Cp4.1LG18g07140 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g07140
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	transcription factor TCP5-like
Location	Cp4.1LG18: 7003353 .. 7004294 (+)
RNA-Seq Expression	Cp4.1LG18g07140
Synteny	Cp4.1LG18g07140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAGAAACTCAAAAGAAAAGGGTTTTGAATCAAAAGAAGAAGGAAAATATAGGTTCCCCAAGGCTCCAACAAGCTCTAGGCAATGGTCAGGGTTTAGAAACCCAAGAATTGTGAGAGTTTCTCGTTCATTTGGTGGCAAAGATAGACATAGCAAAGTTTGTACCATTAGGGGCTTGAGAGATAGAAGGATAAGGCTATCAGTCCCTACCGCCATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATTGACTGGCTCCTCGACGTCACCAAGCTCGATATCGACAAGCTCCCACCGTTGCAGATCCCAACCGGGTTCTCTCCGTTTCACCAACAGATGCTTTTCCCTCCATATGATCATCATCATCATTATTATTCTTCTTCTTCTTCTTCTTCTTCTTCCCAATTTTGTAACTCGCTCCCTCTGCCCTTCGCCGTCGACGTGAAAGGCGATTCTACGGCGATCGAGAAAACGAAGATTTGGGATATGGATTTAGCGTTACAAGGAAAAGCTTCTTCATTAACTAAAGGGAAGTGGGTTGATGGAAGTAGTAATCAACATGTAGAAGATTACAATTTTACACCTTACAATACTTACAATTCTTCTCAATTTGGGAACAATAATGGAGTTTTTCCATCACAAATTGAGGCTCCAACGAGTTCATCATCTGCTTCTGCACTCTTCTTTACACCCTATGCTTCATATATTACAAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATCCCCATGCTTTGTCCAATCCCTTTGTGCCTTCAGCTCTCCACCCTTTTGCTTCACAGAACTTGAAACCCTTTTCAGCTGCAAGCTTCAACTTCAAGCAGCTTCTTCATGCAGCTGACGGTAATGGCGCCGACCGCTCCAATAAAGATGGGGCGGCTGGTGACTCATAG

mRNA sequence

ATGTTGAGAAACTCAAAAGAAAAGGGTTTTGAATCAAAAGAAGAAGGAAAATATAGGTTCCCCAAGGCTCCAACAAGCTCTAGGCAATGGTCAGGGTTTAGAAACCCAAGAATTGTGAGAGTTTCTCGTTCATTTGGTGGCAAAGATAGACATAGCAAAGTTTGTACCATTAGGGGCTTGAGAGATAGAAGGATAAGGCTATCAGTCCCTACCGCCATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATTGACTGGCTCCTCGACGTCACCAAGCTCGATATCGACAAGCTCCCACCGTTGCAGATCCCAACCGGGTTCTCTCCGTTTCACCAACAGATGCTTTTCCCTCCATATGATCATCATCATCATTATTATTCTTCTTCTTCTTCTTCTTCTTCTTCCCAATTTTGTAACTCGCTCCCTCTGCCCTTCGCCGTCGACGTGAAAGGCGATTCTACGGCGATCGAGAAAACGAAGATTTGGGATATGGATTTAGCGTTACAAGGAAAAGCTTCTTCATTAACTAAAGGGAAGTGGGTTGATGGAAGTAGTAATCAACATGTAGAAGATTACAATTTTACACCTTACAATACTTACAATTCTTCTCAATTTGGGAACAATAATGGAGTTTTTCCATCACAAATTGAGGCTCCAACGAGTTCATCATCTGCTTCTGCACTCTTCTTTACACCCTATGCTTCATATATTACAAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATCCCCATGCTTTGTCCAATCCCTTTGTGCCTTCAGCTCTCCACCCTTTTGCTTCACAGAACTTGAAACCCTTTTCAGCTGCAAGCTTCAACTTCAAGCAGCTTCTTCATGCAGCTGACGGTAATGGCGCCGACCGCTCCAATAAAGATGGGGCGGCTGGTGACTCATAG

Coding sequence (CDS)

ATGTTGAGAAACTCAAAAGAAAAGGGTTTTGAATCAAAAGAAGAAGGAAAATATAGGTTCCCCAAGGCTCCAACAAGCTCTAGGCAATGGTCAGGGTTTAGAAACCCAAGAATTGTGAGAGTTTCTCGTTCATTTGGTGGCAAAGATAGACATAGCAAAGTTTGTACCATTAGGGGCTTGAGAGATAGAAGGATAAGGCTATCAGTCCCTACCGCCATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGCCAACCTAGTAAGGTCATTGACTGGCTCCTCGACGTCACCAAGCTCGATATCGACAAGCTCCCACCGTTGCAGATCCCAACCGGGTTCTCTCCGTTTCACCAACAGATGCTTTTCCCTCCATATGATCATCATCATCATTATTATTCTTCTTCTTCTTCTTCTTCTTCTTCCCAATTTTGTAACTCGCTCCCTCTGCCCTTCGCCGTCGACGTGAAAGGCGATTCTACGGCGATCGAGAAAACGAAGATTTGGGATATGGATTTAGCGTTACAAGGAAAAGCTTCTTCATTAACTAAAGGGAAGTGGGTTGATGGAAGTAGTAATCAACATGTAGAAGATTACAATTTTACACCTTACAATACTTACAATTCTTCTCAATTTGGGAACAATAATGGAGTTTTTCCATCACAAATTGAGGCTCCAACGAGTTCATCATCTGCTTCTGCACTCTTCTTTACACCCTATGCTTCATATATTACAAACCCATTTGAAAGCCATATCCATTTCTTGAGCTCAAATCCCCATGCTTTGTCCAATCCCTTTGTGCCTTCAGCTCTCCACCCTTTTGCTTCACAGAACTTGAAACCCTTTTCAGCTGCAAGCTTCAACTTCAAGCAGCTTCTTCATGCAGCTGACGGTAATGGCGCCGACCGCTCCAATAAAGATGGGGCGGCTGGTGACTCATAG

Protein sequence

MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYYSSSSSSSSSQFCNSLPLPFAVDVKGDSTAIEKTKIWDMDLALQGKASSLTKGKWVDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIHFLSSNPHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGAAGDS

Homology

[Close]

BLAST of Cp4.1LG18g07140 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 5.6e-42
Identity = 120/274 (43.80%), Postives = 158/274 (57.66%), Query Frame = 0


Query: 21  PKAPTSSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQ 80
           P + +SSRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQ
Sbjct: 36  PSSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQ 95

Query: 81  DKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYYSSSSSS 140
           D+L L QPSKVIDWLL+  K D+DKLPPLQ P GF+  +  ++F      +  +  S SS
Sbjct: 96  DRLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIF-----GNSGFGESPSS 155

Query: 141 SSSQFCNSLPLPFAVDVKGDSTAIEKTKIWDMDLALQGKASSLTKGKWV--DGSSNQHVE 200
           ++S       L F  +     ++  + ++ D     Q ++  L KGKW+  D +SNQ  +
Sbjct: 156 TTSTTFPGTNLGFLENWDLGGSSRTRARLTD-TTTTQRESFDLDKGKWIKNDENSNQDHQ 215

Query: 201 DYN------FTPYNTYNSS--------------QFGNNNGVFPSQIEA---------PTS 260
            +N      F   N YN++              Q GNN  V  S + A         P S
Sbjct: 216 GFNTNHQQQFPLTNPYNNTSAYYNLGHLQQSLDQSGNNVTVAISNVAANNNNNLNLHPPS 275

[Close]

BLAST of Cp4.1LG18g07140 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.9e-32
Identity = 72/113 (63.72%), Postives = 84/113 (74.34%), Query Frame = 0


Query: 16  GKYRFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPT 75
           GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPT
Sbjct: 39  GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPT 98

Query: 76  AIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQI-PTGFSPFHQQMLF 124
           AIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPL I P  FS F+    F
Sbjct: 99  AIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSF 151

[Close]

BLAST of Cp4.1LG18g07140 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.4e-31
Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 33  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 92
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 93  WLLDVTKLDIDKLPPLQIPTGF 115
           WLL+V K D+D LPPLQ P GF
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGF 100

[Close]

BLAST of Cp4.1LG18g07140 vs. ExPASy Swiss-Prot
Match: A2XMN1 (Transcription factor PCF6 OS=Oryza sativa subsp. indica OX=39946 GN=PCF6 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.1e-17
Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 31  SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKV 90
           +G    RI RV R+ GGKDRHSKV T +G+RDRR+RLSV TAIQ YDLQD+L   QPSK 
Sbjct: 37  TGSTASRIYRV-RATGGKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGFDQPSKA 96

Query: 91  IDWLLDVTKLDIDKLPPLQIPTGFS 116
           I+WL++     ID LP L  P  F+
Sbjct: 97  IEWLINAASPAIDTLPSLD-PAAFA 119

[Close]

BLAST of Cp4.1LG18g07140 vs. ExPASy Swiss-Prot
Match: Q10CE8 (Transcription factor PCF6 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF6 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 2.1e-17
Identity = 49/85 (57.65%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 31  SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKV 90
           +G    RI RV R+ GGKDRHSKV T +G+RDRR+RLSV TAIQ YDLQD+L   QPSK 
Sbjct: 37  TGSTASRIYRV-RATGGKDRHSKVYTAKGIRDRRVRLSVATAIQFYDLQDRLGFDQPSKA 96

Query: 91  IDWLLDVTKLDIDKLPPLQIPTGFS 116
           I+WL++     ID LP L  P  F+
Sbjct: 97  IEWLINAASPAIDTLPSLD-PAAFA 119

[Close]

BLAST of Cp4.1LG18g07140 vs. NCBI nr
Match: XP_023516672.1 (transcription factor TCP5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 625 bits (1612), Expect = 7.34e-226
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120

Query: 121 MLFPPYDHHHHYYSSSSSSSSSQFCNSLPLPFAVDVKGDSTAIEKTKIWDMDLALQGKAS 180
           MLFPPYDHHHHYYSSSSSSSSSQFCNSLPLPFAVDVKGDSTAIEKTKIWDMDLALQGKAS
Sbjct: 121 MLFPPYDHHHHYYSSSSSSSSSQFCNSLPLPFAVDVKGDSTAIEKTKIWDMDLALQGKAS 180

Query: 181 SLTKGKWVDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPY 240
           SLTKGKWVDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPY
Sbjct: 181 SLTKGKWVDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPY 240

Query: 241 ASYITNPFESHIHFLSSNPHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNG 300
           ASYITNPFESHIHFLSSNPHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNG
Sbjct: 241 ASYITNPFESHIHFLSSNPHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNG 300

Query: 301 ADRSNKDGAAGDS 313
           ADRSNKDGAAGDS
Sbjct: 301 ADRSNKDGAAGDS 313

[Close]

BLAST of Cp4.1LG18g07140 vs. NCBI nr
Match: KAG7023291.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 602 bits (1553), Expect = 6.97e-217
Identity = 306/314 (97.45%), Postives = 308/314 (98.09%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120

Query: 121 MLFPPYDHHHHYYSSSSSSSSS-QFCNSLPLPFAVDVKGDSTAIEKTKIWDMDLALQGKA 180
           MLFPPYDHHHHY SSSSSSSSS QFCNSLPLPFAVD+KGDS  IEKTKIWDMDLALQGKA
Sbjct: 121 MLFPPYDHHHHYSSSSSSSSSSSQFCNSLPLPFAVDMKGDS--IEKTKIWDMDLALQGKA 180

Query: 181 SSLTKGKWVDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP 240
           SSLTKGKW+DGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP
Sbjct: 181 SSLTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP 240

Query: 241 YASYITNPFESHIHFLSSNPHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN 300
           YASYITNPFESHIHFLSSN HALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN
Sbjct: 241 YASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN 300

Query: 301 GADRSNKDGAAGDS 313
           GADRSNKDG AGDS
Sbjct: 301 GADRSNKDGTAGDS 312

[Close]

BLAST of Cp4.1LG18g07140 vs. NCBI nr
Match: KAG6589600.1 (Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 599 bits (1545), Expect = 1.11e-215
Identity = 303/313 (96.81%), Postives = 305/313 (97.44%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120

Query: 121 MLFPPYDHHHHYYSSSSSSSSSQFCNSLPLPFAVDVKGDSTAIEKTKIWDMDLALQGKAS 180
           MLFPPYDHHHHY SSSSSSSSSQFCNSLP PFAVD+KGDS  IEKTKIWDMDLALQGKAS
Sbjct: 121 MLFPPYDHHHHYSSSSSSSSSSQFCNSLPPPFAVDMKGDS--IEKTKIWDMDLALQGKAS 180

Query: 181 SLTKGKWVDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPY 240
           SLTKGKW+DGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPY
Sbjct: 181 SLTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPY 240

Query: 241 ASYITNPFESHIHFLSSNPHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNG 300
           ASYITNPFESHIHFLSSN HALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAAD NG
Sbjct: 241 ASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADANG 300

Query: 301 ADRSNKDGAAGDS 313
           AD SNKDG AGDS
Sbjct: 301 ADPSNKDGTAGDS 311

[Close]

BLAST of Cp4.1LG18g07140 vs. NCBI nr
Match: XP_022921970.1 (transcription factor TCP5-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 595 bits (1535), Expect = 3.86e-214
Identity = 303/314 (96.50%), Postives = 305/314 (97.13%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWL DVTKLDIDKLPPLQIPTGFSPFHQQ
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQ 120

Query: 121 MLFPPYDHHHHYYSSSSSSSSS-QFCNSLPLPFAVDVKGDSTAIEKTKIWDMDLALQGKA 180
           MLFPPYDHHHHY SSSSSSSSS QFCNSLP PFAVD+KGDS  IEKTKIWDMDLALQGKA
Sbjct: 121 MLFPPYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDS--IEKTKIWDMDLALQGKA 180

Query: 181 SSLTKGKWVDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP 240
           SSLTKGKW+DGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP
Sbjct: 181 SSLTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP 240

Query: 241 YASYITNPFESHIHFLSSNPHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN 300
           YASYITNPFESHIHFLSSN HALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN
Sbjct: 241 YASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN 300

Query: 301 GADRSNKDGAAGDS 313
           G DRSNKDG AGDS
Sbjct: 301 GTDRSNKDGTAGDS 312

[Close]

BLAST of Cp4.1LG18g07140 vs. NCBI nr
Match: XP_022987421.1 (transcription factor TCP5-like [Cucurbita maxima])

HSP 1 Score: 588 bits (1517), Expect = 2.31e-211
Identity = 300/317 (94.64%), Postives = 306/317 (96.53%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSS QWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSSQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120

Query: 121 MLFPPYD--HHHHYYSSSSSSSSSQFCNSLPLPFAVDVKGDS--TAIEKTKIWDMDLALQ 180
           M FPPYD  HHHH++SSSSSS   QFCNSLP PFAV+VKGDS  TA+EKTKIWDMDLALQ
Sbjct: 121 MFFPPYDDQHHHHHHSSSSSS---QFCNSLPPPFAVNVKGDSSSTAVEKTKIWDMDLALQ 180

Query: 181 GKASSLTKGKWVDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALF 240
           GKASSLTKGKW+DGSSNQHVEDYNFTPYN+YNSSQFGNNNGVFPSQIEAPTSSSSASALF
Sbjct: 181 GKASSLTKGKWIDGSSNQHVEDYNFTPYNSYNSSQFGNNNGVFPSQIEAPTSSSSASALF 240

Query: 241 FTPYASYITNPFESHIHFLSSNPHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAA 300
           FTPYASYITNPFESHIHFLSSN HALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAA
Sbjct: 241 FTPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAA 300

Query: 301 DGNGADRSNKDGAAGDS 313
           DGNGADRSNKDGAAGDS
Sbjct: 301 DGNGADRSNKDGAAGDS 314

[Close]

BLAST of Cp4.1LG18g07140 vs. ExPASy TrEMBL
Match: A0A6J1E797 (transcription factor TCP5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430066 PE=4 SV=1)

HSP 1 Score: 595 bits (1535), Expect = 1.87e-214
Identity = 303/314 (96.50%), Postives = 305/314 (97.13%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWL DVTKLDIDKLPPLQIPTGFSPFHQQ
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQ 120

Query: 121 MLFPPYDHHHHYYSSSSSSSSS-QFCNSLPLPFAVDVKGDSTAIEKTKIWDMDLALQGKA 180
           MLFPPYDHHHHY SSSSSSSSS QFCNSLP PFAVD+KGDS  IEKTKIWDMDLALQGKA
Sbjct: 121 MLFPPYDHHHHYSSSSSSSSSSSQFCNSLPPPFAVDMKGDS--IEKTKIWDMDLALQGKA 180

Query: 181 SSLTKGKWVDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP 240
           SSLTKGKW+DGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP
Sbjct: 181 SSLTKGKWIDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTP 240

Query: 241 YASYITNPFESHIHFLSSNPHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN 300
           YASYITNPFESHIHFLSSN HALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN
Sbjct: 241 YASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGN 300

Query: 301 GADRSNKDGAAGDS 313
           G DRSNKDG AGDS
Sbjct: 301 GTDRSNKDGTAGDS 312

[Close]

BLAST of Cp4.1LG18g07140 vs. ExPASy TrEMBL
Match: A0A6J1JE53 (transcription factor TCP5-like OS=Cucurbita maxima OX=3661 GN=LOC111484971 PE=4 SV=1)

HSP 1 Score: 588 bits (1517), Expect = 1.12e-211
Identity = 300/317 (94.64%), Postives = 306/317 (96.53%), Query Frame = 0


Query: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60
           MLRNSKEKGFESKEEGKYRFPKAPTSS QWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL
Sbjct: 1   MLRNSKEKGFESKEEGKYRFPKAPTSSSQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGL 60

Query: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120
           RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ
Sbjct: 61  RDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQ 120

Query: 121 MLFPPYD--HHHHYYSSSSSSSSSQFCNSLPLPFAVDVKGDS--TAIEKTKIWDMDLALQ 180
           M FPPYD  HHHH++SSSSSS   QFCNSLP PFAV+VKGDS  TA+EKTKIWDMDLALQ
Sbjct: 121 MFFPPYDDQHHHHHHSSSSSS---QFCNSLPPPFAVNVKGDSSSTAVEKTKIWDMDLALQ 180

Query: 181 GKASSLTKGKWVDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALF 240
           GKASSLTKGKW+DGSSNQHVEDYNFTPYN+YNSSQFGNNNGVFPSQIEAPTSSSSASALF
Sbjct: 181 GKASSLTKGKWIDGSSNQHVEDYNFTPYNSYNSSQFGNNNGVFPSQIEAPTSSSSASALF 240

Query: 241 FTPYASYITNPFESHIHFLSSNPHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAA 300
           FTPYASYITNPFESHIHFLSSN HALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAA
Sbjct: 241 FTPYASYITNPFESHIHFLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAA 300

Query: 301 DGNGADRSNKDGAAGDS 313
           DGNGADRSNKDGAAGDS
Sbjct: 301 DGNGADRSNKDGAAGDS 314

[Close]

BLAST of Cp4.1LG18g07140 vs. ExPASy TrEMBL
Match: A0A6J1E2U7 (transcription factor TCP5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430066 PE=4 SV=1)

HSP 1 Score: 568 bits (1465), Expect = 5.59e-204
Identity = 288/300 (96.00%), Postives = 291/300 (97.00%), Query Frame = 0


Query: 15  EGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQ 74
           +GKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQ
Sbjct: 3   KGKYRFPKAPTSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQ 62

Query: 75  LYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYYS 134
           LYDLQDKLKLGQPSKVIDWL DVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHY S
Sbjct: 63  LYDLQDKLKLGQPSKVIDWLPDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYSS 122

Query: 135 SSSSSSSS-QFCNSLPLPFAVDVKGDSTAIEKTKIWDMDLALQGKASSLTKGKWVDGSSN 194
           SSSSSSSS QFCNSLP PFAVD+KGDS  IEKTKIWDMDLALQGKASSLTKGKW+DGSSN
Sbjct: 123 SSSSSSSSSQFCNSLPPPFAVDMKGDS--IEKTKIWDMDLALQGKASSLTKGKWIDGSSN 182

Query: 195 QHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIH 254
           QHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIH
Sbjct: 183 QHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSSSSASALFFTPYASYITNPFESHIH 242

Query: 255 FLSSNPHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGADRSNKDGAAGDS 313
           FLSSN HALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNG DRSNKDG AGDS
Sbjct: 243 FLSSNSHALSNPFVPSALHPFASQNLKPFSAASFNFKQLLHAADGNGTDRSNKDGTAGDS 300

[Close]

BLAST of Cp4.1LG18g07140 vs. ExPASy TrEMBL
Match: A0A0A0LRU6 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV=1)

HSP 1 Score: 427 bits (1097), Expect = 2.67e-146
Identity = 263/408 (64.46%), Postives = 279/408 (68.38%), Query Frame = 0


Query: 1   MLRNSK--EKGFESKEEG-------------KYRFPKAPTSS-RQWSGFRNPRIVRVSRS 60
           MLRN+   +KG E+KEEG             KY FPKAPTSS RQWSGFRNPRIVRVSRS
Sbjct: 1   MLRNNSKDQKGCEAKEEGVLVRSSSNNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSRS 60

Query: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDK 120
           FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 
Sbjct: 61  FGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDN 120

Query: 121 LPPLQIPTGFSPFHQQMLFPPY-DHHHHYY-----SSSSSSSSSQFCNSLPLPFAVDVKG 180
           LPPLQIP GFSPFHQQMLFP Y D HHHYY     SSSSSSSSS+FCNSLP PF +DVK 
Sbjct: 121 LPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKS 180

Query: 181 DST-----AIEKTKIWDMDLA-LQGKASSLT------KGKWVDGSSN-----QHVEDYN- 240
                    +EKTK+WDMDLA LQ KA S T      KGKW+DGS+N     Q VEDYN 
Sbjct: 181 TDAYQTTMTVEKTKLWDMDLAVLQDKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNE 240

Query: 241 -------------------------FTPYNTYNSS---------------QFGNNN---G 300
                                     TPYN YNSS               QFGNNN   G
Sbjct: 241 QISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHNHRQQPSCLSLSQFGNNNNSNG 300

Query: 301 VFPSQI-----EAPTSSSSASALFFTPYASYITNPFESHIHFLSSNPHALSNPFVPSALH 313
           VFPSQ+     +   SSSS+S+LFFTPYASYITNPFESHIHFLSSN HALSNPF+ S+LH
Sbjct: 301 VFPSQLVETAAQGSNSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNPFMSSSLH 360

[Close]

BLAST of Cp4.1LG18g07140 vs. ExPASy TrEMBL
Match: A0A5A7UWW8 (Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003030 PE=4 SV=1)

HSP 1 Score: 422 bits (1084), Expect = 2.43e-144
Identity = 257/407 (63.14%), Postives = 279/407 (68.55%), Query Frame = 0


Query: 1   MLRNSK---EKGFESKEEG-------------KYRFPKAPTSS-RQWSGFRNPRIVRVSR 60
           MLRNS    +KG E+KEEG             KY FPKAPTSS RQWSGFRNPRIVRVSR
Sbjct: 1   MLRNSNSKDQKGSEAKEEGISIRSSSSNNNDGKYSFPKAPTSSSRQWSGFRNPRIVRVSR 60

Query: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120
           SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID
Sbjct: 61  SFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDID 120

Query: 121 KLPPLQIPTGFSPFHQQMLFPPY-DHHHHYYSSSSSSSSSQFCNSLPLPFAVDVKGDST- 180
            LPPLQIP GFSPFHQQMLFP Y D HHHYY+SSSSSSSS+FCNS P PF +DVK     
Sbjct: 121 NLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSRFCNSQPPPFMLDVKSTDAY 180

Query: 181 ----AIEKTKIWDMDLALQGK-------ASSLTKGKWVDGSSN-----QHVEDYN----- 240
                +EKTK+WDMDLA+  +       A++ TKGKW+DGS+N     Q VEDYN     
Sbjct: 181 QTTMTVEKTKLWDMDLAVLPEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNEQISS 240

Query: 241 ---------------------FTPYNTYNSS----------------QFGNNN---GVFP 300
                                 TPYN YNSS                QFGNNN   G+FP
Sbjct: 241 QKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHHRQQPSCLSLSQFGNNNNSNGIFP 300

Query: 301 SQI-----EAPTSSSSASALFFTPYASYITNPFESHIHFLSSNPHALSN-PFVPSALHPF 313
           SQ+      + +SSSS+S+LFFTPYASYITNPFESHIHFLSSN HALSN PF+ S+LHPF
Sbjct: 301 SQLVEAAQASTSSSSSSSSLFFTPYASYITNPFESHIHFLSSNSHALSNNPFMSSSLHPF 360

[Close]

BLAST of Cp4.1LG18g07140 vs. TAIR 10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 )

HSP 1 Score: 172.9 bits (437), Expect = 3.9e-43
Identity = 120/274 (43.80%), Postives = 158/274 (57.66%), Query Frame = 0


Query: 21  PKAPTSSRQW-SGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQ 80
           P + +SSRQW S FRNPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSVPTAIQLYDLQ
Sbjct: 36  PSSVSSSRQWTSAFRNPRIVRVSRTFGGKDRHSKVCTVRGLRDRRIRLSVPTAIQLYDLQ 95

Query: 81  DKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQMLFPPYDHHHHYYSSSSSS 140
           D+L L QPSKVIDWLL+  K D+DKLPPLQ P GF+  +  ++F      +  +  S SS
Sbjct: 96  DRLGLSQPSKVIDWLLEAAKDDVDKLPPLQFPHGFNQMYPNLIF-----GNSGFGESPSS 155

Query: 141 SSSQFCNSLPLPFAVDVKGDSTAIEKTKIWDMDLALQGKASSLTKGKWV--DGSSNQHVE 200
           ++S       L F  +     ++  + ++ D     Q ++  L KGKW+  D +SNQ  +
Sbjct: 156 TTSTTFPGTNLGFLENWDLGGSSRTRARLTD-TTTTQRESFDLDKGKWIKNDENSNQDHQ 215

Query: 201 DYN------FTPYNTYNSS--------------QFGNNNGVFPSQIEA---------PTS 260
            +N      F   N YN++              Q GNN  V  S + A         P S
Sbjct: 216 GFNTNHQQQFPLTNPYNNTSAYYNLGHLQQSLDQSGNNVTVAISNVAANNNNNLNLHPPS 275

[Close]

BLAST of Cp4.1LG18g07140 vs. TAIR 10
Match: AT3G02150.1 (plastid transcription factor 1 )

HSP 1 Score: 139.0 bits (349), Expect = 6.3e-33
Identity = 72/113 (63.72%), Postives = 84/113 (74.34%), Query Frame = 0


Query: 16  GKYRFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPT 75
           GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPT
Sbjct: 39  GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPT 98

Query: 76  AIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQI-PTGFSPFHQQMLF 124
           AIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPL I P  FS F+    F
Sbjct: 99  AIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSF 151

[Close]

BLAST of Cp4.1LG18g07140 vs. TAIR 10
Match: AT3G02150.2 (plastid transcription factor 1 )

HSP 1 Score: 139.0 bits (349), Expect = 6.3e-33
Identity = 72/113 (63.72%), Postives = 84/113 (74.34%), Query Frame = 0


Query: 16  GKYRFPKAPT----SSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPT 75
           GK    K PT    SS  W   ++PRIVRVSR+FGGKDRHSKVCT+RGLRDRR+RLSVPT
Sbjct: 39  GKTVIKKQPTSISSSSSSWMKSKDPRIVRVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPT 98

Query: 76  AIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQI-PTGFSPFHQQMLF 124
           AIQLYDLQ++L + QPSK +DWLLD  K +ID+LPPL I P  FS F+    F
Sbjct: 99  AIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDELPPLPISPENFSIFNHHQSF 151

[Close]

BLAST of Cp4.1LG18g07140 vs. TAIR 10
Match: AT5G08070.1 (TCP domain protein 17 )

HSP 1 Score: 137.1 bits (344), Expect = 2.4e-32
Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 33  FRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVID 92
           + NPRIVRVSR+FGGKDRHSKVCT+RGLRDRRIRLSV TAIQ+YDLQ++L L QPSKVID
Sbjct: 19  WNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQERLGLSQPSKVID 78

Query: 93  WLLDVTKLDIDKLPPLQIPTGF 115
           WLL+V K D+D LPPLQ P GF
Sbjct: 79  WLLEVAKNDVDLLPPLQFPPGF 100

[Close]

BLAST of Cp4.1LG18g07140 vs. TAIR 10
Match: AT1G30210.1 (TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 )

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-18
Identity = 107/341 (31.38%), Postives = 156/341 (45.75%), Query Frame = 0


Query: 7   EKGFESKEEGKYRFPKAPTS-SRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRI 66
           +K  E +     RF +  T   R W+   + RI+RVSR+ GGKDRHSKV T +GLRDRRI
Sbjct: 10  QKHQEQQSRKLQRFSEDNTGLMRNWNN-PSSRIIRVSRASGGKDRHSKVLTSKGLRDRRI 69

Query: 67  RLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLQIPTGFSPFHQQMLFPP 126
           RLSV TAIQ YDLQD+L   QPSK ++WL++     I  LP L              F  
Sbjct: 70  RLSVATAIQFYDLQDRLGFDQPSKAVEWLINAASDSITDLPLLNTN-----------FDH 129

Query: 127 YDHHHHYYSSSSSSSSSQFCNSLPLPFAVDVKGDS--TAIEKTKIWDMDLALQGKASSLT 186
            D + +   S+ SS +S+  +SL      +++G +   A E+T   D D  LQ   SS T
Sbjct: 130 LDQNQNQTKSACSSGTSE--SSLLSLSRTEIRGKARERARERT-AKDRDKDLQNAHSSFT 189

Query: 187 KGKWVDGSSNQHVEDYNFTPYNTYNSSQFGNNNGVFPSQIEAPTSS-------------- 246
             + + G  +Q   + N+T          G ++   P Q++ P SS              
Sbjct: 190 --QLLTGGFDQQPSNRNWT----------GGSDCFNPVQLQIPNSSSQEPMNHPFSFVPD 249

Query: 247 -----SSASALFFTPYASYITNPFESHIHFLSSNPHALSNPFV---PSALHPFASQNLKP 306
                SS+S+     Y+S  T    S   FL++N +      +    S+  P  SQ++  
Sbjct: 250 YNFGISSSSSAINGGYSSRGTLQSNSQSLFLNNNNNITQRSSISSSSSSSSPMDSQSISF 309

Query: 307 FSAA-------------SFNFKQLLHAADGNGADRSNKDGA 310
           F A              +F+ +  L+  +GN   RS+ D A
Sbjct: 310 FMATPPPLDHHNHQLPETFDGRLYLYYGEGN---RSSDDKA 320

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g07140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FME3	5.6e-42	43.80	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
Q9S7W5	8.9e-32	63.72	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
Q9LEZ9	3.4e-31	79.27	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
A2XMN1	2.1e-17	57.65	Transcription factor PCF6 OS=Oryza sativa subsp. indica OX=39946 GN=PCF6 PE=4 SV...	[more]
Q10CE8	2.1e-17	57.65	Transcription factor PCF6 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF6 PE=2 ...	[more]

BLAST of Cp4.1LG18g07140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516672.1	7.34e-226	100.00	transcription factor TCP5-like [Cucurbita pepo subsp. pepo]	[more]
KAG7023291.1	6.97e-217	97.45	Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6589600.1	1.11e-215	96.81	Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022921970.1	3.86e-214	96.50	transcription factor TCP5-like isoform X1 [Cucurbita moschata]	[more]
XP_022987421.1	2.31e-211	94.64	transcription factor TCP5-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG18g07140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E797	1.87e-214	96.50	transcription factor TCP5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1JE53	1.12e-211	94.64	transcription factor TCP5-like OS=Cucurbita maxima OX=3661 GN=LOC111484971 PE=4 ...	[more]
A0A6J1E2U7	5.59e-204	96.00	transcription factor TCP5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A0A0LRU6	2.67e-146	64.46	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G014310 PE=4 SV...	[more]
A0A5A7UWW8	2.43e-144	63.14	Transcription factor TCP5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]

BLAST of Cp4.1LG18g07140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60970.1	3.9e-43	43.80	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT3G02150.1	6.3e-33	63.72	plastid transcription factor 1	[more]
AT3G02150.2	6.3e-33	63.72	plastid transcription factor 1	[more]
AT5G08070.1	2.4e-32	79.27	TCP domain protein 17	[more]
AT1G30210.1	1.5e-18	31.38	TEOSINTE BRANCHED 1, cycloidea, and PCF family 24	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 47..162 e-value: 6.1E-24 score: 85.3
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 47..105 score: 26.691658
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR31072:SF168	TRANSCRIPTION FACTOR TCP5	coord: 18..313
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 18..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g07140.1	Cp4.1LG18g07140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003700	DNA-binding transcription factor activity