Cp4.1LG18g06510 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g06510
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	glutaredoxin-C4-like
Location	Cp4.1LG18: 6646821 .. 6649091 (+)
RNA-Seq Expression	Cp4.1LG18g06510
Synteny	Cp4.1LG18g06510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTAATATCTTACAAGACGTGTGAATATACAATAGATGCTGAATTTCAGTCATTGTCTTCTCTAAAATTACGCTTACGAGCAATTAATCGCCAATCGCAGAAACCTCACCGGAATAAGGTTAATTGCAGGCCGGAGTTTGGATCAATGGCAGCGACGATGAGTATGAGGAAGATGCTGACGTTATCAGCAGCTATGGTCTGCGCCGTAGCCGTAGCGTCTTTATACGGGGCCTCAGCTTCCACGGAAACACGCTTCATCAAGAACACCATCGCCTCGCATCAGATCGTCATCTTCTCCAAGTCCTATTGCCCGTAATTTCCTTCTCATTCCTCTTTTCTCTTCTTAATCGATTTATTCAGACTCCATTGTGGATCTATTCGTCTCATTTCTCCAAATCGACTTTTGTTGTTCCGTTCTTAACCCGCTGTGGCCATGTTTTCTATTACTTTTAAGTTTTGTTGCCCTACATTTGGAAGCAGATCGAGGAAGGGGCGAGTTTCCGCTTCTCTTAATTGTTTTTTTTTTGTGCATACAGGTACTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGAACAAAGTTCCTTATGTTGTTGAGCTGGATCAAAGAGGTACTTGCATAATCTGCCTTTTTCTCGTTCTGTTTATCAAAACTAGCAATATCACCATGGTTTAAATCTGATTGAAACTCAGTATGCTTGTTTCTTGTTTTTGTGCTCCTTTTATTGCACGTCTTCTGTTGTTGCCCTGCCAGTATATCTAGATTTCGGACAATTTCATATGAAAATCTTGTTCTGGCCTATGCTCTCCGCATTATGAAAATATTGGTTGGGATATTACACTTGATATGGGCATGCTTGATATCTAGATTTCGGAAAACTTCATATGAAAATCTTCTCTTATATCTTTTCTGATGATTTTATCATCATTATTTAAATGAACGATTTTTTCAACTTAATTGTGACGGAGTAGTAAGAGAATTTGTGCTTAGTATTGCCTCCAGCCTCTCGAAATGGTGACTGCCTGCGACTGGAATATTTATGTAGTAGGTCTTGTGACATGATTCTCTGTAAAATGCTTTCCGCTTCGAAACTAACATGGCCGTTTGGGATTGTCTATTCTCTTCATCTAAAATCCTCACTCTGGCTGAACATATGGCAACTGGTTTAGGCATATACTCTCGACTAAGTAGTTAGAGGTTCGAATCCCCCACCCCATAGATGTGGTTGAACTAAAAAATGTTCAAATTACTCTATCTAATCAGATCACACACTCAGATCCACCCCCCCAAACAACAATGGAAGGTAATTCCTTCTAGTTTATGTGTTCTTTTGGGAGTTAAGAGAGGGAGGAGGGTAGAGGAAGGTAGAAAACAGCAATGAAAGGGGGAAACGGTGTGCAAGAGTATGTCCTATTAGTTGCTGCCTGAAATGTCTATTTACTAAGAAAAAGCTTAGATTATGGGTCGACTAATTATGTATAATGTTGTTCAAAATCCTCTTCTTTTTATCTTTTTAGTTGATTTGCAGGTTCTTTGTTATGTTTTTTCTCTTTTGTTTCCCTTTTCGAGATGGGTGGGGAGAATTCAAGCTTTGGATGAATTCTCTAAACGAACTAGCAAAAGGGTTATCAGTAAACATATATCTGGCTTTTGTTTCTGTATCTATGTATATCTGGTGGTATTCCTTCATCTAAAGGTTAATAATACTCAATAGAATTTGGATCTGTATCTCACAGAGGATGGCAGTGACATTCAAGATGCTTTTATGGCACTCATCGGAAGGCGCACTGTACCTCAAGTGTTCGTAAATGGAAAACACATAGGTGGATCGGATGGTAATGGGGCTCTTCTATGGCAAATTTTTGTGTGGTAACATATTTCTCCAAGTACTTCTAACTTATTGAAACCCTGATTCCAGATACCATTGAAGCATATGAGAGTGGGAAGTTGAGTAAGCTCCTGGGCATTAATGAAGAGCATAAAGCGGATCTTTGAATCAAACCCTTCTACTGTAAGCAGAGATATTTGCACCAACAGAGTATATTTTGCTTGGATCAGTTGTTCAATTGTAACTCTTAATGGTGGTGGATAAGTTTTCTCTGTAGCTCTCTCTCTCTCTCTGTCTCACACTAGTGATAACAATGCTTTTCTTGTAAGGAAATTTTCGAACTTCAATAGATCGAACCATTTTTGCGTGTCTACGCTTGTTTAATTGGATTCGGTTGGTCTCTTCATTTTCTAGACAGAGTTTTAAAATTTTATATTTGATGT

mRNA sequence

CGTAATATCTTACAAGACGTGTGAATATACAATAGATGCTGAATTTCAGTCATTGTCTTCTCTAAAATTACGCTTACGAGCAATTAATCGCCAATCGCAGAAACCTCACCGGAATAAGGTTAATTGCAGGCCGGAGTTTGGATCAATGGCAGCGACGATGAGTATGAGGAAGATGCTGACGTTATCAGCAGCTATGGTCTGCGCCGTAGCCGTAGCGTCTTTATACGGGGCCTCAGCTTCCACGGAAACACGCTTCATCAAGAACACCATCGCCTCGCATCAGATCGTCATCTTCTCCAAGTCCTATTGCCCGTACTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGAACAAAGTTCCTTATGTTGTTGAGCTGGATCAAAGAGAGGATGGCAGTGACATTCAAGATGCTTTTATGGCACTCATCGGAAGGCGCACTGTACCTCAAGTGTTCGTAAATGGAAAACACATAGGTGGATCGGATGATACCATTGAAGCATATGAGAGTGGGAAGTTGAGTAAGCTCCTGGGCATTAATGAAGAGCATAAAGCGGATCTTTGAATCAAACCCTTCTACTGTAAGCAGAGATATTTGCACCAACAGAGTATATTTTGCTTGGATCAGTTGTTCAATTGTAACTCTTAATGGTGGTGGATAAGTTTTCTCTGTAGCTCTCTCTCTCTCTCTGTCTCACACTAGTGATAACAATGCTTTTCTTGTAAGGAAATTTTCGAACTTCAATAGATCGAACCATTTTTGCGTGTCTACGCTTGTTTAATTGGATTCGGTTGGTCTCTTCATTTTCTAGACAGAGTTTTAAAATTTTATATTTGATGT

Coding sequence (CDS)

ATGGCAGCGACGATGAGTATGAGGAAGATGCTGACGTTATCAGCAGCTATGGTCTGCGCCGTAGCCGTAGCGTCTTTATACGGGGCCTCAGCTTCCACGGAAACACGCTTCATCAAGAACACCATCGCCTCGCATCAGATCGTCATCTTCTCCAAGTCCTATTGCCCGTACTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGAACAAAGTTCCTTATGTTGTTGAGCTGGATCAAAGAGAGGATGGCAGTGACATTCAAGATGCTTTTATGGCACTCATCGGAAGGCGCACTGTACCTCAAGTGTTCGTAAATGGAAAACACATAGGTGGATCGGATGATACCATTGAAGCATATGAGAGTGGGAAGTTGAGTAAGCTCCTGGGCATTAATGAAGAGCATAAAGCGGATCTTTGA

Protein sequence

MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGKLSKLLGINEEHKADL

Homology

[Close]

BLAST of Cp4.1LG18g06510 vs. ExPASy Swiss-Prot
Match: Q8LFQ6 (Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2)

HSP 1 Score: 162.9 bits (411), Expect = 2.5e-39
Identity = 78/135 (57.78%), Postives = 110/135 (81.48%), Query Frame = 0


Query: 5   MSMRKMLTLSAAMVCAVAVASLYGASAST-ETRFIKNTIASHQIVIFSKSYCPYCRRAKA 64
           M+M + +++   +V  V   S+  ++AS+ E  F+K TI+SH+IVIFSKSYCPYC++AK+
Sbjct: 1   MTMFRSISMVMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKS 60

Query: 65  VFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGK 124
           VF+EL++VPYVVELD+REDG  IQ A   ++GRRTVPQVF+NGKH+GGSDDT++AYESG+
Sbjct: 61  VFRELDQVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGE 120

Query: 125 LSKLLGINEEHKADL 139
           L+KLLG++   +A+L
Sbjct: 121 LAKLLGVSGNKEAEL 135

[Close]

BLAST of Cp4.1LG18g06510 vs. ExPASy Swiss-Prot
Match: Q0DAE4 (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 8.2e-38
Identity = 81/133 (60.90%), Postives = 104/133 (78.20%), Query Frame = 0


Query: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAA +  R    ++AA + A+A      +  ++++ F+K+T+ +H +VIFSKSYCPYCRR
Sbjct: 1   MAALLGRR--FGMAAAALIALAALGSAASGTASKSSFVKSTVKAHDVVIFSKSYCPYCRR 60

Query: 61  AKAVFK--ELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEA 120
           AKAVFK  EL K PYVVELDQREDG +IQDA   ++GRRTVPQVFV+GKH+GGSDDT+EA
Sbjct: 61  AKAVFKELELKKEPYVVELDQREDGWEIQDALSDMVGRRTVPQVFVHGKHLGGSDDTVEA 120

Query: 121 YESGKLSKLLGIN 132
           YESGKL+KLL I+
Sbjct: 121 YESGKLAKLLNID 131

[Close]

BLAST of Cp4.1LG18g06510 vs. ExPASy Swiss-Prot
Match: Q9FVX1 (Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.8e-29
Identity = 65/123 (52.85%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 6   SMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVF 65
           S R+++  +  +   +   S    +A++ + F++N I S++IVIFSKSYCPYC R+K +F
Sbjct: 5   SPRRVVVAALLLFVVLCDLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIF 64

Query: 66  KELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGKLS 125
            +L + P+VVELDQREDG  IQ   +  +GRRTVPQVFVNGKHIGGSDD   A ESG+L 
Sbjct: 65  SQLKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQ 124

Query: 126 KLL 129
           KLL
Sbjct: 125 KLL 127

[Close]

BLAST of Cp4.1LG18g06510 vs. ExPASy Swiss-Prot
Match: Q6H628 (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.1e-29
Identity = 57/107 (53.27%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 29  ASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQD 88
           A+  + + F++N I S++I IFSK+YCPY  RAK +F++L + PY+VELD REDG +IQ 
Sbjct: 25  AATRSPSAFVQNAIYSNRITIFSKTYCPYSMRAKRIFRDLKENPYIVELDLREDGREIQS 84

Query: 89  AFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGKLSKLLGINEEHK 136
             + L+GR TVPQVFVNG+H+GGSDDT  A+ +G+L KLLG ++  +
Sbjct: 85  VLLDLVGRHTVPQVFVNGQHVGGSDDTANAHSNGQLQKLLGNSQSQR 131

[Close]

BLAST of Cp4.1LG18g06510 vs. ExPASy Swiss-Prot
Match: P55142 (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 5.3e-21
Identity = 46/90 (51.11%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 39  KNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRT 98
           K T+AS  +V++SKSYCP+C R K +F++L      +ELD   DGS++Q A     G+RT
Sbjct: 7   KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRT 66

Query: 99  VPQVFVNGKHIGGSDDTIEAYESGKLSKLL 129
           VP VF+NGKHIGG DDT+     GKL  LL
Sbjct: 67  VPNVFINGKHIGGCDDTLALNNEGKLVPLL 96

[Close]

BLAST of Cp4.1LG18g06510 vs. NCBI nr
Match: XP_023516627.1 (glutaredoxin-C4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265 bits (676), Expect = 5.64e-89
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120

Query: 121 SGKLSKLLGINEEHKADL 138
           SGKLSKLLGINEEHKADL
Sbjct: 121 SGKLSKLLGINEEHKADL 138

[Close]

BLAST of Cp4.1LG18g06510 vs. NCBI nr
Match: XP_022987347.1 (glutaredoxin-C4-like [Cucurbita maxima])

HSP 1 Score: 262 bits (669), Expect = 6.59e-88
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MA TMSMRKMLT+SAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120

Query: 121 SGKLSKLLGINEEHKADL 138
           SGKLSKLLGINEEHKADL
Sbjct: 121 SGKLSKLLGINEEHKADL 138

[Close]

BLAST of Cp4.1LG18g06510 vs. NCBI nr
Match: XP_022921332.1 (glutaredoxin-C4-like [Cucurbita moschata])

HSP 1 Score: 262 bits (669), Expect = 6.59e-88
Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAATMSMRKMLT+SAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120
           AKAVFKELNKVPYVVELDQREDGS+IQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSEIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120

Query: 121 SGKLSKLLGINEEHKADL 138
           SGKLSKLLGINEEHKADL
Sbjct: 121 SGKLSKLLGINEEHKADL 138

[Close]

BLAST of Cp4.1LG18g06510 vs. NCBI nr
Match: KAG6589674.1 (Glutaredoxin-C4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 263 bits (673), Expect = 7.20e-88
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAATMSMRKMLT+SAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 45  MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 104

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE
Sbjct: 105 AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 164

Query: 121 SGKLSKLLGINEEHKADL 138
           SGKLSKLLGINEEHKADL
Sbjct: 165 SGKLSKLLGINEEHKADL 182

[Close]

BLAST of Cp4.1LG18g06510 vs. NCBI nr
Match: TYK28556.1 (glutaredoxin-C4-like [Cucumis melo var. makuwa])

HSP 1 Score: 217 bits (552), Expect = 4.39e-70
Identity = 113/138 (81.88%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAAT+SMRK+LT SAAMVCAVA+ASL  AS+S E+ FIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120
           AKAVFKELNKVP+VVELDQR+DGS +Q+A   L GRRTVPQVF++GKHIGGSDDT+EAYE
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSDDTVEAYE 120

Query: 121 SGKLSKLLGINEEHKADL 138
           SG+LSKLLGI E+HKADL
Sbjct: 121 SGELSKLLGIKEDHKADL 137

[Close]

BLAST of Cp4.1LG18g06510 vs. ExPASy TrEMBL
Match: A0A6J1JA45 (glutaredoxin-C4-like OS=Cucurbita maxima OX=3661 GN=LOC111484927 PE=3 SV=1)

HSP 1 Score: 262 bits (669), Expect = 3.19e-88
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MA TMSMRKMLT+SAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120

Query: 121 SGKLSKLLGINEEHKADL 138
           SGKLSKLLGINEEHKADL
Sbjct: 121 SGKLSKLLGINEEHKADL 138

[Close]

BLAST of Cp4.1LG18g06510 vs. ExPASy TrEMBL
Match: A0A6J1E059 (glutaredoxin-C4-like OS=Cucurbita moschata OX=3662 GN=LOC111429636 PE=3 SV=1)

HSP 1 Score: 262 bits (669), Expect = 3.19e-88
Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAATMSMRKMLT+SAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120
           AKAVFKELNKVPYVVELDQREDGS+IQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSEIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120

Query: 121 SGKLSKLLGINEEHKADL 138
           SGKLSKLLGINEEHKADL
Sbjct: 121 SGKLSKLLGINEEHKADL 138

[Close]

BLAST of Cp4.1LG18g06510 vs. ExPASy TrEMBL
Match: A0A5D3DXQ7 (Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002030 PE=3 SV=1)

HSP 1 Score: 217 bits (552), Expect = 2.13e-70
Identity = 113/138 (81.88%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAAT+SMRK+LT SAAMVCAVA+ASL  AS+S E+ FIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120
           AKAVFKELNKVP+VVELDQR+DGS +Q+A   L GRRTVPQVF++GKHIGGSDDT+EAYE
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSDDTVEAYE 120

Query: 121 SGKLSKLLGINEEHKADL 138
           SG+LSKLLGI E+HKADL
Sbjct: 121 SGELSKLLGIKEDHKADL 137

[Close]

BLAST of Cp4.1LG18g06510 vs. ExPASy TrEMBL
Match: A0A0A0LXH3 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G427520 PE=3 SV=1)

HSP 1 Score: 216 bits (551), Expect = 3.02e-70
Identity = 112/138 (81.16%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAAT+SMRK+LT SAAMVCAVA+ASL GAS+S E+ FIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCGASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120
           AKAVFKEL+KVP+VVELDQR+DGS +Q+A   L GRRTVPQVF++GKHIGGSDDT+EAYE
Sbjct: 61  AKAVFKELHKVPHVVELDQRDDGSSLQNALSVLFGRRTVPQVFIDGKHIGGSDDTLEAYE 120

Query: 121 SGKLSKLLGINEEHKADL 138
           SG+L KLLGI E+HKADL
Sbjct: 121 SGELRKLLGIKEDHKADL 137

[Close]

BLAST of Cp4.1LG18g06510 vs. ExPASy TrEMBL
Match: A0A5A7UQP8 (Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005140 PE=3 SV=1)

HSP 1 Score: 215 bits (547), Expect = 1.23e-69
Identity = 112/138 (81.16%), Postives = 126/138 (91.30%), Query Frame = 0


Query: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60
           MAAT+SMRK+LT SAAMVCAVA+ASL  AS+S E+ FIKN IASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNAIASHQIVIFSKSYCPYCRR 60

Query: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120
           AKAVFKELNKVP+VVELDQR+DGS +Q+A   L GRRTVPQVF++GKHIGGSDDT+EAYE
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSDDTVEAYE 120

Query: 121 SGKLSKLLGINEEHKADL 138
           SG+LSKLLGI E+HKADL
Sbjct: 121 SGELSKLLGIKEDHKADL 137

[Close]

BLAST of Cp4.1LG18g06510 vs. TAIR 10
Match: AT5G20500.1 (Glutaredoxin family protein )

HSP 1 Score: 162.9 bits (411), Expect = 1.8e-40
Identity = 78/135 (57.78%), Postives = 110/135 (81.48%), Query Frame = 0


Query: 5   MSMRKMLTLSAAMVCAVAVASLYGASAST-ETRFIKNTIASHQIVIFSKSYCPYCRRAKA 64
           M+M + +++   +V  V   S+  ++AS+ E  F+K TI+SH+IVIFSKSYCPYC++AK+
Sbjct: 1   MTMFRSISMVMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKS 60

Query: 65  VFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGK 124
           VF+EL++VPYVVELD+REDG  IQ A   ++GRRTVPQVF+NGKH+GGSDDT++AYESG+
Sbjct: 61  VFRELDQVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGE 120

Query: 125 LSKLLGINEEHKADL 139
           L+KLLG++   +A+L
Sbjct: 121 LAKLLGVSGNKEAEL 135

[Close]

BLAST of Cp4.1LG18g06510 vs. TAIR 10
Match: AT1G77370.1 (Glutaredoxin family protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-30
Identity = 65/123 (52.85%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 6   SMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVF 65
           S R+++  +  +   +   S    +A++ + F++N I S++IVIFSKSYCPYC R+K +F
Sbjct: 5   SPRRVVVAALLLFVVLCDLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIF 64

Query: 66  KELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGKLS 125
            +L + P+VVELDQREDG  IQ   +  +GRRTVPQVFVNGKHIGGSDD   A ESG+L 
Sbjct: 65  SQLKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQ 124

Query: 126 KLL 129
           KLL
Sbjct: 125 KLL 127

[Close]

BLAST of Cp4.1LG18g06510 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 1.8e-19
Identity = 44/108 (40.74%), Postives = 69/108 (63.89%), Query Frame = 0


Query: 22  AVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQ-R 81
           A++S   +S ST    +K T+A + +V++SK++C Y  + K++FK L   P VVELDQ  
Sbjct: 62  AMSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLG 121

Query: 82  EDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGKLSKLL 129
            +GS +Q+    + G+ TVP VF+ GKHIGG  DT++ +  G+L  +L
Sbjct: 122 SEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAIL 169

[Close]

BLAST of Cp4.1LG18g06510 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-18
Identity = 42/90 (46.67%), Postives = 53/90 (58.89%), Query Frame = 0


Query: 39  KNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRT 98
           K  + S  +V+FSK+YCPYC R K + ++L      VELD   DGS IQ       G+RT
Sbjct: 7   KEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRT 66

Query: 99  VPQVFVNGKHIGGSDDTIEAYESGKLSKLL 129
           VP VF+ G HIGG D T   ++ GKL  LL
Sbjct: 67  VPNVFIGGNHIGGCDATSNLHKDGKLVPLL 96

[Close]

BLAST of Cp4.1LG18g06510 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 7.4e-18
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 39  KNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRT 98
           K  ++++ +V+FSK+YC YC+R K +  +L     V+ELD+  DG +IQ A     G+ T
Sbjct: 23  KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSEWTGQTT 82

Query: 99  VPQVFVNGKHIGGSDDTIEAYESGKLSKLL 129
           VP VF+ G HIGG D  +E  + GKL  LL
Sbjct: 83  VPNVFIKGNHIGGCDRVMETNKQGKLVPLL 112

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g06510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFQ6	2.5e-39	57.78	Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2	[more]
Q0DAE4	8.2e-38	60.90	Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2	[more]
Q9FVX1	1.8e-29	52.85	Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1	[more]
Q6H628	3.1e-29	53.27	Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2...	[more]
P55142	5.3e-21	51.11	Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2	[more]

BLAST of Cp4.1LG18g06510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023516627.1	5.64e-89	100.00	glutaredoxin-C4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987347.1	6.59e-88	98.55	glutaredoxin-C4-like [Cucurbita maxima]	[more]
XP_022921332.1	6.59e-88	98.55	glutaredoxin-C4-like [Cucurbita moschata]	[more]
KAG6589674.1	7.20e-88	99.28	Glutaredoxin-C4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
TYK28556.1	4.39e-70	81.88	glutaredoxin-C4-like [Cucumis melo var. makuwa]	[more]

BLAST of Cp4.1LG18g06510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JA45	3.19e-88	98.55	glutaredoxin-C4-like OS=Cucurbita maxima OX=3661 GN=LOC111484927 PE=3 SV=1	[more]
A0A6J1E059	3.19e-88	98.55	glutaredoxin-C4-like OS=Cucurbita moschata OX=3662 GN=LOC111429636 PE=3 SV=1	[more]
A0A5D3DXQ7	2.13e-70	81.88	Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629...	[more]
A0A0A0LXH3	3.02e-70	81.16	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G42752...	[more]
A0A5A7UQP8	1.23e-69	81.16	Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274...	[more]

BLAST of Cp4.1LG18g06510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20500.1	1.8e-40	57.78	Glutaredoxin family protein	[more]
AT1G77370.1	1.3e-30	52.85	Glutaredoxin family protein	[more]
AT2G20270.1	1.8e-19	40.74	Thioredoxin superfamily protein	[more]
AT5G40370.1	1.9e-18	46.67	Glutaredoxin family protein	[more]
AT5G63030.1	7.4e-18	43.33	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 47..65 score: 47.81 coord: 92..105 score: 51.79 coord: 106..119 score: 43.45
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 47..109 e-value: 3.5E-20 score: 72.0
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 32..137 e-value: 3.2E-38 score: 131.8
None	No IPR available	PIRSR	PIRSR001488-1	PIRSR001488-1	coord: 7..66 e-value: 0.13 score: 9.7
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 8..125
None	No IPR available	PANTHER	PTHR45694:SF19	BNAA02G04900D PROTEIN	coord: 8..125
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 35..135 score: 23.710058
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 47..127 e-value: 8.01355E-47 score: 144.219
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 47..128 e-value: 6.4E-31 score: 104.4
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 49..64
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 37..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g06510.1	Cp4.1LG18g06510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008794	arsenate reductase (glutaredoxin) activity
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity