Cp4.1LG18g09260 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g09260
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CASP-like protein
Location	Cp4.1LG18: 8214769 .. 8215923 (+)
RNA-Seq Expression	Cp4.1LG18g09260
Synteny	Cp4.1LG18g09260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACCATTCATCTCATTAACATTTCATTCCTTCTTCTTCTTCTTCCTCCTCCCATAATAATCTAATATGGCCGATAATAATAATGTGGAATTGGAAGCCAAGTCCCAGGGCCCCCATGCCAACCTCTACCTCTCTTCCCAGATTATCCTCAGAGCTTTGGTAATTTCCTCCACATTGGCCGCCACCTGGACCCTCACCACCGCCAAGCAATCCGTCGTCATCTTCGGCTTCACTTTGGACGCCCGATACAGCTACTCCTCTGCTTTCAAGTAACTCCCTGATCCCTACTCTTTTTTGTTTTCCATATATTTGATCCAAAATTAATTTTATGGCGCAGATTCTTTGCCTTAGCCAACGCTATTGCCTGTGGCTTCTGTCTTCTGTCCCTGTGCTTTGTTTTCATATCATCTCGGCAGTTGGCGTTGGGGAACCGTCAAAGAAACTTCTCCTTCTTCTTCTTCTTCTTTGTTCACGATTTGTTGATGATGGGATTGGTGGTGAGTGGATGCGCTGCTGCCACCGCCATCGGGTTCGTGGGGAGGTACGGGAACACCCACACAGGCTGGTCGCCCATCTGTGACCAATTCGCCAAGTTTTGCAATCGCATCACCATTTCCATCGCCATCTCTTATTTTGCCGTGCTTTGCCTCCTCATACTCACCATCATCTCTGCATATCCAACCAAACTCCACCGCTAATTTGGCCCATTTTGTTGATGTGTGAACGCGAGGTTTGGTTAATGGGTTTAGTGATGATGTGTGCATTTTCCATCTTCTTTGTCCTTACCTTCTGTGTTGCAACCGCATTGTTAGAATTGGTCAATCCATTAGAATAGCTTGAAGTTAGTCATGCCATAAGAATAGGCTTACTTCGTTAGTTTCCTATGAAATCGGATCTATTAGTTAATCTTTTGCCAATATAAATAGAATATGTCCTCAATAGTGTGAGGTACAGTTTTGCATAAACTTGATATGGTATCAGAGCAGAAATAAGATCCACGAGATCCATAGCCTCTGCTGTTAGACATGTCAATCCCAAACAACACAATGTCTTCTCCGTCGATCAGTCAGGTGATTAGTGTTAAGCTTACACAAGAAAATTATCTACTGTGGTCTACCCAAATCCTTCCCTACTTGCGTAGCCAAAACCTTGTTGG

mRNA sequence

CACCATTCATCTCATTAACATTTCATTCCTTCTTCTTCTTCTTCCTCCTCCCATAATAATCTAATATGGCCGATAATAATAATGTGGAATTGGAAGCCAAGTCCCAGGGCCCCCATGCCAACCTCTACCTCTCTTCCCAGATTATCCTCAGAGCTTTGGTAATTTCCTCCACATTGGCCGCCACCTGGACCCTCACCACCGCCAAGCAATCCGTCGTCATCTTCGGCTTCACTTTGGACGCCCGATACAGCTACTCCTCTGCTTTCAAATTCTTTGCCTTAGCCAACGCTATTGCCTGTGGCTTCTGTCTTCTGTCCCTGTGCTTTGTTTTCATATCATCTCGGCAGTTGGCGTTGGGGAACCGTCAAAGAAACTTCTCCTTCTTCTTCTTCTTCTTTGTTCACGATTTGTTGATGATGGGATTGGTGGTGAGTGGATGCGCTGCTGCCACCGCCATCGGGTTCGTGGGGAGGTACGGGAACACCCACACAGGCTGGTCGCCCATCTGTGACCAATTCGCCAAGTTTTGCAATCGCATCACCATTTCCATCGCCATCTCTTATTTTGCCGTGCTTTGCCTCCTCATACTCACCATCATCTCTGCATATCCAACCAAACTCCACCGCTAATTTGGCCCATTTTGTTGATGTGTGAACGCGAGGTTTGGTTAATGGGTTTAGTGATGATGTGTGCATTTTCCATCTTCTTTGTCCTTACCTTCTGTGTTGCAACCGCATTGTTAGAATTGGTCAATCCATTAGAATAGCTTGAAGTTAGTCATGCCATAAGAATAGGCTTACTTCGTTAGTTTCCTATGAAATCGGATCTATTAGTTAATCTTTTGCCAATATAAATAGAATATGTCCTCAATAGTGTGAGGTACAGTTTTGCATAAACTTGATATGGTATCAGAGCAGAAATAAGATCCACGAGATCCATAGCCTCTGCTGTTAGACATGTCAATCCCAAACAACACAATGTCTTCTCCGTCGATCAGTCAGGTGATTAGTGTTAAGCTTACACAAGAAAATTATCTACTGTGGTCTACCCAAATCCTTCCCTACTTGCGTAGCCAAAACCTTGTTGG

Coding sequence (CDS)

ATGGCCGATAATAATAATGTGGAATTGGAAGCCAAGTCCCAGGGCCCCCATGCCAACCTCTACCTCTCTTCCCAGATTATCCTCAGAGCTTTGGTAATTTCCTCCACATTGGCCGCCACCTGGACCCTCACCACCGCCAAGCAATCCGTCGTCATCTTCGGCTTCACTTTGGACGCCCGATACAGCTACTCCTCTGCTTTCAAATTCTTTGCCTTAGCCAACGCTATTGCCTGTGGCTTCTGTCTTCTGTCCCTGTGCTTTGTTTTCATATCATCTCGGCAGTTGGCGTTGGGGAACCGTCAAAGAAACTTCTCCTTCTTCTTCTTCTTCTTTGTTCACGATTTGTTGATGATGGGATTGGTGGTGAGTGGATGCGCTGCTGCCACCGCCATCGGGTTCGTGGGGAGGTACGGGAACACCCACACAGGCTGGTCGCCCATCTGTGACCAATTCGCCAAGTTTTGCAATCGCATCACCATTTCCATCGCCATCTCTTATTTTGCCGTGCTTTGCCTCCTCATACTCACCATCATCTCTGCATATCCAACCAAACTCCACCGCTAA

Protein sequence

MADNNNVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDARYSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGLVVSGCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISAYPTKLHR

Homology

[Close]

BLAST of Cp4.1LG18g09260 vs. ExPASy Swiss-Prot
Match: B9RA90 (CASP-like protein 1F1 OS=Ricinus communis OX=3988 GN=RCOM_1504680 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.2e-41
Identity = 93/175 (53.14%), Postives = 121/175 (69.14%), Query Frame = 0


Query: 6   NVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDARYSYSS 65
           NVE +  S      L++ +QI LR + I +TLAATW + T KQS+    F + A+Y+YSS
Sbjct: 3   NVEDKYNSPLKSQKLFIGAQICLRIVTIGATLAATWIMVTDKQSITFGDFVMVAKYNYSS 62

Query: 66  AFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGLVVSGC 125
           AFKFF LAN IAC   ++SL F+       ALG    N    F  F+HDLLMM LV++GC
Sbjct: 63  AFKFFVLANVIACACSVVSLLFL------CALGRYSSNPGHVFLLFLHDLLMMSLVLAGC 122

Query: 126 AAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISA 181
           +AATAIGF+G+YGNT +GW PICDQF +FCNR TIS+ +SY +++CLLILT+ SA
Sbjct: 123 SAATAIGFLGKYGNTKSGWMPICDQFGQFCNRGTISMMLSYLSMVCLLILTVTSA 171

[Close]

BLAST of Cp4.1LG18g09260 vs. ExPASy Swiss-Prot
Match: A7PHN8 (CASP-like protein 1F1 OS=Vitis vinifera OX=29760 GN=VIT_17s0000g00560 PE=2 SV=2)

HSP 1 Score: 161.4 bits (407), Expect = 1.0e-38
Identity = 92/177 (51.98%), Postives = 122/177 (68.93%), Query Frame = 0


Query: 9   LEAKSQ-----GPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDARYSY 68
           +EAK Q     G H  L+L + I LR L +++TL A W + T+KQ+V ++G  ++A+YSY
Sbjct: 29  IEAKFQQNPPLGTH-KLFLGAHICLRILTVTATLTAAWMMITSKQTVEVYGIQVEAKYSY 88

Query: 69  SSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGLVVS 128
           SSAFKFF+ ANAIACG  +L+L   F      +L  R      FFF F+HDL MM LV++
Sbjct: 89  SSAFKFFSYANAIACGCSVLTLFPAF------SLFYRGSTPMKFFFLFLHDLCMMSLVLA 148

Query: 129 GCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISA 181
           GCAAATAIG+VGRYGN H GW  ICDQF ++CNRI +S+  SY A + +L+LTI+SA
Sbjct: 149 GCAAATAIGYVGRYGNNHAGWMAICDQFDEYCNRIRLSLMFSYLAFVFILMLTIMSA 198

[Close]

BLAST of Cp4.1LG18g09260 vs. ExPASy Swiss-Prot
Match: B9I3X5 (CASP-like protein 1F2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_823430 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.9e-38
Identity = 82/162 (50.62%), Postives = 113/162 (69.75%), Query Frame = 0


Query: 19  NLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDARYSYSSAFKFFALANAIAC 78
           N+++ +QI LR +VI+++ A+TW + T KQ++ I GF LDA YSYS  FKF + AN +  
Sbjct: 18  NIFIGAQIFLRIVVIAASFASTWLMLTNKQTIDIGGFVLDANYSYSPEFKFLSYANIVVG 77

Query: 79  GFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGLVVSGCAAATAIGFVGRYG 138
            F  +SL F+ +      +G R  N +++F  F+HDL +M LV+ GCAAAT IG +G+YG
Sbjct: 78  AFSFVSLLFLVL------VGRRSSNPTYYFILFLHDLALMSLVLGGCAAATVIGSLGKYG 137

Query: 139 NTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISA 181
           N+HTGW  ICD F KFC R T S+A SYF+++CLLILTI SA
Sbjct: 138 NSHTGWMQICDHFGKFCKRATTSVAFSYFSLVCLLILTITSA 173

[Close]

BLAST of Cp4.1LG18g09260 vs. ExPASy Swiss-Prot
Match: B9IFI5 (CASP-like protein 1F1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_824792 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.4e-35
Identity = 83/177 (46.89%), Postives = 110/177 (62.15%), Query Frame = 0


Query: 4   NNNVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDARYSY 63
           NN  +           L++  QI  R + I++++A++W + T+KQ + I G  LDARYSY
Sbjct: 3   NNEAKFSVNQPLKTQKLFIGVQIFFRIVAIAASVASSWLMITSKQVIDIGGIVLDARYSY 62

Query: 64  SSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGLVVS 123
           S  FKF A  N +   F LLSL F+ +  RQ        N + +FF F+HDL MM LVV 
Sbjct: 63  SPEFKFLAFTNIVVGCFSLLSLLFLVLVVRQ------GSNPNHYFFLFLHDLAMMSLVVG 122

Query: 124 GCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISA 181
           GCAAAT +GF+G++GN+HTGW  ICD F KFCNR   S+ ISY  ++CL ILTI SA
Sbjct: 123 GCAAATTVGFLGKHGNSHTGWMQICDNFGKFCNRAQTSVTISYLNLICLSILTITSA 173

[Close]

BLAST of Cp4.1LG18g09260 vs. ExPASy Swiss-Prot
Match: B9RH17 (CASP-like protein 1F2 OS=Ricinus communis OX=3988 GN=RCOM_1446020 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.7e-31
Identity = 70/162 (43.21%), Postives = 110/162 (67.90%), Query Frame = 0


Query: 20  LYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDARYSYSSAFKFFALANAIACG 79
           ++  +Q+I R L I+  +A+   + T+ Q+V++FG    ARYSYSSAF+F   ANA+ CG
Sbjct: 30  IFFMAQVIFRILAIAFAVASISAMVTSDQNVIVFGMDTAARYSYSSAFRFLVGANAVVCG 89

Query: 80  FCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGLVVSGCAAATAIGFVGRYGN 139
           F +LSL FV + SR+ +    ++N    ++ F+HD++MM ++VSGC+AATAIG+VGRYG 
Sbjct: 90  FSVLSLIFVCLMSRR-SEAILEKN----YYLFLHDMVMMVMMVSGCSAATAIGYVGRYGE 149

Query: 140 THTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISAY 182
               W+ +CD   KFCN+  +SI ++Y A+ C + LT ++A+
Sbjct: 150 KEITWTAVCDFVGKFCNQALVSIVLAYLALFCYVALTTLAAH 186

[Close]

BLAST of Cp4.1LG18g09260 vs. NCBI nr
Match: XP_023516133.1 (CASP-like protein 1F1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 363 bits (931), Expect = 2.96e-126
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MADNNNVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDAR 60
           MADNNNVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDAR
Sbjct: 1   MADNNNVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDAR 60

Query: 61  YSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGL 120
           YSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGL
Sbjct: 61  YSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGL 120

Query: 121 VVSGCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISA 180
           VVSGCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISA
Sbjct: 121 VVSGCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISA 180

Query: 181 YPTKLHR 187
           YPTKLHR
Sbjct: 181 YPTKLHR 187

[Close]

BLAST of Cp4.1LG18g09260 vs. NCBI nr
Match: XP_022921629.1 (CASP-like protein 1F1 [Cucurbita moschata])

HSP 1 Score: 327 bits (839), Expect = 2.64e-112
Identity = 173/187 (92.51%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 1   MADNNNVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDAR 60
           MADNN VELEAKSQGPHANLYLSSQIILRALVISSTLAA WTL TAKQSVVIFGFTLDAR
Sbjct: 1   MADNN-VELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDAR 60

Query: 61  YSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGL 120
           YSYSSAFKFFA+ANAIACGFCLLS+CFVFIS+RQLALGNRQRNF    FFFVHDLLMMGL
Sbjct: 61  YSYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNF----FFFVHDLLMMGL 120

Query: 121 VVSGCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISA 180
           V+SGCAAATAIGFVGRYGNTHTGWSPICDQF KFCNRI ISIAISYFAVLCLLILTIISA
Sbjct: 121 VLSGCAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISA 180

Query: 181 YPTKLHR 187
            PTKLHR
Sbjct: 181 NPTKLHR 182

[Close]

BLAST of Cp4.1LG18g09260 vs. NCBI nr
Match: XP_022987446.1 (CASP-like protein 1F1 [Cucurbita maxima])

HSP 1 Score: 316 bits (810), Expect = 6.94e-108
Identity = 166/183 (90.71%), Postives = 172/183 (93.99%), Query Frame = 0


Query: 5   NNVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDARYSYS 64
           NNVELEAKSQG HA LYLSSQIILRA VISSTLAATWTL TAKQSVVIFGFTLDARYSYS
Sbjct: 4   NNVELEAKSQGLHAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYS 63

Query: 65  SAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGLVVSG 124
           SAFKFFA+ANA+ACGFCLLS+CFVFIS+RQLALG+RQRNF    FFFVHDLLMMGLV+SG
Sbjct: 64  SAFKFFAIANAVACGFCLLSVCFVFISTRQLALGSRQRNF----FFFVHDLLMMGLVLSG 123

Query: 125 CAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISAYPTK 184
           CAAATAIGFVGRYGNTHTGWSPICDQF KFCNRITISIAISYFAVLCLLILTIISA PTK
Sbjct: 124 CAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTK 182

Query: 185 LHR 187
           L R
Sbjct: 184 LQR 182

[Close]

BLAST of Cp4.1LG18g09260 vs. NCBI nr
Match: KAG6589353.1 (CASP-like protein 1F1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 227 bits (578), Expect = 2.66e-72
Identity = 128/162 (79.01%), Postives = 136/162 (83.95%), Query Frame = 0


Query: 1   MADNNNVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDAR 60
           MADNN VELEAKSQGPHANLYLSSQIILRALVISSTLAA WTL TAKQSVVIFGFTLDAR
Sbjct: 1   MADNN-VELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDAR 60

Query: 61  YSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGL 120
           YSYSSAFKFFA+ANAIACGFCLLS+CFVFIS+RQLALG+RQRNF FFF    HDLLMMGL
Sbjct: 61  YSYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGSRQRNFFFFF----HDLLMMGL 120

Query: 121 VVSGCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISI 162
           V+SGCAAATAIGFVG   +  T  SP        C+   IS+
Sbjct: 121 VLSGCAAATAIGFVGSEPHIATP-SPFAPHRHPHCHAHLISL 156

[Close]

BLAST of Cp4.1LG18g09260 vs. NCBI nr
Match: KAA0057743.1 (CASP-like protein 1F2 [Cucumis melo var. makuwa])

HSP 1 Score: 223 bits (569), Expect = 4.77e-71
Identity = 119/187 (63.64%), Postives = 144/187 (77.01%), Query Frame = 0


Query: 2   ADNNNVELEAKSQGPH-------ANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFG 61
           A+ N++ELE+KS   H        NL+L SQIILR LVISSTLAATW + TAKQSV++FG
Sbjct: 4   ANGNDMELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFG 63

Query: 62  FTLDARYSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHD 121
              DARY+YSSAF+FFA ANAIA  FC LSLCF+  SS + +  +   NF   FFF +HD
Sbjct: 64  IPFDARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPS-SSTPPNFYILFFFRLHD 123

Query: 122 LLMMGLVVSGCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLI 181
           LLMMGLV+SGC+AATAIG+VG+YGNTH GWSPIC+ F  FCNR+T SIAISY +V+CLLI
Sbjct: 124 LLMMGLVLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLI 183

[Close]

BLAST of Cp4.1LG18g09260 vs. ExPASy TrEMBL
Match: A0A6J1E119 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111429832 PE=3 SV=1)

HSP 1 Score: 327 bits (839), Expect = 1.28e-112
Identity = 173/187 (92.51%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 1   MADNNNVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDAR 60
           MADNN VELEAKSQGPHANLYLSSQIILRALVISSTLAA WTL TAKQSVVIFGFTLDAR
Sbjct: 1   MADNN-VELEAKSQGPHANLYLSSQIILRALVISSTLAAIWTLVTAKQSVVIFGFTLDAR 60

Query: 61  YSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGL 120
           YSYSSAFKFFA+ANAIACGFCLLS+CFVFIS+RQLALGNRQRNF    FFFVHDLLMMGL
Sbjct: 61  YSYSSAFKFFAIANAIACGFCLLSVCFVFISTRQLALGNRQRNF----FFFVHDLLMMGL 120

Query: 121 VVSGCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISA 180
           V+SGCAAATAIGFVGRYGNTHTGWSPICDQF KFCNRI ISIAISYFAVLCLLILTIISA
Sbjct: 121 VLSGCAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRIAISIAISYFAVLCLLILTIISA 180

Query: 181 YPTKLHR 187
            PTKLHR
Sbjct: 181 NPTKLHR 182

[Close]

BLAST of Cp4.1LG18g09260 vs. ExPASy TrEMBL
Match: A0A6J1JE80 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111484991 PE=3 SV=1)

HSP 1 Score: 316 bits (810), Expect = 3.36e-108
Identity = 166/183 (90.71%), Postives = 172/183 (93.99%), Query Frame = 0


Query: 5   NNVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDARYSYS 64
           NNVELEAKSQG HA LYLSSQIILRA VISSTLAATWTL TAKQSVVIFGFTLDARYSYS
Sbjct: 4   NNVELEAKSQGLHAKLYLSSQIILRASVISSTLAATWTLITAKQSVVIFGFTLDARYSYS 63

Query: 65  SAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGLVVSG 124
           SAFKFFA+ANA+ACGFCLLS+CFVFIS+RQLALG+RQRNF    FFFVHDLLMMGLV+SG
Sbjct: 64  SAFKFFAIANAVACGFCLLSVCFVFISTRQLALGSRQRNF----FFFVHDLLMMGLVLSG 123

Query: 125 CAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISAYPTK 184
           CAAATAIGFVGRYGNTHTGWSPICDQF KFCNRITISIAISYFAVLCLLILTIISA PTK
Sbjct: 124 CAAATAIGFVGRYGNTHTGWSPICDQFGKFCNRITISIAISYFAVLCLLILTIISANPTK 182

Query: 185 LHR 187
           L R
Sbjct: 184 LQR 182

[Close]

BLAST of Cp4.1LG18g09260 vs. ExPASy TrEMBL
Match: A0A5A7UPF9 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00240 PE=3 SV=1)

HSP 1 Score: 223 bits (569), Expect = 2.31e-71
Identity = 119/187 (63.64%), Postives = 144/187 (77.01%), Query Frame = 0


Query: 2   ADNNNVELEAKSQGPH-------ANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFG 61
           A+ N++ELE+KS   H        NL+L SQIILR LVISSTLAATW + TAKQSV++FG
Sbjct: 4   ANGNDMELESKSCSHHHDHQPIITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFG 63

Query: 62  FTLDARYSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHD 121
              DARY+YSSAF+FFA ANAIA  FC LSLCF+  SS + +  +   NF   FFF +HD
Sbjct: 64  IPFDARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPS-SSTPPNFYILFFFRLHD 123

Query: 122 LLMMGLVVSGCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLI 181
           LLMMGLV+SGC+AATAIG+VG+YGNTH GWSPIC+ F  FCNR+T SIAISY +V+CLLI
Sbjct: 124 LLMMGLVLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLI 183

[Close]

BLAST of Cp4.1LG18g09260 vs. ExPASy TrEMBL
Match: A0A5D3BHA2 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00240 PE=3 SV=1)

HSP 1 Score: 222 bits (566), Expect = 6.39e-71
Identity = 119/186 (63.98%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 2   ADNNNVELEAKS------QGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGF 61
           A+ N++ELE+KS      Q    NL+L SQIILR LVISSTLAATW + TAKQSV++FG 
Sbjct: 4   ANGNDMELESKSCSHRHDQPTITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGI 63

Query: 62  TLDARYSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDL 121
             DARY+YSSAF+FFA ANAIA  FC LSLCF+  SS + +  +   NF   FFF +HDL
Sbjct: 64  PFDARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPS-SSTPPNFYILFFFRLHDL 123

Query: 122 LMMGLVVSGCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLIL 181
           LMMGLV+SGC+AATAIG+VG+YGNTH GWSPIC+ F  FCNR+T SIAISY +V+CLLIL
Sbjct: 124 LMMGLVLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLIL 183

[Close]

BLAST of Cp4.1LG18g09260 vs. ExPASy TrEMBL
Match: A0A1S3CLB6 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103502282 PE=3 SV=1)

HSP 1 Score: 222 bits (566), Expect = 6.39e-71
Identity = 119/186 (63.98%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 2   ADNNNVELEAKS------QGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGF 61
           A+ N++ELE+KS      Q    NL+L SQIILR LVISSTLAATW + TAKQSV++FG 
Sbjct: 4   ANGNDMELESKSCSHRHDQPTITNLHLCSQIILRVLVISSTLAATWIILTAKQSVLVFGI 63

Query: 62  TLDARYSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDL 121
             DARY+YSSAF+FFA ANAIA  FC LSLCF+  SS + +  +   NF   FFF +HDL
Sbjct: 64  PFDARYNYSSAFEFFAFANAIASAFCFLSLCFLIFSSTRPS-SSTPPNFYILFFFRLHDL 123

Query: 122 LMMGLVVSGCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLIL 181
           LMMGLV+SGC+AATAIG+VG+YGNTH GWSPIC+ F  FCNR+T SIAISY +V+CLLIL
Sbjct: 124 LMMGLVLSGCSAATAIGYVGKYGNTHAGWSPICNHFPSFCNRVTASIAISYLSVICLLIL 183

[Close]

BLAST of Cp4.1LG18g09260 vs. TAIR 10
Match: AT4G25040.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-21
Identity = 59/161 (36.65%), Postives = 91/161 (56.52%), Query Frame = 0


Query: 20  LYLSSQIILRALVISSTLAATWTLTTAKQSVVIFGFTLDARYSYSSAFKFFALANAIACG 79
           L L  Q+ +R L I + +A+ W + T ++   ++G   +A+YSYSSAF++   A    C 
Sbjct: 13  LNLGVQVSMRVLTIGAAMASMWVMITNREVASVYGIAFEAKYSYSSAFRYLVYAQIAVCA 72

Query: 80  FCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGLVVSGCAAATAIGFVGRYGN 139
             L +L +         L  R+R   F  FFF  DLL     +S  +AA A G+VG+YGN
Sbjct: 73  ATLFTLVWA-------CLAVRRRGLVFALFFF--DLLTTLTAISAFSAAFAEGYVGKYGN 132

Query: 140 THTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISA 181
              GW PIC     +C+R+TIS+A+S+ + + L ILT+++A
Sbjct: 133 KQAGWLPICGYVHGYCSRVTISLAMSFASFILLFILTVLTA 164

[Close]

BLAST of Cp4.1LG18g09260 vs. TAIR 10
Match: AT4G15630.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 85.5 bits (210), Expect = 4.9e-17
Identity = 61/188 (32.45%), Postives = 93/188 (49.47%), Query Frame = 0


Query: 3   DNNNVELEAKSQGPHANLYLSSQIILRALVISSTLAATWTLTTAKQSVVI---------- 62
           D   +E   K  G    L    ++ +R L +  T+ A   L  AKQ+ V+          
Sbjct: 10  DGMEMEKGKKESGSRKGL----ELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPP 69

Query: 63  FGFTLDARYSYSSAFKFFALANAIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFV 122
              +  A+ SY SAF +   ANAIACG+  +S+  V IS         +R+ S      +
Sbjct: 70  LNVSTTAKASYLSAFVYNISANAIACGYTAISIVIVMIS-------KGKRSKSLLMAVLI 129

Query: 123 HDLLMMGLVVSGCAAATAIGFVGRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCL 181
            DL+M+ L+ S   AA AIG +GR+GN H  W  +C  F KFCN+  +S+AI+  A +  
Sbjct: 130 GDLMMVALLFSSTGAAGAIGLMGRHGNKHVMWKKVCGVFGKFCNQAAVSVAITLIASVVF 186

[Close]

BLAST of Cp4.1LG18g09260 vs. TAIR 10
Match: AT4G15620.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 78.6 bits (192), Expect = 6.1e-15
Identity = 53/166 (31.93%), Postives = 84/166 (50.60%), Query Frame = 0


Query: 25  QIILRALVISSTLAATWTLTTAKQSVVI----------FGFTLDARYSYSSAFKFFALAN 84
           ++ +R L +  T+AA   L  AKQ+ V+             T  A+ SY SAF +    N
Sbjct: 28  ELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNISVN 87

Query: 85  AIACGFCLLSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGLVVSGCAAATAIGFV 144
           AIACG+  +S+  + IS         +R+        + DL+M+ L+ SG  AA+AIG +
Sbjct: 88  AIACGYTAISIAILMIS-------RGRRSKKLLMVVLLGDLVMVALLFSGTGAASAIGLM 147

Query: 145 GRYGNTHTGWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISA 181
           G +GN H  W  +C  F KFC+R   S+ ++  A +  + L ++ A
Sbjct: 148 GLHGNKHVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVLDA 186

[Close]

BLAST of Cp4.1LG18g09260 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-13
Identity = 48/158 (30.38%), Postives = 82/158 (51.90%), Query Frame = 0


Query: 25  QIILRALVISSTLAATWTLTTAKQSVVIFG--FTLDARYSYSSAFKFFALANAIACGFCL 84
           + ILR +   +T+ +   + T  +++  F       A Y+   A  FF +ANA+  G+ +
Sbjct: 29  EFILRIVAFFNTIGSAILMGTTHETLPFFTQFIRFQAEYNDLPALTFFVVANAVVSGYLI 88

Query: 85  LSLCFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGLVVSGCAAATAIGFVGRYGNTHT 144
           LSL   F+   +    N +          + D+ M+GL+ SG ++A AI ++   GN  T
Sbjct: 89  LSLTLAFVHIVKRKTQNTR------ILLIILDVAMLGLLTSGASSAAAIVYLAHNGNNKT 148

Query: 145 GWSPICDQFAKFCNRITISIAISYFAVLCLLILTIISA 181
            W  IC QF  FC RI+ S+  S+ A++ L++L ++SA
Sbjct: 149 NWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSA 180

[Close]

BLAST of Cp4.1LG18g09260 vs. TAIR 10
Match: AT4G03540.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12
Identity = 48/156 (30.77%), Postives = 83/156 (53.21%), Query Frame = 0


Query: 26  IILRALVISSTLAATWTLTTAKQSVVIFGFTLDARYSYSSAFKFFALANAIACGFCLLSL 85
           ++LR     + LAA   + T+++       +L+A+Y+  +AFK+F +ANA+   +  L L
Sbjct: 11  LVLRLAAFGAALAALIVMITSRERASFLAISLEAKYTDMAAFKYFVIANAVVSVYSFLVL 70

Query: 86  CFVFISSRQLALGNRQRNFSFFFFFFVHDLLMMGLVVSGCAAATAIGFVGRYGNTHTGWS 145
              F+    L           + F  V DL+M  L+ S  +AA A+  VG+ GN + GW 
Sbjct: 71  ---FLPKESL----------LWKFVVVLDLVMTMLLTSSLSAALAVAQVGKKGNANAGWL 130

Query: 146 PICDQFAKFCNRITISIAISYFAVLCLLILTIISAY 182
           PIC Q  KFC++IT ++   + A++  ++L + S +
Sbjct: 131 PICGQVPKFCDQITGALIAGFVALVLYVLLLLYSLH 153

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g09260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9RA90	2.2e-41	53.14	CASP-like protein 1F1 OS=Ricinus communis OX=3988 GN=RCOM_1504680 PE=2 SV=1	[more]
A7PHN8	1.0e-38	51.98	CASP-like protein 1F1 OS=Vitis vinifera OX=29760 GN=VIT_17s0000g00560 PE=2 SV=2	[more]
B9I3X5	2.9e-38	50.62	CASP-like protein 1F2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_823430 PE=3 S...	[more]
B9IFI5	1.4e-35	46.89	CASP-like protein 1F1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_824792 PE=2 S...	[more]
B9RH17	7.7e-31	43.21	CASP-like protein 1F2 OS=Ricinus communis OX=3988 GN=RCOM_1446020 PE=2 SV=1	[more]

BLAST of Cp4.1LG18g09260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516133.1	2.96e-126	100.00	CASP-like protein 1F1 [Cucurbita pepo subsp. pepo]	[more]
XP_022921629.1	2.64e-112	92.51	CASP-like protein 1F1 [Cucurbita moschata]	[more]
XP_022987446.1	6.94e-108	90.71	CASP-like protein 1F1 [Cucurbita maxima]	[more]
KAG6589353.1	2.66e-72	79.01	CASP-like protein 1F1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAA0057743.1	4.77e-71	63.64	CASP-like protein 1F2 [Cucumis melo var. makuwa]	[more]

BLAST of Cp4.1LG18g09260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E119	1.28e-112	92.51	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111429832 PE=3 SV=1	[more]
A0A6J1JE80	3.36e-108	90.71	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111484991 PE=3 SV=1	[more]
A0A5A7UPF9	2.31e-71	63.64	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00...	[more]
A0A5D3BHA2	6.39e-71	63.98	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00...	[more]
A0A1S3CLB6	6.39e-71	63.98	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103502282 PE=3 SV=1	[more]

BLAST of Cp4.1LG18g09260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25040.1	1.9e-21	36.65	Uncharacterised protein family (UPF0497)	[more]
AT4G15630.1	4.9e-17	32.45	Uncharacterised protein family (UPF0497)	[more]
AT4G15620.1	6.1e-15	31.93	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	3.3e-13	30.38	Uncharacterised protein family (UPF0497)	[more]
AT4G03540.1	1.3e-12	30.77	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 26..181 e-value: 2.6E-42 score: 142.2
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 24..171 e-value: 2.9E-35 score: 121.2
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 17..181
None	No IPR available	PANTHER	PTHR11615:SF264	CASP-LIKE PROTEIN 1F1	coord: 17..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g09260.1	Cp4.1LG18g09260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0003676	nucleic acid binding