Homology
BLAST of Cp4.1LG18g09360 vs. ExPASy Swiss-Prot
Match:
Q9FI49 (Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H59 PE=2 SV=2)
HSP 1 Score: 302.8 bits (774), Expect = 8.9e-81
Identity = 184/516 (35.66%), Postives = 255/516 (49.42%), Query Frame = 0
Query: 108 STSKFTVKAGYQTLYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRA 167
S+S + + L +VLE+C+ +PSNSK + HA++ K GYG YP+L+ S V+AY+R
Sbjct: 20 SSSSASNLTDHGMLKQVLESCK-APSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRC 79
Query: 168 DCLNRVHQLLNLLCSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGG 227
+ +LL S + +NL I++ MKIGE LAK+V ++V+TWN +IGG
Sbjct: 80 NRSYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGG 139
Query: 228 CVKNARYEEAFKFFRQMLN-SNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIEL 287
V+N +YEEA K + ML+ ++I+P+ F+FAS L ACA+LG + +WVH+LM IEL
Sbjct: 140 YVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIEL 199
Query: 288 NSILSCALIDAYSKCGSIQIAKEIFSSVPRSNIS-------------------------- 347
N+ILS AL+D Y+KCG I ++E+F SV R+++S
Sbjct: 200 NAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEME 259
Query: 348 ----------------SC------------------------------------------ 407
+C
Sbjct: 260 AEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRV 319
Query: 408 ------------------------------------------------------------ 457
Sbjct: 320 KEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSST 379
BLAST of Cp4.1LG18g09360 vs. ExPASy Swiss-Prot
Match:
O23169 (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H5 PE=3 SV=1)
HSP 1 Score: 192.6 bits (488), Expect = 1.3e-47
Identity = 109/336 (32.44%), Postives = 157/336 (46.73%), Query Frame = 0
Query: 189 AMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQMLNSN 248
A + +D + K G + AK V D P D+V+W S+IGGC +N + +EA K+F +L S
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
Query: 249 IQPDGFTFASVLNACAQLG-APSNTQWVHALMTQKKIELNSILSCALIDAYSKCGSIQIA 308
+PD TF +VL+AC G ++ +++ + ++ S L+D ++ G +
Sbjct: 416 TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQL 475
Query: 309 KEIFSSVP--------RSNISSC------------------------------------- 368
K + S +P S + C
Sbjct: 476 KSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAA 535
Query: 369 ----------------------GKSWIELGGSIQSFKSGDRSHPESDAVYKVVWRLMKRS 428
G SW E+ F + D SHP + + + + L K+
Sbjct: 536 GKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKM 595
Query: 429 RSEGYMPVTDLVLMDISEEEKEENLSYHSEKLALAYAILKTSPGAKISISKNLRMCDDCH 457
+ EGY+P T LVL D+ +E+KEENL YHSEKLA+A+AIL T G I + KNLR C DCH
Sbjct: 596 KEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCH 655
BLAST of Cp4.1LG18g09360 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 191.0 bits (484), Expect = 3.8e-47
Identity = 132/508 (25.98%), Postives = 209/508 (41.14%), Query Frame = 0
Query: 120 TLYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNL 179
T +L+AC + S + ++ HA++ K GY N V SL+++Y H L +
Sbjct: 117 TFPSLLKACS-NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDR 176
Query: 180 LCSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFK 239
+ D V+ N I ++K G+ +A +F KM ++ ++W ++I G V+ +EA +
Sbjct: 177 I--PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQ 236
Query: 240 FFRQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYS 299
F +M NS+++PD + A+ L+ACAQLGA +W+H+ + + +I ++S+L C LID Y+
Sbjct: 237 LFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYA 296
Query: 300 KCGSIQIAKEIFSS---------------------------------------------- 359
KCG ++ A E+F +
Sbjct: 297 KCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTA 356
Query: 360 ------------------------------------------------------------ 419
Sbjct: 357 VLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLK 416
Query: 420 ----------------------------------------VPRSNISSCGKSW------- 457
V ++NI + K W
Sbjct: 417 PNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETR 476
BLAST of Cp4.1LG18g09360 vs. ExPASy Swiss-Prot
Match:
Q683I9 (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1)
HSP 1 Score: 190.7 bits (483), Expect = 4.9e-47
Identity = 133/502 (26.49%), Postives = 209/502 (41.63%), Query Frame = 0
Query: 131 SPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCSKHLDLVAM 190
+P + THA+++ FG P + TSL++ Y L ++ + SK DL A
Sbjct: 74 NPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK--DLPAW 133
Query: 191 NLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQML----- 250
N ++ + K G A+++FD+MP R+V++W+ +I G V +Y+EA FR+M
Sbjct: 134 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 193
Query: 251 NSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCGSIQ 310
+ ++P+ FT ++VL+AC +LGA +WVHA + + +E++ +L ALID Y+KCGS++
Sbjct: 194 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 253
Query: 311 IAKEIFSSV---------------------------------------PRS--------- 370
AK +F+++ P S
Sbjct: 254 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 313
Query: 371 ------------------------------------------------------------ 430
Sbjct: 314 CVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 373
Query: 431 -------------NISSC------------------------------------------ 457
+I +C
Sbjct: 374 IWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEME 433
BLAST of Cp4.1LG18g09360 vs. ExPASy Swiss-Prot
Match:
Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 1.3e-44
Identity = 124/498 (24.90%), Postives = 194/498 (38.96%), Query Frame = 0
Query: 130 LSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCSKHLDLVA 189
L ++K+ H ++KFG G P + T LV Y + + ++ + + + LV+
Sbjct: 137 LKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPER--SLVS 196
Query: 190 MNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQML-NSN 249
I + K G + A+ +FD M RD+V+WN +I G ++ +A F+++L
Sbjct: 197 STAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGK 256
Query: 250 IQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCGSIQIAK 309
+PD T + L+AC+Q+GA +W+H + +I LN + LID YSKCGS++ A
Sbjct: 257 PKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAV 316
Query: 310 EIFSSVPRSNI------------------------------------------------- 369
+F+ PR +I
Sbjct: 317 LVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHA 376
Query: 370 ------------------------------------------------------------ 429
Sbjct: 377 GLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSS 436
Query: 430 --SSC------------------------------------------------------- 457
SC
Sbjct: 437 VLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGI 496
BLAST of Cp4.1LG18g09360 vs. NCBI nr
Match:
XP_023516965.1 (pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 849 bits (2193), Expect = 2.41e-304
Identity = 454/620 (73.23%), Postives = 454/620 (73.23%), Query Frame = 0
Query: 3 SLYRCRRGKLKMLQKQRYLDRQRITSALLATSAYALPGPLRIPKVPLSSLLPFTSSPIHV 62
SLYRCRRGKLKMLQKQRYLDRQRITSALLATSAYALPGPLRIPKVPLSSLLPFTSSPIHV
Sbjct: 10 SLYRCRRGKLKMLQKQRYLDRQRITSALLATSAYALPGPLRIPKVPLSSLLPFTSSPIHV 69
Query: 63 HYTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVKAGYQTLY 122
HYTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVKAGYQTLY
Sbjct: 70 HYTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVKAGYQTLY 129
Query: 123 RVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCS 182
RVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCS
Sbjct: 130 RVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCS 189
Query: 183 KHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFR 242
KHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFR
Sbjct: 190 KHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFR 249
Query: 243 QMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCG 302
QMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCG
Sbjct: 250 QMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCG 309
Query: 303 SIQIAKEIFSSVPRSNIS------------------------------------------ 362
SIQIAKEIFSSVPRSNIS
Sbjct: 310 SIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTFLGILT 369
Query: 363 ------------------------------------------------------------ 422
Sbjct: 370 ACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMPIEADV 429
Query: 423 ------------------------------------------------------------ 456
Sbjct: 430 VTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNTYCSLNRWEHAERVRERMKSN 489
BLAST of Cp4.1LG18g09360 vs. NCBI nr
Match:
XP_023516963.1 (pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 844 bits (2180), Expect = 2.46e-302
Identity = 454/622 (72.99%), Postives = 454/622 (72.99%), Query Frame = 0
Query: 3 SLYRCRRGKLKMLQKQRYLDRQRITSALLATSAYALPGPLRIPKVPLSSLLPFTSSPIHV 62
SLYRCRRGKLKMLQKQRYLDRQRITSALLATSAYALPGPLRIPKVPLSSLLPFTSSPIHV
Sbjct: 10 SLYRCRRGKLKMLQKQRYLDRQRITSALLATSAYALPGPLRIPKVPLSSLLPFTSSPIHV 69
Query: 63 HYTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVKAG--YQT 122
HYTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVKAG YQT
Sbjct: 70 HYTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVKAGNGYQT 129
Query: 123 LYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLL 182
LYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLL
Sbjct: 130 LYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLL 189
Query: 183 CSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKF 242
CSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKF
Sbjct: 190 CSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKF 249
Query: 243 FRQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSK 302
FRQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSK
Sbjct: 250 FRQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSK 309
Query: 303 CGSIQIAKEIFSSVPRSNIS---------------------------------------- 362
CGSIQIAKEIFSSVPRSNIS
Sbjct: 310 CGSIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTFLGI 369
Query: 363 ------------------------------------------------------------ 422
Sbjct: 370 LTACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMPIEA 429
Query: 423 ------------------------------------------------------------ 456
Sbjct: 430 DVVTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNTYCSLNRWEHAERVRERMK 489
BLAST of Cp4.1LG18g09360 vs. NCBI nr
Match:
XP_022922013.1 (pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cucurbita moschata])
HSP 1 Score: 836 bits (2159), Expect = 3.56e-299
Identity = 447/619 (72.21%), Postives = 450/619 (72.70%), Query Frame = 0
Query: 4 LYRCRRGKLKMLQKQRYLDRQRITSALLATSAYALPGPLRIPKVPLSSLLPFTSSPIHVH 63
LYRCRR KLKMLQKQRY +RQRITSALLATSAYALPGPLRIP+VPLSSLLPFTSSPIHVH
Sbjct: 11 LYRCRRRKLKMLQKQRYSERQRITSALLATSAYALPGPLRIPRVPLSSLLPFTSSPIHVH 70
Query: 64 YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVKAGYQTLYR 123
YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTV+AGYQTLYR
Sbjct: 71 YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVEAGYQTLYR 130
Query: 124 VLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCSK 183
VLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCSK
Sbjct: 131 VLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCSK 190
Query: 184 HLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQ 243
HLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQ
Sbjct: 191 HLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQ 250
Query: 244 MLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCGS 303
MLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCGS
Sbjct: 251 MLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCGS 310
Query: 304 IQIAKEIFSSVPRSNIS------------------------------------------- 363
IQIAKEIFSSVPRSNIS
Sbjct: 311 IQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTFLGILTA 370
Query: 364 ------------------------------------------------------------ 423
Sbjct: 371 CNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMPIEADVV 430
Query: 424 ------------------------------------------------------------ 456
Sbjct: 431 TWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRERMKSNG 490
BLAST of Cp4.1LG18g09360 vs. NCBI nr
Match:
KAG7023021.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 833 bits (2153), Expect = 2.90e-298
Identity = 446/619 (72.05%), Postives = 450/619 (72.70%), Query Frame = 0
Query: 4 LYRCRRGKLKMLQKQRYLDRQRITSALLATSAYALPGPLRIPKVPLSSLLPFTSSPIHVH 63
LYRCRRGKLKMLQKQRY +RQRITSALLATSAYALPGPLRIP+VPLSSLLPFTSSPIHVH
Sbjct: 11 LYRCRRGKLKMLQKQRYSERQRITSALLATSAYALPGPLRIPRVPLSSLLPFTSSPIHVH 70
Query: 64 YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVKAGYQTLYR 123
YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANS SKFTV+AGYQTLYR
Sbjct: 71 YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSISKFTVEAGYQTLYR 130
Query: 124 VLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCSK 183
VLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCSK
Sbjct: 131 VLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCSK 190
Query: 184 HLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQ 243
HLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQ
Sbjct: 191 HLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQ 250
Query: 244 MLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCGS 303
MLNSNIQPDGFTFASVLNACAQLGAPS TQWVHALMTQKKIELNSILSCALIDAYSKCGS
Sbjct: 251 MLNSNIQPDGFTFASVLNACAQLGAPSITQWVHALMTQKKIELNSILSCALIDAYSKCGS 310
Query: 304 IQIAKEIFSSVPRSNIS------------------------------------------- 363
IQIA+EIFSSVPRSNIS
Sbjct: 311 IQIAREIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTFLGILTA 370
Query: 364 ------------------------------------------------------------ 423
Sbjct: 371 CNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMPIEADVV 430
Query: 424 ------------------------------------------------------------ 456
Sbjct: 431 TWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRERMKSNG 490
BLAST of Cp4.1LG18g09360 vs. NCBI nr
Match:
XP_022922012.1 (pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cucurbita moschata])
HSP 1 Score: 831 bits (2146), Expect = 3.62e-297
Identity = 447/621 (71.98%), Postives = 450/621 (72.46%), Query Frame = 0
Query: 4 LYRCRRGKLKMLQKQRYLDRQRITSALLATSAYALPGPLRIPKVPLSSLLPFTSSPIHVH 63
LYRCRR KLKMLQKQRY +RQRITSALLATSAYALPGPLRIP+VPLSSLLPFTSSPIHVH
Sbjct: 11 LYRCRRRKLKMLQKQRYSERQRITSALLATSAYALPGPLRIPRVPLSSLLPFTSSPIHVH 70
Query: 64 YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVKAG--YQTL 123
YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTV+AG YQTL
Sbjct: 71 YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVEAGNGYQTL 130
Query: 124 YRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLC 183
YRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLC
Sbjct: 131 YRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLC 190
Query: 184 SKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFF 243
SKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFF
Sbjct: 191 SKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFF 250
Query: 244 RQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKC 303
RQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKC
Sbjct: 251 RQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKC 310
Query: 304 GSIQIAKEIFSSVPRSNIS----------------------------------------- 363
GSIQIAKEIFSSVPRSNIS
Sbjct: 311 GSIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTFLGIL 370
Query: 364 ------------------------------------------------------------ 423
Sbjct: 371 TACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMPIEAD 430
Query: 424 ------------------------------------------------------------ 456
Sbjct: 431 VVTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRERMKS 490
BLAST of Cp4.1LG18g09360 vs. ExPASy TrEMBL
Match:
A0A6J1E5D9 (pentatricopeptide repeat-containing protein At5g50990 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430093 PE=3 SV=1)
HSP 1 Score: 836 bits (2159), Expect = 1.72e-299
Identity = 447/619 (72.21%), Postives = 450/619 (72.70%), Query Frame = 0
Query: 4 LYRCRRGKLKMLQKQRYLDRQRITSALLATSAYALPGPLRIPKVPLSSLLPFTSSPIHVH 63
LYRCRR KLKMLQKQRY +RQRITSALLATSAYALPGPLRIP+VPLSSLLPFTSSPIHVH
Sbjct: 11 LYRCRRRKLKMLQKQRYSERQRITSALLATSAYALPGPLRIPRVPLSSLLPFTSSPIHVH 70
Query: 64 YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVKAGYQTLYR 123
YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTV+AGYQTLYR
Sbjct: 71 YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVEAGYQTLYR 130
Query: 124 VLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCSK 183
VLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCSK
Sbjct: 131 VLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCSK 190
Query: 184 HLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQ 243
HLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQ
Sbjct: 191 HLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQ 250
Query: 244 MLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCGS 303
MLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCGS
Sbjct: 251 MLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCGS 310
Query: 304 IQIAKEIFSSVPRSNIS------------------------------------------- 363
IQIAKEIFSSVPRSNIS
Sbjct: 311 IQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTFLGILTA 370
Query: 364 ------------------------------------------------------------ 423
Sbjct: 371 CNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMPIEADVV 430
Query: 424 ------------------------------------------------------------ 456
Sbjct: 431 TWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRERMKSNG 490
BLAST of Cp4.1LG18g09360 vs. ExPASy TrEMBL
Match:
A0A6J1E1Y0 (pentatricopeptide repeat-containing protein At5g50990 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430093 PE=3 SV=1)
HSP 1 Score: 831 bits (2146), Expect = 1.75e-297
Identity = 447/621 (71.98%), Postives = 450/621 (72.46%), Query Frame = 0
Query: 4 LYRCRRGKLKMLQKQRYLDRQRITSALLATSAYALPGPLRIPKVPLSSLLPFTSSPIHVH 63
LYRCRR KLKMLQKQRY +RQRITSALLATSAYALPGPLRIP+VPLSSLLPFTSSPIHVH
Sbjct: 11 LYRCRRRKLKMLQKQRYSERQRITSALLATSAYALPGPLRIPRVPLSSLLPFTSSPIHVH 70
Query: 64 YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVKAG--YQTL 123
YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTV+AG YQTL
Sbjct: 71 YTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVEAGNGYQTL 130
Query: 124 YRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLC 183
YRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLC
Sbjct: 131 YRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLC 190
Query: 184 SKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFF 243
SKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFF
Sbjct: 191 SKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFF 250
Query: 244 RQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKC 303
RQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKC
Sbjct: 251 RQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKC 310
Query: 304 GSIQIAKEIFSSVPRSNIS----------------------------------------- 363
GSIQIAKEIFSSVPRSNIS
Sbjct: 311 GSIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTFLGIL 370
Query: 364 ------------------------------------------------------------ 423
Sbjct: 371 TACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMPIEAD 430
Query: 424 ------------------------------------------------------------ 456
Sbjct: 431 VVTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRERMKS 490
BLAST of Cp4.1LG18g09360 vs. ExPASy TrEMBL
Match:
A0A6J1JL20 (pentatricopeptide repeat-containing protein At5g50990 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485562 PE=3 SV=1)
HSP 1 Score: 816 bits (2108), Expect = 9.39e-292
Identity = 441/620 (71.13%), Postives = 446/620 (71.94%), Query Frame = 0
Query: 3 SLYRCRRGKLKMLQKQRYLDRQRITSALLATSAYALPGPLRIPKVPLSSLLPFTSSPIHV 62
SLY R GKLKM QKQRYLDRQRITSALLATSAYALPGPLRIP+VPLSSL PFTSSPIHV
Sbjct: 10 SLYWRRTGKLKMFQKQRYLDRQRITSALLATSAYALPGPLRIPRVPLSSL-PFTSSPIHV 69
Query: 63 HYTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVKAGYQTLY 122
HYTSCASLPNPL LLNFMSIRCICFLPPSPPSSIPWNSNELE ANSTSKFTV+AGYQTLY
Sbjct: 70 HYTSCASLPNPLALLNFMSIRCICFLPPSPPSSIPWNSNELEHANSTSKFTVEAGYQTLY 129
Query: 123 RVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCS 182
RVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCS
Sbjct: 130 RVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCS 189
Query: 183 KHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFR 242
KHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFR
Sbjct: 190 KHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFR 249
Query: 243 QMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCG 302
QML SNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKI+LNSILSCALIDAYSKCG
Sbjct: 250 QMLVSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIDLNSILSCALIDAYSKCG 309
Query: 303 SIQIAKEIFSSVPRSNIS------------------------------------------ 362
SIQIAKEIFSSVPRSNIS
Sbjct: 310 SIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTFLGILT 369
Query: 363 ------------------------------------------------------------ 422
Sbjct: 370 ACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMPIEADV 429
Query: 423 ------------------------------------------------------------ 456
Sbjct: 430 VTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRERMKSN 489
BLAST of Cp4.1LG18g09360 vs. ExPASy TrEMBL
Match:
A0A6J1JLQ2 (pentatricopeptide repeat-containing protein At5g50990 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485562 PE=3 SV=1)
HSP 1 Score: 811 bits (2095), Expect = 9.55e-290
Identity = 441/622 (70.90%), Postives = 446/622 (71.70%), Query Frame = 0
Query: 3 SLYRCRRGKLKMLQKQRYLDRQRITSALLATSAYALPGPLRIPKVPLSSLLPFTSSPIHV 62
SLY R GKLKM QKQRYLDRQRITSALLATSAYALPGPLRIP+VPLSSL PFTSSPIHV
Sbjct: 10 SLYWRRTGKLKMFQKQRYLDRQRITSALLATSAYALPGPLRIPRVPLSSL-PFTSSPIHV 69
Query: 63 HYTSCASLPNPLPLLNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVKAG--YQT 122
HYTSCASLPNPL LLNFMSIRCICFLPPSPPSSIPWNSNELE ANSTSKFTV+AG YQT
Sbjct: 70 HYTSCASLPNPLALLNFMSIRCICFLPPSPPSSIPWNSNELEHANSTSKFTVEAGNGYQT 129
Query: 123 LYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLL 182
LYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLL
Sbjct: 130 LYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLL 189
Query: 183 CSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKF 242
CSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKF
Sbjct: 190 CSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKF 249
Query: 243 FRQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSK 302
FRQML SNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKI+LNSILSCALIDAYSK
Sbjct: 250 FRQMLVSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIDLNSILSCALIDAYSK 309
Query: 303 CGSIQIAKEIFSSVPRSNIS---------------------------------------- 362
CGSIQIAKEIFSSVPRSNIS
Sbjct: 310 CGSIQIAKEIFSSVPRSNISVWNAMIKGLAIHGLSMDALSVFWMMERENVLPDAVTFLGI 369
Query: 363 ------------------------------------------------------------ 422
Sbjct: 370 LTACNHGGLIEQGRRFFDWMKNRYSIQPQLEHYGVMVDLYSRAGFLEEAYSIIVAMPIEA 429
Query: 423 ------------------------------------------------------------ 456
Sbjct: 430 DVVTWRALLSGCRIYRNQELAEVAIANMSHRGSGDYVLLSNIYCSLNRWEHAERVRERMK 489
BLAST of Cp4.1LG18g09360 vs. ExPASy TrEMBL
Match:
A0A1S4DV22 (pentatricopeptide repeat-containing protein At5g50990 OS=Cucumis melo OX=3656 GN=LOC103487281 PE=3 SV=1)
HSP 1 Score: 526 bits (1354), Expect = 8.78e-179
Identity = 309/606 (50.99%), Postives = 335/606 (55.28%), Query Frame = 0
Query: 17 KQRYLDRQRITSALLATSAYALPGPLRIPKVPLSSLLPFTSSPIHVHYTSCASLPNPLPL 76
KQRYLD +RIT ALLATSA ALP
Sbjct: 3 KQRYLDCRRITCALLATSASALPA------------------------------------ 62
Query: 77 LNFMSIRCICFLPPSPPSSIPWNSNELEDANSTSKFTVKAGYQTLYRVLEACRLSPSNSK 136
+ S FT YQTL+RVLEACRL P NSK
Sbjct: 63 -------------------------------APSNFT---DYQTLHRVLEACRLFPMNSK 122
Query: 137 TASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCSKHLDLVAMNLFIDN 196
T ETHAR+IKFGYGNYPTL+ SLVS YQ CLNRVH+LL++LCSKHLDLVAMNL I N
Sbjct: 123 TVIETHARIIKFGYGNYPTLIASLVSTYQYVGCLNRVHRLLDILCSKHLDLVAMNLLIGN 182
Query: 197 FMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQMLNSNIQPDGFTF 256
FMKIGECK AK+VF KMP+RDVVTWNSIIGGCVKNARY+EAF+FFRQML SNIQPDGFTF
Sbjct: 183 FMKIGECKFAKKVFYKMPFRDVVTWNSIIGGCVKNARYDEAFRFFRQMLTSNIQPDGFTF 242
Query: 257 ASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCGSIQIAKEIFSSVPR 316
AS+LNACAQLGAPSNT WV A MTQKKIELNS+LSCALIDAYSKCGSIQIAKEIFS+VP
Sbjct: 243 ASLLNACAQLGAPSNTHWVRAQMTQKKIELNSLLSCALIDAYSKCGSIQIAKEIFSNVPH 302
Query: 317 S----------------------------------------------------------- 376
S
Sbjct: 303 SDTSVWNVMIKGLAIHGLAMDALSLFLRMEHENVLPDAITFLGILTACNHGGLIDHGRRY 362
Query: 377 ------------------------------------------------------------ 436
Sbjct: 363 FELMRSRYSIQPQLEHYGVMVDLYSRAGFLEEAYSLIVTMPIEPDVVTWRTLLSGCKIYK 422
Query: 437 ----------NISSC-------------------------------------GKSWIELG 456
N+S C GKSWIELG
Sbjct: 423 NHKLAEVAIANMSHCKSGDYVLLSNIYCSLNRWEEAETVRKMMKINRVRKKRGKSWIELG 482
BLAST of Cp4.1LG18g09360 vs. TAIR 10
Match:
AT5G50990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 302.8 bits (774), Expect = 6.3e-82
Identity = 184/516 (35.66%), Postives = 255/516 (49.42%), Query Frame = 0
Query: 108 STSKFTVKAGYQTLYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRA 167
S+S + + L +VLE+C+ +PSNSK + HA++ K GYG YP+L+ S V+AY+R
Sbjct: 20 SSSSASNLTDHGMLKQVLESCK-APSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRC 79
Query: 168 DCLNRVHQLLNLLCSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGG 227
+ +LL S + +NL I++ MKIGE LAK+V ++V+TWN +IGG
Sbjct: 80 NRSYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGG 139
Query: 228 CVKNARYEEAFKFFRQMLN-SNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIEL 287
V+N +YEEA K + ML+ ++I+P+ F+FAS L ACA+LG + +WVH+LM IEL
Sbjct: 140 YVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIEL 199
Query: 288 NSILSCALIDAYSKCGSIQIAKEIFSSVPRSNIS-------------------------- 347
N+ILS AL+D Y+KCG I ++E+F SV R+++S
Sbjct: 200 NAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEME 259
Query: 348 ----------------SC------------------------------------------ 407
+C
Sbjct: 260 AEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRV 319
Query: 408 ------------------------------------------------------------ 457
Sbjct: 320 KEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSST 379
BLAST of Cp4.1LG18g09360 vs. TAIR 10
Match:
AT4G37170.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 192.6 bits (488), Expect = 9.2e-49
Identity = 109/336 (32.44%), Postives = 157/336 (46.73%), Query Frame = 0
Query: 189 AMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQMLNSN 248
A + +D + K G + AK V D P D+V+W S+IGGC +N + +EA K+F +L S
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSG 415
Query: 249 IQPDGFTFASVLNACAQLG-APSNTQWVHALMTQKKIELNSILSCALIDAYSKCGSIQIA 308
+PD TF +VL+AC G ++ +++ + ++ S L+D ++ G +
Sbjct: 416 TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQL 475
Query: 309 KEIFSSVP--------RSNISSC------------------------------------- 368
K + S +P S + C
Sbjct: 476 KSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAA 535
Query: 369 ----------------------GKSWIELGGSIQSFKSGDRSHPESDAVYKVVWRLMKRS 428
G SW E+ F + D SHP + + + + L K+
Sbjct: 536 GKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKM 595
Query: 429 RSEGYMPVTDLVLMDISEEEKEENLSYHSEKLALAYAILKTSPGAKISISKNLRMCDDCH 457
+ EGY+P T LVL D+ +E+KEENL YHSEKLA+A+AIL T G I + KNLR C DCH
Sbjct: 596 KEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCH 655
BLAST of Cp4.1LG18g09360 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 191.0 bits (484), Expect = 2.7e-48
Identity = 132/508 (25.98%), Postives = 209/508 (41.14%), Query Frame = 0
Query: 120 TLYRVLEACRLSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNL 179
T +L+AC + S + ++ HA++ K GY N V SL+++Y H L +
Sbjct: 117 TFPSLLKACS-NLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDR 176
Query: 180 LCSKHLDLVAMNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFK 239
+ D V+ N I ++K G+ +A +F KM ++ ++W ++I G V+ +EA +
Sbjct: 177 I--PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQ 236
Query: 240 FFRQMLNSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYS 299
F +M NS+++PD + A+ L+ACAQLGA +W+H+ + + +I ++S+L C LID Y+
Sbjct: 237 LFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYA 296
Query: 300 KCGSIQIAKEIFSS---------------------------------------------- 359
KCG ++ A E+F +
Sbjct: 297 KCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTA 356
Query: 360 ------------------------------------------------------------ 419
Sbjct: 357 VLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLK 416
Query: 420 ----------------------------------------VPRSNISSCGKSW------- 457
V ++NI + K W
Sbjct: 417 PNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETR 476
BLAST of Cp4.1LG18g09360 vs. TAIR 10
Match:
AT3G62890.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 190.7 bits (483), Expect = 3.5e-48
Identity = 133/502 (26.49%), Postives = 209/502 (41.63%), Query Frame = 0
Query: 131 SPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCSKHLDLVAM 190
+P + THA+++ FG P + TSL++ Y L ++ + SK DL A
Sbjct: 74 NPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK--DLPAW 133
Query: 191 NLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQML----- 250
N ++ + K G A+++FD+MP R+V++W+ +I G V +Y+EA FR+M
Sbjct: 134 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 193
Query: 251 NSNIQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCGSIQ 310
+ ++P+ FT ++VL+AC +LGA +WVHA + + +E++ +L ALID Y+KCGS++
Sbjct: 194 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 253
Query: 311 IAKEIFSSV---------------------------------------PRS--------- 370
AK +F+++ P S
Sbjct: 254 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 313
Query: 371 ------------------------------------------------------------ 430
Sbjct: 314 CVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL 373
Query: 431 -------------NISSC------------------------------------------ 457
+I +C
Sbjct: 374 IWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEME 433
BLAST of Cp4.1LG18g09360 vs. TAIR 10
Match:
AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 182.6 bits (462), Expect = 9.5e-46
Identity = 124/498 (24.90%), Postives = 194/498 (38.96%), Query Frame = 0
Query: 130 LSPSNSKTASETHARMIKFGYGNYPTLVTSLVSAYQRADCLNRVHQLLNLLCSKHLDLVA 189
L ++K+ H ++KFG G P + T LV Y + + ++ + + + LV+
Sbjct: 137 LKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPER--SLVS 196
Query: 190 MNLFIDNFMKIGECKLAKRVFDKMPYRDVVTWNSIIGGCVKNARYEEAFKFFRQML-NSN 249
I + K G + A+ +FD M RD+V+WN +I G ++ +A F+++L
Sbjct: 197 STAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGK 256
Query: 250 IQPDGFTFASVLNACAQLGAPSNTQWVHALMTQKKIELNSILSCALIDAYSKCGSIQIAK 309
+PD T + L+AC+Q+GA +W+H + +I LN + LID YSKCGS++ A
Sbjct: 257 PKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAV 316
Query: 310 EIFSSVPRSNI------------------------------------------------- 369
+F+ PR +I
Sbjct: 317 LVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHA 376
Query: 370 ------------------------------------------------------------ 429
Sbjct: 377 GLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSS 436
Query: 430 --SSC------------------------------------------------------- 457
SC
Sbjct: 437 VLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGI 496
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FI49 | 8.9e-81 | 35.66 | Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana OX... | [more] |
O23169 | 1.3e-47 | 32.44 | Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana OX... | [more] |
Q9FJY7 | 3.8e-47 | 25.98 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Q683I9 | 4.9e-47 | 26.49 | Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX... | [more] |
Q9SZT8 | 1.3e-44 | 24.90 | Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t... | [more] |
Match Name | E-value | Identity | Description | |
XP_023516965.1 | 2.41e-304 | 73.23 | pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cucurbita pepo... | [more] |
XP_023516963.1 | 2.46e-302 | 72.99 | pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cucurbita pepo... | [more] |
XP_022922013.1 | 3.56e-299 | 72.21 | pentatricopeptide repeat-containing protein At5g50990 isoform X2 [Cucurbita mosc... | [more] |
KAG7023021.1 | 2.90e-298 | 72.05 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022922012.1 | 3.62e-297 | 71.98 | pentatricopeptide repeat-containing protein At5g50990 isoform X1 [Cucurbita mosc... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E5D9 | 1.72e-299 | 72.21 | pentatricopeptide repeat-containing protein At5g50990 isoform X2 OS=Cucurbita mo... | [more] |
A0A6J1E1Y0 | 1.75e-297 | 71.98 | pentatricopeptide repeat-containing protein At5g50990 isoform X1 OS=Cucurbita mo... | [more] |
A0A6J1JL20 | 9.39e-292 | 71.13 | pentatricopeptide repeat-containing protein At5g50990 isoform X2 OS=Cucurbita ma... | [more] |
A0A6J1JLQ2 | 9.55e-290 | 70.90 | pentatricopeptide repeat-containing protein At5g50990 isoform X1 OS=Cucurbita ma... | [more] |
A0A1S4DV22 | 8.78e-179 | 50.99 | pentatricopeptide repeat-containing protein At5g50990 OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
AT5G50990.1 | 6.3e-82 | 35.66 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G37170.1 | 9.2e-49 | 32.44 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G66520.1 | 2.7e-48 | 25.98 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G62890.1 | 3.5e-48 | 26.49 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G37380.1 | 9.5e-46 | 24.90 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |