Cp4.1LG18g07910 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g07910
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein EMBRYO DEFECTIVE 514-like
Location	Cp4.1LG18: 7465716 .. 7468178 (-)
RNA-Seq Expression	Cp4.1LG18g07910
Synteny	Cp4.1LG18g07910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTTTTATTTTCTTAGGGTTTTTACTTTTGAAGTTTTGAAGTTTCAGAGCACACTTGCAAGTTACAATGGCAGAAGAAACAATCCCTCAACCGGCTGACAACAATCAGGAGGTGACCAACGCCGAAGACATGGAATTGGAGAACACAGAGCCCGGAGCAGAGCCGAAAGGATCAAATGATGAAGCAAATGAGGCTGCAAAAGTGACCAATGGCGATGCAAATTCGAAGCGGGAGAGGGACGAAGAAAGCGCCGATGGCAGCGTCGAAGAGGCGAAGAAGCAGAAGATGGAGAAGTCAGTTGAAGAGGGAAGGATTGAGAAGGCGCAAGGAGACGGGAAGGGAGAGGAGGAGCCCGGTCCTGTGACTATAGGCCCTAAGAGCTTTCGATCGTCGAGGGAATTGTTTGATCACTTCTATAAATTCCTCCACCACTGGCCTGCCTACTTGAACGTGAACCAGGTTTCATATTATGGACTTCTTTTTAATTTGCTATCGTCCTCTGTTTTGTTAATTGAAAGGTTGAGTTGAGAATGATGCTTATGAAATTTTATGTTAGTTTTAGAACGCAGAGCTGGAACTTGATTGAAATATTTTCTTTTCCCCCAATATTGCTGTTATGGTTTATCATCATCATTATTTTATTTTGTGAAAGTTACATCTGTCTGAAGGGAAAACGAATTGCAAAAGGAGGTGTAGATTTAGGTATCTTGATCCTCAGGAATGGTGAACAATTTTAGCAGGACTTTTTGTTCTAGTCACTTGTTTGAGAAACTGTTGTAATTGTGTACATAATAGAATCAGAGAGGTGACATTCTTCAATATTCTCATGAAATTAATGATGGTTGGTATCAGTTCTGCTCAAAATCCATTTACAGATTTAGATGTTAACACAATCAATCAAAGAATTCCACCATGGATGAATAAAGTTTATTTCTATCTGTGAATCTACTCTCTTGACCTTATTTGCTCATTGAATAAAGTTTTTTTTTTTTTTTTTTTTTTGCATTGTTTTGCTGTTATTCTTTATGATTCCCTTCTTATTCTTGATTGATGTTAGTGGAAGGAACGGATATGCTATATCTATTTATTGATTTCTTTCTGGCATATCCTGTGATGTAGCAAATTATTGAGCATGTACTTATATGGTATAATTTTGCAGTCCAAAAGGGGAAGTAATAATTAGTGTTTAGAAATCCATGTATTCATGGCCGGTACAGGCTGTGATCGCATCGTTATGAAAAAAGTCCTTAAATTGAAAGGCAGTTGGGTGTTATTATTTGTATTCCGTAGCAAATATTAGTACTACTAAAGTCTACCTTTAGCATTTAGTATAACACCCCAAACCAATCGCTAATAGATATTGTCCTCTTTAGGCTTTCCCTCAAGGTTTTCATAGGTTTCCACACTCTTAGAAGGAACGCTTCGTTCCTCTCTCTAACCGATGTGGGATCTCACAATCCCACCTCCCTTAGAGCCCGGCGTCCTTGTTGGCACACCATCCGGTGTCTGGCTTTGATACCATTTGTAACAGCTCAAGCCCACCACTACAAATATTGTTCTTTTGGACTTTCTCTTTTGGGCTTCCCTTCTAGGTTTTAAAACGCCTCTACTAGGAAGAGGTTTACACACTCTTATAAAGAATGCTTCGTTTTTCTTCCCAAATGATGTGGGACCTCACATTTATAGCCTACTTTACTATAACTTTAATGGAACATTAGTAATATCTTTTGTAGGTTTGTATATTGTGGAGGCATTGATTCTGTTGATGATTCAATATTTGATATTTGTTTGTGTGGCAGTACGAGAAGATGATGTTGCTGGATTTGCTGAAGAAGGGGCATGCAGAACCAGAGAAAAAGATAGGGTGTGGTATTCATTCTTTCCAAATTCGAAACCATCCTATTTGGAAAAACAAGTGCTTCTTCCTCATTCGGGAGGACGAGTCTGTTGATGACTTCAGCTTCAGAAAGTGTGTGGATCATATCCTTCCCCTTCCTGAAAACCTCAAAGGTAGATCTGATGCAAACAAGGCATTCGGCGGTGGCAAGCACCGCGGTGGCAGTGGTGGTGGAGGACGAGGCGGGGGTGGTGGTGGCCGTGGAAGAGGAGGAGGAGGGGGTAGGTGGAGAAACTGATGGTTTTGCTAACTTCTTTTGAGTTTCACCACAATTGGACCCAGTCGTCTTCCTGCAAAGAATTCCCCAGAAAATCCCAACCAATGTCGCCCTTGGCCTTGAGTTCGAGGAATAATTTGTTTAAATGCTTTCTCTTGAATATTATCTAAGATTCTTTATTAATTTTGTAGTTGAATAGTGGTTCCTTTGATTCTTTAATTTAGTGATATTTTTCTTCTTTTAAATTCGGTCGGAGAGATTCAAATTCTAATTTCTTGGTCGAGAACATATGTATAAACCAGTCTCACTGTAACAGGCTAAATCTAGTATTGGCAGATATTGTCTTTT

mRNA sequence

GTCTTTTATTTTCTTAGGGTTTTTACTTTTGAAGTTTTGAAGTTTCAGAGCACACTTGCAAGTTACAATGGCAGAAGAAACAATCCCTCAACCGGCTGACAACAATCAGGAGGTGACCAACGCCGAAGACATGGAATTGGAGAACACAGAGCCCGGAGCAGAGCCGAAAGGATCAAATGATGAAGCAAATGAGGCTGCAAAAGTGACCAATGGCGATGCAAATTCGAAGCGGGAGAGGGACGAAGAAAGCGCCGATGGCAGCGTCGAAGAGGCGAAGAAGCAGAAGATGGAGAAGTCAGTTGAAGAGGGAAGGATTGAGAAGGCGCAAGGAGACGGGAAGGGAGAGGAGGAGCCCGGTCCTGTGACTATAGGCCCTAAGAGCTTTCGATCGTCGAGGGAATTGTTTGATCACTTCTATAAATTCCTCCACCACTGGCCTGCCTACTTGAACGTGAACCAGTACGAGAAGATGATGTTGCTGGATTTGCTGAAGAAGGGGCATGCAGAACCAGAGAAAAAGATAGGGTGTGGTATTCATTCTTTCCAAATTCGAAACCATCCTATTTGGAAAAACAAGTGCTTCTTCCTCATTCGGGAGGACGAGTCTGTTGATGACTTCAGCTTCAGAAAGTGTGTGGATCATATCCTTCCCCTTCCTGAAAACCTCAAAGGTAGATCTGATGCAAACAAGGCATTCGGCGGTGGCAAGCACCGCGGTGGCAGTGGTGGTGGAGGACGAGGCGGGGGTGGTGGTGGCCGTGGAAGAGGAGGAGGAGGGGGTAGGTGGAGAAACTGATGGTTTTGCTAACTTCTTTTGAGTTTCACCACAATTGGACCCAGTCGTCTTCCTGCAAAGAATTCCCCAGAAAATCCCAACCAATGTCGCCCTTGGCCTTGAGTTCGAGGAATAATTTGTTTAAATGCTTTCTCTTGAATATTATCTAAGATTCTTTATTAATTTTGTAGTTGAATAGTGGTTCCTTTGATTCTTTAATTTAGTGATATTTTTCTTCTTTTAAATTCGGTCGGAGAGATTCAAATTCTAATTTCTTGGTCGAGAACATATGTATAAACCAGTCTCACTGTAACAGGCTAAATCTAGTATTGGCAGATATTGTCTTTT

Coding sequence (CDS)

ATGGCAGAAGAAACAATCCCTCAACCGGCTGACAACAATCAGGAGGTGACCAACGCCGAAGACATGGAATTGGAGAACACAGAGCCCGGAGCAGAGCCGAAAGGATCAAATGATGAAGCAAATGAGGCTGCAAAAGTGACCAATGGCGATGCAAATTCGAAGCGGGAGAGGGACGAAGAAAGCGCCGATGGCAGCGTCGAAGAGGCGAAGAAGCAGAAGATGGAGAAGTCAGTTGAAGAGGGAAGGATTGAGAAGGCGCAAGGAGACGGGAAGGGAGAGGAGGAGCCCGGTCCTGTGACTATAGGCCCTAAGAGCTTTCGATCGTCGAGGGAATTGTTTGATCACTTCTATAAATTCCTCCACCACTGGCCTGCCTACTTGAACGTGAACCAGTACGAGAAGATGATGTTGCTGGATTTGCTGAAGAAGGGGCATGCAGAACCAGAGAAAAAGATAGGGTGTGGTATTCATTCTTTCCAAATTCGAAACCATCCTATTTGGAAAAACAAGTGCTTCTTCCTCATTCGGGAGGACGAGTCTGTTGATGACTTCAGCTTCAGAAAGTGTGTGGATCATATCCTTCCCCTTCCTGAAAACCTCAAAGGTAGATCTGATGCAAACAAGGCATTCGGCGGTGGCAAGCACCGCGGTGGCAGTGGTGGTGGAGGACGAGGCGGGGGTGGTGGTGGCCGTGGAAGAGGAGGAGGAGGGGGTAGGTGGAGAAACTGA

Protein sequence

MAEETIPQPADNNQEVTNAEDMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRERDEESADGSVEEAKKQKMEKSVEEGRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFLHHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDESVDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGSGGGGRGGGGGGRGRGGGGGRWRN

Homology

[Close]

BLAST of Cp4.1LG18g07910 vs. ExPASy Swiss-Prot
Match: Q8L557 (Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana OX=3702 GN=EMB514 PE=1 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.1e-42
Identity = 108/213 (50.70%), Postives = 134/213 (62.91%), Query Frame = 0


Query: 21  DMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRERDEESADGSVEEAKKQKMEKSVEE 80
           DME+E   P AE                GD   +RE  EE  +G   E+KKQK+ +    
Sbjct: 22  DMEVETATPKAE---------------TGDEKREREETEEEENGG--ESKKQKVGE---- 81

Query: 81  GRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFLHHWPAYLNVNQYEKMMLLDL 140
                       EE+ GPV +GPK F +S  +FD+F KFLH WP  L+VN+YE M+LLDL
Sbjct: 82  ------------EEKSGPVKLGPKEFVTSVAMFDYFVKFLHFWPTDLDVNKYEHMVLLDL 141

Query: 141 LKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDESVDDFSFRKCVDHILPLPENL 200
           +KKGH+EPEKKIG GI +FQ+R HP+WK++CFFL+RED++ DDFSFRKCVD ILPLPEN+
Sbjct: 142 IKKGHSEPEKKIGGGIKTFQVRTHPMWKSRCFFLVREDDTADDFSFRKCVDQILPLPENM 201

Query: 201 KGRSDANKAFGGGKHRGGSGGGGRGGGGGGRGR 234
           K         GGG+  GG   GGRGGG GGR R
Sbjct: 202 KTPGANGNGHGGGRGGGGGRRGGRGGGRGGRFR 201

[Close]

BLAST of Cp4.1LG18g07910 vs. NCBI nr
Match: XP_023515551.1 (protein EMBRYO DEFECTIVE 514-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 456 bits (1174), Expect = 1.78e-161
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MAEETIPQPADNNQEVTNAEDMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRERDEE 60
           MAEETIPQPADNNQEVTNAEDMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRERDEE
Sbjct: 1   MAEETIPQPADNNQEVTNAEDMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRERDEE 60

Query: 61  SADGSVEEAKKQKMEKSVEEGRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL 120
           SADGSVEEAKKQKMEKSVEEGRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL
Sbjct: 61  SADGSVEEAKKQKMEKSVEEGRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL 120

Query: 121 HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES 180
           HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES
Sbjct: 121 HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES 180

Query: 181 VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGSGGGGRGGGGGGRGRGGGGGRW 240
           VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGSGGGGRGGGGGGRGRGGGGGRW
Sbjct: 181 VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGSGGGGRGGGGGGRGRGGGGGRW 240

Query: 241 RN 242
           RN
Sbjct: 241 RN 242

[Close]

BLAST of Cp4.1LG18g07910 vs. NCBI nr
Match: XP_022921344.1 (protein EMBRYO DEFECTIVE 514-like [Cucurbita moschata])

HSP 1 Score: 441 bits (1133), Expect = 2.95e-155
Identity = 235/242 (97.11%), Postives = 238/242 (98.35%), Query Frame = 0


Query: 1   MAEETIPQPADNNQEVTNAEDMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRERDEE 60
           MAEETIPQPA+NNQEVTNAEDMELENTEP AEPKGSNDEANEAAKVTNGDANSKRER+EE
Sbjct: 1   MAEETIPQPAENNQEVTNAEDMELENTEPVAEPKGSNDEANEAAKVTNGDANSKREREEE 60

Query: 61  SADGSVEEAKKQKMEKSVEEGRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL 120
           SADGSVEE KKQKMEKSVEEGR+EKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL
Sbjct: 61  SADGSVEEVKKQKMEKSVEEGRVEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL 120

Query: 121 HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES 180
           HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES
Sbjct: 121 HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES 180

Query: 181 VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGSGGGGRGGGGGGRGRGGGGGRW 240
           VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGG  GGGRGGGGGGRGRGGGGGRW
Sbjct: 181 VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGG--GGGRGGGGGGRGRGGGGGRW 240

Query: 241 RN 242
           RN
Sbjct: 241 RN 240

[Close]

BLAST of Cp4.1LG18g07910 vs. NCBI nr
Match: KAG7023193.1 (Protein EMBRYO DEFECTIVE, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 439 bits (1129), Expect = 1.24e-154
Identity = 236/243 (97.12%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MAEETIPQPADNNQEVTNAEDMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRERDEE 60
           MAEETIPQPADN+QEVTNAEDMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRER+EE
Sbjct: 1   MAEETIPQPADNDQEVTNAEDMELENTEPGAEPKGSNDEANEAAKVTNGDANSKREREEE 60

Query: 61  SADGSVEEAKKQKMEKSVEEGRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL 120
           SADGSVEE KKQKMEKSVEEGR+EKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL
Sbjct: 61  SADGSVEEVKKQKMEKSVEEGRVEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL 120

Query: 121 HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES 180
           HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES
Sbjct: 121 HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES 180

Query: 181 VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGSGGGGRGGGGGGRGRGGGGG-R 240
           VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGG  GGGRGGGGGGRGRGGGGG R
Sbjct: 181 VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGG--GGGRGGGGGGRGRGGGGGGR 240

Query: 241 WRN 242
           WRN
Sbjct: 241 WRN 241

[Close]

BLAST of Cp4.1LG18g07910 vs. NCBI nr
Match: XP_022987201.1 (protein EMBRYO DEFECTIVE 514-like [Cucurbita maxima])

HSP 1 Score: 438 bits (1126), Expect = 3.83e-154
Identity = 233/246 (94.72%), Postives = 238/246 (96.75%), Query Frame = 0


Query: 1   MAEETIPQPADNNQEVTNAEDMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRERDEE 60
           MAEETIPQPADNNQEVTNAEDMELENTEPGAEPKGSNDEANEA+K+TNGDANSKRER+EE
Sbjct: 1   MAEETIPQPADNNQEVTNAEDMELENTEPGAEPKGSNDEANEASKITNGDANSKREREEE 60

Query: 61  SADGSVEEAKKQKMEKSVEEGRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL 120
           SADGSVEEAKKQKMEKSVEEGR+EKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL
Sbjct: 61  SADGSVEEAKKQKMEKSVEEGRVEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL 120

Query: 121 HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES 180
           HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHP+WKNKCFFLIREDES
Sbjct: 121 HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPMWKNKCFFLIREDES 180

Query: 181 VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGSGGGG----RGGGGGGRGRGGG 240
           VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGG GGGG    RGGGGGGRGRGG 
Sbjct: 181 VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGGGGGGSGGGRGGGGGGRGRGG- 240

Query: 241 GGRWRN 242
             RWRN
Sbjct: 241 --RWRN 243

[Close]

BLAST of Cp4.1LG18g07910 vs. NCBI nr
Match: KAG6589507.1 (Protein EMBRYO DEFECTIVE 514, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 433 bits (1113), Expect = 3.77e-148
Identity = 233/242 (96.28%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   MAEETIPQPADNNQEVTNAEDMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRERDEE 60
           MAEETIPQPADN+QEVTNAEDMELENTEPGAE KGSNDEANEAAKVTNGDANSKRER+EE
Sbjct: 1   MAEETIPQPADNDQEVTNAEDMELENTEPGAESKGSNDEANEAAKVTNGDANSKREREEE 60

Query: 61  SADGSVEEAKKQKMEKSVEEGRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL 120
           SADGSVEE KKQKMEKSVEEGR+EKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL
Sbjct: 61  SADGSVEEVKKQKMEKSVEEGRVEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL 120

Query: 121 HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES 180
           HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES
Sbjct: 121 HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES 180

Query: 181 VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGSGGGGRGGGGGGRGRGGGGGRW 240
           VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGG  GGGRGGGGGGRGRGGGGGR 
Sbjct: 181 VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGG--GGGRGGGGGGRGRGGGGGRT 240

Query: 241 RN 242
            N
Sbjct: 241 DN 240

[Close]

BLAST of Cp4.1LG18g07910 vs. ExPASy TrEMBL
Match: A0A6J1E069 (protein EMBRYO DEFECTIVE 514-like OS=Cucurbita moschata OX=3662 GN=LOC111429642 PE=4 SV=1)

HSP 1 Score: 441 bits (1133), Expect = 1.43e-155
Identity = 235/242 (97.11%), Postives = 238/242 (98.35%), Query Frame = 0


Query: 1   MAEETIPQPADNNQEVTNAEDMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRERDEE 60
           MAEETIPQPA+NNQEVTNAEDMELENTEP AEPKGSNDEANEAAKVTNGDANSKRER+EE
Sbjct: 1   MAEETIPQPAENNQEVTNAEDMELENTEPVAEPKGSNDEANEAAKVTNGDANSKREREEE 60

Query: 61  SADGSVEEAKKQKMEKSVEEGRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL 120
           SADGSVEE KKQKMEKSVEEGR+EKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL
Sbjct: 61  SADGSVEEVKKQKMEKSVEEGRVEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL 120

Query: 121 HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES 180
           HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES
Sbjct: 121 HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES 180

Query: 181 VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGSGGGGRGGGGGGRGRGGGGGRW 240
           VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGG  GGGRGGGGGGRGRGGGGGRW
Sbjct: 181 VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGG--GGGRGGGGGGRGRGGGGGRW 240

Query: 241 RN 242
           RN
Sbjct: 241 RN 240

[Close]

BLAST of Cp4.1LG18g07910 vs. ExPASy TrEMBL
Match: A0A6J1JDH2 (protein EMBRYO DEFECTIVE 514-like OS=Cucurbita maxima OX=3661 GN=LOC111484822 PE=4 SV=1)

HSP 1 Score: 438 bits (1126), Expect = 1.85e-154
Identity = 233/246 (94.72%), Postives = 238/246 (96.75%), Query Frame = 0


Query: 1   MAEETIPQPADNNQEVTNAEDMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRERDEE 60
           MAEETIPQPADNNQEVTNAEDMELENTEPGAEPKGSNDEANEA+K+TNGDANSKRER+EE
Sbjct: 1   MAEETIPQPADNNQEVTNAEDMELENTEPGAEPKGSNDEANEASKITNGDANSKREREEE 60

Query: 61  SADGSVEEAKKQKMEKSVEEGRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL 120
           SADGSVEEAKKQKMEKSVEEGR+EKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL
Sbjct: 61  SADGSVEEAKKQKMEKSVEEGRVEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFL 120

Query: 121 HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDES 180
           HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHP+WKNKCFFLIREDES
Sbjct: 121 HHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPMWKNKCFFLIREDES 180

Query: 181 VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGSGGGG----RGGGGGGRGRGGG 240
           VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGG GGGG    RGGGGGGRGRGG 
Sbjct: 181 VDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGGGGGGSGGGRGGGGGGRGRGG- 240

Query: 241 GGRWRN 242
             RWRN
Sbjct: 241 --RWRN 243

[Close]

BLAST of Cp4.1LG18g07910 vs. ExPASy TrEMBL
Match: A0A6J1C0K4 (protein EMBRYO DEFECTIVE 514 OS=Momordica charantia OX=3673 GN=LOC111007244 PE=4 SV=1)

HSP 1 Score: 321 bits (823), Expect = 2.16e-108
Identity = 179/239 (74.90%), Postives = 208/239 (87.03%), Query Frame = 0


Query: 1   MAEETIPQPADNNQEVTNA--EDMELENTEPGAEPKGSN--DEANEAAKVTNGDANSKRE 60
           MAEET PQ A+N+ EVTN+  EDMELE +EPGAEPKG N   EANEAA  TNGDANSKRE
Sbjct: 1   MAEETTPQLAENDPEVTNSATEDMELETSEPGAEPKGLNGDSEANEAAPETNGDANSKRE 60

Query: 61  RDEESADGSVEEAKKQKMEKSVEEGRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHF 120
           R+EE+AD ++ EAKK K+EKSVEE R+EK +GDGKG+E+ GPV++GPKSF SS E+FD+F
Sbjct: 61  REEETADENIGEAKKPKVEKSVEEERMEKVEGDGKGDEKSGPVSLGPKSFGSSVEMFDYF 120

Query: 121 YKFLHHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIR 180
           YKFLH+WPA LN+N+YE+M+LL+LLKKGH EPEKKIGCGIH+FQIRNHP +K+KC+FLIR
Sbjct: 121 YKFLHYWPANLNLNEYEQMVLLELLKKGHVEPEKKIGCGIHAFQIRNHPTFKSKCYFLIR 180

Query: 181 EDESVDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGSGGGGRGGGGGGRGRGG 235
           EDESVDDFSFRKCVDHILPLPENLK +SDAN+A GG KHRGG    GRGGGGG RGRGG
Sbjct: 181 EDESVDDFSFRKCVDHILPLPENLKVKSDANRALGGCKHRGG----GRGGGGG-RGRGG 234

[Close]

BLAST of Cp4.1LG18g07910 vs. ExPASy TrEMBL
Match: A0A0A0LRN9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009730 PE=4 SV=1)

HSP 1 Score: 309 bits (791), Expect = 1.29e-103
Identity = 185/244 (75.82%), Postives = 199/244 (81.56%), Query Frame = 0


Query: 1   MAEETIPQPADNNQEVTNA--EDMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRERD 60
           MAEETIPQ    + EVTN+  EDMELE TEP A    S  EANEAA V NGDA SKRER 
Sbjct: 1   MAEETIPQL---DPEVTNSGTEDMELETTEPKASTDAS--EANEAAPVINGDATSKRER- 60

Query: 61  EESADGSVEEAKKQKMEKSVEEGRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYK 120
           EESAD  V + KKQK+EKSVEE R+EK  GDGK EEEP PV++GPKSFRSS ELFD+FYK
Sbjct: 61  EESADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYK 120

Query: 121 FLHHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIRED 180
            LHHWP  LNVNQYE+M+L+DLLKKGH EPEKKIGCGIHSFQIR HP WK+KCFFLIRED
Sbjct: 121 ILHHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIRED 180

Query: 181 ESVDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGSGGGGRGGGGGGRGRGGGGG 240
           ES DDFSFRKCVDHILPLPEN KG+ DAN+A GGGKHRGG    GRGGGGG RGRGGGG 
Sbjct: 181 ESADDFSFRKCVDHILPLPENFKGKFDANRALGGGKHRGG----GRGGGGG-RGRGGGG- 232

Query: 241 RWRN 242
           RWRN
Sbjct: 241 RWRN 232

[Close]

BLAST of Cp4.1LG18g07910 vs. ExPASy TrEMBL
Match: A0A6J1F569 (protein EMBRYO DEFECTIVE 514-like OS=Cucurbita moschata OX=3662 GN=LOC111440949 PE=4 SV=1)

HSP 1 Score: 307 bits (786), Expect = 6.49e-103
Identity = 173/244 (70.90%), Postives = 194/244 (79.51%), Query Frame = 0


Query: 1   MAEETIPQPADNNQEVTN--AEDMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRERD 60
           MAEETIPQ A+N  EVTN  AEDMELE+TEP  +  G + +ANEAA VTNGDANSKRER+
Sbjct: 1   MAEETIPQLAENGPEVTNSAAEDMELESTEP--KVSGGDSDANEAAPVTNGDANSKRERE 60

Query: 61  EESADGSVEEAKKQKMEKSVEEGRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYK 120
           EE AD    EAKK K+EKSVEE R+EK + DGKGEEE GPV++GPKSF SS ELFD+FY 
Sbjct: 61  EEGADDHAGEAKKPKVEKSVEEERLEKVERDGKGEEEHGPVSLGPKSFGSSVELFDYFYN 120

Query: 121 FLHHWPAYLNVNQYEKMMLLDLLKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIRED 180
           FLH+WPA LNVNQYE M+LLDL+KKGH EP+KKIGCG+ + QIR HP+WK+KCFFLIRED
Sbjct: 121 FLHYWPANLNVNQYELMVLLDLIKKGHVEPDKKIGCGVRACQIRYHPMWKSKCFFLIRED 180

Query: 181 ESVDDFSFRKCVDHILPLPENLKGRSDANKAFGGGKHRGGSGGGGRGGGGGGRGRGGGGG 240
            S DDFSFRKCVDHILPLPENLK  SDAN+A GGGKHRGG    GRGGGG          
Sbjct: 181 GSADDFSFRKCVDHILPLPENLKTISDANRALGGGKHRGG----GRGGGG---------- 228

Query: 241 RWRN 242
           RWRN
Sbjct: 241 RWRN 228

[Close]

BLAST of Cp4.1LG18g07910 vs. TAIR 10
Match: AT5G62440.1 (Protein of unknown function (DUF3223) )

HSP 1 Score: 174.9 bits (442), Expect = 8.0e-44
Identity = 108/213 (50.70%), Postives = 134/213 (62.91%), Query Frame = 0


Query: 21  DMELENTEPGAEPKGSNDEANEAAKVTNGDANSKRERDEESADGSVEEAKKQKMEKSVEE 80
           DME+E   P AE                GD   +RE  EE  +G   E+KKQK+ +    
Sbjct: 22  DMEVETATPKAE---------------TGDEKREREETEEEENGG--ESKKQKVGE---- 81

Query: 81  GRIEKAQGDGKGEEEPGPVTIGPKSFRSSRELFDHFYKFLHHWPAYLNVNQYEKMMLLDL 140
                       EE+ GPV +GPK F +S  +FD+F KFLH WP  L+VN+YE M+LLDL
Sbjct: 82  ------------EEKSGPVKLGPKEFVTSVAMFDYFVKFLHFWPTDLDVNKYEHMVLLDL 141

Query: 141 LKKGHAEPEKKIGCGIHSFQIRNHPIWKNKCFFLIREDESVDDFSFRKCVDHILPLPENL 200
           +KKGH+EPEKKIG GI +FQ+R HP+WK++CFFL+RED++ DDFSFRKCVD ILPLPEN+
Sbjct: 142 IKKGHSEPEKKIGGGIKTFQVRTHPMWKSRCFFLVREDDTADDFSFRKCVDQILPLPENM 201

Query: 201 KGRSDANKAFGGGKHRGGSGGGGRGGGGGGRGR 234
           K         GGG+  GG   GGRGGG GGR R
Sbjct: 202 KTPGANGNGHGGGRGGGGGRRGGRGGGRGGRFR 201

[Close]

BLAST of Cp4.1LG18g07910 vs. TAIR 10
Match: AT1G45230.1 (Protein of unknown function (DUF3223) )

HSP 1 Score: 42.7 bits (99), Expect = 4.8e-04
Identity = 41/166 (24.70%), Postives = 80/166 (48.19%), Query Frame = 0


Query: 33  PKGSNDEANEAAKVTNGDANSKRERDEESADGSVEEAKKQKMEKSVEEGRIEKAQGDGKG 92
           P+G +       +    +++  +  + ES    +    +   E+S EE   E+ + + +G
Sbjct: 36  PRGDSTSLRPRVRALRTESDGAKIGNSESYGSELLRRPRIASEESSEEEE-EEEEENSEG 95

Query: 93  EEEPGPVTIGPKSFRSSRELFDHFYKFLHHWPAYLN---VNQYEKMMLLDLLKKGHAEPE 152
           +E    V    K    +  L   F + + H   Y N   ++   +  ++++L   H E E
Sbjct: 96  DEF---VDWEDKILEVTVPLVG-FVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECE 155

Query: 153 KKIGCGIHSFQIRNHPIWK-NKCFFLIREDESVDDFSFRKCVDHIL 195
           KKIGCGI    + +HP ++ ++C F++R+D  V DFS+ KC+  ++
Sbjct: 156 KKIGCGIDYIMVGHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLI 196

[Close]

BLAST of Cp4.1LG18g07910 vs. TAIR 10
Match: AT1G45230.2 (Protein of unknown function (DUF3223) )

HSP 1 Score: 42.4 bits (98), Expect = 6.2e-04
Identity = 41/166 (24.70%), Postives = 80/166 (48.19%), Query Frame = 0


Query: 33  PKGSNDEANEAAKVTNGDANSKRERDEESADGSVEEAKKQKMEKSVEEGRIEKAQGDGKG 92
           P+G +       +    +++  +  + ES    +    +   E+S EE   E+ + + +G
Sbjct: 36  PRGDSTSLRPRVRALRTESDGAKIGNSESYGSELLRRPRIASEESSEEEE-EEEEENSEG 95

Query: 93  EEEPGPVTIGPKSFRSSRELFDHFYKFLHHWPAYLN---VNQYEKMMLLDLLKKGHAEPE 152
           +E    V    K    +  L   F + + H   Y N   ++   +  ++++L   H E E
Sbjct: 96  DEF---VDWEDKILEVTVPLVG-FVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPECE 155

Query: 153 KKIGCGIHSFQIRNHPIWK-NKCFFLIREDESVDDFSFRKCVDHIL 195
           KKIGCGI    + +HP ++ ++C F++R+D  V DFS+ KC+  ++
Sbjct: 156 KKIGCGIDYIMVWHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLI 196

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g07910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L557	1.1e-42	50.70	Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana OX=3702 GN=EMB514 PE=1 SV=1	[more]

BLAST of Cp4.1LG18g07910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515551.1	1.78e-161	100.00	protein EMBRYO DEFECTIVE 514-like [Cucurbita pepo subsp. pepo]	[more]
XP_022921344.1	2.95e-155	97.11	protein EMBRYO DEFECTIVE 514-like [Cucurbita moschata]	[more]
KAG7023193.1	1.24e-154	97.12	Protein EMBRYO DEFECTIVE, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022987201.1	3.83e-154	94.72	protein EMBRYO DEFECTIVE 514-like [Cucurbita maxima]	[more]
KAG6589507.1	3.77e-148	96.28	Protein EMBRYO DEFECTIVE 514, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG18g07910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E069	1.43e-155	97.11	protein EMBRYO DEFECTIVE 514-like OS=Cucurbita moschata OX=3662 GN=LOC111429642 ...	[more]
A0A6J1JDH2	1.85e-154	94.72	protein EMBRYO DEFECTIVE 514-like OS=Cucurbita maxima OX=3661 GN=LOC111484822 PE...	[more]
A0A6J1C0K4	2.16e-108	74.90	protein EMBRYO DEFECTIVE 514 OS=Momordica charantia OX=3673 GN=LOC111007244 PE=4...	[more]
A0A0A0LRN9	1.29e-103	75.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009730 PE=4 SV=1	[more]
A0A6J1F569	6.49e-103	70.90	protein EMBRYO DEFECTIVE 514-like OS=Cucurbita moschata OX=3662 GN=LOC111440949 ...	[more]

BLAST of Cp4.1LG18g07910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62440.1	8.0e-44	50.70	Protein of unknown function (DUF3223)	[more]
AT1G45230.1	4.8e-04	24.70	Protein of unknown function (DUF3223)	[more]
AT1G45230.2	6.2e-04	24.70	Protein of unknown function (DUF3223)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF11523	DUF3223	coord: 118..190 e-value: 1.9E-23 score: 82.9
None	No IPR available	GENE3D	3.10.450.40		coord: 95..193 e-value: 2.9E-26 score: 93.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..92
None	No IPR available	PANTHER	PTHR33415:SF12	PROTEIN EMBRYO DEFECTIVE 514	coord: 12..227
IPR044673	Protein DCL-like	PANTHER	PTHR33415	FAMILY NOT NAMED	coord: 12..227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g07910.1	Cp4.1LG18g07910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017126	nucleologenesis
cellular_component	GO:0005634	nucleus