCGATGCTGAGAAGGCCAAGGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAACCGTCGCTACATTTCTCGCAAGGGTCCGTTGATTGTTTACGGAACTGAGGGCGCTAAACTTGTTAAGGCCTTCCGTAACATTCCGGGAGTTGAGATTGCCAATGTTGAGAGGCTTAATTTGTTGAAGCTCGCTCCTGGTGGTCACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTCGAGAAGCCTTCAGAGAAGAAAAAGGGTTACGTTCTCCCAAGGTCTAAGATGGTGAATGCTGATTTGTCGAGGATTATTAACTCTGATGAAGTCCAATCTGTGGTGAAGCCGATTAAGAAGGCTGTTAAGAGAGCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCGTATGCCAAGACTGCTAGAAGAATGGCTCTTTTGGCGGAGGAGCAACGTGTTAAGGCTAAAAAGGAGAAACTCGACAAGAAGAGGAATTTGACTACAAAGGAGGAGGCTACTTCAATCAAAGCTGCAGGCAAGGCATGGTATCAGACGATGATCTCCGACAGTGATTACACCGAGTTCGACAACTTCTCGAAATGGCTTGGCGTCTCTCAGTAATTTTGCTTTTCTTTATTCAAAATCTCATAGACCTCATTACTTCGGTAAATCTAGTTTTGTCGAGGAGTTGATTTTTCTTGCTTGGATTGTTGTTGCGTTTTAGAGTTTAGGAGAACAATGAGTGAAGTAAACATGATAATTTACCTTTGGCCTTTTGCTCTCCCATTTTTATCTACATTCCTCCTCTTTTGTTCATCTACAAGGAGTGTGTAGTAGTTGCCTTTTATCATGTCACCATGGTGAGATTACATGCACTGTGATATGCAATTCTTCTGCTTTTAATGGTCATTGTTCTTGATGCCCTTTTATTCAATGCCATATCATTTTTCCCCATTGGCTTAGCCTCAGCCTTGGAGTGATTAGAATTATGCAATTTCTAAAATTGAAATTGTTGGGGATTTGTTCTCCATCCTTGATTTCAAATTTTATGAAAAATTATGCAAAATATATTGTTTAGAGGACCATATTTAGAAGGGTAATTATAAAAAATATTGTTTACAATTGTATATTGTGTGTTTATAAATCTTCAATATATACTAATATAATATATTTTCTTCCCCCATATAT

Coding sequence (CDS)

ATGGTTTGTGAAAGGACTCAGTTGTTTGAAGCTGTTGCTGAGCTTCAGGAGATTCTTGATCTTCAAGACTCTAAGCAAAAGATTGCTTATGAAATGCGGGCTAAAGATGCTGCTCTTCGTGCTTTTGCTAATAAACTAAAGGATGCTGAACAGGTTCTTGATGTTTTGTTTGATGATTATGCTGATTATCAGGGTCATAAACGTGTTAAAACGACCGATGATGTCGAAAACGAGTCATTGTGTTCGTCTACTACTGTTGCATCCCAGTTGAAATTATCTGATATATTGTCATATGCTCATAAAATAAGCTATACTACTTTTGCACCACCTGAATTTGGAGCCGGACAAGCTCCGTTGCGCGGGGCGCTTCCCCCCGCCCCGCAAGAAGAGCAAATGCGTGCTTCCCAGTTGTATAGTTTTGCTGATCTTGATGTTGGCTTGCCTAAATCAGTTGAAAGCACTGAGAAAACCATCGAGCCAATGATTGAGCCACCAGCTCCGGTGCCAACAGATGCCAATCCTTTAGCTCTGGCTGGTATTCAAGGGCTGCTTCCTCCAAATATCACTGTGCCATCTGGTTGGAAGCCTGGAATGCCTGTGGAATTACCTAGAGATTTACCAATGCCCCCTCCTGGATGGAAGCCTGGGGACCCTGTGCCATTACCCCCATTGGACTCTCTTCCTGTTGCTAGAGTTGACGAGCCACAATTGAGGCATAATGCTCTTCCAGGATTACACAGACCTCAAGAGCCAATTCAACGGGCAAACCCTAATTCTTCTCTTCCTTTCTCTCCTCTTCTTCACTTCACACACGAACACTCTTCAATGGCTGTTGCCGCCGCTCGCCCACTTGTTTCGGTTCAGTCCCTTGAAGGGGACATGGCCACTGATGCGGCACCCGGCGTCCCGCTGCCCGACGTGATGAAGGCTTCAATTCGGCCGGATATTGTTAGCTTTGTTCATTCCAATATCTCAAAGAACAGCCGCCAGCCCTACGCCGTCAGCAAGCGCGCCGGCCACCAAACCTCCGCTGAGTCCTGGGGTACCGGACGTGCTGTGTCCCGTATTCCCCGTGTCCCTGGCGGTGGTACTCACCGTGCTGGTCAGGGTGCTTTTGGAAACATGTGTCGTGGTGGTCGAATGTTCGCTCCAACTAAGATCTGGCGACGTTGGCACCGAAAGATCAATGTGAATCAGAAGAGGTATGCTGTTGTTTCGGCTATTGCGGCCTCGGCTGTTCCATCGTTGGTTCTTGCTCGCGGCCATCGTATCGAGTCTGTCCCTGAATTGCCTCTTGTTGTGAGCGACTCGGCCGAAGGCGTTGAGAAGACCTCTGCTGCAATCAAGGTTCTCAAACAGGTTGGTGCTTTTCCCGATGCTGAGAAGGCCAAGGATAGCCATGCGATCCGTCCTGGTAAGGGTAAAATGAGGAACCGTCGCTACATTTCTCGCAAGGGTCCGTTGATTGTTTACGGAACTGAGGGCGCTAAACTTGTTAAGGCCTTCCGTAACATTCCGGGAGTTGAGATTGCCAATGTTGAGAGGCTTAATTTGTTGAAGCTCGCTCCTGGTGGTCACCTTGGAAGGTTTGTGATCTGGACCAAGTCTGCTTTTGAGAAGCTTGATTCTATCTATGGATCTTTCGAGAAGCCTTCAGAGAAGAAAAAGGGTTACGTTCTCCCAAGGTCTAAGATGGTGAATGCTGATTTGTCGAGGATTATTAACTCTGATGAAGTCCAATCTGTGGTGAAGCCGATTAAGAAGGCTGTTAAGAGAGCTCCATTGAAGAAGAACCCATTGAAGAACTTGAACGCCATGCTCAAGCTTAACCCGTATGCCAAGACTGCTAGAAGAATGGCTCTTTTGGCGGAGGAGCAACGTGTTAAGGCTAAAAAGGAGAAACTCGACAAGAAGAGGAATTTGACTACAAAGGAGGAGGCTACTTCAATCAAAGCTGCAGGCAAGGCATGGTATCAGACGATGATCTCCGACAGTGATTACACCGAGTTCGACAACTTCTCGAAATGGCTTGGCGTCTCTCAGTAA

Protein sequence

MVCERTQLFEAVAELQEILDLQDSKQKIAYEMRAKDAALRAFANKLKDAEQVLDVLFDDYADYQGHKRVKTTDDVENESLCSSTTVASQLKLSDILSYAHKISYTTFAPPEFGAGQAPLRGALPPAPQEEQMRASQLYSFADLDVGLPKSVESTEKTIEPMIEPPAPVPTDANPLALAGIQGLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPLDSLPVARVDEPQLRHNALPGLHRPQEPIQRANPNSSLPFSPLLHFTHEHSSMAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ

Homology

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BLAST of Cp4.1LG19g04290 vs. ExPASy Swiss-Prot
Match: Q9XF97 (60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1)

HSP 1 Score: 704.1 bits (1816), Expect = 1.5e-201
Identity = 360/405 (88.89%), Postives = 385/405 (95.06%), Query Frame = 0


Query: 277 AVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSK 336
           A AAARPLV+VQSLEGDMATD    V LPDVMKASIRPDIV+FVHSNISKNSRQPYAVSK
Sbjct: 4   AAAAARPLVTVQSLEGDMATDQTQTVALPDVMKASIRPDIVTFVHSNISKNSRQPYAVSK 63

Query: 337 RAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 396
           +AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN
Sbjct: 64  KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKIN 123

Query: 397 VNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGA 456
           VNQKRYAVVSAIAASAVPSLVLARGH+IE+VPELPLVVSDS EGVE+TSAA+KVLKQ+GA
Sbjct: 124 VNQKRYAVVSAIAASAVPSLVLARGHKIETVPELPLVVSDSIEGVEETSAALKVLKQIGA 183

Query: 457 FPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERL 516
           + DAEKAKDSH+IRPGKGKMRNRRYI+RKGPLIVYGTEGAKLVKAFRNIPG++I NVERL
Sbjct: 184 YSDAEKAKDSHSIRPGKGKMRNRRYINRKGPLIVYGTEGAKLVKAFRNIPGIDIINVERL 243

Query: 517 NLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINS 576
           NLLKLAPGGHLGRFV+WTKSAFEKLDSIYGSF+K SEKK GYVLPRSKMVNADL+RIINS
Sbjct: 244 NLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKVSEKKNGYVLPRSKMVNADLARIINS 303

Query: 577 DEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLD 636
           DEVQSVV PI++  KRAPLKKNPL+ LN MLKLNPYAKTARRM+LLAE +RVKAKKEKLD
Sbjct: 304 DEVQSVVSPIQEGSKRAPLKKNPLRILNTMLKLNPYAKTARRMSLLAEAERVKAKKEKLD 363

Query: 637 KKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 682
           KKR   +KEEA++IKAAGKAWYQTMISDSDYTEFDNF+KWLGVSQ
Sbjct: 364 KKRKPISKEEASTIKAAGKAWYQTMISDSDYTEFDNFTKWLGVSQ 408

[Close]

BLAST of Cp4.1LG19g04290 vs. ExPASy Swiss-Prot
Match: Q9SF40 (60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1)

HSP 1 Score: 675.6 bits (1742), Expect = 5.7e-193
Identity = 339/406 (83.50%), Postives = 378/406 (93.10%), Query Frame = 0


Query: 276 MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 335
           MA AAARPLV++Q+L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 336 KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 395
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 396 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 455
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 456 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 515
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 516 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 575
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 576 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 635
           SDE+QSVV PIKK  KRA LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 636 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 682
            KKR   TKEEA +IKAAGK+WY+TMISDSDYTEFDNF+KWLG SQ
Sbjct: 361 AKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of Cp4.1LG19g04290 vs. ExPASy Swiss-Prot
Match: P49691 (60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2)

HSP 1 Score: 672.9 bits (1735), Expect = 3.7e-192
Identity = 339/406 (83.50%), Postives = 376/406 (92.61%), Query Frame = 0


Query: 276 MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 335
           +A AAARPLV+VQ L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 336 KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 395
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 396 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 455
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 456 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 515
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 516 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 575
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 576 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 635
           SDEVQSVV PIK   KRA LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 636 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 682
           +KKR + TKEEA +IKAAGKAWYQTMISDSDYTEFDNF+KWLG SQ
Sbjct: 362 EKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of Cp4.1LG19g04290 vs. ExPASy Swiss-Prot
Match: P08429 (60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2)

HSP 1 Score: 437.2 bits (1123), Expect = 3.4e-121
Identity = 225/386 (58.29%), Postives = 290/386 (75.13%), Query Frame = 0


Query: 275 SMAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAV 334
           ++++A ARPL+SV S +G+    +   V +P V +A IRPDIV+FVH+N+ KN+RQPYAV
Sbjct: 2   AVSMACARPLISVYSEKGE---SSGKNVTMPAVFRAPIRPDIVNFVHTNLRKNNRQPYAV 61

Query: 335 SKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRK 394
           SK AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR+
Sbjct: 62  SKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRR 121

Query: 395 INVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQV 454
           +N  QKRYAV SA+AASA+P+L++++GHRIE +PE+PLVV D  E  +KT  A+ +LK++
Sbjct: 122 VNTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKL 181

Query: 455 GAFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVE 514
            A+ D +K   S  +R GKGKMRNRR I R+GP ++Y  E   LVKAFRNIPG+ + NV 
Sbjct: 182 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGLVKAFRNIPGITLLNVS 241

Query: 515 RLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRII 574
           +LNLL+LAPGGH+GRF IWT+SAF KLD +YG++ K ++ K  Y LP  KM N DL+RI+
Sbjct: 242 KLNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRIL 301

Query: 575 NSDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEK 634
            S E+Q  ++   K VKR  LKKNPLKNL  M++LNPYAKTARR A+L + + +KAK++K
Sbjct: 302 KSQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKK 361

Query: 635 LD-----KKRNLTTKEEATSIKAAGK 656
            D      K+ L  K +   +  A K
Sbjct: 362 PDDGKPKAKKPLDAKTKMIKLAKAKK 383

[Close]

BLAST of Cp4.1LG19g04290 vs. ExPASy Swiss-Prot
Match: P02385 (60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2)

HSP 1 Score: 436.8 bits (1122), Expect = 4.5e-121
Identity = 224/386 (58.03%), Postives = 290/386 (75.13%), Query Frame = 0


Query: 275 SMAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAV 334
           ++++A ARPL+SV S +G+    +   V +P V KA IRPDIV+FVH+N+ KN+RQPYAV
Sbjct: 2   AVSMACARPLISVYSEKGE---TSGKNVTMPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 61

Query: 335 SKRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRK 394
           SK AGHQTSAESWGTGRAV+RIPRV GGGTHR+GQGAFGNMCRGGRMFAPTK WRRWHR+
Sbjct: 62  SKLAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRR 121

Query: 395 INVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQV 454
           +N  QKRYAV SA+AASA+P+L++++GHRIE +PE+PLVV D  E  +KT  A+ +LK++
Sbjct: 122 VNTTQKRYAVCSALAASALPALIMSKGHRIEEIPEVPLVVEDKVESYKKTKEAVLLLKKL 181

Query: 455 GAFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVE 514
            A+ D +K   S  +R GKGKMRNRR I R+GP ++Y  E   ++KAFRNIPG+ + NV 
Sbjct: 182 KAWNDIKKVYASQRMRAGKGKMRNRRRIQRRGPCVIY-NENNGIIKAFRNIPGITLLNVS 241

Query: 515 RLNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRII 574
           +LNLL+LAPGGH+GRF IWT+SAF KLD +YG++ K ++ K  Y LP  KM N DL+RI+
Sbjct: 242 KLNLLRLAPGGHVGRFCIWTESAFRKLDDLYGTWRKSAKLKADYNLPMHKMTNTDLTRIL 301

Query: 575 NSDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEK 634
            S E+Q  ++   K VKR  LKKNPLKNL  M++LNPYAKTARR A+L + + +KAK++K
Sbjct: 302 KSQEIQRALRAPNKKVKRRELKKNPLKNLRIMMRLNPYAKTARRHAILQQLENIKAKEKK 361

Query: 635 LD-----KKRNLTTKEEATSIKAAGK 656
            D      K+ L  K +   +  A K
Sbjct: 362 PDDGKPKAKKPLDAKTKMIKLAKAKK 383

[Close]

BLAST of Cp4.1LG19g04290 vs. NCBI nr
Match: XP_022972645.1 (60S ribosomal protein L4-like [Cucurbita maxima] >XP_023517997.1 60S ribosomal protein L4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 783 bits (2022), Expect = 1.38e-280
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 276 MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 335
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 336 KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 395
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 396 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 455
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 456 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 515
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 516 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 575
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 576 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 635
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360

Query: 636 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 681
           DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Cp4.1LG19g04290 vs. NCBI nr
Match: XP_022963036.1 (60S ribosomal protein L4 [Cucurbita moschata])

HSP 1 Score: 782 bits (2019), Expect = 3.94e-280
Identity = 405/406 (99.75%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 276 MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 335
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVM+ASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 336 KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 395
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 396 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 455
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 456 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 515
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 516 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 575
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 576 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 635
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360

Query: 636 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 681
           DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Cp4.1LG19g04290 vs. NCBI nr
Match: KAG6595268.1 (60S ribosomal protein L4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 781 bits (2017), Expect = 2.04e-279
Identity = 405/405 (100.00%), Postives = 405/405 (100.00%), Query Frame = 0


Query: 276 MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 335
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 336 KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 395
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 396 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 455
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 456 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 515
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 516 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 575
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 576 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 635
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360

Query: 636 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 680
           DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS
Sbjct: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVS 405

[Close]

BLAST of Cp4.1LG19g04290 vs. NCBI nr
Match: XP_022925909.1 (60S ribosomal protein L4 [Cucurbita moschata] >XP_023544338.1 60S ribosomal protein L4 [Cucurbita pepo subsp. pepo] >KAG6604443.1 60S ribosomal protein L4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034587.1 60S ribosomal protein L4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 766 bits (1977), Expect = 9.23e-274
Identity = 395/403 (98.01%), Postives = 400/403 (99.26%), Query Frame = 0


Query: 279 AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 338
           AAARPLVSVQSLEGDMATDA P VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 3   AAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 339 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 398
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 399 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 458
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAA+KVLKQVGAFP
Sbjct: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAFP 182

Query: 459 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 518
           DAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 183 DAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 519 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 578
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302

Query: 579 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 638
           VQSVVKPIKK VKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 303 VQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362

Query: 639 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 681
           RNLTTKEEAT+IK+AGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 363 RNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of Cp4.1LG19g04290 vs. NCBI nr
Match: XP_038882700.1 (60S ribosomal protein L4 [Benincasa hispida])

HSP 1 Score: 763 bits (1969), Expect = 1.52e-272
Identity = 395/403 (98.01%), Postives = 399/403 (99.01%), Query Frame = 0


Query: 279 AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 338
           AAARPLVSVQSLEGDMATDAAP VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 339 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 398
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 399 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 458
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP
Sbjct: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182

Query: 459 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 518
           DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 519 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 578
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKM+NADLSRIINSDE
Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMMNADLSRIINSDE 302

Query: 579 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 638
           VQSVVKPIKK VKR  LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 303 VQSVVKPIKKNVKRPSLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362

Query: 639 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 681
           RNLTTKEEAT+I+AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 363 RNLTTKEEATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of Cp4.1LG19g04290 vs. ExPASy TrEMBL
Match: A0A6J1I983 (60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111471180 PE=3 SV=1)

HSP 1 Score: 783 bits (2022), Expect = 6.68e-281
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 276 MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 335
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 336 KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 395
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 396 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 455
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 456 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 515
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 516 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 575
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 576 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 635
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360

Query: 636 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 681
           DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Cp4.1LG19g04290 vs. ExPASy TrEMBL
Match: A0A6J1HEY8 (60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111463360 PE=3 SV=1)

HSP 1 Score: 782 bits (2019), Expect = 1.91e-280
Identity = 405/406 (99.75%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 276 MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 335
           MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVM+ASIRPDIVSFVHSNISKNSRQPYAVS
Sbjct: 1   MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMRASIRPDIVSFVHSNISKNSRQPYAVS 60

Query: 336 KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 395
           KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI
Sbjct: 61  KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 120

Query: 396 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 455
           NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG
Sbjct: 121 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 180

Query: 456 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 515
           AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER
Sbjct: 181 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 240

Query: 516 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 575
           LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 300

Query: 576 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 635
           SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL
Sbjct: 301 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 360

Query: 636 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 681
           DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ
Sbjct: 361 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 406

[Close]

BLAST of Cp4.1LG19g04290 vs. ExPASy TrEMBL
Match: A0A6J1EDI0 (60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111433183 PE=3 SV=1)

HSP 1 Score: 766 bits (1977), Expect = 4.47e-274
Identity = 395/403 (98.01%), Postives = 400/403 (99.26%), Query Frame = 0


Query: 279 AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 338
           AAARPLVSVQSLEGDMATDA P VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 3   AAARPLVSVQSLEGDMATDAVPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 339 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 398
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 399 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 458
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAA+KVLKQVGAFP
Sbjct: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAALKVLKQVGAFP 182

Query: 459 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 518
           DAEKAKDSH+IRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 183 DAEKAKDSHSIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 519 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 578
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302

Query: 579 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 638
           VQSVVKPIKK VKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 303 VQSVVKPIKKEVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362

Query: 639 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 681
           RNLTTKEEAT+IK+AGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 363 RNLTTKEEATTIKSAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of Cp4.1LG19g04290 vs. ExPASy TrEMBL
Match: A0A5A7TZA0 (60S ribosomal protein L4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00800 PE=3 SV=1)

HSP 1 Score: 761 bits (1964), Expect = 4.23e-272
Identity = 394/403 (97.77%), Postives = 398/403 (98.76%), Query Frame = 0


Query: 279 AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 338
           AAARPLVSVQSLEGDMATDAAP VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 339 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 398
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 399 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 458
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP
Sbjct: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182

Query: 459 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 518
           DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYG EGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGAEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 519 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 578
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302

Query: 579 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 638
           VQSVVKPIKK VKR  LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 303 VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362

Query: 639 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 681
           RNLTTKE+AT+I+AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 363 RNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of Cp4.1LG19g04290 vs. ExPASy TrEMBL
Match: A0A1S3BL28 (60S ribosomal protein L4-like OS=Cucumis melo OX=3656 GN=LOC103491208 PE=3 SV=1)

HSP 1 Score: 761 bits (1964), Expect = 4.23e-272
Identity = 394/403 (97.77%), Postives = 398/403 (98.76%), Query Frame = 0


Query: 279 AAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 338
           AAARPLVSVQSLEGDMATDAAP VPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA
Sbjct: 3   AAARPLVSVQSLEGDMATDAAPTVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVSKRA 62

Query: 339 GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 398
           GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN
Sbjct: 63  GHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVN 122

Query: 399 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 458
           QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP
Sbjct: 123 QKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVGAFP 182

Query: 459 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVERLNL 518
           DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYG EGAKLVKAFRNIPGVEIANVERLNL
Sbjct: 183 DAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGAEGAKLVKAFRNIPGVEIANVERLNL 242

Query: 519 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 578
           LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE
Sbjct: 243 LKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIINSDE 302

Query: 579 VQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 638
           VQSVVKPIKK VKR  LKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK
Sbjct: 303 VQSVVKPIKKNVKRPQLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKLDKK 362

Query: 639 RNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 681
           RNLTTKE+AT+I+AAGKAWYQTMISDSDYTEF+NFSKWLGVSQ
Sbjct: 363 RNLTTKEDATAIRAAGKAWYQTMISDSDYTEFENFSKWLGVSQ 405

[Close]

BLAST of Cp4.1LG19g04290 vs. TAIR 10
Match: AT3G09630.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 675.6 bits (1742), Expect = 4.1e-194
Identity = 339/406 (83.50%), Postives = 378/406 (93.10%), Query Frame = 0


Query: 276 MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 335
           MA AAARPLV++Q+L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 336 KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 395
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 396 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 455
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 456 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 515
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 516 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 575
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 576 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 635
           SDE+QSVV PIKK  KRA LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 636 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 682
            KKR   TKEEA +IKAAGK+WY+TMISDSDYTEFDNF+KWLG SQ
Sbjct: 361 AKKRKTVTKEEALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of Cp4.1LG19g04290 vs. TAIR 10
Match: AT5G02870.1 (Ribosomal protein L4/L1 family )

HSP 1 Score: 672.9 bits (1735), Expect = 2.6e-193
Identity = 339/406 (83.50%), Postives = 376/406 (92.61%), Query Frame = 0


Query: 276 MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 335
           +A AAARPLV+VQ L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 336 KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 395
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 396 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 455
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 456 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 515
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 516 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 575
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 576 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 635
           SDEVQSVV PIK   KRA LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 636 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 682
           +KKR + TKEEA +IKAAGKAWYQTMISDSDYTEFDNF+KWLG SQ
Sbjct: 362 EKKRKVVTKEEAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 407

[Close]

BLAST of Cp4.1LG19g04290 vs. TAIR 10
Match: AT3G09630.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 669.5 bits (1726), Expect = 2.9e-192
Identity = 338/406 (83.25%), Postives = 377/406 (92.86%), Query Frame = 0


Query: 276 MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 335
           MA AAARPLV++Q+L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 1   MAAAAARPLVTIQTLDGDMSTDQSSTVVLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 60

Query: 336 KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 395
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 61  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 120

Query: 396 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 455
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 121 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 180

Query: 456 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 515
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+VYGTEG+K+VKAFRN+PGVE+ +VER
Sbjct: 181 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVYGTEGSKIVKAFRNLPGVELCHVER 240

Query: 516 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 575
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 241 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 300

Query: 576 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 635
           SDE+QSVV PIKK  KRA LKKNPLKNLN MLKLNPYAKTA+RM+LLAE QRVKAKKEKL
Sbjct: 301 SDEIQSVVNPIKKDAKRAVLKKNPLKNLNVMLKLNPYAKTAKRMSLLAEAQRVKAKKEKL 360

Query: 636 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 682
            KKR   TK EA +IKAAGK+WY+TMISDSDYTEFDNF+KWLG SQ
Sbjct: 361 AKKRKTVTK-EALAIKAAGKSWYKTMISDSDYTEFDNFTKWLGASQ 405

[Close]

BLAST of Cp4.1LG19g04290 vs. TAIR 10
Match: AT5G02870.2 (Ribosomal protein L4/L1 family )

HSP 1 Score: 666.8 bits (1719), Expect = 1.9e-191
Identity = 338/406 (83.25%), Postives = 375/406 (92.36%), Query Frame = 0


Query: 276 MAVAAARPLVSVQSLEGDMATDAAPGVPLPDVMKASIRPDIVSFVHSNISKNSRQPYAVS 335
           +A AAARPLV+VQ L+GDM+TD +  V LPDVM A +RPDIV+FVH+ IS NSRQPYAVS
Sbjct: 2   VASAAARPLVTVQGLDGDMSTDQSTTVTLPDVMTAPVRPDIVNFVHAQISNNSRQPYAVS 61

Query: 336 KRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKI 395
           K+AGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQ AFGNMCRGGRMFAPTKIWRRWHR++
Sbjct: 62  KKAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQAAFGNMCRGGRMFAPTKIWRRWHRRV 121

Query: 396 NVNQKRYAVVSAIAASAVPSLVLARGHRIESVPELPLVVSDSAEGVEKTSAAIKVLKQVG 455
           NVN KR+A+VSAIAA+AVP+LV+ARGH+IE+VPE+PLVVSDSAE VEKTSAAIKVLKQ+G
Sbjct: 122 NVNMKRHAIVSAIAATAVPALVMARGHKIENVPEMPLVVSDSAEAVEKTSAAIKVLKQIG 181

Query: 456 AFPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEIANVER 515
           A+ DAEKAK+S  IRPGKGKMRNRRYISRKGPL+V+GTEGAK+VKAFRN+PGVE+ +VER
Sbjct: 182 AYDDAEKAKNSIGIRPGKGKMRNRRYISRKGPLVVFGTEGAKIVKAFRNLPGVELCHVER 241

Query: 516 LNLLKLAPGGHLGRFVIWTKSAFEKLDSIYGSFEKPSEKKKGYVLPRSKMVNADLSRIIN 575
           LNLLKLAPGGHLGRFVIWTKSAFEKL+SIYGSFEKPSEKKKGYVLPR+KMVNADL+RIIN
Sbjct: 242 LNLLKLAPGGHLGRFVIWTKSAFEKLESIYGSFEKPSEKKKGYVLPRAKMVNADLARIIN 301

Query: 576 SDEVQSVVKPIKKAVKRAPLKKNPLKNLNAMLKLNPYAKTARRMALLAEEQRVKAKKEKL 635
           SDEVQSVV PIK   KRA LKKNPLKNLN M KLNPYAKTA+RM+LLAE  RVKAKKEKL
Sbjct: 302 SDEVQSVVNPIKDGSKRAVLKKNPLKNLNVMFKLNPYAKTAKRMSLLAEASRVKAKKEKL 361

Query: 636 DKKRNLTTKEEATSIKAAGKAWYQTMISDSDYTEFDNFSKWLGVSQ 682
           +KKR + TK EA +IKAAGKAWYQTMISDSDYTEFDNF+KWLG SQ
Sbjct: 362 EKKRKVVTK-EAQAIKAAGKAWYQTMISDSDYTEFDNFTKWLGASQ 406

[Close]

BLAST of Cp4.1LG19g04290 vs. TAIR 10
Match: AT5G02850.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 329.7 bits (844), Expect = 5.5e-90
Identity = 174/252 (69.05%), Postives = 205/252 (81.35%), Query Frame = 0


Query: 5   RTQLFEAVAELQEILDLQDSKQKIAYEMRAKDAALRAFANKLKDAEQVLDVLFDDYADYQ 64
           +TQLFEAV ELQEILDLQD+KQK+A E+++KD++L AFANKLKDAE+VLD+L DDY+DY+
Sbjct: 152 QTQLFEAVTELQEILDLQDAKQKVAREIKSKDSSLLAFANKLKDAERVLDMLVDDYSDYR 211

Query: 65  GHKRVKTTDDVE---NESLCSSTTVASQLKLSDILSYAHKISYTTFAPPEFGAGQAPLRG 124
             KR K  +D E   NES  SSTTV+SQLKL DIL+YAHKISYTTFAPPEFGAGQAPLRG
Sbjct: 212 KPKRSKIEEDDEDNDNESSSSSTTVSSQLKLKDILAYAHKISYTTFAPPEFGAGQAPLRG 271

Query: 125 ALPPAPQEEQMRASQLYSFADLDVGLPKSVESTEKTIEPMIEPPAPVPTDANPLALAGIQ 184
           ALPPAPQ+EQMRASQLY+FADLD+GLPK+VE+ EK +E +IEPP P       + ++ I 
Sbjct: 272 ALPPAPQDEQMRASQLYTFADLDIGLPKTVENMEKKVEALIEPPPP----PEAMDISAIH 331

Query: 185 GLLPPNITVPSGWKPGMPVELPRDLPMPPPGWKPGDPVPLPPLDSLPVARVDEPQLRHNA 244
            LLPPNI VPSGWKPGMPVELPRDLP+PPPGWKPGDPV LPPL+S+   R ++ Q     
Sbjct: 332 NLLPPNIAVPSGWKPGMPVELPRDLPLPPPGWKPGDPVVLPPLESIAAPRAEDHQ-HMRP 391

Query: 245 LPGLHRPQEPIQ 254
             GLHRP + IQ
Sbjct: 392 SQGLHRPPDVIQ 398

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g04290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XF97	1.5e-201	88.89	60S ribosomal protein L4 OS=Prunus armeniaca OX=36596 GN=RPL4 PE=2 SV=1	[more]
Q9SF40	5.7e-193	83.50	60S ribosomal protein L4-1 OS=Arabidopsis thaliana OX=3702 GN=RPL4A PE=1 SV=1	[more]
P49691	3.7e-192	83.50	60S ribosomal protein L4-2 OS=Arabidopsis thaliana OX=3702 GN=RPL4D PE=1 SV=2	[more]
P08429	3.4e-121	58.29	60S ribosomal protein L4-A OS=Xenopus laevis OX=8355 GN=rpl4-a PE=2 SV=2	[more]
P02385	4.5e-121	58.03	60S ribosomal protein L4-B OS=Xenopus laevis OX=8355 GN=rpl4-b PE=2 SV=2	[more]

BLAST of Cp4.1LG19g04290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022972645.1	1.38e-280	100.00	60S ribosomal protein L4-like [Cucurbita maxima] >XP_023517997.1 60S ribosomal p...	[more]
XP_022963036.1	3.94e-280	99.75	60S ribosomal protein L4 [Cucurbita moschata]	[more]
KAG6595268.1	2.04e-279	100.00	60S ribosomal protein L4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022925909.1	9.23e-274	98.01	60S ribosomal protein L4 [Cucurbita moschata] >XP_023544338.1 60S ribosomal prot...	[more]
XP_038882700.1	1.52e-272	98.01	60S ribosomal protein L4 [Benincasa hispida]	[more]

BLAST of Cp4.1LG19g04290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I983	6.68e-281	100.00	60S ribosomal protein L4-like OS=Cucurbita maxima OX=3661 GN=LOC111471180 PE=3 S...	[more]
A0A6J1HEY8	1.91e-280	99.75	60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111463360 PE=3 SV=1	[more]
A0A6J1EDI0	4.47e-274	98.01	60S ribosomal protein L4 OS=Cucurbita moschata OX=3662 GN=LOC111433183 PE=3 SV=1	[more]
A0A5A7TZA0	4.23e-272	97.77	60S ribosomal protein L4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BL28	4.23e-272	97.77	60S ribosomal protein L4-like OS=Cucumis melo OX=3656 GN=LOC103491208 PE=3 SV=1	[more]

BLAST of Cp4.1LG19g04290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09630.1	4.1e-194	83.50	Ribosomal protein L4/L1 family	[more]
AT5G02870.1	2.6e-193	83.50	Ribosomal protein L4/L1 family	[more]
AT3G09630.2	2.9e-192	83.25	Ribosomal protein L4/L1 family	[more]
AT5G02870.2	1.9e-191	83.25	Ribosomal protein L4/L1 family	[more]
AT5G02850.1	5.5e-90	69.05	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 621..641
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..371
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..349
None	No IPR available	PANTHER	PTHR19431:SF6	BNAC03G35890D PROTEIN	coord: 219..681
None	No IPR available	PANTHER	PTHR19431	60S RIBOSOMAL PROTEIN L4	coord: 219..681
IPR023574	Ribosomal protein L4 domain superfamily	GENE3D	3.40.1370.10		coord: 279..584 e-value: 1.6E-141 score: 472.7
IPR023574	Ribosomal protein L4 domain superfamily	SUPERFAMILY	52166	Ribosomal protein L4	coord: 285..543
IPR019258	Mediator complex, subunit Med4	PFAM	PF10018	Med4	coord: 7..139 e-value: 5.1E-6 score: 26.3
IPR002136	Ribosomal protein L4/L1e	PFAM	PF00573	Ribosomal_L4	coord: 302..542 e-value: 1.1E-39 score: 136.2
IPR025755	60S ribosomal protein L4, C-terminal domain	PFAM	PF14374	Ribos_L4_asso_C	coord: 556..628 e-value: 8.4E-29 score: 99.4
IPR013000	Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site	PROSITE	PS00939	RIBOSOMAL_L1E	coord: 396..422

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g04290.1	Cp4.1LG19g04290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003712	transcription coregulator activity