Cp4.1LG18g08170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g08170
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-type domain-containing protein
Location	Cp4.1LG18: 7630570 .. 7633926 (+)
RNA-Seq Expression	Cp4.1LG18g08170
Synteny	Cp4.1LG18g08170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCTTATTCTGTGGAAAAGAGCGGACGAAGCAGAGGAGTTTCCGTTATCCATTTTTTCTCTCTCTCTCTCTCTCTCTTTCTCTCCCCCCTCGAAGATCTTCTCTCTCCCGGGAAATAAAAATATCCACACAAATTAGGGTTTCCTTGCGAATTTGGTTTCTTCAATTCGATTTCAACTCTTCCATCATGGTTACTGATTCGATCGCTAATGCTTCAATTTCTCTGGCCCCTAACGCCCGGGATTTGCCCCTGTCCAAGAAGAGGAGGGTGAGGACTCTCTCTCTCTTTTTGTTCAAACGTAAATCTTCTCATTTTTTCTTTTAATTTTAATGCCGGAGAGTTTTATTGTTTTTTTTTTTCTTTGATGATTACTGAATTTTCCCCCTAATTTGGTCGTAATTGTTTCGGCTGGGGATTTCAGGCTAGGAACTCCAAATTGAAGCAGTCCAAGCTTGACGTTCGTCGCGAGCAATGGCTTTCTCGAGGTATAACCACTAATTATGTTTCAATTTGTTGTTAATTGAATATATTGATGGAACGGACTTCATGCATGCGATAATTTGTATTTAATCGATTTGGGTTCACGAGTGATAGGTGCGATAAAGAACAAAAAATGGAGCGAAGAAGACAATCGGCTTGAGTCAGAGGTCGTCAAAACGGTGGAAGATGATAAACTTTCCTCCAAAAAAATAAATAGGAGGGAAATAGGAGAAGAGGACGACAGATCGGTCCACCATCACAGCGATTGTTCGGAGTCGCCGTCCAATAGCCCCCCTAGTATTGGAAGTAGTATCTTGGGTGGTAATGATTCGGGTCACCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGCAGCAGTTCTAGTGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGATGAAGGAGATGATGACTGCTTGGAAGATTGGGAGGCTTTTGCCGATACCCTAATCGCCACTGACAAGCAGCATGATCAATGCTCCGAGTCTTCCCCTAGGGGCGATGTTGTTTCTCAATTGGGTTCTTGCGAAGACAGCAGAAATGAGTTAGGCGTAGGAGATGGTGATTCGAGCATTGAGCATGGGAGAATTGCGCGGAGGGCTTCAATGAATGGCCGAGCATGGAGGCCTGATGATGCCGATCGTCCCCAGAGTTTGCCCACATTATCAAAACAGCTTAGTTTACCGAATACAGATCGGCGTTTTGGATGTGGAGGCGTCCCTTGGGCTTGTGGTGGTGTTGTGCCTGTACCTACATCTTGTCCAATTTGCTTTGAAGACTTGGACCTTACAGACTCAAACTTTTTACCTTGTCCCTGTGGATTCCGGCTATGCCTTTTCTGTCACAAGAGGATTCTTGAAGAGGATGGGCGTTGTCCTGGTTGCAGGAAGCCATATGATCGTGATCCTGCGGATAACGAGACAAACGAACACAGTGGCAGCCCGACGTTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAGGTAGTGTTCAGTTTCTGTGAGTTGTTAATGTACGTCTGCTCCACTTTTCTTTTCTTTTATTTTTCTGTCCTGCGTCTCTTGGGTACTATAGTAGTCTTGGGCTCTGATTTTCATAGTAATAGAAGTGGCATTTGGGTGTTGAAGTATGGTAATGAGATTGAGAACCTTTAAACTGAATTTCCTACAAGAGTGTGGTTCTTATCTTGTGGTACATTTGCCAATGTAGAGGACTTAATTCGTACTTGATATGTGAATAGATGAGATGGTATAGAAATAAATACATGGAATAATGATACAACGTTTGTCTGTTTTTCTTCACTTCCTTCTTTATTTGTATTTGCATATATTTCATAGGAATGCTGAAACTGTTCTATTTGTCGTCACCTTCCTCCTCATTCTTGTTGATCTTATGAGATTTAGTGTCATACTTGATTACTTCCTTGGAGTTATATAGCATAAAATGAAATGTGGAAATATTTGCAATACCTTCAGTTATGGTGTAGGAAACTATGATCCAAACTTGAAAGACAGCTATGCAGCTGGAAGTCTACTTGGATGAGTTGATTGTTGATGGGTTGTCTTAAGCTATCGGGGAGGAGAACGAAGCATTCTCGGAAATCTCTTTCTAGCAGATAGGGTTTGCTCAAAGAGACGATATTTGCTAACGATGGGCTTGAACTGTTACGTAAGCTATTCCAATTGCTGCGAACGAGGATTTTATCTGCTAGGCTTTTCTGTTCCAAATGGTTGCTCTGATGTGAATGTTTTGGCTCATTTTTCCTTTCTATAATATAATTTTCATGCTGTGTCTATATAAGGTTTATGTTCAACTTAAAATTGATTTCTAATTATCCCAATATCTTCTAGAGGGCTAAACGGCATTTGTCTCCATGAACAAGGCCTCTGCTCCTCAGCCCAGGTGGTCGGCAGTTTCTGTCGGAGATTACAAGGTTAGTTCTTATCTTCTTGAAAGCTCCGCCGTAAGTATAAAATTGGTGTCGAAATTGTTCCTGAACATATTCATTAAAAAGTTTAGTACAATTTTAGCACATTTTTTAGAGTAAGTTTCTAATTATTCATACAAACAGAAAGGATCCGGTTGGAACATTATTGTTTTATAAGTACAATGCCTTCATTAAGGTCGGACTACATCGAGTTAGTAGCATCCTCGGTATTCGCCATCCTCTCGATATCGTCCCTAATACAAGACTGTGATCTATGATGCTCAGGAAGTGTCTTCCACCACTCCATGAAAGTAGATTTCTTTAACAACATATCATTTTCAATCTCATTGACCCATCTCTTCATCTTCTTCTCCAACTCTAAGATTTCTCTTGAACATTCAGCGTACAGTTTGGTTCTGGTTTGGATACGAAGCTCCTCTACCTCTGCCCAAAGAGTCGATACTTCACTCGGCTCCGTCATCTTTTGATTATGTTCGAGCCATCTTTGTGTAAATCTGTAACGTTTTGGCCTTCCCTTTATCATATAAGGACCAGTATCATCATTCTTGGAGTGTCTATAGTAGTTAGCAATATCTAGAGGCTCATAGAGACAGCGAAACCTGGTTCCGATTTGTATCCATTCGTCCTGGCCCTCAAATTCATCCGGGAGCTCGTATCTTTTGAGCATTTCTACGATCTCGTCCCATATACCTGCTTGCTCAAGCCTCTTGATATTAGCTTGGAAGTCTTTCGGATCCTTCTGGAGTTTAAATGCATCATAATATCCCAAACCGTCAACCTTACATACATCTCTGTAATTTTCTTCTAGCCAATTCAATAGTTTCTCGATATCTTGTTTCTTTAGACTCATCCTTTCTTGATTTTTGATTTTCTGCTCTTCGTACGAGCCAGCTGCT

mRNA sequence

TGCTTATTCTGTGGAAAAGAGCGGACGAAGCAGAGGAGTTTCCGTTATCCATTTTTTCTCTCTCTCTCTCTCTCTCTTTCTCTCCCCCCTCGAAGATCTTCTCTCTCCCGGGAAATAAAAATATCCACACAAATTAGGGTTTCCTTGCGAATTTGGTTTCTTCAATTCGATTTCAACTCTTCCATCATGGTTACTGATTCGATCGCTAATGCTTCAATTTCTCTGGCCCCTAACGCCCGGGATTTGCCCCTGTCCAAGAAGAGGAGGGCTAGGAACTCCAAATTGAAGCAGTCCAAGCTTGACGTTCGTCGCGAGCAATGGCTTTCTCGAGGTGCGATAAAGAACAAAAAATGGAGCGAAGAAGACAATCGGCTTGAGTCAGAGGTCGTCAAAACGGTGGAAGATGATAAACTTTCCTCCAAAAAAATAAATAGGAGGGAAATAGGAGAAGAGGACGACAGATCGGTCCACCATCACAGCGATTGTTCGGAGTCGCCGTCCAATAGCCCCCCTAGTATTGGAAGTAGTATCTTGGGTGGTAATGATTCGGGTCACCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGCAGCAGTTCTAGTGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGATGAAGGAGATGATGACTGCTTGGAAGATTGGGAGGCTTTTGCCGATACCCTAATCGCCACTGACAAGCAGCATGATCAATGCTCCGAGTCTTCCCCTAGGGGCGATGTTGTTTCTCAATTGGGTTCTTGCGAAGACAGCAGAAATGAGTTAGGCGTAGGAGATGGTGATTCGAGCATTGAGCATGGGAGAATTGCGCGGAGGGCTTCAATGAATGGCCGAGCATGGAGGCCTGATGATGCCGATCGTCCCCAGAGTTTGCCCACATTATCAAAACAGCTTAGTTTACCGAATACAGATCGGCGTTTTGGATGTGGAGGCGTCCCTTGGGCTTGTGGTGGTGTTGTGCCTGTACCTACATCTTGTCCAATTTGCTTTGAAGACTTGGACCTTACAGACTCAAACTTTTTACCTTGTCCCTGTGGATTCCGGCTATGCCTTTTCTGTCACAAGAGGATTCTTGAAGAGGATGGGCGTTGTCCTGGTTGCAGGAAGCCATATGATCGTGATCCTGCGGATAACGAGACAAACGAACACAGTGGCAGCCCGACGTTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAGGTAGTGTTCAGTTTCTGTGAGTTGTTAATTTATGGTGTAGGAAACTATGATCCAAACTTGAAAGACAGCTATGCAGCTGGAAGTCTACTTGGATGAGTTGATTGTTGATGGGTTGTCTTAAGCTATCGGGGAGGAGAACGAAGCATTCTCGGAAATCTCTTTCTAGCAGATAGGGTTTGCTCAAAGAGACGATATTTGCTAACGATGGGCTTGAACTGTTACAGGGCTAAACGGCATTTGTCTCCATGAACAAGGCCTCTGCTCCTCAGCCCAGGTGGTCGGCAGTTTCTGTCGGAGATTACAAGGTTAGTTCTTATCTTCTTGAAAGCTCCGCCGTAAGTATAAAATTGGTGTCGAAATTGTTCCTGAACATATTCATTAAAAAGTTTAGTACAATTTTAGCACATTTTTTAGAGTAAGTTTCTAATTATTCATACAAACAGAAAGGATCCGGTTGGAACATTATTGTTTTATAAGTACAATGCCTTCATTAAGGTCGGACTACATCGAGTTAGTAGCATCCTCGGTATTCGCCATCCTCTCGATATCGTCCCTAATACAAGACTGTGATCTATGATGCTCAGGAAGTGTCTTCCACCACTCCATGAAAGTAGATTTCTTTAACAACATATCATTTTCAATCTCATTGACCCATCTCTTCATCTTCTTCTCCAACTCTAAGATTTCTCTTGAACATTCAGCGTACAGTTTGGTTCTGGTTTGGATACGAAGCTCCTCTACCTCTGCCCAAAGAGTCGATACTTCACTCGGCTCCGTCATCTTTTGATTATGTTCGAGCCATCTTTGTGTAAATCTGTAACGTTTTGGCCTTCCCTTTATCATATAAGGACCAGTATCATCATTCTTGGAGTGTCTATAGTAGTTAGCAATATCTAGAGGCTCATAGAGACAGCGAAACCTGGTTCCGATTTGTATCCATTCGTCCTGGCCCTCAAATTCATCCGGGAGCTCGTATCTTTTGAGCATTTCTACGATCTCGTCCCATATACCTGCTTGCTCAAGCCTCTTGATATTAGCTTGGAAGTCTTTCGGATCCTTCTGGAGTTTAAATGCATCATAATATCCCAAACCGTCAACCTTACATACATCTCTGTAATTTTCTTCTAGCCAATTCAATAGTTTCTCGATATCTTGTTTCTTTAGACTCATCCTTTCTTGATTTTTGATTTTCTGCTCTTCGTACGAGCCAGCTGCT

Coding sequence (CDS)

ATGGTTACTGATTCGATCGCTAATGCTTCAATTTCTCTGGCCCCTAACGCCCGGGATTTGCCCCTGTCCAAGAAGAGGAGGGCTAGGAACTCCAAATTGAAGCAGTCCAAGCTTGACGTTCGTCGCGAGCAATGGCTTTCTCGAGGTGCGATAAAGAACAAAAAATGGAGCGAAGAAGACAATCGGCTTGAGTCAGAGGTCGTCAAAACGGTGGAAGATGATAAACTTTCCTCCAAAAAAATAAATAGGAGGGAAATAGGAGAAGAGGACGACAGATCGGTCCACCATCACAGCGATTGTTCGGAGTCGCCGTCCAATAGCCCCCCTAGTATTGGAAGTAGTATCTTGGGTGGTAATGATTCGGGTCACCATTTTACTGGGAGTAGCAGTAGTAGTAGCTGCCGCAGCAGTTCTAGTGGTTGTCGCTCGGGGAGTATAACGGAGGAGGAGGAAGATGAAGGAGATGATGACTGCTTGGAAGATTGGGAGGCTTTTGCCGATACCCTAATCGCCACTGACAAGCAGCATGATCAATGCTCCGAGTCTTCCCCTAGGGGCGATGTTGTTTCTCAATTGGGTTCTTGCGAAGACAGCAGAAATGAGTTAGGCGTAGGAGATGGTGATTCGAGCATTGAGCATGGGAGAATTGCGCGGAGGGCTTCAATGAATGGCCGAGCATGGAGGCCTGATGATGCCGATCGTCCCCAGAGTTTGCCCACATTATCAAAACAGCTTAGTTTACCGAATACAGATCGGCGTTTTGGATGTGGAGGCGTCCCTTGGGCTTGTGGTGGTGTTGTGCCTGTACCTACATCTTGTCCAATTTGCTTTGAAGACTTGGACCTTACAGACTCAAACTTTTTACCTTGTCCCTGTGGATTCCGGCTATGCCTTTTCTGTCACAAGAGGATTCTTGAAGAGGATGGGCGTTGTCCTGGTTGCAGGAAGCCATATGATCGTGATCCTGCGGATAACGAGACAAACGAACACAGTGGCAGCCCGACGTTCCCATTGGCTCGTTCTTGTAGCATGATTTCAAGGTCTTAG

Protein sequence

MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEEDNRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCEDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS

Homology

[Close]

BLAST of Cp4.1LG18g08170 vs. ExPASy Swiss-Prot
Match: O95628 (CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 SV=3)

HSP 1 Score: 78.6 bits (192), Expect = 1.6e-13
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 270 PTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA 324
           P  CP+C E L++ D NF PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Sbjct: 11  PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPA 65

[Close]

BLAST of Cp4.1LG18g08170 vs. ExPASy Swiss-Prot
Match: Q8BT14 (CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 1.6e-13
Identity = 30/55 (54.55%), Postives = 38/55 (69.09%), Query Frame = 0


Query: 270 PTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRI-LEEDGRCPGCRKPYDRDPA 324
           P  CP+C E L++ D NF PC CG+++C FC  RI  +E+G CP CRKPY  DPA
Sbjct: 11  PVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDPA 65

[Close]

BLAST of Cp4.1LG18g08170 vs. ExPASy Swiss-Prot
Match: P34909 (General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MOT2 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.0e-12
Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 273 CPICFEDLDLTDSNFLPCPCGFRLCLFCHKRIL---EEDGRCPGCRKPYD 320
           CP+C E +D+TD NF PCPCG+++C FC+  I    E +GRCP CR+ YD
Sbjct: 33  CPLCIEPMDITDKNFFPCPCGYQICQFCYNNIRQNPELNGRCPACRRKYD 82

[Close]

BLAST of Cp4.1LG18g08170 vs. ExPASy Swiss-Prot
Match: Q09818 (Putative general negative regulator of transcription C16C9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC16C9.04c PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.3e-10
Identity = 25/50 (50.00%), Postives = 36/50 (72.00%), Query Frame = 0


Query: 273 CPICFEDLDLTDSNFLPCPCGFRLCLFCHKRILEE-DGRCPGCRKPYDRD 322
           CP+C E++D++D NF PC CG+R+C FC   I E+ +GRCP CR+ Y  +
Sbjct: 18  CPLCMEEIDISDKNFKPCQCGYRVCRFCWHHIKEDLNGRCPACRRLYTEE 67

[Close]

BLAST of Cp4.1LG18g08170 vs. ExPASy Swiss-Prot
Match: Q9M9M4 (Cellulose synthase-like protein D3 OS=Arabidopsis thaliana OX=3702 GN=CSLD3 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04
Identity = 23/68 (33.82%), Postives = 32/68 (47.06%), Query Frame = 0


Query: 281 DLTDSNFLPCPCGFRLCLFCHKRILEEDGRCPGCRKPY-DRDPADNETNEHSGSPTFPLA 340
           D    + LPC C F++C  C    ++  G CPGC++PY + D AD   N     P  P  
Sbjct: 142 DERGQDLLPCECDFKICRDCFMDAVKTGGMCPGCKEPYRNTDLADFADNNKQQRPMLPPP 201

Query: 341 RSCSMISR 348
              S + R
Sbjct: 202 AGGSKMDR 209

[Close]

BLAST of Cp4.1LG18g08170 vs. NCBI nr
Match: XP_023516237.1 (uncharacterized protein LOC111780152 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 700 bits (1806), Expect = 2.99e-254
Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60
           MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED
Sbjct: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60

Query: 61  NRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120
           NRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND
Sbjct: 61  NRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120

Query: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180
           SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 181 ESSPRGDVVSQLGSCEDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240
           ESSPRGDVVSQLGSCEDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCEDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240

Query: 241 LSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300
           LSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348
           HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348

[Close]

BLAST of Cp4.1LG18g08170 vs. NCBI nr
Match: KAG6589475.1 (CCR4-NOT transcription complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 687 bits (1773), Expect = 3.21e-249
Identity = 339/348 (97.41%), Postives = 346/348 (99.43%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60
           MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWS+ED
Sbjct: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKED 60

Query: 61  NRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120
           NRL+SEVVKTVEDDKL SKKINRR+IGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND
Sbjct: 61  NRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120

Query: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180
           SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 181 ESSPRGDVVSQLGSCEDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240
           ESSPRGDVVSQLGSC DSRNELG+GDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCGDSRNELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240

Query: 241 LSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300
           LSKQLSLPNTDRRFGCGG+PWACGGV+PVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348
           HKRILEEDGRCPGCRKPYDRDPADNETNE+SGSPTFPLARSCSMISRS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS 348

[Close]

BLAST of Cp4.1LG18g08170 vs. NCBI nr
Match: XP_022988378.1 (uncharacterized protein LOC111485637 [Cucurbita maxima])

HSP 1 Score: 686 bits (1771), Expect = 6.48e-249
Identity = 341/348 (97.99%), Postives = 344/348 (98.85%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60
           MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKW+EED
Sbjct: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 60

Query: 61  NRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120
           NRL+SEVVKTVEDD LSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 120

Query: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180
           SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDE DDDCLEDWEAFADTLIATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 181 ESSPRGDVVSQLGSCEDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240
           ESSPRGDVVSQLGSC DSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240

Query: 241 LSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300
           LSKQLSLPNTDRRFGCG VPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348
           HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348

[Close]

BLAST of Cp4.1LG18g08170 vs. NCBI nr
Match: XP_022921889.1 (uncharacterized protein LOC111430021 [Cucurbita moschata])

HSP 1 Score: 686 bits (1770), Expect = 9.21e-249
Identity = 339/348 (97.41%), Postives = 345/348 (99.14%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60
           MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWS+ED
Sbjct: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKED 60

Query: 61  NRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120
           NRL+SEVVKTVEDDKL SKKINRR+IGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND
Sbjct: 61  NRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120

Query: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180
           SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 181 ESSPRGDVVSQLGSCEDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240
           ESSPRGDVVSQLGSC DSRNELGVGDGDSSIEHGRI RRASMNGRAWRPDDADRPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCVDSRNELGVGDGDSSIEHGRIVRRASMNGRAWRPDDADRPQSLPT 240

Query: 241 LSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300
           LSKQLSLPNTDRRFGCGG+PWACGGV+PVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348
           HKRILEEDGRCPGCRKPYDRDPADNETNE+SGSPTFPLARSCSMISRS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS 348

[Close]

BLAST of Cp4.1LG18g08170 vs. NCBI nr
Match: KAG7023160.1 (CCR4-NOT transcription complex subunit 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 685 bits (1768), Expect = 1.86e-248
Identity = 338/348 (97.13%), Postives = 346/348 (99.43%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60
           MVTDSIANASISLAP+ARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWS+ED
Sbjct: 1   MVTDSIANASISLAPSARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKED 60

Query: 61  NRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120
           NRL+SEVVKTVEDDKL SKKINRR+IGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND
Sbjct: 61  NRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120

Query: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180
           SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 181 ESSPRGDVVSQLGSCEDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240
           ESSPRGDVVSQLGSC DSRNELG+GDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCGDSRNELGIGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240

Query: 241 LSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300
           LSKQLSLPNTDRRFGCGG+PWACGGV+PVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348
           HKRILEEDGRCPGCRKPYDRDPADNETNE+SGSPTFPLARSCSMISRS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS 348

[Close]

BLAST of Cp4.1LG18g08170 vs. ExPASy TrEMBL
Match: A0A6J1JM47 (uncharacterized protein LOC111485637 OS=Cucurbita maxima OX=3661 GN=LOC111485637 PE=4 SV=1)

HSP 1 Score: 686 bits (1771), Expect = 3.14e-249
Identity = 341/348 (97.99%), Postives = 344/348 (98.85%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60
           MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKW+EED
Sbjct: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWNEED 60

Query: 61  NRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120
           NRL+SEVVKTVEDD LSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSEVVKTVEDDNLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSMGSSILGGND 120

Query: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180
           SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDE DDDCLEDWEAFADTLIATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEEDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 181 ESSPRGDVVSQLGSCEDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240
           ESSPRGDVVSQLGSC DSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCGDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240

Query: 241 LSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300
           LSKQLSLPNTDRRFGCG VPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGSVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348
           HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348

[Close]

BLAST of Cp4.1LG18g08170 vs. ExPASy TrEMBL
Match: A0A6J1E1T5 (uncharacterized protein LOC111430021 OS=Cucurbita moschata OX=3662 GN=LOC111430021 PE=4 SV=1)

HSP 1 Score: 686 bits (1770), Expect = 4.46e-249
Identity = 339/348 (97.41%), Postives = 345/348 (99.14%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60
           MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWS+ED
Sbjct: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSKED 60

Query: 61  NRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120
           NRL+SEVVKTVEDDKL SKKINRR+IGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND
Sbjct: 61  NRLDSEVVKTVEDDKLPSKKINRRDIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120

Query: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180
           SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS
Sbjct: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCS 180

Query: 181 ESSPRGDVVSQLGSCEDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPT 240
           ESSPRGDVVSQLGSC DSRNELGVGDGDSSIEHGRI RRASMNGRAWRPDDADRPQSLPT
Sbjct: 181 ESSPRGDVVSQLGSCVDSRNELGVGDGDSSIEHGRIVRRASMNGRAWRPDDADRPQSLPT 240

Query: 241 LSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300
           LSKQLSLPNTDRRFGCGG+PWACGGV+PVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC
Sbjct: 241 LSKQLSLPNTDRRFGCGGIPWACGGVMPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFC 300

Query: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348
           HKRILEEDGRCPGCRKPYDRDPADNETNE+SGSPTFPLARSCSMISRS
Sbjct: 301 HKRILEEDGRCPGCRKPYDRDPADNETNEYSGSPTFPLARSCSMISRS 348

[Close]

BLAST of Cp4.1LG18g08170 vs. ExPASy TrEMBL
Match: A0A1S3BVJ1 (uncharacterized protein LOC103493947 OS=Cucumis melo OX=3656 GN=LOC103493947 PE=4 SV=1)

HSP 1 Score: 608 bits (1567), Expect = 3.99e-218
Identity = 306/349 (87.68%), Postives = 324/349 (92.84%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60
           MVTDSIANASISLAPNARDLPL KK+R RNSKLKQSKLDVRREQWLSRGA+KNKKW+EED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120
           NRL+S V+KT +DD LSS+KIN REIGEE+DRSVHHHSD S+SPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDE-GDDDCLEDWEAFADTLIATDKQHDQC 180
           SG HFTGSSSSSSCRSSSSGCRSGSITEEEE+E GDDDCL+DWEA AD L ATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGDVVSQLGSCEDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLP 240
           SESSPRG+VVSQL SC D RNELGVGDGDS++E GRI +RASMN RAWRPDDA RPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLF 300
           TLSKQLSLPNTDRRFGCGGVPWACGGV+PVPTSCPICFEDLDLTDS+FLPC CGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 348
           CHKRILEEDGRCPGCRKPYDRDPADNETN   GSPT PLARSCSMISRS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISRS 349

[Close]

BLAST of Cp4.1LG18g08170 vs. ExPASy TrEMBL
Match: A0A5A7UPV5 (Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002030 PE=4 SV=1)

HSP 1 Score: 607 bits (1564), Expect = 1.44e-216
Identity = 305/348 (87.64%), Postives = 323/348 (92.82%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60
           MVTDSIANASISLAPNARDLPL KK+R RNSKLKQSKLDVRREQWLSRGA+KNKKW+EED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120
           NRL+S V+KT +DD LSS+KIN REIGEE+DRSVHHHSD S+SPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDE-GDDDCLEDWEAFADTLIATDKQHDQC 180
           SG HFTGSSSSSSCRSSSSGCRSGSITEEEE+E GDDDCL+DWEA AD L ATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGDVVSQLGSCEDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLP 240
           SESSPRG+VVSQL SC D RNELGVGDGDS++E GRI +RASMN RAWRPDDA RPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLF 300
           TLSKQLSLPNTDRRFGCGGVPWACGGV+PVPTSCPICFEDLDLTDS+FLPC CGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISR 347
           CHKRILEEDGRCPGCRKPYDRDPADNETN   GSPT PLARSCSMISR
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMISR 348

[Close]

BLAST of Cp4.1LG18g08170 vs. ExPASy TrEMBL
Match: A0A5D3BIS7 (Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002110 PE=4 SV=1)

HSP 1 Score: 605 bits (1559), Expect = 9.03e-215
Identity = 304/347 (87.61%), Postives = 322/347 (92.80%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60
           MVTDSIANASISLAPNARDLPL KK+R RNSKLKQSKLDVRREQWLSRGA+KNKKW+EED
Sbjct: 1   MVTDSIANASISLAPNARDLPLPKKKRVRNSKLKQSKLDVRREQWLSRGAVKNKKWNEED 60

Query: 61  NRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120
           NRL+S V+KT +DD LSS+KIN REIGEE+DRSVHHHSD S+SPSNSPPS+GSSILGGND
Sbjct: 61  NRLDSVVIKTRKDDNLSSEKINMREIGEENDRSVHHHSDYSDSPSNSPPSLGSSILGGND 120

Query: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDE-GDDDCLEDWEAFADTLIATDKQHDQC 180
           SG HFTGSSSSSSCRSSSSGCRSGSITEEEE+E GDDDCL+DWEA AD L ATDKQ DQC
Sbjct: 121 SGPHFTGSSSSSSCRSSSSGCRSGSITEEEEEEEGDDDCLDDWEAIADALAATDKQRDQC 180

Query: 181 SESSPRGDVVSQLGSCEDSRNELGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLP 240
           SESSPRG+VVSQL SC D RNELGVGDGDS++E GRI +RASMN RAWRPDDA RPQSLP
Sbjct: 181 SESSPRGNVVSQLDSCGDRRNELGVGDGDSNVERGRIVQRASMNCRAWRPDDAFRPQSLP 240

Query: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLF 300
           TLSKQLSLPNTDRRFGCGGVPWACGGV+PVPTSCPICFEDLDLTDS+FLPC CGFRLCLF
Sbjct: 241 TLSKQLSLPNTDRRFGCGGVPWACGGVLPVPTSCPICFEDLDLTDSSFLPCFCGFRLCLF 300

Query: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMIS 346
           CHKRILEEDGRCPGCRKPYDRDPADNETN   GSPT PLARSCSMIS
Sbjct: 301 CHKRILEEDGRCPGCRKPYDRDPADNETNILVGSPTLPLARSCSMIS 347

[Close]

BLAST of Cp4.1LG18g08170 vs. TAIR 10
Match: AT3G48070.1 (RING/U-box superfamily protein )

HSP 1 Score: 246.1 bits (627), Expect = 4.1e-65
Identity = 168/359 (46.80%), Postives = 211/359 (58.77%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60
           M++DSI NAS + AP ARD    KKR  R++KLKQSKL +RREQWLS+ A+ NK   EE 
Sbjct: 1   MISDSITNASATSAPTARDFG-KKKRTNRSAKLKQSKLGLRREQWLSQVAMINKGDKEE- 60

Query: 61  NRLESEVVKTVEDDKLSSKKINRREIG------EEDDRSVHHHSDCSESPSNSPPSIGSS 120
             +ES       + ++ S+K ++R++       +ED+   H H    ES SNSP    +S
Sbjct: 61  --MES-------NRRIGSEKPDQRDLPRPVENLDEDNNGTHRHESFIESLSNSP----NS 120

Query: 121 ILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDK 180
           IL G +S  +F+ SSS     S S G  SG+IT EEED  DD CL+DWEA AD L A D+
Sbjct: 121 ILSGMNSIPNFSSSSS-----SGSGGSCSGNIT-EEEDADDDGCLDDWEAIADALAADDE 180

Query: 181 QHDQCSESSPRGDVVSQLGSC---EDSRNELGVGDGDSSIEHGRI--ARRASMNGRAWRP 240
           +H++  E+ P         SC   ED +    +G  D  +   +    RR   + +AWRP
Sbjct: 181 KHEK--ENPPE--------SCQEHEDIKQSALIGGADVVLRDAKADSQRRKQKSNQAWRP 240

Query: 241 DDADRPQSLPTLSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLP 300
           DD  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDSNFLP
Sbjct: 241 DDKLRPQGLPNLEKQRSFPVMNLHF---------SSVTVVPSSCPICYEDLDLTDSNFLP 300

Query: 301 CPCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISRS 349
           CPCGFRLCLFCHK I + DGRCPGCRKPY+R+    E +   G  T  LARS SM  RS
Sbjct: 301 CPCGFRLCLFCHKTICDGDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSMFCRS 319

[Close]

BLAST of Cp4.1LG18g08170 vs. TAIR 10
Match: AT3G48070.2 (RING/U-box superfamily protein )

HSP 1 Score: 245.0 bits (624), Expect = 9.1e-65
Identity = 167/358 (46.65%), Postives = 210/358 (58.66%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60
           M++DSI NAS + AP ARD    KKR  R++KLKQSKL +RREQWLS+ A+ NK   EE 
Sbjct: 1   MISDSITNASATSAPTARDFG-KKKRTNRSAKLKQSKLGLRREQWLSQVAMINKGDKEE- 60

Query: 61  NRLESEVVKTVEDDKLSSKKINRREIG------EEDDRSVHHHSDCSESPSNSPPSIGSS 120
             +ES       + ++ S+K ++R++       +ED+   H H    ES SNSP    +S
Sbjct: 61  --MES-------NRRIGSEKPDQRDLPRPVENLDEDNNGTHRHESFIESLSNSP----NS 120

Query: 121 ILGGNDSGHHFTGSSSSSSCRSSSSGCRSGSITEEEEDEGDDDCLEDWEAFADTLIATDK 180
           IL G +S  +F+ SSS     S S G  SG+IT EEED  DD CL+DWEA AD L A D+
Sbjct: 121 ILSGMNSIPNFSSSSS-----SGSGGSCSGNIT-EEEDADDDGCLDDWEAIADALAADDE 180

Query: 181 QHDQCSESSPRGDVVSQLGSC---EDSRNELGVGDGDSSIEHGRI--ARRASMNGRAWRP 240
           +H++  E+ P         SC   ED +    +G  D  +   +    RR   + +AWRP
Sbjct: 181 KHEK--ENPPE--------SCQEHEDIKQSALIGGADVVLRDAKADSQRRKQKSNQAWRP 240

Query: 241 DDADRPQSLPTLSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLP 300
           DD  RPQ LP L KQ S P  +  F           V  VP+SCPIC+EDLDLTDSNFLP
Sbjct: 241 DDKLRPQGLPNLEKQRSFPVMNLHF---------SSVTVVPSSCPICYEDLDLTDSNFLP 300

Query: 301 CPCGFRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISR 348
           CPCGFRLCLFCHK I + DGRCPGCRKPY+R+    E +   G  T  LARS SM  R
Sbjct: 301 CPCGFRLCLFCHKTICDGDGRCPGCRKPYERNTIKFEASVQGGGLTIRLARSSSMFCR 318

[Close]

BLAST of Cp4.1LG18g08170 vs. TAIR 10
Match: AT5G62910.1 (RING/U-box superfamily protein )

HSP 1 Score: 244.6 bits (623), Expect = 1.2e-64
Identity = 167/354 (47.18%), Postives = 210/354 (59.32%), Query Frame = 0


Query: 1   MVTDSIANASISLAPNARDLPLSKKRRARNSKLKQSKLDVRREQWLSRGAIKNKKWSEED 60
           M+TDSI NAS + AP  RD    KKR  +++K+KQ+KL +RREQWLS+ A+ NK+  EE 
Sbjct: 1   MITDSITNASATSAP--RDSG-KKKRNNKSAKMKQNKLGLRREQWLSQVAVSNKEVKEER 60

Query: 61  NRLESEVVKTVEDDKLSSKKINRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGND 120
           +   S+       DK+      RRE       ++ HH    ESPSNS        +GG  
Sbjct: 61  SVNRSQKPHHESSDKV------RREEDNNGGNNLLHHESFMESPSNSS-------VGGTY 120

Query: 121 SGHHFTGSSSSSSCRSSSSGCRSGSITEEEE-DEGDDDCLEDWEAFADTLIATD--KQHD 180
           S  +F+G SS SS  SSSSG  SG+ITEEE  D+ DD C++DWEA AD L A +  ++  
Sbjct: 121 SSTNFSGRSSRSS--SSSSGFCSGNITEEENVDDDDDGCVDDWEAVADALAAEEEIEKKS 180

Query: 181 QCSESSPRGDVVSQLGS--CEDSRNELG--VGDGDSSIEHGRIARRASMNGRAWRPDDAD 240
           +  ES      V Q  S  C+ S ++    VG  D   E  R++ R   + RAWR DD  
Sbjct: 181 RPLESVKEQVSVGQSASNVCDSSISDASDVVGVEDPKQECLRVSSRKQTSNRAWRLDDDL 240

Query: 241 RPQSLPTLSKQLSLPNTDRRFGCGGVPWACGGVVPVPTSCPICFEDLDLTDSNFLPCPCG 300
           RPQ LP L+KQLS P  D+RF            V +P+SCPIC+EDLDLTDSNFLPCPCG
Sbjct: 241 RPQGLPNLAKQLSFPELDKRFSS----------VAIPSSCPICYEDLDLTDSNFLPCPCG 300

Query: 301 FRLCLFCHKRILEEDGRCPGCRKPYDRDPADNETNEHSGSPTFPLARSCSMISR 348
           FRLCLFCHK I + DGRCPGCRKPY+R+    ET+   G  T  LARS SM  +
Sbjct: 301 FRLCLFCHKTICDGDGRCPGCRKPYERNMVKAETSIQGGGLTIRLARSSSMFCK 326

[Close]

BLAST of Cp4.1LG18g08170 vs. TAIR 10
Match: AT1G74870.1 (RING/U-box superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 5.4e-17
Identity = 94/329 (28.57%), Postives = 145/329 (44.07%), Query Frame = 0


Query: 23  SKKRRAR-NSKLKQSKLDVRREQWLSRGAIKNKKWSEEDNRLESEVVKTVEDDKLSSKKI 82
           SKKR+A    KLKQ K+D RR+QW+S+    N    E   RL S +      +KL+ +K 
Sbjct: 20  SKKRKANWFCKLKQWKIDARRKQWISQWKKANVDEEEIGRRLRSLL------EKLTDQKA 79

Query: 83  NRREIGEEDDRSVHHHSDCSESPSNSPPSIGSSILGGNDSGHHFTGSSSSSSCRSSSSGC 142
            R +  +++D  +    + + S ++SP    +S+L   DS              S    C
Sbjct: 80  WRIDYDDDEDDEI--DLERTSSFASSP----TSVLKRKDS-------------VSGDCFC 139

Query: 143 RSGSITEEEEDEGDDDCLEDWEAFADTLIATDKQHDQCSESSPRGDVVSQLGSCEDSRNE 202
            S  +TEEEE E  DD  ++W+ F D L + +  +++ S               ED   E
Sbjct: 140 CSKQMTEEEE-EVFDDAYDNWDGFKDALNSFENDNNESSRL-----------VTEDFEQE 199

Query: 203 LGVGDGDSSIEHGRIARRASMNGRAWRPDDADRPQSLPTLSKQLSLPNTDRRFGCGGVPW 262
                 D+S    +  + A+   +           ++   S +    N++++ G G    
Sbjct: 200 EEDLIPDTSQRMNKCKQEAAPGNQT----------TIHRNSNKKKRSNSEKQRGDG---- 259

Query: 263 ACGGVVPVPTSCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRILEEDGRCPGCRKPYDR- 322
                      CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK Y + 
Sbjct: 260 --------DEECPICSELMDATDLEFEPCTCGFRICLFCHNKISENEARCPACRKDYKKT 289

Query: 323 -DPADNETNEHSGSPTFPLARSCSMISRS 349
              +     +  G  T PL+ S   + R+
Sbjct: 320 SKKSGEVGYQQRGRGTIPLSPSFRGLDRA 289

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BLAST of Cp4.1LG18g08170 vs. TAIR 10
Match: AT3G45630.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 68.9 bits (167), Expect = 8.9e-12
Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 0


Query: 272 SCPICFEDLDLTDSNFLPCPCGFRLCLFCHKRIL------EEDGRCPGCRKPYDRD 322
           +CP+C E++DLTD    PC CG+++C++C   I+      + +GRCP CR PYD++
Sbjct: 8   TCPLCAEEMDLTDQQLKPCKCGYQICVWCWHHIMDMAEKDQSEGRCPACRTPYDKE 63

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g08170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O95628	1.6e-13	54.55	CCR4-NOT transcription complex subunit 4 OS=Homo sapiens OX=9606 GN=CNOT4 PE=1 S...	[more]
Q8BT14	1.6e-13	54.55	CCR4-NOT transcription complex subunit 4 OS=Mus musculus OX=10090 GN=Cnot4 PE=1 ...	[more]
P34909	3.0e-12	54.00	General negative regulator of transcription subunit 4 OS=Saccharomyces cerevisia...	[more]
Q09818	1.3e-10	50.00	Putative general negative regulator of transcription C16C9.04c OS=Schizosaccharo...	[more]
Q9M9M4	3.0e-04	33.82	Cellulose synthase-like protein D3 OS=Arabidopsis thaliana OX=3702 GN=CSLD3 PE=1...	[more]

BLAST of Cp4.1LG18g08170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516237.1	2.99e-254	100.00	uncharacterized protein LOC111780152 [Cucurbita pepo subsp. pepo]	[more]
KAG6589475.1	3.21e-249	97.41	CCR4-NOT transcription complex subunit 4, partial [Cucurbita argyrosperma subsp....	[more]
XP_022988378.1	6.48e-249	97.99	uncharacterized protein LOC111485637 [Cucurbita maxima]	[more]
XP_022921889.1	9.21e-249	97.41	uncharacterized protein LOC111430021 [Cucurbita moschata]	[more]
KAG7023160.1	1.86e-248	97.13	CCR4-NOT transcription complex subunit 4 [Cucurbita argyrosperma subsp. argyrosp...	[more]

BLAST of Cp4.1LG18g08170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JM47	3.14e-249	97.99	uncharacterized protein LOC111485637 OS=Cucurbita maxima OX=3661 GN=LOC111485637...	[more]
A0A6J1E1T5	4.46e-249	97.41	uncharacterized protein LOC111430021 OS=Cucurbita moschata OX=3662 GN=LOC1114300...	[more]
A0A1S3BVJ1	3.99e-218	87.68	uncharacterized protein LOC103493947 OS=Cucumis melo OX=3656 GN=LOC103493947 PE=...	[more]
A0A5A7UPV5	1.44e-216	87.64	Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5D3BIS7	9.03e-215	87.61	Suppressor protein SRP40 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Cp4.1LG18g08170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48070.1	4.1e-65	46.80	RING/U-box superfamily protein	[more]
AT3G48070.2	9.1e-65	46.65	RING/U-box superfamily protein	[more]
AT5G62910.1	1.2e-64	47.18	RING/U-box superfamily protein	[more]
AT1G74870.1	5.4e-17	28.57	RING/U-box superfamily protein	[more]
AT3G45630.1	8.9e-12	42.86	RNA binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14570	zf-RING_4	coord: 273..319 e-value: 2.5E-19 score: 68.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 322..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..197
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..348
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 223..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..210
None	No IPR available	PANTHER	PTHR12603:SF7	RING/U-BOX SUPERFAMILY PROTEIN	coord: 8..346
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 271..323
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 269..332 e-value: 7.7E-20 score: 72.0
IPR039780	CCR4-NOT transcription complex subunit 4	PANTHER	PTHR12603	CCR4-NOT TRANSCRIPTION COMPLEX RELATED	coord: 8..346
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 273..315 score: 9.700961
IPR039515	NOT4, modified RING finger, HC subclass (C4C4-type)	CDD	cd16618	mRING-HC-C4C4_CNOT4	coord: 273..316 e-value: 8.79469E-20 score: 79.5808

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g08170.1	Cp4.1LG18g08170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0004842	ubiquitin-protein transferase activity