Cp4.1LG19g01080 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG19g01080
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionthioredoxin-like 3-1, chloroplastic
LocationCp4.1LG19: 895516 .. 900244 (+)
RNA-Seq ExpressionCp4.1LG19g01080
SyntenyCp4.1LG19g01080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCCCACGTGTGGCCCCCAATTCACCCTATGGATAAGCCAAGCCCTTCCCTAAACGCTCCCATTTCAATCCCAAACCCCAAAAAACCTCAAAAAAGTAAAAGAAAAAACCCCTCTTCACAGATCGAAGCCATGACCTCCTAGGGAACAAGAAGAGAGGATCTACAGATATGTCTGTGTTGGCTGCGACCACTGCTCAGATTCTGTACAGCGAAGTTCATCACAATCAACACCAAATTCCGAGCAATGGGGGGAGGCGGTGTTTTGTGAACAGAGATTTTGGGTCTGTTTTATTTGGCCGGAGAAATGGGGAGCGGCGGAGGCTGCGGCGGAGGGAGTTCAGGATGGGGACGGAAGCTGGGTTTTGGCCGGATCTGTCCCGGCCGGCGATGGTGGAGATGGAGTCCATTGAGGATTCCGAGCAGCTTGATCGGATTTTGGCTCACGCCCAGGAACTGTCTCAGCCGGTTCTTATCGACTGGTTCGTATCTCTTCCTTCTTTTATCTCGAAAGGACTTAATCGTCATTTCACCCCCATTAGCTTAATTAGATTATTATTATTATTATTATTATTATTTTTAATAATAATAACTAAATTAATAAAAACATCTTTAAATATATTGTCTACAAAATATCAACATTAAAAAAATAAAATAAATAAAATAAAAAATATTAACATGAGTTTTAGATGAAAACAAATATTTATTAATACTCTTCGATTTTTTTAATTTTAAAACATACTATAAACGTCAGTAATATATTTTGAAATTTCATGAGTATTTTTTAAATATAGTATTAACGGTAAGAGTATTTTTAAACTTTTTTAAAAAAATTACGAATATTAATGAAACTTTTTAAAAAATTAATGATATTCTCGATAAACATTTTTGAAAGTTAGATGATATTTTTGAATTCATTTTAAAAGTTTAAGAGTATTTTTGAAACAAAATATTAACGGTAAGAGTATTTTTGAACTTTTTTTTGTTAAGCTTAGTCTTATTGAAACTTTTAAAAGTTCAGAATTGATTTTTTTAAAAACGGAAAATTTGATTTAGTTTCGTTGGTGGGTTGATATGTTTTTGGTCGGGTTTTGACCAACTCGAGAATAGGGCTACAACCCTACTCATTCTCTATACTGAGCTAAGTTGTGTCAGCATACCCTCGTTTAATTTGTTTTTTTTCGTGTTGGTTGTGAGTATCCTTATAATGAAGGAGACTATGTGTACGAGTAGGTGTTCGTGTATTAGATGTCGATAAATAAAATTAACATAAAATTATACTTAATTAAGGGTAATTAATCCAAATTGGAATGAATGGGGAATAGGATGGCAACGTGGTGTAGGAAATGCATCTACTTGAAGCCTAAATTGGAGAAACTTGCTGCTGATTATCTTACCAAGTAACATTTATTTTATTAACCTTTCATTTACGTGACAACAGCCGATATTGTCTTCTTTGGACTTCCCCTCAATGCTTTAAAATGCGTCTGCGAGGGAAAGGTTTTTCATACCTTTATAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTAGGACATCATAATAATAGTATCAGAGCTAGACACTGGACGATGTGCCAGCCTTCTCGTTGTTCCCCGAAAGGGGTAGACATAAGGCGGTGTGCCAGTAAGGACGCTGGGCCTCAAAGGGGGGCGGTCCCACATTGATTGGAGGAAGGAAAGAGTGCCAGCGAGGACACTGGGTCCCGAAGGAGGTGGATTGTGATGTCCCACATTGGTTGGGGAGAACAAACCACTATTTATAAAGGTGTGGAAACTTTCCCCTGACAGTTTTAAAGTCTTGAGGGAAGCTCGAAAGGGAAAGCCCAAAGAGAACAATATCTGCTAGTGGTGGATCTGGGTCGTTACTATTTATTTATTTTAATTATTTACTAACTTTTCTCAAAAAAAAAAAAAAAAAAAAAAATTTTGCAGAGCAAAATTTTACTATGTGGATGTGAATAAGGTCCCTCAATCTCTAGTTAAACGTGGAAACATCTCTGTAAGTATACATATACATATATATATATGCATATACATATATATATATATATGCATATACATATATATATGTATATATATATATATATATATATATATATTTGAGTTCTTCAAATCCTTTAAGTTATTAATTTATATATGTTCTCATTATGCAGAAAATGCCAACAATTCAGGTGATCAATTTTATTTATTATTATTTTTTAAATTTTAGATTATAAATTGTTAAATATCTTGTATTTCTTTTGAAAAATCAGTTTCGGGTGTTGATTTTACGTTCTTAAAATCGTTTGGAAGTGCTTTTCGATCAAACTCTCGGGTCAAAAGCTTTGAAGAAGTGCTTTCTCTAAATATTTGACTCTCGTATTATTTTTTAGTTTTGTTGAGTACCCGAAACGTCTTTTTGGGTCGAGAGAGGGACAAATAAGGTAGTTAAAAATTTTGCAAAATTATTGTTTTAGCTTTGGAAGGATGGAGAAATGAAAGCAGAAGTGATTGGAGGGCACAAAGCTTGGCTTGTGATCGAAGAAGTTAAAGAAATGATTCAAAAGTTTGTTTAGATCACGAGAAACACGTTCCTCGTTCTGTTTGATTGTTTAGTCTCTGGGCGGCTCTCGTCTTCAACCTTTCATAGGCCAAATGGTTCTCAAGACTTCATTTTTTTCGTTTATAAGTTGTTATCTTCTGAAAATTTAATGTACATGTATTATAAAAAAGAAAATATCAATGTCAATGAAAATATTAACGAACTTGATAACTATTTATCTAGCTAAGATGGATGCTTCAATGCCCTACCACGCCAGGGTTGAAAACAAGCAACCAACTAGTATTCAATTTGAGTAGTTTAATCACACACTTACGAGAGGTCATTCAGGACATGTATCTTCTGAATTTGGACCGCTATAGATCAACTAAAAAAGAAAAAAAAACTTAAACCCAATTAGTTTTGAATGTATCCAGTCAAATTGGCTAGCAAATAAATCAACCTGACACGAGTTGAGTGTATTTGAACAAGACGAAATAATCCACACTCACTTACCCATTGTCATGTACGACATTGCATAGTGCATCAACCACAATCGTAGTCATAATCATCACACCTTCCAATAACTACAAAGTAGACTCATTTTGAGGTAGATGTCATTGAAAGTTCAACGACACGTGGGGTGAAGACATTCAAACCTCTAATCTTTTAAGTCGATAGCCTATGTCTTGAACAATTAAACTATGCTCAAATTGAGTACGTAGACTCATAATTACATCTGGTTCAATACTAATTCAATGATTCATATAGTGTATCAAAAGATGTTTGCACGTAGCACAATAGTATCCAGCATTTCCTCTCCTCTGTGGCATATCCTCTAACCATGTTGACTCACTTCAATCCTTCCGAATATTATTGTCTCAAACATGCACTAAACATTCAAGTTAACTCGGCCTAAAAATCTACCAAAGAGGATGTTTACCAACACGGACCACCTCCATTGTGAATGTAACAGTCCAGCCTACCGCTAACAGATATTGTCTTTTTTGAGCTTTCATTTTTGGACTTCCCCTCAAGGTTTTAAAATGTGTCCACCTGGGAAAGGCATCCACACTTTTATAAGGAATGCTTTGTTCCCCTCTCCAACCGACGTGGAGTCCCACAATCCACTCCACTTGAGGGCCAATGTCCTCACAGGCACGCCATTACACCACATCTTCATTCATTTTTTTTTTCTCATTCAATTTAGGGAAGAGCAAAAAAAAATTCATACCAACTTCAGCTACTTTATATCAGTACAGTTGCCAAGTACTACACACTTAAAGAGCAAAGTCGAAATAAAAGCAGATAATCACGCTACTAGCAACCAAAAATTAATTAATAGCCTTGAAGTAATTTCATTCGCATGTCTTTAGAATACTGTTATGTTTTAGTTTTTCTAAAGTATTTAATTTAAGACAGAAAGAGTGAGAGAAATTTCGTCCCAAATTTAGAAAGAAATGATGTATAGCAGATCTTCTAATTAAATCATCATTCATGAACCATTTTAAGCCAAGGCAGCTAGTATCTGTTCTATTTACTTATTTTTGCATATACATACCAGAATTTCTTCTGAACACTTCAGAAATGAGAAAAATTTACCAATTTTTTTAAAAAGAATTGAAAATCCTTTTAACAAATAAAAAATGAGCTCTGATGCAAGGAAACAGAGGTAAAGGGTATTTTGTATCCTGTCGAATACTTAACTACCTTTCCCAATGTCAACTTCATACTCAGACAACCTAAAACATAACATAAAATCAAAACCCTATAGGATATATTTCATGATATTGGTACCTTAACTAAGTACTAAACAATTCTATATTTGTGAGATCGCCTTAATAAAGTGGAGAATGGAAAAAAAGATCAAATAGAATGTACATAATGTACCGAATTACGTCGTACGAGCACCATGTGTCCTCGATGCCCAAATGCCGAACAACACCAGGAACAAAAAGATGAACAAAATAGCCCAATATCGTGCAAGACTGTATTTTATCCTGGTAAGCACAAACTAGATAAATGGAAGGAATAGAAGTCAGAAGGCTGAGCATTGAAGTTTATATTTCCAGAAGTAAACAAAAAATAAGAAATTAGATTTGATGTTTCCAAAATTTATATATAAATCAGAAACGTTCAAAATTAAAAAAAGGACTCGAAGAGTTTTAAAAAAAAGACTAAACGTGTTTATA

mRNA sequence

CCTCCCACGTGTGGCCCCCAATTCACCCTATGGATAAGCCAAGCCCTTCCCTAAACGCTCCCATTTCAATCCCAAACCCCAAAAAACCTCAAAAAAGTAAAAGAAAAAACCCCTCTTCACAGATCGAAGCCATGACCTCCTAGGGAACAAGAAGAGAGGATCTACAGATATGTCTGTGTTGGCTGCGACCACTGCTCAGATTCTGTACAGCGAAGTTCATCACAATCAACACCAAATTCCGAGCAATGGGGGGAGGCGGTGTTTTGTGAACAGAGATTTTGGGTCTGTTTTATTTGGCCGGAGAAATGGGGAGCGGCGGAGGCTGCGGCGGAGGGAGTTCAGGATGGGGACGGAAGCTGGGTTTTGGCCGGATCTGTCCCGGCCGGCGATGGTGGAGATGGAGTCCATTGAGGATTCCGAGCAGCTTGATCGGATTTTGGCTCACGCCCAGGAACTGTCTCAGCCGGTTCTTATCGACTGAGCAAAATTTTACTATGTGGATGTGAATAAGGTCCCTCAATCTCTAGTTAAACGTGGAAACATCTCTAAAATGCCAACAATTCAGCTTTGGAAGGATGGAGAAATGAAAGCAGAAGTGATTGGAGGGCACAAAGCTTGGCTTGTGATCGAAGAAGTTAAAGAAATGATTCAAAAGTTTGTTTAGATCACGAGAAACACGTTCCTCGTTCTGTTTGATTGTTTAGTCTCTGGGCGGCTCTCGTCTTCAACCTTTCATAGGCCAAATGGTTCTCAAGACTTCATTTTTTTCGTTTATAAGTTGTTATCTTCTGAAAATTTAATGTACATGTATTATAAAAAAGAAAATATCAATGTCAATGAAAATATTAACGAACTTGATAACTATTTATCTAGCTAAGATGGATGCTTCAATGCCCTACCACGCCAGGGTTGAAAACAAGCAACCAACTAGTATTCAATTTGAGTAGTTTAATCACACACTTACGAGAGGTCATTCAGGACATGTATCTTCTGAATTTGGACCGCTATAGATCAACTAAAAAAGAAAAAAAAACTTAAACCCAATTAGTTTTGAATGTATCCAGTCAAATTGGCTAGCAAATAAATCAACCTGACACGAGTTGAGTGTATTTGAACAAGACGAAATAATCCACACTCACTTACCCATTGTCATGTACGACATTGCATAGTGCATCAACCACAATCGTAGTCATAATCATCACACCTTCCAATAACTACAAAGTAGACTCATTTTGAGGTAGATGTCATTGAAAGTTCAACGACACGTGGGGTGAAGACATTCAAACCTCTAATCTTTTAAGTCGATAGCCTATGTCTTGAACAATTAAACTATGCTCAAATTGAGTACGTAGACTCATAATTACATCTGGTTCAATACTAATTCAATGATTCATATAGTGTATCAAAAGATGTTTGCACGTAGCACAATAGTATCCAGCATTTCCTCTCCTCTGTGGCATATCCTCTAACCATGTTGACTCACTTCAATCCTTCCGAATATTATTGTCTCAAACATGCACTAAACATTCAAGTTAACTCGGCCTAAAAATCTACCAAAGAGGATGTTTACCAACACGGACCACCTCCATTGTGAATGTAACAGTCCAGCCTACCGCTAACAGATATTGTCTTTTTTGAGCTTTCATTTTTGGACTTCCCCTCAAGGTTTTAAAATGTGTCCACCTGGGAAAGGCATCCACACTTTTATAAGGAATGCTTTGTTCCCCTCTCCAACCGACGTGGAGTCCCACAATCCACTCCACTTGAGGGCCAATGTCCTCACAGGCACGCCATTACACCACATCTTCATTCATTTTTTTTTTCTCATTCAATTTAGGGAAGAGCAAAAAAAAATTCATACCAACTTCAGCTACTTTATATCAGTACAGTTGCCAAGTACTACACACTTAAAGAGCAAAGTCGAAATAAAAGCAGATAATCACGCTACTAGCAACCAAAAATTAATTAATAGCCTTGAAGTAATTTCATTCGCATGTCTTTAGAATACTGTTATGTTTTAGTTTTTCTAAAGTATTTAATTTAAGACAGAAAGAGTGAGAGAAATTTCGTCCCAAATTTAGAAAGAAATGATGTATAGCAGATCTTCTAATTAAATCATCATTCATGAACCATTTTAAGCCAAGGCAGCTAGTATCTGTTCTATTTACTTATTTTTGCATATACATACCAGAATTTCTTCTGAACACTTCAGAAATGAGAAAAATTTACCAATTTTTTTAAAAAGAATTGAAAATCCTTTTAACAAATAAAAAATGAGCTCTGATGCAAGGAAACAGAGGTAAAGGGTATTTTGTATCCTGTCGAATACTTAACTACCTTTCCCAATGTCAACTTCATACTCAGACAACCTAAAACATAACATAAAATCAAAACCCTATAGGATATATTTCATGATATTGGTACCTTAACTAAGTACTAAACAATTCTATATTTGTGAGATCGCCTTAATAAAGTGGAGAATGGAAAAAAAGATCAAATAGAATGTACATAATGTACCGAATTACGTCGTACGAGCACCATGTGTCCTCGATGCCCAAATGCCGAACAACACCAGGAACAAAAAGATGAACAAAATAGCCCAATATCGTGCAAGACTGTATTTTATCCTGGTAAGCACAAACTAGATAAATGGAAGGAATAGAAGTCAGAAGGCTGAGCATTGAAGTTTATATTTCCAGAAGTAAACAAAAAATAAGAAATTAGATTTGATGTTTCCAAAATTTATATATAAATCAGAAACGTTCAAAATTAAAAAAAGGACTCGAAGAGTTTTAAAAAAAAGACTAAACGTGTTTATA

Coding sequence (CDS)

ATGTCTGTGTTGGCTGCGACCACTGCTCAGATTCTGTACAGCGAAGTTCATCACAATCAACACCAAATTCCGAGCAATGGGGGGAGGCGGTGTTTTGTGAACAGAGATTTTGGGTCTGTTTTATTTGGCCGGAGAAATGGGGAGCGGCGGAGGCTGCGGCGGAGGGAGTTCAGGATGGGGACGGAAGCTGGGTTTTGGCCGGATCTGTCCCGGCCGGCGATGGTGGAGATGGAGTCCATTGAGGATTCCGAGCAGCTTGATCGGATTTTGGCTCACGCCCAGGAACTGTCTCAGCCGGTTCTTATCGACTGA

Protein sequence

MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMGTEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID
Homology
BLAST of Cp4.1LG19g01080 vs. ExPASy Swiss-Prot
Match: Q9FG36 (Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE=2 SV=3)

HSP 1 Score: 48.5 bits (114), Expect = 5.2e-05
Identity = 18/39 (46.15%), Postives = 32/39 (82.05%), Query Frame = 0

Query: 65  FWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 104
           FW ++++P  +EME I + E+LD +L+HA++LSQP++I+
Sbjct: 86  FWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIE 124

BLAST of Cp4.1LG19g01080 vs. NCBI nr
Match: XP_023517975.1 (thioredoxin-like 3-1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206 bits (525), Expect = 7.49e-66
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0

Query: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMG 60
           MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMG
Sbjct: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMG 60

Query: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103
           TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103

BLAST of Cp4.1LG19g01080 vs. NCBI nr
Match: KAG7027572.1 (Thioredoxin-like 3-1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (510), Expect = 2.05e-64
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0

Query: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMG 60
           MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRE +MG
Sbjct: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103
            EAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103

BLAST of Cp4.1LG19g01080 vs. NCBI nr
Match: KAG6595600.1 (Thioredoxin-like 3-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 201 bits (510), Expect = 1.49e-63
Identity = 100/103 (97.09%), Postives = 101/103 (98.06%), Query Frame = 0

Query: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMG 60
           MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRE +MG
Sbjct: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103
            EAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103

BLAST of Cp4.1LG19g01080 vs. NCBI nr
Match: XP_022924923.1 (thioredoxin-like 3-1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 199 bits (506), Expect = 6.03e-63
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0

Query: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMG 60
           MSVLAATTAQILYSE HHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRE +MG
Sbjct: 1   MSVLAATTAQILYSEAHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103
            EAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103

BLAST of Cp4.1LG19g01080 vs. NCBI nr
Match: XP_022966464.1 (thioredoxin-like 3-1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 198 bits (503), Expect = 1.73e-62
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0

Query: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMG 60
           MSVLAA+TAQILYSEVHHNQHQI SNG RRCFVNRDFGSVLFGRRNGE+RRLRRREFRMG
Sbjct: 1   MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 60

Query: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103
           TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103

BLAST of Cp4.1LG19g01080 vs. ExPASy TrEMBL
Match: A0A6J1EDU4 (thioredoxin-like 3-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432326 PE=4 SV=1)

HSP 1 Score: 199 bits (506), Expect = 2.92e-63
Identity = 99/103 (96.12%), Postives = 100/103 (97.09%), Query Frame = 0

Query: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMG 60
           MSVLAATTAQILYSE HHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRE +MG
Sbjct: 1   MSVLAATTAQILYSEAHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103
            EAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103

BLAST of Cp4.1LG19g01080 vs. ExPASy TrEMBL
Match: A0A6J1HTV8 (thioredoxin-like 3-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466111 PE=4 SV=1)

HSP 1 Score: 198 bits (503), Expect = 8.36e-63
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0

Query: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMG 60
           MSVLAA+TAQILYSEVHHNQHQI SNG RRCFVNRDFGSVLFGRRNGE+RRLRRREFRMG
Sbjct: 1   MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 60

Query: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103
           TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103

BLAST of Cp4.1LG19g01080 vs. ExPASy TrEMBL
Match: A0A5A7V069 (Thioredoxin-like 3-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold496G00060 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 2.81e-29
Identity = 61/103 (59.22%), Postives = 73/103 (70.87%), Query Frame = 0

Query: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMG 60
           M VL A+++ ILY+++H  QHQ  SNG R  F+N DFG              RRRE R+ 
Sbjct: 1   MYVLGASSSHILYAQLH--QHQFLSNGKRCGFLNTDFGDH------------RRRELRIK 60

Query: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103
            EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ+LSQP+LID
Sbjct: 61  AEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILID 89

BLAST of Cp4.1LG19g01080 vs. ExPASy TrEMBL
Match: A0A5D3C8R2 (Thioredoxin-like 3-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold427G00010 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 7.23e-29
Identity = 61/103 (59.22%), Postives = 73/103 (70.87%), Query Frame = 0

Query: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMG 60
           M VL A+++ ILY+++H  QHQ  SNG R  F+N DFG              RRRE R+ 
Sbjct: 1   MYVLGASSSHILYAQLH--QHQFLSNGKRCGFLNTDFGDH------------RRRELRIK 60

Query: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103
            EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ+LSQP+LID
Sbjct: 61  AEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILID 89

BLAST of Cp4.1LG19g01080 vs. ExPASy TrEMBL
Match: A0A1S3B504 (thioredoxin-like 3-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486084 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 1.56e-28
Identity = 61/103 (59.22%), Postives = 73/103 (70.87%), Query Frame = 0

Query: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMG 60
           M VL A+++ ILY+++H  QHQ  SNG R  F+N DFG              RRRE R+ 
Sbjct: 1   MYVLGASSSHILYAQLH--QHQFLSNGKRCGFLNTDFGDH------------RRRELRIK 60

Query: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 103
            EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ+LSQP+LID
Sbjct: 61  AEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILID 89

BLAST of Cp4.1LG19g01080 vs. TAIR 10
Match: AT5G06690.1 (WCRKC thioredoxin 1 )

HSP 1 Score: 48.5 bits (114), Expect = 3.7e-06
Identity = 18/39 (46.15%), Postives = 32/39 (82.05%), Query Frame = 0

Query: 65  FWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 104
           FW ++++P  +EME I + E+LD +L+HA++LSQP++I+
Sbjct: 86  FWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIE 124

BLAST of Cp4.1LG19g01080 vs. TAIR 10
Match: AT5G06690.2 (WCRKC thioredoxin 1 )

HSP 1 Score: 48.5 bits (114), Expect = 3.7e-06
Identity = 18/39 (46.15%), Postives = 32/39 (82.05%), Query Frame = 0

Query: 65  FWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLID 104
           FW ++++P  +EME I + E+LD +L+HA++LSQP++I+
Sbjct: 86  FWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIE 124

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FG365.2e-0546.15Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE... [more]
Match NameE-valueIdentityDescription
XP_023517975.17.49e-66100.00thioredoxin-like 3-1, chloroplastic [Cucurbita pepo subsp. pepo][more]
KAG7027572.12.05e-6497.09Thioredoxin-like 3-1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6595600.11.49e-6397.09Thioredoxin-like 3-1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_022924923.16.03e-6396.12thioredoxin-like 3-1, chloroplastic [Cucurbita moschata][more]
XP_022966464.11.73e-6296.12thioredoxin-like 3-1, chloroplastic [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1EDU42.92e-6396.12thioredoxin-like 3-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11143232... [more]
A0A6J1HTV88.36e-6396.12thioredoxin-like 3-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466111 ... [more]
A0A5A7V0692.81e-2959.22Thioredoxin-like 3-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold496... [more]
A0A5D3C8R27.23e-2959.22Thioredoxin-like 3-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold427... [more]
A0A1S3B5041.56e-2859.22thioredoxin-like 3-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486084 PE=4... [more]
Match NameE-valueIdentityDescription
AT5G06690.13.7e-0646.15WCRKC thioredoxin 1 [more]
AT5G06690.23.7e-0646.15WCRKC thioredoxin 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044253Thioredoxin-like 3-1/3-2PANTHERPTHR47192THIOREDOXIN-LIKE 3-2, CHLOROPLASTICcoord: 1..103
NoneNo IPR availablePANTHERPTHR47192:SF3THIOREDOXIN-LIKE 3-1, CHLOROPLASTICcoord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG19g01080.1Cp4.1LG19g01080.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009570 chloroplast stroma