Cp4.1LG18g06620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g06620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DUF4228 domain protein
Location	Cp4.1LG18: 6762630 .. 6763139 (+)
RNA-Seq Expression	Cp4.1LG18g06620
Synteny	Cp4.1LG18g06620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACTCTGCGTCTTGTGCGCCTTCAATGGCCTCCAATGGCGCCGCGAAGGTCTTATCCTTAGACGGAAAATTGCAGAGCTATAGGAAGCCAGTGCAGGCCGCGGAACTAATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGCTGATCTCAGCGTCGGCCACCGGATTCAAGGCCTTTTGCCAGACGAAGATCTCGAGTGCCGGCGATTATACTTTCTACTTCCGATGGATCTCCTCTACTCCGTGCTAACGCTCGAAGAAATGAGATCTCTGACGTACACCGCCACAAAGGCTCTGAAACATGGAAATTCGAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCACTGATCTCTGTATTTCTCTGTCGGATGTGAATCGATTGAAATCGGCGGACGGCGATCGAGAGAATCGAAGTTCGAAACCTGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCCGCGCTCGAAACCATCGCTGAAACTTCGTGCGCGTAG

mRNA sequence

ATGGGGAACTCTGCGTCTTGTGCGCCTTCAATGGCCTCCAATGGCGCCGCGAAGGTCTTATCCTTAGACGGAAAATTGCAGAGCTATAGGAAGCCAGTGCAGGCCGCGGAACTAATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGCTGATCTCAGCGTCGGCCACCGGATTCAAGGCCTTTTGCCAGACGAAGATCTCGAGTGCCGGCGATTATACTTTCTACTTCCGATGGATCTCCTCTACTCCGTGCTAACGCTCGAAGAAATGAGATCTCTGACGTACACCGCCACAAAGGCTCTGAAACATGGAAATTCGAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCACTGATCTCTGTATTTCTCTGTCGGATGTGAATCGATTGAAATCGGCGGACGGCGATCGAGAGAATCGAAGTTCGAAACCTGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCCGCGCTCGAAACCATCGCTGAAACTTCGTGCGCGTAG

Coding sequence (CDS)

ATGGGGAACTCTGCGTCTTGTGCGCCTTCAATGGCCTCCAATGGCGCCGCGAAGGTCTTATCCTTAGACGGAAAATTGCAGAGCTATAGGAAGCCAGTGCAGGCCGCGGAACTAATGATCGAGCATTCCGGAAAATTCCTCTGCGATTCCGCTGATCTCAGCGTCGGCCACCGGATTCAAGGCCTTTTGCCAGACGAAGATCTCGAGTGCCGGCGATTATACTTTCTACTTCCGATGGATCTCCTCTACTCCGTGCTAACGCTCGAAGAAATGAGATCTCTGACGTACACCGCCACAAAGGCTCTGAAACATGGAAATTCGAGTGGATTTGGAAGGATCTTCCCTGTTTTGATCACTGATCTCTGTATTTCTCTGTCGGATGTGAATCGATTGAAATCGGCGGACGGCGATCGAGAGAATCGAAGTTCGAAACCTGTGCAGAGATTGATGTCGAAACAGAGATCGTGGAAGCCCGCGCTCGAAACCATCGCTGAAACTTCGTGCGCGTAG

Protein sequence

MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITDLCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA

Homology

[Close]

BLAST of Cp4.1LG18g06620 vs. NCBI nr
Match: XP_022921761.1 (uncharacterized protein LOC111429917 [Cucurbita moschata])

HSP 1 Score: 327 bits (837), Expect = 1.63e-112
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ
Sbjct: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLLPDEDLECRRLYFLLPMDLLYSVLT+EEMRSLTYTATKALKHGNSSGFGRIFPVLITD
Sbjct: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTIEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120

Query: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 169
           LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA
Sbjct: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 169

[Close]

BLAST of Cp4.1LG18g06620 vs. NCBI nr
Match: KAG7023330.1 (hypothetical protein SDJN02_14355, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 326 bits (835), Expect = 3.29e-112
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGNSASC PSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ
Sbjct: 1   MGNSASCVPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD
Sbjct: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120

Query: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 169
           LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA
Sbjct: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 169

[Close]

BLAST of Cp4.1LG18g06620 vs. NCBI nr
Match: XP_022987495.1 (uncharacterized protein LOC111485040 [Cucurbita maxima])

HSP 1 Score: 322 bits (824), Expect = 1.56e-110
Identity = 167/169 (98.82%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGNSASCAPSMASNGAAKVLSLDGKLQSY K VQAAELMIEHSGKFLCDSADLSVGHRIQ
Sbjct: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYTKRVQAAELMIEHSGKFLCDSADLSVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD
Sbjct: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120

Query: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 169
           LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA
Sbjct: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 169

[Close]

BLAST of Cp4.1LG18g06620 vs. NCBI nr
Match: XP_023516747.1 (uncharacterized protein LOC111780552 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309 bits (792), Expect = 8.37e-106
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 11  MASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDEDLEC 70
           MASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDEDLEC
Sbjct: 1   MASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDEDLEC 60

Query: 71  RRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITDLCISLSDVNR 130
           RRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITDLCISLSDVNR
Sbjct: 61  RRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITDLCISLSDVNR 120

Query: 131 LKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 169
           LKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA
Sbjct: 121 LKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 159

[Close]

BLAST of Cp4.1LG18g06620 vs. NCBI nr
Match: KAG6589641.1 (hypothetical protein SDJN03_15064, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 307 bits (786), Expect = 6.88e-105
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 11  MASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDEDLEC 70
           MASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDEDLEC
Sbjct: 1   MASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDEDLEC 60

Query: 71  RRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITDLCISLSDVNR 130
           RRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSG GRIFPVLITDLCISLSDVNR
Sbjct: 61  RRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGLGRIFPVLITDLCISLSDVNR 120

Query: 131 LKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 169
           LKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA
Sbjct: 121 LKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 159

[Close]

BLAST of Cp4.1LG18g06620 vs. ExPASy TrEMBL
Match: A0A6J1E2A0 (uncharacterized protein LOC111429917 OS=Cucurbita moschata OX=3662 GN=LOC111429917 PE=4 SV=1)

HSP 1 Score: 327 bits (837), Expect = 7.88e-113
Identity = 168/169 (99.41%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ
Sbjct: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLLPDEDLECRRLYFLLPMDLLYSVLT+EEMRSLTYTATKALKHGNSSGFGRIFPVLITD
Sbjct: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTIEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120

Query: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 169
           LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA
Sbjct: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 169

[Close]

BLAST of Cp4.1LG18g06620 vs. ExPASy TrEMBL
Match: A0A6J1JH13 (uncharacterized protein LOC111485040 OS=Cucurbita maxima OX=3661 GN=LOC111485040 PE=4 SV=1)

HSP 1 Score: 322 bits (824), Expect = 7.57e-111
Identity = 167/169 (98.82%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGNSASCAPSMASNGAAKVLSLDGKLQSY K VQAAELMIEHSGKFLCDSADLSVGHRIQ
Sbjct: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYTKRVQAAELMIEHSGKFLCDSADLSVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD
Sbjct: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120

Query: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 169
           LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA
Sbjct: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSCA 169

[Close]

BLAST of Cp4.1LG18g06620 vs. ExPASy TrEMBL
Match: A0A6J1C0W6 (uncharacterized protein LOC111007254 OS=Momordica charantia OX=3673 GN=LOC111007254 PE=4 SV=1)

HSP 1 Score: 279 bits (714), Expect = 1.05e-93
Identity = 147/170 (86.47%), Postives = 154/170 (90.59%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGNSASCAPSM SNGAAKVLSLDGKL+SY KPV+AAELMIE+SGKFLCDS DL VGHRIQ
Sbjct: 24  MGNSASCAPSMVSNGAAKVLSLDGKLESYTKPVKAAELMIENSGKFLCDSGDLKVGHRIQ 83

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLLPDEDLECRRLYFLLPMDLLYSVLTLEEM SLTY ATKALK GNSSGFGRIFPVLI++
Sbjct: 84  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMSSLTYIATKALKQGNSSGFGRIFPVLISE 143

Query: 121 LCISLSDVNRLKSADGDRE--NRSSKPVQRLMSKQRSWKPALETIAETSC 168
           LCI  S+VNRLKS   DRE  N + KPVQRLMSKQRSWKPALETIAETSC
Sbjct: 144 LCILPSEVNRLKSEHSDRETENSTKKPVQRLMSKQRSWKPALETIAETSC 193

[Close]

BLAST of Cp4.1LG18g06620 vs. ExPASy TrEMBL
Match: A0A6J1HLR9 (uncharacterized protein LOC111465363 OS=Cucurbita maxima OX=3661 GN=LOC111465363 PE=4 SV=1)

HSP 1 Score: 271 bits (693), Expect = 7.29e-91
Identity = 144/169 (85.21%), Postives = 152/169 (89.94%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGNSA CAPSMA NGAAKVL+LDG LQS+ KPV+AAELMIEHSGKFLCDS DL VGHRI 
Sbjct: 1   MGNSAFCAPSMAFNGAAKVLTLDGNLQSFTKPVKAAELMIEHSGKFLCDSGDLKVGHRIP 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLL +E LECRRLYFLLPMDLLYSVLT+EEM SLTY ATKALK GNSSGFGRIFPVLI++
Sbjct: 61  GLLTEEYLECRRLYFLLPMDLLYSVLTIEEMSSLTYIATKALKRGNSSGFGRIFPVLISE 120

Query: 121 LCISLSDVNRLKSADGDREN-RSSKPVQRLMSKQRSWKPALETIAETSC 168
           LCI  SDVN LKSADGD EN +SSKPVQRLMSKQRSWKPALETIAETSC
Sbjct: 121 LCIFPSDVNGLKSADGDGENNQSSKPVQRLMSKQRSWKPALETIAETSC 169

[Close]

BLAST of Cp4.1LG18g06620 vs. ExPASy TrEMBL
Match: A0A5D3E1W3 (DUF4228 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46571G00010 PE=4 SV=1)

HSP 1 Score: 268 bits (684), Expect = 1.66e-89
Identity = 141/168 (83.93%), Postives = 150/168 (89.29%), Query Frame = 0


Query: 1   MGNSASCAPSMASNGAAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQ 60
           MGNSASCAPS+ASNGAAKVLSLDG LQS+ KPV AAELMIEHSGKFLCDS+DL VGHRIQ
Sbjct: 1   MGNSASCAPSIASNGAAKVLSLDGTLQSFTKPVTAAELMIEHSGKFLCDSSDLKVGHRIQ 60

Query: 61  GLLPDEDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITD 120
           GLLPDEDLE RRLYFLLPMDLLYSVLTLEEM SLT+ ATKALK GNSSGFGRIFPVLI++
Sbjct: 61  GLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKQGNSSGFGRIFPVLISE 120

Query: 121 LCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAETSC 168
            C S +DV  LK  D D EN+SSK V+RLMSKQRSWKPALETIAETSC
Sbjct: 121 FCNSPADVKGLKLEDDDGENQSSKAVKRLMSKQRSWKPALETIAETSC 168

[Close]

BLAST of Cp4.1LG18g06620 vs. TAIR 10
Match: AT1G18290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 105.1 bits (261), Expect = 5.5e-23
Identity = 67/176 (38.07%), Postives = 99/176 (56.25%), Query Frame = 0


Query: 1   MGNSASCAP----SMASNGAAKVLS-LDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSV 60
           MGN++SCAP    + +S+G  K+L+   G L+ + KP++ ++++  HSG F+ DS  L +
Sbjct: 1   MGNTSSCAPLIISTNSSSGVVKILAPFTGTLEVFSKPIKTSDIVSRHSGHFITDSTLLQI 60

Query: 61  GHRIQGLLPDEDLECRR-LYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIF 120
            HR+  + PDE L  RR LY LLP D+L+SVLT EE+  ++  A + L     +   RIF
Sbjct: 61  SHRVTAVSPDEYLRPRRHLYLLLPTDMLFSVLTQEELSLISNKAAETLNKSRYNHLKRIF 120

Query: 121 PVLI----TDLCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAET 167
           PV I     D   + S VN  ++ DG     +        SK  SW+P LETI E+
Sbjct: 121 PVCIFPMTGDRRRNPSSVNEDRAHDGVEIRETLDEKVLYESKHGSWRPKLETIVES 176

[Close]

BLAST of Cp4.1LG18g06620 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 5.3e-10
Identity = 38/134 (28.36%), Postives = 68/134 (50.75%), Query Frame = 0


Query: 7   CAPSMASNGA-AKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPD 66
           C+ S ++  A AK++  DG++  +  PV+   +++++   F+C+S D+     +  +  D
Sbjct: 4   CSSSESTQVATAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAISAD 63

Query: 67  EDLECRRLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFPVLITDLCIS- 126
           E+L+  ++YF LP+  L   L  EEM +L   A+ AL  G   G  R         C+  
Sbjct: 64  EELQLGQIYFALPLCWLRQPLKAEEMAALAVKASSALMRGGGGGCRR--------KCVEP 123

Query: 127 -LSDVNRLKSADGD 138
            +SD  R++   GD
Sbjct: 124 IVSDKLRMRVGSGD 129

[Close]

BLAST of Cp4.1LG18g06620 vs. TAIR 10
Match: AT3G03280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09
Identity = 55/175 (31.43%), Postives = 80/175 (45.71%), Query Frame = 0


Query: 1   MGNSASCAPSMASNG-AAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRI 60
           MGN  SCA +  S+   AKV+  DG ++    P +AAELM+E    FL D+  + VG + 
Sbjct: 1   MGNYVSCALNKTSSSPLAKVILPDGGVRDIHVPTKAAELMMEMPSYFLVDTKSVKVGRKF 60

Query: 61  QGLLPDEDLECR--RLYFLLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGFGRIFP-- 120
             L  D+DL+     +Y   PM    S     +M  L  T  K  K   + G  R+ P  
Sbjct: 61  IPLAADDDLDLGGCHVYVAFPMTRATSAANASDMARLYLTGKKRTK---NCGHRRVSPEN 120

Query: 121 -----VLITDLCISLSDVNRLKSADGDRENRSSKPVQRLMSKQRSWKPALETIAE 166
                V +    ++L D+    +A+          + R+ S  +S KP LETIAE
Sbjct: 121 EDNDDVRLIGPKLNLEDIEEFSAAEF---------IHRI-SVSKSKKPQLETIAE 162

[Close]

BLAST of Cp4.1LG18g06620 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 58.5 bits (140), Expect = 5.9e-09
Identity = 29/95 (30.53%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 16  AAKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDEDLECRRLYF 75
           +AK++ LDG LQ +  PV+  +++ ++   F+C+S ++     +  +  +E+L   +LYF
Sbjct: 14  SAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAVAGNEELRSGQLYF 73

Query: 76  LLPMDLLYSVLTLEEMRSLTYTATKALKHGNSSGF 111
           +LP+  L   L  EEM +L   A+ AL      G+
Sbjct: 74  VLPLTWLNHPLRAEEMAALAVKASSALTKSGGVGW 108

[Close]

BLAST of Cp4.1LG18g06620 vs. TAIR 10
Match: AT1G28190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12340.1); Has 166 Blast hits to 162 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 15; Fungi - 5; Plants - 124; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 7.4e-04
Identity = 29/87 (33.33%), Postives = 42/87 (48.28%), Query Frame = 0


Query: 9   PSMASNGA-AKVLSLDGKLQSYRKPVQAAELMIEHSGKFLCDSADLSVGHRIQGLLPDED 68
           P   SNG   K++  DG LQ Y +PV  +EL  +     +C S  L +G +   L   E 
Sbjct: 30  PDRTSNGGRIKLVRSDGSLQVYDRPVVVSELTKDFPKHKICRSDLLYIGQKTPVLSETET 89

Query: 69  LECRRLYFLLPMDLLYSVLTLEEMRSL 95
           L+    YFLLP D   + L+   + +L
Sbjct: 90  LKLGLNYFLLPSDFFKNDLSFLTIATL 116

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g06620 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG18g06620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921761.1	1.63e-112	99.41	uncharacterized protein LOC111429917 [Cucurbita moschata]	[more]
KAG7023330.1	3.29e-112	99.41	hypothetical protein SDJN02_14355, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022987495.1	1.56e-110	98.82	uncharacterized protein LOC111485040 [Cucurbita maxima]	[more]
XP_023516747.1	8.37e-106	100.00	uncharacterized protein LOC111780552 [Cucurbita pepo subsp. pepo]	[more]
KAG6589641.1	6.88e-105	99.37	hypothetical protein SDJN03_15064, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG18g06620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E2A0	7.88e-113	99.41	uncharacterized protein LOC111429917 OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]
A0A6J1JH13	7.57e-111	98.82	uncharacterized protein LOC111485040 OS=Cucurbita maxima OX=3661 GN=LOC111485040...	[more]
A0A6J1C0W6	1.05e-93	86.47	uncharacterized protein LOC111007254 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A6J1HLR9	7.29e-91	85.21	uncharacterized protein LOC111465363 OS=Cucurbita maxima OX=3661 GN=LOC111465363...	[more]
A0A5D3E1W3	1.66e-89	83.93	DUF4228 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]

BLAST of Cp4.1LG18g06620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18290.1	5.5e-23	38.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT4G37240.1	5.3e-10	28.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT3G03280.1	1.2e-09	31.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT5G66580.1	5.9e-09	30.53	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]
AT1G28190.1	7.4e-04	33.33	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..165 e-value: 2.0E-32 score: 113.0
None	No IPR available	PANTHER	PTHR33052	DUF4228 DOMAIN PROTEIN-RELATED	coord: 1..166
None	No IPR available	PANTHER	PTHR33052:SF19	DUF4228 DOMAIN PROTEIN	coord: 1..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g06620.1	Cp4.1LG18g06620.1	mRNA