Cp4.1LG19g01730 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG19g01730
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	KH domain-containing protein
Location	Cp4.1LG19: 1359848 .. 1366278 (-)
RNA-Seq Expression	Cp4.1LG19g01730
Synteny	Cp4.1LG19g01730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCATTAACAATCATAGATTTTCCACATTTCAGCCTCCATATTTACAGGCATCCACCCTTGTACTCCTTAGCTCCGCCTCCGCCTCCCTCGTCGGAGCTCTCCTCATCCACCGTCTTCTCCGGCGTCATCGCCGCCTCAATCTTCCAAAGGCCCTTCTTCTACTTTCCAATCCCCAATTCTCTGTATCCGTCTCTGCTCAGAGCAATAAACACAAAGCGCTATGTCAGGTATGTACAGTACCAATTTCTCCCCGGCAAGAACTGCTTCGCCTCACATCAGAACCACTCCTGATGTCGAAAGGTACCTCCTCTGATAACCCACTTTCGAGAATTTCCCTTTCTTCTTATTTTTGTTTCATTTAGATTTTTGAGTTTGCTCAGCTTGATTGAGTTGATTACTCGCTGATTAATTGTTGAATAATTAATTCTCCTTTCATTCTTTGTTCTTTAATCTCTAGTCAGTACTTGTCGGAGCTTCTGGCAGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGCAGCCGACTTTTGAATCAAGGTACTGTTCTTCTCTGAATTTTCGGTGTTCTGAATATCCTTTTAGTGTTTTTGAGCTGCTTAGTTGTTGTGGAGATGTGTATTTGTATGTTTAGATCGGAACAGCTGGTGGGTTTTGAGCTGCGTAACAGTGATTGCTCTCTTTGTTCTTGAGTTTGGCTGTTGAATTGTGGATATGTTAGTGATGGATCATTTATTTCACATTCTACACTCGGGTTTTAATGATTAATCATCCTTTTTAAGTTTGTTTTTTTCTTGTTTTCCTTGTTTTCCTTGTTTTCCTTGTGTGCCGAAGGAAGAAAAATGTGTGTTGATAGTAATTTCATCTTATCTTTGATCATTTGTCATTTATTGTTTTTTCTCCCTTCATTACTTGAAAAGTAGAAATGGGTTGTTTTTTGTTTCTTATTCTGTGTTAGCCTATAATAAAAAAAAAAGATAAGTTAGAAATGTTTCTAAATAAATAAGAATGAGAGTTCAAAAATATTATGCAATGCATATCCATTTCAAAACAAAGAGCAAGCAAGACAAATCAGTGCGTGAAAACACAATCGAACGAGCTCTTTTGTATTTGATTCAATTGATTCAAGCTGAGGGCTCGTGGCACTAGGCGTGACTGTGTGTTCGTATTTGTTGGGAAATGTCAAGTTAATCTTGTTGACTTTCATTTTTTTTAGAACTAAGCAGACGCTTGCGTATTGGTAGCTTTGGTTTTGACTTGTGGTTTCTTGCCTTAGCTAACTTAATTCTTCTAAGAAATGAGGTCCAAAGCTTTATACATACCCATTCTGGTGGATTTTTCTTCTTAAATTTTTTAGAGATATATCTTGTTTACACTGATTTATTTTACAAAAAAATCTCTTCTGGTGTATCACGCTCATTAACAAATATACCATTAATAGACCAACATTGTCATGGCTAAGCATTTTCGAGTTTTTCTGTTATTCCAGTTTGAGACTAGAAGAAATGAAAGTTAAGCCATTAAGTTTGGTTTAGAATGTTGTAACAGTCAATATTTGACCTACTCATCAGTGGTGGAGGCTCAAATTCATGTAGACAATCTGCCCTTTGTTATATATATATATATATATATATATATATATGCACTGGATCCATCCGGCCCGGAATCCAATGAACCGATGGTTAACCCTCTTTTTTTAGTGATTGCCATAAAGAGAGAAGTTTGCGCTTTTTCCTTAGAAGAAAGGTCCTCAAAGCCTCTTCATTCCAATGAGAATGATGAAGAATCCAATAGCTCCTCTTAGGACCCACAATCATCGAGATTTGAGAAAGATTTGAAATCGGTGAGTGTTTGGGTCAGGTTGTGCGCACCTTGACTAAACTCACTGGACAACCGCTTGACTCTATTACGTTTAGTTGACATGAAAACTTGTAGGATATTTAATATTAAGAAGGTGGCCACTATGGATTGAGTCCATGGAGGTCAACCATGATGGTTTTTTGTTAGTCACTTATAAGTTAATAAGATCTTAATCTTTGACAAGAGAATTGAAGGATGTGTGTTGAATTTGGAAAATCTTTGCAACTGAAGGTTAGCCACTTAAGGTCATGAAGATCTGCAGTAGCTTAAGAAATCAATGCGTCGGAAATATGGTGCTGTTAATAGTTTTATATGCCTTTACTGGGACAAGATCTATTCTTTAGGTTGTCTTTGAGTTCTTAGGTTAAAAGTCGGTGCGACTTGAACTTCTGGAGACCTTCTTGGATTATTTTGCAAGTAATAATCACGCAATGTTCTAGGGGTCGAGCTTCAACCTCTATTTAAATTGCCAAATAGCGTATTAATGAACGTCATCTCGCTCTTAGTCCCTTCCAAATTGATCTTATTACAAATTACAGTTTTTCCTACTTATTCTTGTTCTCTGTAGTTAATGCACAAACAGATTTCTATATATTTCTGCTTTTCAATTCCGTCCGTAACTTCTCACTGCAAGCACTTTCAATGCAGAGATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGTGACCTCGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCGAACCTTATATCTAATGTTAGCAGTGCAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGGTAACTACTGTTGCAAAATCGAAACTTATTTGTAACTGGCTCCTGATACTTGTTGATCTCATCATTTTGAGTCCAATTTTACTATCTTTTGATATAGAGCAAACATATGCCATAGTTATTACTTGATAGATTAAAGGTAACAGTGAAATACCCCCTCTGGATTAAGCTTGTAGCTTTAGGGAAATCATTCTATTTTGTTGGTTCTCAATAAGGCAGTTTCATGTTTCTCAATTTGACTGTGTAGTAATACTATTTCATATACTTATTGAGATTTTGTATTCTTTCATTTCGTCTCAATGAAAGTTCGGTTTTCAAGTAAATGCACGTTATTTTACATAAAAACAAATATGTTTCCACAATCTGTTTTTTCTCGACGGCTGTTGACCTGAAAGATCTTGAGACTTTCTGGAGTCAAAAACATGCGGCAGTGTTTTTGATTATGAAAAGGGTGAAACTTGCCTATGTTAAGATCTTATCGTCTTGAGCCCTTCACTAGCATTGAACATCCAATCTGGAAAATAATATCCCAATGTCTTCCTTCAAAAATAAAAGAAGTGAGAGAGAATTTCTTTGTGAGATCGTTGGAGAGGGGAACGAAGCATTCCGTATAAGGGTGTGAAAACCTCTCCCTAATAGACGCGTTTTAAAACCGTGAGACTGACGGCATACGTAACGAGCCAAAGCAAACAGTATCTACTAGCGGTGGGCTTGAGCTATTACAAATAGTATTAGAGCTAGACACTGGGAAGTGTGTCAGCATGGATGTTGGGTCCCTAAGGGGGGTGGATTGTGAGATCCCACAACGGTTGGAGAGGAGAACGAAACATTCATTATAAGAGTGTAGAAGTCTCTCCTTAGTAGATGTGTTTTAAAATTGGGAGGTTGACAACGATACATAACGGGCCAAAGCATATAATATCTGCTAACGGTGGACTTGGGCTGTTACATCCTTTGACTTATCCAAGTCCGATTGTGATAGTACATACATTTTATTACTTTTCACTTGTGTGAGTTGGTCAAAAACTTCTTTCACCATTCTTGAGGATGATGTCTCACACTGGTTGCCCTAGTAGGTTCTCAACTTTAAAAATCAACTGAAAGCATCATCTATAAGACTGAAGAGCAGCCGTTTAGATGAATGCAAAGAGTAAAGATATAATTTATCATGCATTTATCCGTTCAAGTATGTGTAACGAATCTAGATAAACCGAACGTTTCTTGCAAAAATTGGCCTCTTACTGCATCGTTATTCAAGATAATTACAAGAACACTTGAAGAATGTTTCAACTACATACAGATTACATTATGAAAATGTTTTTCCAGGTTATTTCTCTCATTTTCAATTATTTCCTCTTCGTTTGTAATCCCCCGATCGTTTCCCAGTCCTTATATATGCTCATATAGAGAATTCTATTATGTTAATTTGTGCTCTGAACTGTTATTCTTAGTTTGTTTTTAAATCGTCTTAAGATGCTAGAACCTTTTGAAATATACAGCAGAGGTTAAGTAGACCCCCTGGGATGACAATGGACTGGCAAAGTGCACCTGCAAGTCCGAGCTCGCTCACAGTAAAGAGGATTCTACGTCTGGAAATACCCGTGGATACTTACCCCAATGTAAGTTCTGTCAAGTATGAATGGCGTTCTGTTTGCTGCGCGAACACATAAAAGGATGGACATATTAATACGTGAAGTTTCTGTTTTTTGTGGACGTCAGTTCAATTTTGTAGGGCGGCTTTTGGGACCTCGTGGTAATTCCTTGAAACGGGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGGTCGATAAAGGATCCAGACAAGGTATTATAACGATATTGCAATTTTGGTTTCATTGTATGTTATCGATATTGATTCACATGATGGGTCTATCACGAGTCGAAACTATTGAATACATATTTTTTCTTCTCTCATTGGATTGTTGTTGTTCAACTTTTACATTGTAAAGGAAGAGAAATTAAGGGGACGACCTGGCTATGAGCACTTGAACGAACCGTTGCACATCTTGATTGAGGGGGATTTACCAGTCAATATTGTTGATATAAGGCTCAGACAAGCACAGGAAATTATTGAAGAACTGCTCAAACCTGTGGTACGTTTTCAACGTTGGATTCTTTCTCGAGTGCTTTTATCACGTTTTTTGTTCTCAAAAGTATCATGTTTAGATAAGTGTTTTTTTGTTACCTAAGTAACTATCACGGATGTTGAGGATTGTTGGGGGAGGAGTCCCACATCGACTAATTAAAGGGTTGATCATGGGTTTATAAGTAAGGAATACATCTCCATTGGTACGAGGCCTTTTGGGGAAACCAAAAGCAAAGCTAGAGAGCTTATGCTGAAAGTGGACAATATCGTACCATTGTGGAGGGTTGTGATTTAGTCATGCCCTTAACTTAGTCATGTCAATAAAATTCTCAAATGTCGAACAATGAAGTTGTGAGCCTCAAAGGTGAAGTCAAAAGTGACTAAAGTGTTGAACAAAGGGTGTGCTTTGTTCGAGGGCTCCATAGGCCTTAGGAGAGGCTCTATTGTGTACTTTGTTCGAGTGGAAGATTGTTGGGAGAGGAGTCCCACATCGATTAATTAAGGGGTTGATCATGGGTTTATAAGTAAGGAATACATCTCCATTGGTACGAGACATTTTGGGGAAACCAAAAGCGAAGTCATGAGAGCTTATGCTCAAAGTGGACAACCTTATACTATTGTGGAGGGTCGTGATTTTTAACAACGGAAGCTCCTTAAAAGCCCTTTTAAGAGTGTAGAACGAAATAGTAAAGCGATTTGCCATCAAGCCATTCAAGGGATTATAATCGTACTTTTGCTGAACTTAAGCATAAAATTTAGTTGCAGCTTATTCACTTGTTTACTTCACTTGATTGGAGACCTTATGGTAGTTTACCTCCTTATGCGCTCTCTTTTATTTGCCCTTATATTCTTTCACTTTTTCTACTTTCGGTTACGGTTACGGTTACGGTTACGGTTACTCATCGAACAAAGTTGATATTTCTTTCAACGAATGATCGAACAAACTTCTGATTCTTTCGACATCTGAACCATCCATTTGCAGGACGAGAGCCACGATTACATTAAGAGGCAGCAGTTACGCGAACTCGCAATGCTAAACTCGAGCTTCCGAGAAGAAAGTCCAGGACCTGGTGGTAGTGTTTCTCCATTCAATTCAAGTGGAATGAAACGTGCCAAAACAGGTCGTTAAGCGCTCACATCAATCTCTACCCTAAACAATTTCCACCCCAGTCCAGAAATTCGGTCACTCGTATACCTCAAAGTGAATCACAACCAACTGTGTGACATTGCTACAACCACGAGAAAGGGGAGAGCCTAACTCGAGTTCCCGGTGAGCGTTCTGCTGGCTTTTTCTGTGTTTCTTTAATATTTTTGACAGAAAAGACTTGAAAAAGAAAATAAAAGAGAGGGTAAAAGAAAACAAAAAAAGTGTTAGTATCTGTAGGGAATTCTCATGTTGAGTGTAGGTTTGAATAGGTCAGTTTTTGCAACAAAGTTATATATTCATTGGATTTATTCTTGTGTTAGTGACTGCTGAGGAGTGTGTAGTTTCTACATTATTGATGAACAAACATGAAGAACATTAGGAAGTGATGATGTTGTACTGTTTGATATCTGTTAGGGTATTGTATGCAATGTCAATGTCAATTATATTTTTGGTGCTACTCAGTTTGTGTTTGCTATCAGTTTCATAATAGATTCTTCCTTT

mRNA sequence

GACCATTAACAATCATAGATTTTCCACATTTCAGCCTCCATATTTACAGGCATCCACCCTTGTACTCCTTAGCTCCGCCTCCGCCTCCCTCGTCGGAGCTCTCCTCATCCACCGTCTTCTCCGGCGTCATCGCCGCCTCAATCTTCCAAAGGCCCTTCTTCTACTTTCCAATCCCCAATTCTCTGTATCCGTCTCTGCTCAGAGCAATAAACACAAAGCGCTATGTCAGGTATGTACAGTACCAATTTCTCCCCGGCAAGAACTGCTTCGCCTCACATCAGAACCACTCCTGATGTCGAAAGTCAGTACTTGTCGGAGCTTCTGGCAGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGCAGCCGACTTTTGAATCAAGAGATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGTGACCTCGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCGAACCTTATATCTAATGTTAGCAGTGCAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGCAGAGGTTAAGTAGACCCCCTGGGATGACAATGGACTGGCAAAGTGCACCTGCAAGTCCGAGCTCGCTCACAGTAAAGAGGATTCTACGTCTGGAAATACCCGTGGATACTTACCCCAATTTCAATTTTGTAGGGCGGCTTTTGGGACCTCGTGGTAATTCCTTGAAACGGGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGGTCGATAAAGGATCCAGACAAGGAAGAGAAATTAAGGGGACGACCTGGCTATGAGCACTTGAACGAACCGTTGCACATCTTGATTGAGGGGGATTTACCAGTCAATATTGTTGATATAAGGCTCAGACAAGCACAGGAAATTATTGAAGAACTGCTCAAACCTGTGGACGAGAGCCACGATTACATTAAGAGGCAGCAGTTACGCGAACTCGCAATGCTAAACTCGAGCTTCCGAGAAGAAAGTCCAGGACCTGGTGGTAGTGTTTCTCCATTCAATTCAAGTGGAATGAAACGTGCCAAAACAGGTCGTTAAGCGCTCACATCAATCTCTACCCTAAACAATTTCCACCCCAGTCCAGAAATTCGGTCACTCGTATACCTCAAAGTGAATCACAACCAACTGTGTGACATTGCTACAACCACGAGAAAGGGGAGAGCCTAACTCGAGTTCCCGGTGAGCGTTCTGCTGGCTTTTTCTGTGTTTCTTTAATATTTTTGACAGAAAAGACTTGAAAAAGAAAATAAAAGAGAGGGTAAAAGAAAACAAAAAAAGTGTTAGTATCTGTAGGGAATTCTCATGTTGAGTGTAGGTTTGAATAGGTCAGTTTTTGCAACAAAGTTATATATTCATTGGATTTATTCTTGTGTTAGTGACTGCTGAGGAGTGTGTAGTTTCTACATTATTGATGAACAAACATGAAGAACATTAGGAAGTGATGATGTTGTACTGTTTGATATCTGTTAGGGTATTGTATGCAATGTCAATGTCAATTATATTTTTGGTGCTACTCAGTTTGTGTTTGCTATCAGTTTCATAATAGATTCTTCCTTT

Coding sequence (CDS)

ATGTCAGGTATGTACAGTACCAATTTCTCCCCGGCAAGAACTGCTTCGCCTCACATCAGAACCACTCCTGATGTCGAAAGTCAGTACTTGTCGGAGCTTCTGGCAGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGCAGCCGACTTTTGAATCAAGAGATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGTGACCTCGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCGAACCTTATATCTAATGTTAGCAGTGCAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGCAGAGGTTAAGTAGACCCCCTGGGATGACAATGGACTGGCAAAGTGCACCTGCAAGTCCGAGCTCGCTCACAGTAAAGAGGATTCTACGTCTGGAAATACCCGTGGATACTTACCCCAATTTCAATTTTGTAGGGCGGCTTTTGGGACCTCGTGGTAATTCCTTGAAACGGGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGGTCGATAAAGGATCCAGACAAGGAAGAGAAATTAAGGGGACGACCTGGCTATGAGCACTTGAACGAACCGTTGCACATCTTGATTGAGGGGGATTTACCAGTCAATATTGTTGATATAAGGCTCAGACAAGCACAGGAAATTATTGAAGAACTGCTCAAACCTGTGGACGAGAGCCACGATTACATTAAGAGGCAGCAGTTACGCGAACTCGCAATGCTAAACTCGAGCTTCCGAGAAGAAAGTCCAGGACCTGGTGGTAGTGTTTCTCCATTCAATTCAAGTGGAATGAAACGTGCCAAAACAGGTCGTTAA

Protein sequence

MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR

Homology

[Close]

BLAST of Cp4.1LG19g01730 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 3.0e-127
Identity = 227/284 (79.93%), Postives = 251/284 (88.38%), Query Frame = 0


Query: 1   MSGMYS-TNFSPARTASPHIRT-TPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEI 60
           MSG+Y+  NFSP+R ASP IRT + DV+SQY+S+LLAEHQK GPFMQVLPICSRLLNQEI
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 61  LRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTM 120
            R++GMM NQGF D DRLRHRSPSPMAS NL+SNVS  GL GWNGLP E R+  P GM M
Sbjct: 61  FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPE-RIGGPHGMAM 120

Query: 121 DWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGK 180
           +WQ APASPSS  VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVE TTGCRVYIRGK
Sbjct: 121 EWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 180

Query: 181 GSIKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESH 240
           GSIKDP+KEEKL+G+PGYEHLNE LHILIE DLP++IVDI+LRQAQEIIEEL+KPVDES 
Sbjct: 181 GSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQ 240

Query: 241 DYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 283
           DYIKRQQLRELA+LNS+ RE SPGP GSVSPFNS+ MKR KTGR
Sbjct: 241 DYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of Cp4.1LG19g01730 vs. ExPASy Swiss-Prot
Match: Q9ZVI3 (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 9.5e-126
Identity = 237/287 (82.58%), Postives = 255/287 (88.85%), Query Frame = 0


Query: 1   MSGMY--STNFSPARTASPHIRTTPDVE-SQYLSELLAEHQKFGPFMQVLPICSRLLNQE 60
           MSG+Y  S+ FSPAR ASP IR+TP+++ SQYL+ELLAEHQK  PFMQVLPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMT 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNL+SNVS+ GL GWNGL QE RLS  PGMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRG 180
           MDWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSIKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDES 240
           KGSIKDP+KE+KLRGRPGYEHLNE LHILIE DLP +IV+IRLRQAQEIIEELLKPVDES
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDES 240

Query: 241 HDYIKRQQLRELAMLNS-SFREESPGP--GGSVSPFNSSGMKRAKTG 282
            D+IKRQQLRELA+LNS + REESPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 QDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Cp4.1LG19g01730 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 2.7e-112
Identity = 205/283 (72.44%), Postives = 237/283 (83.75%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTP-DVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEIL 60
           MSG+YS  FSPAR  SP IR+ P DV+SQYL+ELLAEHQK GPFMQVLPICS+LL+QEI+
Sbjct: 1   MSGLYSPGFSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIM 60

Query: 61  RVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMD 120
           RVS ++ N GF D DR R RSPSPM+S N  SN S  G S WNGL QE RL  P G +MD
Sbjct: 61  RVSSIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQE-RLGFPQGTSMD 120

Query: 121 WQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKG 180
           WQ AP SPSS  VK+ILRL++PVD+YPNFNFVGR+LGPRGNSLKRVE +TGCRV+IRGKG
Sbjct: 121 WQGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFIRGKG 180

Query: 181 SIKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHD 240
           SIKDP KE+KLRG+PGYEHL++PLHILIE + P +I+D RLR AQE+IEELLKPVDES D
Sbjct: 181 SIKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVDESQD 240

Query: 241 YIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 283
           + KRQQLRELAMLNS+ RE+SP P GSVSPF++ GMKRAKTG+
Sbjct: 241 FYKRQQLRELAMLNSTLREDSPHP-GSVSPFSNGGMKRAKTGQ 281

[Close]

BLAST of Cp4.1LG19g01730 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.9e-78
Identity = 156/280 (55.71%), Postives = 198/280 (70.71%), Query Frame = 0


Query: 2   SGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILRV 61
           S   S NFS    + P        + +YLSELLAE  K  PF+ VLP   RL+NQEILRV
Sbjct: 37  SAPQSPNFSGGLRSQPSFLVE---QEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRV 96

Query: 62  SGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGW-NGLPQEQRLSRPPGMTMDW 121
           + ++ N     L + R   PSP+AS  +  N S A ++GW +  P E+ +S  P    +W
Sbjct: 97  TTLLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVSSSP--APNW 156

Query: 122 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 181
            ++P S S L VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVE +T CRV IRG+GS
Sbjct: 157 LNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGS 216

Query: 182 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 241
           IKDP KE+ +RG+PGYEHLNEPLHIL+E +LP+ IVD RL QA+EI+++LL PV+E+HD+
Sbjct: 217 IKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDF 276

Query: 242 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKT 281
            K+QQLRELA+LN S REE     GS+SP+NS GMKRAKT
Sbjct: 277 YKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of Cp4.1LG19g01730 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.3e-77
Identity = 158/286 (55.24%), Postives = 202/286 (70.63%), Query Frame = 0


Query: 5   YSTNFS--PARTASPH----IRTTPDV---ESQYLSELLAEHQKFGPFMQVLPICSRLLN 64
           YS++ S  P+   SP+    +R+   V   + +YLSELLAE  K  PF+ VLP   RLLN
Sbjct: 32  YSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLN 91

Query: 65  QEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGW-NGLPQEQRLSRPP 124
           QEILRV+ ++ N        L H  PSP+AS  +  N + A ++GW +  P E+ +   P
Sbjct: 92  QEILRVTTLLENATVLSQSGLDH--PSPLASGGIFQN-ARADMNGWASQFPSERSVPSSP 151

Query: 125 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 184
           G   +W ++P S S L  KR +R++IPVD YPNFNFVGRLLGPRGNSLKRVE +T CRV 
Sbjct: 152 G--PNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVL 211

Query: 185 IRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPV 244
           IRG+GSIKDP KEE +RG+PGYEHLNEPLHIL+E +LP+ IVD RL QA+EI+++LL P+
Sbjct: 212 IRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPM 271

Query: 245 DESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKT 281
           +E+HD  K+QQLRELA+LN + REE     GSVSP+NS GMKRAKT
Sbjct: 272 EETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

[Close]

BLAST of Cp4.1LG19g01730 vs. NCBI nr
Match: XP_023518806.1 (KH domain-containing protein At3g08620-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 565 bits (1455), Expect = 5.68e-203
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240

Query: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Cp4.1LG19g01730 vs. NCBI nr
Match: XP_022925242.1 (KH domain-containing protein At3g08620-like isoform X1 [Cucurbita moschata] >KAG7027519.1 KH domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 563 bits (1452), Expect = 1.63e-202
Identity = 281/282 (99.65%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDV+SQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240

Query: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Cp4.1LG19g01730 vs. NCBI nr
Match: XP_022966419.1 (KH domain-containing protein At3g08620-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 561 bits (1447), Expect = 9.41e-202
Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDV+SQYLSELLAEHQKFGPFM VLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMHVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240

Query: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Cp4.1LG19g01730 vs. NCBI nr
Match: XP_023518807.1 (KH domain-containing protein At3g08620-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 558 bits (1438), Expect = 2.14e-200
Identity = 281/282 (99.65%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQE RLSRPPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQE-RLSRPPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240

Query: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cp4.1LG19g01730 vs. NCBI nr
Match: XP_022925243.1 (KH domain-containing protein At3g08620-like isoform X2 [Cucurbita moschata] >KAG6595538.1 KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 557 bits (1435), Expect = 6.13e-200
Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDV+SQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQE RLSRPPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQE-RLSRPPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240

Query: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cp4.1LG19g01730 vs. ExPASy TrEMBL
Match: A0A6J1EB88 (KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432543 PE=4 SV=1)

HSP 1 Score: 563 bits (1452), Expect = 7.88e-203
Identity = 281/282 (99.65%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDV+SQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240

Query: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Cp4.1LG19g01730 vs. ExPASy TrEMBL
Match: A0A6J1HTR7 (KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466075 PE=4 SV=1)

HSP 1 Score: 561 bits (1447), Expect = 4.56e-202
Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDV+SQYLSELLAEHQKFGPFM VLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMHVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240

Query: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Cp4.1LG19g01730 vs. ExPASy TrEMBL
Match: A0A6J1EEN1 (KH domain-containing protein At3g08620-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432543 PE=4 SV=1)

HSP 1 Score: 557 bits (1435), Expect = 2.97e-200
Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDV+SQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQE RLSRPPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQE-RLSRPPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240

Query: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cp4.1LG19g01730 vs. ExPASy TrEMBL
Match: A0A6J1HRK9 (KH domain-containing protein At3g08620-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466075 PE=4 SV=1)

HSP 1 Score: 555 bits (1430), Expect = 1.72e-199
Identity = 279/282 (98.94%), Postives = 280/282 (99.29%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDV+SQYLSELLAEHQKFGPFM VLPICSRLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMHVLPICSRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQE RLSRPPGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQE-RLSRPPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240

Query: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cp4.1LG19g01730 vs. ExPASy TrEMBL
Match: A0A1S3CIV3 (KH domain-containing protein At2g38610 OS=Cucumis melo OX=3656 GN=LOC103501485 PE=4 SV=1)

HSP 1 Score: 545 bits (1405), Expect = 1.11e-195
Identity = 273/282 (96.81%), Postives = 276/282 (97.87%), Query Frame = 0


Query: 1   MSGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILR 60
           MSGMYSTNFSPARTASPHIRTTPDV+SQYLSELLAEHQKFGPFMQVLPIC RLLNQEILR
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICGRLLNQEILR 60

Query: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTMDW 120
           VSGMMSNQGFCDLDRLRHRSPSPMASSNL+SNVSS GLSGWNGLPQE RLSR PGMTMDW
Sbjct: 61  VSGMMSNQGFCDLDRLRHRSPSPMASSNLMSNVSSTGLSGWNGLPQE-RLSRAPGMTMDW 120

Query: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180
           QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS
Sbjct: 121 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 180

Query: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 240
           IKDPDKEEKLRGRPGYEHLNEPLHILIE DLP N+VDIRLRQAQEIIEELLKPVDESHDY
Sbjct: 181 IKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANVVDIRLRQAQEIIEELLKPVDESHDY 240

Query: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282
           IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cp4.1LG19g01730 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 456.1 bits (1172), Expect = 2.1e-128
Identity = 227/284 (79.93%), Postives = 251/284 (88.38%), Query Frame = 0


Query: 1   MSGMYS-TNFSPARTASPHIRT-TPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEI 60
           MSG+Y+  NFSP+R ASP IRT + DV+SQY+S+LLAEHQK GPFMQVLPICSRLLNQEI
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 61  LRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMTM 120
            R++GMM NQGF D DRLRHRSPSPMAS NL+SNVS  GL GWNGLP E R+  P GM M
Sbjct: 61  FRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPE-RIGGPHGMAM 120

Query: 121 DWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGK 180
           +WQ APASPSS  VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVE TTGCRVYIRGK
Sbjct: 121 EWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGK 180

Query: 181 GSIKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESH 240
           GSIKDP+KEEKL+G+PGYEHLNE LHILIE DLP++IVDI+LRQAQEIIEEL+KPVDES 
Sbjct: 181 GSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDESQ 240

Query: 241 DYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 283
           DYIKRQQLRELA+LNS+ RE SPGP GSVSPFNS+ MKR KTGR
Sbjct: 241 DYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of Cp4.1LG19g01730 vs. TAIR 10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 451.1 bits (1159), Expect = 6.8e-127
Identity = 237/287 (82.58%), Postives = 255/287 (88.85%), Query Frame = 0


Query: 1   MSGMY--STNFSPARTASPHIRTTPDVE-SQYLSELLAEHQKFGPFMQVLPICSRLLNQE 60
           MSG+Y  S+ FSPAR ASP IR+TP+++ SQYL+ELLAEHQK  PFMQVLPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMT 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNL+SNVS+ GL GWNGL QE RLS  PGMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRG 180
           MDWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSIKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDES 240
           KGSIKDP+KE+KLRGRPGYEHLNE LHILIE DLP +IV+IRLRQAQEIIEELLKPVDES
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDES 240

Query: 241 HDYIKRQQLRELAMLNS-SFREESPGP--GGSVSPFNSSGMKRAKTG 282
            D+IKRQQLRELA+LNS + REESPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 QDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Cp4.1LG19g01730 vs. TAIR 10
Match: AT2G38610.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 451.1 bits (1159), Expect = 6.8e-127
Identity = 237/287 (82.58%), Postives = 255/287 (88.85%), Query Frame = 0


Query: 1   MSGMY--STNFSPARTASPHIRTTPDVE-SQYLSELLAEHQKFGPFMQVLPICSRLLNQE 60
           MSG+Y  S+ FSPAR ASP IR+TP+++ SQYL+ELLAEHQK  PFMQVLPICSRLLNQE
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 61  ILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPPGMT 120
           + RVSGMMSNQGF D DRLRHRSPSPMASSNL+SNVS+ GL GWNGL QE RLS  PGMT
Sbjct: 61  MFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLSGTPGMT 120

Query: 121 MDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRG 180
           MDWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGCRV+IRG
Sbjct: 121 MDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRVFIRG 180

Query: 181 KGSIKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDES 240
           KGSIKDP+KE+KLRGRPGYEHLNE LHILIE DLP +IV+IRLRQAQEIIEELLKPVDES
Sbjct: 181 KGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKPVDES 240

Query: 241 HDYIKRQQLRELAMLNS-SFREESPGP--GGSVSPFNSSGMKRAKTG 282
            D+IKRQQLRELA+LNS + REESPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 QDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Cp4.1LG19g01730 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 293.9 bits (751), Expect = 1.4e-79
Identity = 156/280 (55.71%), Postives = 198/280 (70.71%), Query Frame = 0


Query: 2   SGMYSTNFSPARTASPHIRTTPDVESQYLSELLAEHQKFGPFMQVLPICSRLLNQEILRV 61
           S   S NFS    + P        + +YLSELLAE  K  PF+ VLP   RL+NQEILRV
Sbjct: 37  SAPQSPNFSGGLRSQPSFLVE---QEKYLSELLAERHKLTPFLPVLPHVCRLMNQEILRV 96

Query: 62  SGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGW-NGLPQEQRLSRPPGMTMDW 121
           + ++ N     L + R   PSP+AS  +  N S A ++GW +  P E+ +S  P    +W
Sbjct: 97  TTLLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVSSSP--APNW 156

Query: 122 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 181
            ++P S S L VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVE +T CRV IRG+GS
Sbjct: 157 LNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGS 216

Query: 182 IKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPVDESHDY 241
           IKDP KE+ +RG+PGYEHLNEPLHIL+E +LP+ IVD RL QA+EI+++LL PV+E+HD+
Sbjct: 217 IKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDF 276

Query: 242 IKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKT 281
            K+QQLRELA+LN S REE     GS+SP+NS GMKRAKT
Sbjct: 277 YKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of Cp4.1LG19g01730 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 291.2 bits (744), Expect = 9.0e-79
Identity = 158/286 (55.24%), Postives = 202/286 (70.63%), Query Frame = 0


Query: 5   YSTNFS--PARTASPH----IRTTPDV---ESQYLSELLAEHQKFGPFMQVLPICSRLLN 64
           YS++ S  P+   SP+    +R+   V   + +YLSELLAE  K  PF+ VLP   RLLN
Sbjct: 32  YSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLN 91

Query: 65  QEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGW-NGLPQEQRLSRPP 124
           QEILRV+ ++ N        L H  PSP+AS  +  N + A ++GW +  P E+ +   P
Sbjct: 92  QEILRVTTLLENATVLSQSGLDH--PSPLASGGIFQN-ARADMNGWASQFPSERSVPSSP 151

Query: 125 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 184
           G   +W ++P S S L  KR +R++IPVD YPNFNFVGRLLGPRGNSLKRVE +T CRV 
Sbjct: 152 G--PNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVL 211

Query: 185 IRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPV 244
           IRG+GSIKDP KEE +RG+PGYEHLNEPLHIL+E +LP+ IVD RL QA+EI+++LL P+
Sbjct: 212 IRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPM 271

Query: 245 DESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKT 281
           +E+HD  K+QQLRELA+LN + REE     GSVSP+NS GMKRAKT
Sbjct: 272 EETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPYNSLGMKRAKT 312

The following BLAST results are available for this feature:

BLAST of Cp4.1LG19g01730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYR4	3.0e-127	79.93	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q9ZVI3	9.5e-126	82.58	KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38...	[more]
Q75GR5	2.7e-112	72.44	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q0WLR1	1.9e-78	55.71	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q9FKT4	1.3e-77	55.24	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]

BLAST of Cp4.1LG19g01730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023518806.1	5.68e-203	100.00	KH domain-containing protein At3g08620-like isoform X1 [Cucurbita pepo subsp. pe...	[more]
XP_022925242.1	1.63e-202	99.65	KH domain-containing protein At3g08620-like isoform X1 [Cucurbita moschata] >KAG...	[more]
XP_022966419.1	9.41e-202	99.29	KH domain-containing protein At3g08620-like isoform X1 [Cucurbita maxima]	[more]
XP_023518807.1	2.14e-200	99.65	KH domain-containing protein At3g08620-like isoform X2 [Cucurbita pepo subsp. pe...	[more]
XP_022925243.1	6.13e-200	99.29	KH domain-containing protein At3g08620-like isoform X2 [Cucurbita moschata] >KAG...	[more]

BLAST of Cp4.1LG19g01730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EB88	7.88e-203	99.65	KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1HTR7	4.56e-202	99.29	KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A6J1EEN1	2.97e-200	99.29	KH domain-containing protein At3g08620-like isoform X2 OS=Cucurbita moschata OX=...	[more]
A0A6J1HRK9	1.72e-199	98.94	KH domain-containing protein At3g08620-like isoform X2 OS=Cucurbita maxima OX=36...	[more]
A0A1S3CIV3	1.11e-195	96.81	KH domain-containing protein At2g38610 OS=Cucumis melo OX=3656 GN=LOC103501485 P...	[more]

BLAST of Cp4.1LG19g01730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08620.1	2.1e-128	79.93	RNA-binding KH domain-containing protein	[more]
AT2G38610.1	6.8e-127	82.58	RNA-binding KH domain-containing protein	[more]
AT2G38610.2	6.8e-127	82.58	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	1.4e-79	55.71	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	9.0e-79	55.24	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 132..232 e-value: 2.8E-6 score: 36.9
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 19..263 e-value: 4.1E-68 score: 231.4
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 139..255
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 23..70 e-value: 2.9E-13 score: 49.2
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 149..185 e-value: 1.2E-4 score: 21.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..282
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR11208:SF114	STAR PROTEIN, HOMODIMERIZATION REGION-RELATED	coord: 2..282
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 137..257 e-value: 5.18961E-53 score: 167.036
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 2..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG19g01730.1	Cp4.1LG19g01730.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding