Cp4.1LG18g06380 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG18g06380
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Basic helix-loop-helix transcription factor
Location	Cp4.1LG18: 6587133 .. 6591104 (-)
RNA-Seq Expression	Cp4.1LG18g06380
Synteny	Cp4.1LG18g06380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGTGAGTCAAGCGAAACCGAGTAAAGAAATGGAAGAATTATTCGCGAGGCCTTGTGGACGGTCAAGATCTTTCCAAGAAACATCAAGACTACATAGTTCACACACACGTGTGTGGTGATTGGAATTTATGTGCGTCGCAGGTAACTCTAGCATTTCTGTTTGTCTATATATAACGATCACACATGAAATTCCATCCATGCCCAAGTTCAGATGCTCAAAGTGATCGTGGACATAAAATTACGATTTTATTTGTTTTTTATTTCCCTAGAAGAGAAAGGAAGGGGGAAAAAACTCTCTCCGTCGAAGCAAGAATCTGATAACGCCGCCGCCGCCGCCGGGATATGGATAGTTTCGGAAACGATTGCATGAATTACTTCGGGAGTGATATCTTCATACCAACGGAAGAGCTCGACAGGTCTTTTATTTTTGCTCTACTTCTGTATTTTCTGTCTTTTGAAAATGTTGATCTGTGGAGTGAGGATTCAGGGAATTTGTAACTCGAATTTGACGCCGGTGTTTTGATTAAGAAAGTTGGGGATTCGACGAGCCGGTTTCCGGATACTACGATTCGAGTTCGCCGGAGGGAGTTCTGTCGTCGTCGTCGGCTACGAAGAACATAGCATCGGAGAGGAATAGGAGAAGGAAGCTTAACGAGAGGCTTTTTGCGCTCCGATCGGTCGTTCCTAATATAACTAAGGTTAGGATCGAGTTACTTGTGTTCGATTTCCGTAATTAGTTCATAGCTCTCTTTTTGGAGTTCTGGATTTTGAAATTAATCAATCGAGAAATGGATTGAGCAGATGGATAAGGCTTCCATTATAAAAGATGCAATCGATTACATCCAAAATTTACATGAGCAAGAGAGGAGGGTTCAAACTGAAATTTCCGAGCTCGAATCAGGAAAGTTTAAGATAACAGGGTGTGAATTTGACCAGGAGATTCCCTTGTTGCTCAGACCTAAGAGGAAGAAAACTGAGAAGTACTTCAGCTATGGATCTCCTGCTTCAAGAACTTCCCCCATTGAAGTCCAGGATGTAAGTTTTCTCCTCTCTAGCTCTCCTTAAAATTTTCAACAAATCAATTGATTTAGGGATTTTGAATTGAGGGGAATGTGAATTGCAGCTTAGTGTAACATACATGGGGGGCAGAACATTAGCGGTGAGCATGACATGCTGCAAAAGAGCAGATTCAATGGTTAAACTCTGTGAAGTTTTTGAATCACTGAAGCTCAAGATCATCACTGCCAATATTTCTGCTGTCTCTGGAAGGCTTTTGAAGACTGTCTTCATTGAGGTAACTACCTTCTCCCCTCTTGATATTCCATCAAATTAAATGAATCCGCTCCCTAACATGAATTCAAAAATCTGTATATTCCCTAATAGCCACTAGAATTTGGTACACTTGAGACATCTAACAGTGAAAAACGTGTCTGCTTCACCAAATAAAATAATTTCCCCCTCTTTTTGTTCTAAGAAATCCAAACTGAGTCAGCTGAATCAAGTCAATACAAACAAATAAATGGAGAAGTGTTTTAAAGAGGAAAAGTAGGAAATTGGGGGCCCTTGCTAGGAATTTGGGCATGTTTTCTGGGATCTTTGAACCATTGAGATACAATAATCGTAAGCCATGTGCTACCGTACACATAGGCATAATGGATCCTCAAAATTTGGGTGGTCTTAGTGGAATGCTTCTTTTTCTTCGTTAGCCTTTGTTATTATCATGTCCCTTTCTTTGACCAGTTTTGTGCTGTGCCTCGTTTATTTTGTGGGTCGAATTTAAAATGTGCTTTAAAGTTATTCTCTCTCTTTTTTTGCTTAATTTTCTCTCAAGGGTGCATAAAATATTTTGATTTTTTAATTTAATGATATTTAAATATTTTTTTTTAAATTTATTCAACTTATGGATAATATGGGTTTATGGTTGTGGATAACTGTTTTTAAAAATTGCTTTGAATAATTTATCCGACAAGCAATCATTTTTCCTTTATCCGTGGGCCAGACTGTCTAATGTCTCTTTTTTTTTTTTTAGCTCAACTTGTGTCCTTATGTTTGGTTCTTTTTTAAAAAATAAAGTGCCACATTTTGTTATTCATTTAGAAATAATTCCAAAATTGTATAAGGAATAAATTATATTTTAGAAATAATCTCTTAATGGTATAGAAAATCTAAAAACTAAACCATCTATCACAATCGACTCCATTTTGAAAAATGAAAAAACAAACGACTAAAAAAATACAGGGTTAGAGAAAAAGGTGAACCACATGAAATTTGTGAGTATTCATGTTTGAAACTCTATTTTCCATTGAAATTTTCTTTTTCATTGAAATACTAAATATGAAGATCTTTGAAGATCTTCTAATTTCTTTTTTATTATTTATTTTAATTTTGAATTCAGCAAAATGGGTAGAAATTCAAACTTTTAGCCTCTCGGTCAAAAATTGAACTCATCTTCATTTTAGTTAGAAATTGGGAGAAATTGGGAGGTGTTTTCATTTTTAAAAGGCACTTAAAAGTACAGCACAAAATGGGGCATAGACTACGTTTTGATTGATTTTGAATGAAGAAAGTTAGAAGAGGTGGGTCTATGATAGCTGTTCATCCAGACAAAGGTAAAATTATAGGAAACAAAAGATATTATATGCAAATAAAGAACGGGACAGAATTAACTGTGGACTCATTGTCAATAAAGCCCCTTAAACAAAGTGGAAGATCCAGTTGTGATGCAATTTTGGTGAGGTTGGTAATGACAGCATTTTGCCATTACCTCACCTCACCATCCCCACACCTTTGGAAAATGTAATTTTGTTGACACACTTTTAATGATTGTGCTTTCAATTATATGAACTTTTCATGTTCAGCTACTGGTAAGTTTATATTACATTAATAAGGTTTTTATATTTTCTGGAGCTAACTGCATATAGGTGTCTTTGTCACAAGGCAGGGAATTATATAGATATACCTCTCCAACCATGTTGATAGATAGTACACAACTCTAGCGCACATTTTGATTGGATCATTTATTAGGAACAATGAAATAAAAAAACAAGTAGTTTGTTGATTAATTAACCTAGAAGAATAGTTACAGCCCCATTTTAAGCCTTGTGGAGCCATCAATTTTGTGGTTTTTACTCACTTTAGCAATATTAGATAATGATTGGTACAAAAATCTCAAAAAAAATATTATGATTAGCAATATTAGTGTTCCTACTTTAGATAGTTATGATTAGCTTTAGCTTTCACTATCTTCTAGAGAGGAAAAAAGAGAAACAGGAAAGAAAATGGTAATAATTGATGTTGTTGTGCCACTTAACTGTGTCTAAATCGGCTTAAGAAGAATCCAAAACCCTTCCCAAGACGAACTCCAAGATCTAATTAAAATTATCCTTTGTTCTGGAATTGCAGGCTGAGAAAGAGGAGAGGGATTACTTGAAAATTAAAATAGAAACAGCAATTGCAGGTCTTAATGATCCACATAGCCCCATGAGCATCTGAGAGTTGGAAACTGGTTCTCTCACACTCCCTGATCAGAGTTTTCCATTTTGCTCTTTCTTGGGGTTGTCGTCATGTCACATGATTTGTTTTCCTTGATGAGAGAGTTCTCCTTTCAGGAGTTTCCGAGAGTTCTTTTCTTGGTCCAAGAAGATATCAAATGTAAGAGTGTAGAATCTTCCATGTATAATTGTCCATGTCGAATGGTTTCATGAGTATCAACACAATTATGTGCTTGAGTTTCTATATTTTCTGGATCTACGATATTCCTCAATCATCATCAAGATTGCAATATATCCAAATTCTCGACACTTTTTTATGAAAACGAAGAGTCAACTTCGCCTATTCAACCAATCTGTAATACTGGGAGTGTGACATAATAAGAGAAGATATTGAAATTGGTCGACATACCTCAGGAATGGTTTGAACTCCTATTGTTTCACCTTGATGTACGAAGCGACCATCTAAGGATAAAAGATAAG

mRNA sequence

CAGGTGAGTCAAGCGAAACCGAGTAAAGAAATGGAAGAATTATTCGCGAGGCCTTGTGGACGGTCAAGATCTTTCCAAGAAACATCAAGACTACATAGTTCACACACACGTGTGTGGTGATTGGAATTTATGTGCGTCGCAGGTAACTCTAGCATTTCTGTTTGTCTATATATAACGATCACACATGAAATTCCATCCATGCCCAAGTTCAGATGCTCAAAGTGATCGTGGACATAAAATTACGATTTTATTTGTTTTTTATTTCCCTAGAAGAGAAAGGAAGGGGGAAAAAACTCTCTCCGTCGAAGCAAGAATCTGATAACGCCGCCGCCGCCGCCGGGATATGGATAGTTTCGGAAACGATTGCATGAATTACTTCGGGAGTGATATCTTCATACCAACGGAAGAGCTCGACAGTTGGGGATTCGACGAGCCGGTTTCCGGATACTACGATTCGAGTTCGCCGGAGGGAGTTCTGTCGTCGTCGTCGGCTACGAAGAACATAGCATCGGAGAGGAATAGGAGAAGGAAGCTTAACGAGAGGCTTTTTGCGCTCCGATCGGTCGTTCCTAATATAACTAAGATGGATAAGGCTTCCATTATAAAAGATGCAATCGATTACATCCAAAATTTACATGAGCAAGAGAGGAGGGTTCAAACTGAAATTTCCGAGCTCGAATCAGGAAAGTTTAAGATAACAGGGTGTGAATTTGACCAGGAGATTCCCTTGTTGCTCAGACCTAAGAGGAAGAAAACTGAGAAGTACTTCAGCTATGGATCTCCTGCTTCAAGAACTTCCCCCATTGAAGTCCAGGATCTTAGTGTAACATACATGGGGGGCAGAACATTAGCGGTGAGCATGACATGCTGCAAAAGAGCAGATTCAATGGTTAAACTCTGTGAAGTTTTTGAATCACTGAAGCTCAAGATCATCACTGCCAATATTTCTGCTGTCTCTGGAAGGCTTTTGAAGACTGTCTTCATTGAGGCTGAGAAAGAGGAGAGGGATTACTTGAAAATTAAAATAGAAACAGCAATTGCAGGTCTTAATGATCCACATAGCCCCATGAGCATCTGAGAGTTGGAAACTGGTTCTCTCACACTCCCTGATCAGAGTTTTCCATTTTGCTCTTTCTTGGGGTTGTCGTCATGTCACATGATTTGTTTTCCTTGATGAGAGAGTTCTCCTTTCAGGAGTTTCCGAGAGTTCTTTTCTTGGTCCAAGAAGATATCAAATGTAAGAGTGTAGAATCTTCCATGTATAATTGTCCATGTCGAATGGTTTCATGAGTATCAACACAATTATGTGCTTGAGTTTCTATATTTTCTGGATCTACGATATTCCTCAATCATCATCAAGATTGCAATATATCCAAATTCTCGACACTTTTTTATGAAAACGAAGAGTCAACTTCGCCTATTCAACCAATCTGTAATACTGGGAGTGTGACATAATAAGAGAAGATATTGAAATTGGTCGACATACCTCAGGAATGGTTTGAACTCCTATTGTTTCACCTTGATGTACGAAGCGACCATCTAAGGATAAAAGATAAG

Coding sequence (CDS)

ATGGATAGTTTCGGAAACGATTGCATGAATTACTTCGGGAGTGATATCTTCATACCAACGGAAGAGCTCGACAGTTGGGGATTCGACGAGCCGGTTTCCGGATACTACGATTCGAGTTCGCCGGAGGGAGTTCTGTCGTCGTCGTCGGCTACGAAGAACATAGCATCGGAGAGGAATAGGAGAAGGAAGCTTAACGAGAGGCTTTTTGCGCTCCGATCGGTCGTTCCTAATATAACTAAGATGGATAAGGCTTCCATTATAAAAGATGCAATCGATTACATCCAAAATTTACATGAGCAAGAGAGGAGGGTTCAAACTGAAATTTCCGAGCTCGAATCAGGAAAGTTTAAGATAACAGGGTGTGAATTTGACCAGGAGATTCCCTTGTTGCTCAGACCTAAGAGGAAGAAAACTGAGAAGTACTTCAGCTATGGATCTCCTGCTTCAAGAACTTCCCCCATTGAAGTCCAGGATCTTAGTGTAACATACATGGGGGGCAGAACATTAGCGGTGAGCATGACATGCTGCAAAAGAGCAGATTCAATGGTTAAACTCTGTGAAGTTTTTGAATCACTGAAGCTCAAGATCATCACTGCCAATATTTCTGCTGTCTCTGGAAGGCTTTTGAAGACTGTCTTCATTGAGGCTGAGAAAGAGGAGAGGGATTACTTGAAAATTAAAATAGAAACAGCAATTGCAGGTCTTAATGATCCACATAGCCCCATGAGCATCTGA

Protein sequence

MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNRRRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKITGCEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKRADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHSPMSI

Homology

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BLAST of Cp4.1LG18g06380 vs. ExPASy Swiss-Prot
Match: Q2HIV9 (Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.6e-57
Identity = 128/243 (52.67%), Postives = 168/243 (69.14%), Query Frame = 0


Query: 2   DSFGNDCMNYFGSDIFIPTEELD---SWGFDEPVSGYYDSSSPEGVLSSSSATKNIASER 61
           D    +  NY+    F+  E+ +   SW  +E +SG YDSSSP+G  +SS A+KNI SER
Sbjct: 3   DIVDQELSNYWEPSSFLQNEDFEYDRSWPLEEAISGSYDSSSPDGA-ASSPASKNIVSER 62

Query: 62  NRRRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKI 121
           NRR+KLN+RLFALRSVVPNITKMDKASIIKDAI YI+ L  +E++++ EI ELES     
Sbjct: 63  NRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSS 122

Query: 122 TGCEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKR 181
                D +  LL+    KK ++  S     S TS IEV +L VT+MG RT+ VS+TC KR
Sbjct: 123 LSFSKDFDRDLLVPVTSKKMKQLDS----GSSTSLIEVLELKVTFMGERTMVVSVTCNKR 182

Query: 182 ADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDP 241
            D+MVKLCEVFESL LKI+T+N+++ SG +  TVFIEA++EE++ L++KIET I   N+ 
Sbjct: 183 TDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEVLRLKIETGIGAYNET 240

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BLAST of Cp4.1LG18g06380 vs. ExPASy Swiss-Prot
Match: Q700E3 (Transcription factor bHLH27 OS=Arabidopsis thaliana OX=3702 GN=BHLH27 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 7.4e-42
Identity = 97/225 (43.11%), Postives = 144/225 (64.00%), Query Frame = 0


Query: 1   MDSFGNDCMNYFGSDIFIPTEEL--DSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASER 60
           M+   ++  NY+ + +F   +EL  DSW  +E  SG  +SSSP+G  +S +++KN+ SER
Sbjct: 1   MEDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSER 60

Query: 61  NRRRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKI 120
           NRR+KLN+RLFALRSVVPNI+K+DKAS+IKD+IDY+Q L +QE+ ++ EI ELES    +
Sbjct: 61  NRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLL 120

Query: 121 TG------CEFDQEIPLLLRPKRKKTEKYFSYGSPASRTS--PIEVQDLSVTYMGGRTLA 180
                   C F +              K F     ++R    PIEV ++ VT+MG +T+ 
Sbjct: 121 ENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEKTVV 180

Query: 181 VSMTCCKRADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIE 216
           V +TC K+ ++MV+LC+V ESL L I+T N S+ + RL  T+F++
Sbjct: 181 VCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQ 225

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BLAST of Cp4.1LG18g06380 vs. ExPASy Swiss-Prot
Match: Q0JEB7 (Transcription factor BHLH6 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH6 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.9e-38
Identity = 108/301 (35.88%), Postives = 158/301 (52.49%), Query Frame = 0


Query: 3   SFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSS------------- 62
           + G     Y+ +  ++ +EELDS          Y+SSSP+G  SSS+             
Sbjct: 6   AMGESFAYYWETQRYLESEELDSMYLPTQDDSNYESSSPDGSHSSSAPAPAAVGGDAAAA 65

Query: 63  -------------------------ATKNIASERNRRRKLNERLFALRSVVPNITKMDKA 122
                                    A KNI  ER+RRRKLNE+L+ALRSVVPNITKMDKA
Sbjct: 66  VAGSGGGMTTMMMGGGGGGGDDAGGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKA 125

Query: 123 SIIKDAIDYIQNLHEQERRVQTEISELES-----------GKFKITGCEFDQEI----PL 182
           SIIKDAI+YIQ L  +E+++  E++ LES             F   G + + E     P 
Sbjct: 126 SIIKDAIEYIQRLQAEEQQMLREVAALESAAAASAAPAAANPFAGLGADEEHEYGHHHPS 185

Query: 183 LLRPKRKKTEKYFSYGS-------PASRTSPIEVQDLSVTYMGGRTLAVSMTCCKRADSM 242
               + KK ++  S  S        A+   P+E+Q+L V+ +G R L VS+TC KR D+M
Sbjct: 186 SSSERTKKVKRALSVSSISDALLAAAAPAPPVEIQELRVSEVGDRVLVVSVTCSKRRDAM 245

Query: 243 VKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHSPM 244
            ++C   E L+L++ITANI++V+G L+ T+F+E +  +   +K  +E A++ L    SP+
Sbjct: 246 ARVCRALEELRLRVITANITSVAGCLMHTLFVEVDHMDSVQMKQMVEAALSQLVATGSPL 305

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BLAST of Cp4.1LG18g06380 vs. ExPASy Swiss-Prot
Match: Q9LSE2 (Transcription factor ICE1 OS=Arabidopsis thaliana OX=3702 GN=SCRM PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.8e-14
Identity = 58/183 (31.69%), Postives = 94/183 (51.37%), Query Frame = 0


Query: 52  KNIASERNRRRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISEL 111
           KN+ +ER RR+KLN+RL+ LRSVVP I+KMD+ASI+ DAIDY++ L ++   +  E+   
Sbjct: 307 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELEST 366

Query: 112 ESGKFKITGCEFD--QEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTL 171
             G    T   F      P  L  + K+     S  SP  + + +EV+        GR +
Sbjct: 367 PPGSLPPTSSSFHPLTPTPQTLSCRVKEELCPSSLPSPKGQQARVEVR-----LREGRAV 426

Query: 172 AVSMTCCKRADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIE 231
            + M C +R   ++   +  ++L L +  A IS  +G  L     E  +E ++ L  +I+
Sbjct: 427 NIHMFCGRRPGLLLATMKALDNLGLDVQQAVISCFNGFALDVFRAEQCQEGQEILPDQIK 484

Query: 232 TAI 233
             +
Sbjct: 487 AVL 484

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BLAST of Cp4.1LG18g06380 vs. ExPASy Swiss-Prot
Match: Q9LPW3 (Transcription factor SCREAM2 OS=Arabidopsis thaliana OX=3702 GN=SCRM2 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.2e-13
Identity = 58/185 (31.35%), Postives = 92/185 (49.73%), Query Frame = 0


Query: 52  KNIASERNRRRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISEL 111
           KN+ +ER RR+KLN+RL+ LRSVVP I+KMD+ASI+ DAIDY++ L ++   + TE+   
Sbjct: 267 KNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELEST 326

Query: 112 ESGKFKITGCEFDQEIPLLLRPK----RKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGR 171
                 +         PL   P+    R K E   S   P+ +     V+   V    G+
Sbjct: 327 PPSSSSLH--------PLTPTPQTLSYRVKEELCPSSSLPSPKGQQPRVE---VRLREGK 386

Query: 172 TLAVSMTCCKRADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIK 231
            + + M C +R   ++      ++L L +  A IS  +G  L     E  +E+ D L  +
Sbjct: 387 AVNIHMFCGRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCQEDHDVLPEQ 440

Query: 232 IETAI 233
           I+  +
Sbjct: 447 IKAVL 440

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BLAST of Cp4.1LG18g06380 vs. NCBI nr
Match: XP_023515836.1 (transcription factor bHLH35-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 473 bits (1216), Expect = 8.22e-168
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60
           MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR
Sbjct: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60

Query: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKITG 120
           RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKITG
Sbjct: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKITG 120

Query: 121 CEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKRAD 180
           CEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKRAD
Sbjct: 121 CEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKRAD 180

Query: 181 SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS 240
           SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS
Sbjct: 181 SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS 240

Query: 241 PMSI 244
           PMSI
Sbjct: 241 PMSI 244

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BLAST of Cp4.1LG18g06380 vs. NCBI nr
Match: XP_022922024.1 (transcription factor bHLH35-like [Cucurbita moschata] >KAG6589686.1 Transcription factor basic helix-loop-helix 35, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023366.1 Transcription factor bHLH35, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 466 bits (1200), Expect = 2.26e-165
Identity = 240/244 (98.36%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60
           MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR
Sbjct: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60

Query: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKITG 120
           RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQ+LHEQERRVQTEISELESGKFKITG
Sbjct: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQDLHEQERRVQTEISELESGKFKITG 120

Query: 121 CEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKRAD 180
           CEFDQE+PLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMG RT+AVSMTCCKRAD
Sbjct: 121 CEFDQELPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGDRTIAVSMTCCKRAD 180

Query: 181 SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS 240
           SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS
Sbjct: 181 SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS 240

Query: 241 PMSI 244
           PMSI
Sbjct: 241 PMSI 244

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BLAST of Cp4.1LG18g06380 vs. NCBI nr
Match: XP_022987353.1 (transcription factor bHLH35-like [Cucurbita maxima])

HSP 1 Score: 464 bits (1195), Expect = 1.31e-164
Identity = 239/244 (97.95%), Postives = 242/244 (99.18%), Query Frame = 0


Query: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60
           MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR
Sbjct: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60

Query: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKITG 120
           RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQ+LHEQERRVQTEISELESGKFKITG
Sbjct: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQDLHEQERRVQTEISELESGKFKITG 120

Query: 121 CEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKRAD 180
           CEFDQE+PLLLRPKR KTEKYFSYGSPASRTSPIEVQDLSVTYMG RT+AVSMTCCKRAD
Sbjct: 121 CEFDQELPLLLRPKRNKTEKYFSYGSPASRTSPIEVQDLSVTYMGDRTIAVSMTCCKRAD 180

Query: 181 SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS 240
           SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS
Sbjct: 181 SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS 240

Query: 241 PMSI 244
           PMSI
Sbjct: 241 PMSI 244

[Close]

BLAST of Cp4.1LG18g06380 vs. NCBI nr
Match: XP_038878728.1 (transcription factor bHLH35-like isoform X1 [Benincasa hispida])

HSP 1 Score: 372 bits (956), Expect = 3.28e-128
Identity = 201/246 (81.71%), Postives = 216/246 (87.80%), Query Frame = 0


Query: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60
           MD  G D  N  G+DIFI TEE  SWGFDEPVSGYYDSSSP+    SSSA+KN  SERNR
Sbjct: 1   MDCIGEDYYNSLGTDIFIATEEPGSWGFDEPVSGYYDSSSPDP---SSSASKNTVSERNR 60

Query: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFK-IT 120
           R+KLNERLFALRSVVPNITKMDKASIIKDAIDYIQ LH+QERR+Q EI ELE+GK K IT
Sbjct: 61  RKKLNERLFALRSVVPNITKMDKASIIKDAIDYIQELHDQERRIQAEIYELETGKLKKIT 120

Query: 121 GCEFDQE-IPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKR 180
           G EFDQ+ +PLLLR KRKKT+ YFS+ SPASR SP+EV DLSVTYMG RT+ VSMTCCKR
Sbjct: 121 GYEFDQDQLPLLLRSKRKKTDPYFSFDSPASRISPVEVLDLSVTYMGDRTIVVSMTCCKR 180

Query: 181 ADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDP 240
           ADSMVKLCEVFESLKLKIITANI+AVSGRLLKTVFIEAE+EERDYLKIKIETAIAGLNDP
Sbjct: 181 ADSMVKLCEVFESLKLKIITANITAVSGRLLKTVFIEAEQEERDYLKIKIETAIAGLNDP 240

Query: 241 HSPMSI 244
           HSPMSI
Sbjct: 241 HSPMSI 243

[Close]

BLAST of Cp4.1LG18g06380 vs. NCBI nr
Match: XP_022135507.1 (transcription factor bHLH35-like [Momordica charantia])

HSP 1 Score: 367 bits (943), Expect = 3.48e-126
Identity = 199/247 (80.57%), Postives = 220/247 (89.07%), Query Frame = 0


Query: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60
           MD+ G D   Y+ ++I +P EE+DSWG DE +SGYYDSSSPEGVLSSS+A+KNI SERNR
Sbjct: 1   MDNIGEDYSYYWETNIVLPAEEIDSWGLDEAISGYYDSSSPEGVLSSSAASKNILSERNR 60

Query: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFK-IT 120
           RRKLNERLFALRSVVPNITKMDKASIIKDAI+YIQ+LHEQERR+Q EI E+ESGKFK IT
Sbjct: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAINYIQDLHEQERRIQAEIYEIESGKFKNIT 120

Query: 121 GCEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKRA 180
           G  FDQE+PLLLR KRKKTE+ FSY S ASRTSPIEV DLSVTYMG RT+ VS+TCCKRA
Sbjct: 121 GYGFDQELPLLLRSKRKKTEQ-FSYDSAASRTSPIEVLDLSVTYMGERTMVVSLTCCKRA 180

Query: 181 DSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIA--GLND 240
           DSMVKLCEVFESLKLKIITANI+AVSGRLLKTVFIEAE+EERDYLKIKIE+AIA   L+D
Sbjct: 181 DSMVKLCEVFESLKLKIITANITAVSGRLLKTVFIEAEQEERDYLKIKIESAIARLSLSD 240

Query: 241 PHSPMSI 244
           P SPMSI
Sbjct: 241 PQSPMSI 246

[Close]

BLAST of Cp4.1LG18g06380 vs. ExPASy TrEMBL
Match: A0A6J1E262 (transcription factor bHLH35-like OS=Cucurbita moschata OX=3662 GN=LOC111430100 PE=4 SV=1)

HSP 1 Score: 466 bits (1200), Expect = 1.09e-165
Identity = 240/244 (98.36%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60
           MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR
Sbjct: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60

Query: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKITG 120
           RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQ+LHEQERRVQTEISELESGKFKITG
Sbjct: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQDLHEQERRVQTEISELESGKFKITG 120

Query: 121 CEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKRAD 180
           CEFDQE+PLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMG RT+AVSMTCCKRAD
Sbjct: 121 CEFDQELPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGDRTIAVSMTCCKRAD 180

Query: 181 SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS 240
           SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS
Sbjct: 181 SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS 240

Query: 241 PMSI 244
           PMSI
Sbjct: 241 PMSI 244

[Close]

BLAST of Cp4.1LG18g06380 vs. ExPASy TrEMBL
Match: A0A6J1JJ79 (transcription factor bHLH35-like OS=Cucurbita maxima OX=3661 GN=LOC111484933 PE=4 SV=1)

HSP 1 Score: 464 bits (1195), Expect = 6.33e-165
Identity = 239/244 (97.95%), Postives = 242/244 (99.18%), Query Frame = 0


Query: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60
           MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR
Sbjct: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60

Query: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKITG 120
           RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQ+LHEQERRVQTEISELESGKFKITG
Sbjct: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQDLHEQERRVQTEISELESGKFKITG 120

Query: 121 CEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKRAD 180
           CEFDQE+PLLLRPKR KTEKYFSYGSPASRTSPIEVQDLSVTYMG RT+AVSMTCCKRAD
Sbjct: 121 CEFDQELPLLLRPKRNKTEKYFSYGSPASRTSPIEVQDLSVTYMGDRTIAVSMTCCKRAD 180

Query: 181 SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS 240
           SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS
Sbjct: 181 SMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPHS 240

Query: 241 PMSI 244
           PMSI
Sbjct: 241 PMSI 244

[Close]

BLAST of Cp4.1LG18g06380 vs. ExPASy TrEMBL
Match: A0A6J1C2W6 (transcription factor bHLH35-like OS=Momordica charantia OX=3673 GN=LOC111007447 PE=4 SV=1)

HSP 1 Score: 367 bits (943), Expect = 1.69e-126
Identity = 199/247 (80.57%), Postives = 220/247 (89.07%), Query Frame = 0


Query: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60
           MD+ G D   Y+ ++I +P EE+DSWG DE +SGYYDSSSPEGVLSSS+A+KNI SERNR
Sbjct: 1   MDNIGEDYSYYWETNIVLPAEEIDSWGLDEAISGYYDSSSPEGVLSSSAASKNILSERNR 60

Query: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFK-IT 120
           RRKLNERLFALRSVVPNITKMDKASIIKDAI+YIQ+LHEQERR+Q EI E+ESGKFK IT
Sbjct: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAINYIQDLHEQERRIQAEIYEIESGKFKNIT 120

Query: 121 GCEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKRA 180
           G  FDQE+PLLLR KRKKTE+ FSY S ASRTSPIEV DLSVTYMG RT+ VS+TCCKRA
Sbjct: 121 GYGFDQELPLLLRSKRKKTEQ-FSYDSAASRTSPIEVLDLSVTYMGERTMVVSLTCCKRA 180

Query: 181 DSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIA--GLND 240
           DSMVKLCEVFESLKLKIITANI+AVSGRLLKTVFIEAE+EERDYLKIKIE+AIA   L+D
Sbjct: 181 DSMVKLCEVFESLKLKIITANITAVSGRLLKTVFIEAEQEERDYLKIKIESAIARLSLSD 240

Query: 241 PHSPMSI 244
           P SPMSI
Sbjct: 241 PQSPMSI 246

[Close]

BLAST of Cp4.1LG18g06380 vs. ExPASy TrEMBL
Match: A0A1S3BWL7 (transcription factor bHLH35 OS=Cucumis melo OX=3656 GN=LOC103494233 PE=4 SV=1)

HSP 1 Score: 364 bits (934), Expect = 1.21e-124
Identity = 198/246 (80.49%), Postives = 215/246 (87.40%), Query Frame = 0


Query: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60
           MDS G+D +N  G+DIFI  EELDSW  +EP+S YYDSSSP+G    S+A+KNI SERNR
Sbjct: 1   MDSIGDDYLNSLGTDIFIG-EELDSWALEEPLSAYYDSSSPDG----SAASKNIVSERNR 60

Query: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFK-IT 120
           RRKLNERLFALRSVVPNITKMDKASIIKDAIDYI +LH+QERR+Q EI ELESG  K IT
Sbjct: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGTLKKIT 120

Query: 121 GCEFDQE-IPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKR 180
           G EFDQ+ +PLLLR KRKKTE+Y SY SP SR SPIEV DLSVTYMG RT+ VSMTCCKR
Sbjct: 121 GYEFDQDQLPLLLRSKRKKTEQYLSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKR 180

Query: 181 ADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDP 240
           ADSMVKLCEVFESLKLKIITANI+ VSGRLLKTVFIEAE+EERDYLKIKIETAIAGLNDP
Sbjct: 181 ADSMVKLCEVFESLKLKIITANITTVSGRLLKTVFIEAEQEERDYLKIKIETAIAGLNDP 240

Query: 241 HSPMSI 244
           HSPMSI
Sbjct: 241 HSPMSI 241

[Close]

BLAST of Cp4.1LG18g06380 vs. ExPASy TrEMBL
Match: A0A0A0LU95 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G425940 PE=4 SV=1)

HSP 1 Score: 362 bits (930), Expect = 1.35e-124
Identity = 198/246 (80.49%), Postives = 217/246 (88.21%), Query Frame = 0


Query: 1   MDSFGNDCMNYFGSDIFIPTEELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERNR 60
           MD  G+D +N FG++IFI  EELDSWG +EP SG YDSSSP+G    S+A+KN+ASERNR
Sbjct: 1   MDIIGDDYLNPFGNEIFIG-EELDSWGLEEPFSGDYDSSSPDG----SAASKNVASERNR 60

Query: 61  RRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFK-IT 120
           RRKLNERLFALRSVVPNI+KMDKASIIKDAIDYI +LH+QERR+Q EI ELESGK K IT
Sbjct: 61  RRKLNERLFALRSVVPNISKMDKASIIKDAIDYIHDLHDQERRIQAEIYELESGKLKKIT 120

Query: 121 GCEFDQE-IPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKR 180
           G EFDQ+ +PLLLR KRKKTE+YFSY SP SR SPIEV DLSVTYMG RT+ VSMTCCKR
Sbjct: 121 GYEFDQDQLPLLLRSKRKKTEQYFSYDSPVSRISPIEVLDLSVTYMGDRTIVVSMTCCKR 180

Query: 181 ADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDP 240
           ADSMVKLCEVFESL LKIITANI+AVSGRLLKTVFIEAE+EERD LKIKIETAIAGLNDP
Sbjct: 181 ADSMVKLCEVFESLNLKIITANITAVSGRLLKTVFIEAEQEERDCLKIKIETAIAGLNDP 240

Query: 241 HSPMSI 244
           HSPMSI
Sbjct: 241 HSPMSI 241

[Close]

BLAST of Cp4.1LG18g06380 vs. TAIR 10
Match: AT5G57150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 226.9 bits (577), Expect = 1.8e-59
Identity = 130/242 (53.72%), Postives = 168/242 (69.42%), Query Frame = 0


Query: 2   DSFGNDCMNYFGSDIFIPTE--ELDSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASERN 61
           D    +  NY+    F+  E  E DSW  +E +SG YDSSSP+G  +SS A+KNI SERN
Sbjct: 3   DIVDQELSNYWEPSSFLQNEDFEYDSWPLEEAISGSYDSSSPDGA-ASSPASKNIVSERN 62

Query: 62  RRRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKIT 121
           RR+KLN+RLFALRSVVPNITKMDKASIIKDAI YI+ L  +E++++ EI ELES      
Sbjct: 63  RRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSSL 122

Query: 122 GCEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKRA 181
               D +  LL+    KK ++  S     S TS IEV +L VT+MG RT+ VS+TC KR 
Sbjct: 123 SFSKDFDRDLLVPVTSKKMKQLDS----GSSTSLIEVLELKVTFMGERTMVVSVTCNKRT 182

Query: 182 DSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIETAIAGLNDPH 241
           D+MVKLCEVFESL LKI+T+N+++ SG +  TVFIEA++EE++ L++KIET I   N+  
Sbjct: 183 DTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEVLRLKIETGIGAYNETQ 239

[Close]

BLAST of Cp4.1LG18g06380 vs. TAIR 10
Match: AT5G57150.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 198.0 bits (502), Expect = 8.9e-51
Identity = 116/217 (53.46%), Postives = 149/217 (68.66%), Query Frame = 0


Query: 2   DSFGNDCMNYFGSDIFIPTEELD---SWGFDEPVSGYYDSSSPEGVLSSSSATKNIASER 61
           D    +  NY+    F+  E+ +   SW  +E +SG YDSSSP+G  +SS A+KNI SER
Sbjct: 3   DIVDQELSNYWEPSSFLQNEDFEYDRSWPLEEAISGSYDSSSPDGA-ASSPASKNIVSER 62

Query: 62  NRRRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKI 121
           NRR+KLN+RLFALRSVVPNITKMDKASIIKDAI YI+ L  +E++++ EI ELES     
Sbjct: 63  NRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSS 122

Query: 122 TGCEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKR 181
                D +  LL+    KK ++  S     S TS IEV +L VT+MG RT+ VS+TC KR
Sbjct: 123 LSFSKDFDRDLLVPVTSKKMKQLDS----GSSTSLIEVLELKVTFMGERTMVVSVTCNKR 182

Query: 182 ADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIE 216
            D+MVKLCEVFESL LKI+T+N+++ SG +  TVFIE
Sbjct: 183 TDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIE 214

[Close]

BLAST of Cp4.1LG18g06380 vs. TAIR 10
Match: AT5G57150.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 198.0 bits (502), Expect = 8.9e-51
Identity = 116/217 (53.46%), Postives = 149/217 (68.66%), Query Frame = 0


Query: 2   DSFGNDCMNYFGSDIFIPTEELD---SWGFDEPVSGYYDSSSPEGVLSSSSATKNIASER 61
           D    +  NY+    F+  E+ +   SW  +E +SG YDSSSP+G  +SS A+KNI SER
Sbjct: 3   DIVDQELSNYWEPSSFLQNEDFEYDRSWPLEEAISGSYDSSSPDGA-ASSPASKNIVSER 62

Query: 62  NRRRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKI 121
           NRR+KLN+RLFALRSVVPNITKMDKASIIKDAI YI+ L  +E++++ EI ELES     
Sbjct: 63  NRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSS 122

Query: 122 TGCEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKR 181
                D +  LL+    KK ++  S     S TS IEV +L VT+MG RT+ VS+TC KR
Sbjct: 123 LSFSKDFDRDLLVPVTSKKMKQLDS----GSSTSLIEVLELKVTFMGERTMVVSVTCNKR 182

Query: 182 ADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIE 216
            D+MVKLCEVFESL LKI+T+N+++ SG +  TVFIE
Sbjct: 183 TDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIE 214

[Close]

BLAST of Cp4.1LG18g06380 vs. TAIR 10
Match: AT5G57150.4 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 198.0 bits (502), Expect = 8.9e-51
Identity = 116/217 (53.46%), Postives = 149/217 (68.66%), Query Frame = 0


Query: 2   DSFGNDCMNYFGSDIFIPTEELD---SWGFDEPVSGYYDSSSPEGVLSSSSATKNIASER 61
           D    +  NY+    F+  E+ +   SW  +E +SG YDSSSP+G  +SS A+KNI SER
Sbjct: 3   DIVDQELSNYWEPSSFLQNEDFEYDRSWPLEEAISGSYDSSSPDGA-ASSPASKNIVSER 62

Query: 62  NRRRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKI 121
           NRR+KLN+RLFALRSVVPNITKMDKASIIKDAI YI+ L  +E++++ EI ELES     
Sbjct: 63  NRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKSS 122

Query: 122 TGCEFDQEIPLLLRPKRKKTEKYFSYGSPASRTSPIEVQDLSVTYMGGRTLAVSMTCCKR 181
                D +  LL+    KK ++  S     S TS IEV +L VT+MG RT+ VS+TC KR
Sbjct: 123 LSFSKDFDRDLLVPVTSKKMKQLDS----GSSTSLIEVLELKVTFMGERTMVVSVTCNKR 182

Query: 182 ADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIE 216
            D+MVKLCEVFESL LKI+T+N+++ SG +  TVFIE
Sbjct: 183 TDTMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIE 214

[Close]

BLAST of Cp4.1LG18g06380 vs. TAIR 10
Match: AT4G29930.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.3e-49
Identity = 108/249 (43.37%), Postives = 161/249 (64.66%), Query Frame = 0


Query: 1   MDSFGNDCMNYFGSDIFIPTEEL--DSWGFDEPVSGYYDSSSPEGVLSSSSATKNIASER 60
           M+   ++  NY+ + +F   +EL  DSW  +E  SG  +SSSP+G  +S +++KN+ SER
Sbjct: 1   MEDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSER 60

Query: 61  NRRRKLNERLFALRSVVPNITKMDKASIIKDAIDYIQNLHEQERRVQTEISELESGKFKI 120
           NRR+KLN+RLFALRSVVPNI+K+DKAS+IKD+IDY+Q L +QE+ ++ EI ELES    +
Sbjct: 61  NRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLL 120

Query: 121 TG------CEFDQEIPLLLRPKRKKTEKYFSYGSPASRTS--PIEVQDLSVTYMGGRTLA 180
                   C F +              K F     ++R    PIEV ++ VT+MG +T+ 
Sbjct: 121 ENPVRDYDCNFAETHLQDFSDNNDMRSKKFKQMDYSTRVQHYPIEVLEMKVTWMGEKTVV 180

Query: 181 VSMTCCKRADSMVKLCEVFESLKLKIITANISAVSGRLLKTVFIEAEKEERDYLKIKIET 240
           V +TC K+ ++MV+LC+V ESL L I+T N S+ + RL  T+F++A++EE   ++ KI+ 
Sbjct: 181 VCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQADEEESSAVEAKIQM 240

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g06380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2HIV9	1.6e-57	52.67	Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1	[more]
Q700E3	7.4e-42	43.11	Transcription factor bHLH27 OS=Arabidopsis thaliana OX=3702 GN=BHLH27 PE=2 SV=1	[more]
Q0JEB7	2.9e-38	35.88	Transcription factor BHLH6 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH6 PE=...	[more]
Q9LSE2	3.8e-14	31.69	Transcription factor ICE1 OS=Arabidopsis thaliana OX=3702 GN=SCRM PE=1 SV=1	[more]
Q9LPW3	7.2e-13	31.35	Transcription factor SCREAM2 OS=Arabidopsis thaliana OX=3702 GN=SCRM2 PE=1 SV=1	[more]

BLAST of Cp4.1LG18g06380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515836.1	8.22e-168	100.00	transcription factor bHLH35-like [Cucurbita pepo subsp. pepo]	[more]
XP_022922024.1	2.26e-165	98.36	transcription factor bHLH35-like [Cucurbita moschata] >KAG6589686.1 Transcriptio...	[more]
XP_022987353.1	1.31e-164	97.95	transcription factor bHLH35-like [Cucurbita maxima]	[more]
XP_038878728.1	3.28e-128	81.71	transcription factor bHLH35-like isoform X1 [Benincasa hispida]	[more]
XP_022135507.1	3.48e-126	80.57	transcription factor bHLH35-like [Momordica charantia]	[more]

BLAST of Cp4.1LG18g06380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E262	1.09e-165	98.36	transcription factor bHLH35-like OS=Cucurbita moschata OX=3662 GN=LOC111430100 P...	[more]
A0A6J1JJ79	6.33e-165	97.95	transcription factor bHLH35-like OS=Cucurbita maxima OX=3661 GN=LOC111484933 PE=...	[more]
A0A6J1C2W6	1.69e-126	80.57	transcription factor bHLH35-like OS=Momordica charantia OX=3673 GN=LOC111007447 ...	[more]
A0A1S3BWL7	1.21e-124	80.49	transcription factor bHLH35 OS=Cucumis melo OX=3656 GN=LOC103494233 PE=4 SV=1	[more]
A0A0A0LU95	1.35e-124	80.49	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G425940 PE=4 S...	[more]

BLAST of Cp4.1LG18g06380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57150.1	1.8e-59	53.72	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G57150.3	8.9e-51	53.46	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G57150.2	8.9e-51	53.46	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G57150.4	8.9e-51	53.46	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G29930.1	1.3e-49	43.37	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	PANTHER	PTHR31945:SF26	TRANSCRIPTION FACTOR BHLH35	coord: 8..238
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 8..238
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 54..103 e-value: 1.7E-15 score: 67.5
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 52..98 e-value: 4.7E-12 score: 45.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 48..97 score: 16.659607
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 46..114 e-value: 7.6E-17 score: 63.0
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 52..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g06380.1	Cp4.1LG18g06380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0043565	sequence-specific DNA binding